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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT1G72740

Z-value: 2.30

Transcription factors associated with AT1G72740

Gene Symbol Gene ID Gene Info
AT1G72740
AT1G72740 Homeodomain-like/winged-helix DNA-binding family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT1G72740arTal_v1_Chr1_-_27382924_273829240.173.8e-01Click!

Activity profile of AT1G72740 motif

Sorted Z-values of AT1G72740 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr1_-_11668690_11668690 3.28 AT1G32350.1
AT1G32350.2
AOX1D
alternative oxidase 1D
arTal_v1_Chr3_-_1136397_1136397 2.85 AT3G04290.1
LTL1
Li-tolerant lipase 1
arTal_v1_Chr3_+_16297979_16297979 2.68 AT3G44750.2
HDA3
histone deacetylase 3
arTal_v1_Chr2_+_7190937_7190937 2.68 AT2G16586.1
AT2G16586
transmembrane protein
arTal_v1_Chr2_+_1025_1025 2.68 AT2G01008.1
AT2G01008
maternal effect embryo arrest protein
arTal_v1_Chr5_+_9540861_9540861 2.64 AT5G27120.1
AT5G27120
NOP56-like pre RNA processing ribonucleoprotein
arTal_v1_Chr1_-_17983377_17983377 2.64 AT1G48630.1
RACK1B_AT
receptor for activated C kinase 1B
arTal_v1_Chr3_+_16163709_16163850 2.61 AT3G44590.1
AT3G44590.2
AT3G44590
60S acidic ribosomal protein family
arTal_v1_Chr3_+_16297656_16297656 2.60 AT3G44750.1
HDA3
histone deacetylase 3
arTal_v1_Chr4_+_8020951_8020951 2.60 AT4G13850.2
AT4G13850.4
AT4G13850.3
GR-RBP2
glycine-rich RNA-binding protein 2
arTal_v1_Chr3_-_14196865_14196865 2.42 AT3G41762.1
AT3G41762
hypothetical protein
arTal_v1_Chr3_-_21156075_21156075 2.37 AT3G57150.1
NAP57
homologue of NAP57
arTal_v1_Chr5_-_26531176_26531176 2.35 AT5G66440.1
AT5G66440
tRNA-methyltransferase non-catalytic subunit trm6MTase subunit
arTal_v1_Chr1_-_27114399_27114399 2.28 AT1G72040.1
dNK
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr3_-_19699392_19699392 2.28 AT3G53150.1
UGT73D1
UDP-glucosyl transferase 73D1
arTal_v1_Chr2_+_15110492_15110492 2.27 AT2G35980.1
YLS9
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
arTal_v1_Chr3_-_2232361_2232361 2.20 AT3G07050.1
NSN1
GTP-binding family protein
arTal_v1_Chr3_-_6212551_6212551 2.15 AT3G18130.1
RACK1C_AT
receptor for activated C kinase 1C
arTal_v1_Chr2_-_18250779_18250779 2.15 AT2G44120.2
AT2G44120
Ribosomal protein L30/L7 family protein
arTal_v1_Chr2_+_6542166_6542166 2.13 AT2G15090.1
KCS8
3-ketoacyl-CoA synthase 8
arTal_v1_Chr4_-_12962699_12962771 2.09 AT4G25340.2
AT4G25340.1
FKBP53
FK506 BINDING PROTEIN 53
arTal_v1_Chr2_+_11816634_11816634 2.09 AT2G27710.2
AT2G27710.4
AT2G27710.1
AT2G27710
60S acidic ribosomal protein family
arTal_v1_Chr2_-_9767_9767 2.08 AT2G01023.1
AT2G01023
hypothetical protein
arTal_v1_Chr1_+_18098081_18098081 2.07 AT1G48920.1
NUC-L1
nucleolin like 1
arTal_v1_Chr4_+_11269985_11270040 2.07 AT4G21120.1
AT4G21120.2
AAT1
amino acid transporter 1
arTal_v1_Chr2_+_11816791_11816791 2.04 AT2G27710.3
AT2G27710
60S acidic ribosomal protein family
arTal_v1_Chr2_-_18251156_18251156 2.02 AT2G44120.1
AT2G44120
Ribosomal protein L30/L7 family protein
arTal_v1_Chr3_-_20808051_20808168 2.01 AT3G56070.2
AT3G56070.1
ROC2
rotamase cyclophilin 2
arTal_v1_Chr4_-_6464544_6464558 1.97 AT4G10450.2
AT4G10450.1
AT4G10450
Ribosomal protein L6 family
arTal_v1_Chr1_-_6378580_6378580 1.96 AT1G18540.1
AT1G18540
Ribosomal protein L6 family protein
arTal_v1_Chr3_+_5708826_5708826 1.96 AT3G16780.1
AT3G16780
Ribosomal protein L19e family protein
arTal_v1_Chr1_-_20986952_20986952 1.95 AT1G56110.1
NOP56
NOP56-like pre RNA processing ribonucleoprotein
arTal_v1_Chr4_-_6479165_6479171 1.92 AT4G10480.2
AT4G10480.1
AT4G10480
Nascent polypeptide-associated complex (NAC), alpha subunit family protein
arTal_v1_Chr3_-_1010573_1010573 1.91 AT3G03920.1
AT3G03920
H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein
arTal_v1_Chr1_+_24839090_24839090 1.88 AT1G66580.1
SAG24
senescence associated gene 24
arTal_v1_Chr5_+_23619459_23619459 1.87 AT5G58420.1
AT5G58420
Ribosomal protein S4 (RPS4A) family protein
arTal_v1_Chr3_+_2953693_2953737 1.81 AT3G09630.1
AT3G09630.2
AT3G09630
Ribosomal protein L4/L1 family
arTal_v1_Chr5_+_15903279_15903315 1.80 AT5G39740.1
AT5G39740.2
RPL5B
ribosomal protein L5 B
arTal_v1_Chr2_-_16856771_16856771 1.79 AT2G40360.2
AT2G40360.1
AT2G40360
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr4_-_13106864_13106864 1.79 AT4G25730.1
AT4G25730
FtsJ-like methyltransferase family protein
arTal_v1_Chr3_+_19503153_19503153 1.78 AT3G52580.1
AT3G52580
Ribosomal protein S11 family protein
arTal_v1_Chr5_-_24381599_24381599 1.78 AT5G60670.1
AT5G60670
Ribosomal protein L11 family protein
arTal_v1_Chr1_-_8855874_8855874 1.76 AT1G25260.1
AT1G25260
Ribosomal protein L10 family protein
arTal_v1_Chr2_+_1008460_1008460 1.75 AT2G03330.1
AT2G03330
transmembrane protein
arTal_v1_Chr3_+_18504164_18504164 1.75 AT3G49910.1
AT3G49910
Translation protein SH3-like family protein
arTal_v1_Chr4_-_18275017_18275216 1.73 AT4G39260.4
AT4G39260.3
AT4G39260.2
AT4G39260.1
CCR1
cold, circadian rhythm, and RNA binding 1
arTal_v1_Chr2_-_15620156_15620156 1.72 AT2G37190.1
AT2G37190
Ribosomal protein L11 family protein
arTal_v1_Chr5_+_7328870_7328870 1.71 AT5G22100.1
AT5G22100
RNA cyclase family protein
arTal_v1_Chr2_-_10127589_10127589 1.71 AT2G23790.1
AT2G23790
calcium uniporter (DUF607)
arTal_v1_Chr3_-_9271400_9271465 1.71 AT3G25520.2
AT3G25520.3
AT3G25520.1
ATL5
ribosomal protein L5
arTal_v1_Chr1_+_3106367_3106367 1.70 AT1G09590.1
AT1G09590
Translation protein SH3-like family protein
arTal_v1_Chr4_-_10036647_10036647 1.69 AT4G18100.1
AT4G18100
Ribosomal protein L32e
arTal_v1_Chr4_+_8020713_8020713 1.69 AT4G13850.1
GR-RBP2
glycine-rich RNA-binding protein 2
arTal_v1_Chr5_-_24456115_24456115 1.68 AT5G60790.1
ABCF1
ABC transporter family protein
arTal_v1_Chr1_-_22719535_22719535 1.68 AT1G61570.1
TIM13
translocase of the inner mitochondrial membrane 13
arTal_v1_Chr1_-_6483646_6483646 1.67 AT1G18800.1
NRP2
NAP1-related protein 2
arTal_v1_Chr2_-_14716634_14716634 1.67 AT2G34880.1
MEE27
Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
arTal_v1_Chr5_-_2633850_2633890 1.67 AT5G08180.2
AT5G08180.1
AT5G08180
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
arTal_v1_Chr5_-_24984044_24984044 1.66 AT5G62190.1
PRH75
DEAD box RNA helicase (PRH75)
arTal_v1_Chr3_-_8017508_8017508 1.66 AT3G22660.1
AT3G22660
rRNA processing protein-like protein
arTal_v1_Chr5_+_16801707_16801707 1.66 AT5G42010.2
AT5G42010.1
AT5G42010
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr5_+_25444575_25444613 1.65 AT5G63550.1
AT5G63550.2
AT5G63550
DEK domain-containing chromatin associated protein
arTal_v1_Chr3_+_3285832_3285832 1.65 AT3G10530.1
AT3G10530
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr5_+_24126877_24126877 1.64 AT5G59910.1
HTB4
Histone superfamily protein
arTal_v1_Chr1_-_26621779_26621779 1.63 AT1G70600.1
AT1G70600
Ribosomal protein L18e/L15 superfamily protein
arTal_v1_Chr5_-_26559448_26559452 1.62 AT5G66540.2
AT5G66540.1
AT5G66540
U3 small nucleolar ribonucleoprotein
arTal_v1_Chr3_+_1614178_1614215 1.61 AT3G05560.1
AT3G05560.2
AT3G05560.3
AT3G05560
Ribosomal L22e protein family
arTal_v1_Chr5_+_5268421_5268421 1.61 AT5G16130.1
AT5G16130
Ribosomal protein S7e family protein
arTal_v1_Chr4_+_14215473_14215473 1.61 AT4G28780.1
AT4G28780
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr3_+_7887276_7887286 1.60 AT3G22310.1
AT3G22310.2
PMH1
putative mitochondrial RNA helicase 1
arTal_v1_Chr2_-_17461539_17461539 1.60 AT2G41840.1
AT2G41840
Ribosomal protein S5 family protein
arTal_v1_Chr2_+_18831130_18831130 1.59 AT2G45710.1
AT2G45710
Zinc-binding ribosomal protein family protein
arTal_v1_Chr1_+_6222201_6222201 1.59 AT1G18080.1
ATARCA
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr5_-_9635174_9635174 1.58 AT5G27330.1
AT5G27330
Prefoldin chaperone subunit family protein
arTal_v1_Chr3_+_1329571_1329571 1.58 AT3G04840.1
AT3G04840
Ribosomal protein S3Ae
arTal_v1_Chr4_+_14166094_14166094 1.58 AT4G28703.1
AT4G28703
RmlC-like cupins superfamily protein
arTal_v1_Chr2_-_16792622_16792622 1.58 AT2G40205.1
AT2G40205
Ribosomal protein L41 family
arTal_v1_Chr3_+_3521329_3521329 1.57 AT3G11250.1
AT3G11250
Ribosomal protein L10 family protein
arTal_v1_Chr5_-_1580875_1580875 1.57 AT5G05340.1
PRX52
Peroxidase superfamily protein
arTal_v1_Chr1_-_4740842_4740842 1.56 AT1G13830.2
AT1G13830
Carbohydrate-binding X8 domain superfamily protein
arTal_v1_Chr2_-_11764785_11764935 1.56 AT2G27530.2
AT2G27530.1
PGY1
Ribosomal protein L1p/L10e family
arTal_v1_Chr5_-_9000345_9000345 1.55 AT5G25820.1
AT5G25820
Exostosin family protein
arTal_v1_Chr5_-_23124513_23124594 1.55 AT5G57120.1
AT5G57120.2
AT5G57120
nucleolar/coiled-body phosphoprotein
arTal_v1_Chr1_-_5166939_5166939 1.55 AT1G14980.1
AT1G14980.2
CPN10
chaperonin 10
arTal_v1_Chr3_-_1416056_1416056 1.54 AT3G05060.1
AT3G05060
NOP56-like pre RNA processing ribonucleoprotein
arTal_v1_Chr5_+_4213955_4213955 1.54 AT5G13210.1
AT5G13210
Uncharacterized conserved protein UCP015417, vWA
arTal_v1_Chr1_+_8262925_8262925 1.54 AT1G23290.1
RPL27AB
Ribosomal protein L18e/L15 superfamily protein
arTal_v1_Chr4_+_8571816_8571833 1.54 AT4G15000.1
AT4G15000.2
AT4G15000
Ribosomal L27e protein family
arTal_v1_Chr4_-_1075893_1075930 1.54 AT4G02450.2
AT4G02450.1
AT4G02450
HSP20-like chaperones superfamily protein
arTal_v1_Chr5_-_6583248_6583248 1.53 AT5G19510.1
AT5G19510
Translation elongation factor EF1B/ribosomal protein S6 family protein
arTal_v1_Chr1_-_28951655_28951655 1.53 AT1G77030.1
AT1G77030
putative DEAD-box ATP-dependent RNA helicase 29
arTal_v1_Chr3_-_20791163_20791163 1.53 AT3G56020.1
AT3G56020
Ribosomal protein L41 family
arTal_v1_Chr5_+_22686832_22686832 1.53 AT5G56030.2
HSP81-2
heat shock protein 81-2
arTal_v1_Chr3_-_57541_57541 1.52 AT3G01160.1
AT3G01160
pre-rRNA-processing ESF1-like protein
arTal_v1_Chr1_+_474373_474373 1.52 AT1G02370.1
AT1G02370
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr5_-_16135347_16135393 1.52 AT5G40340.2
AT5G40340.1
AT5G40340
Tudor/PWWP/MBT superfamily protein
arTal_v1_Chr2_-_16451878_16451878 1.52 AT2G39390.1
AT2G39390
Ribosomal L29 family protein
arTal_v1_Chr3_+_8668772_8668772 1.51 AT3G23990.1
HSP60
heat shock protein 60
arTal_v1_Chr5_+_22686473_22686473 1.51 AT5G56030.1
HSP81-2
heat shock protein 81-2
arTal_v1_Chr1_-_29778016_29778016 1.51 AT1G79150.1
AT1G79150
binding protein
arTal_v1_Chr4_-_846792_846814 1.49 AT4G01950.1
AT4G01950.2
GPAT3
glycerol-3-phosphate acyltransferase 3
arTal_v1_Chr4_+_16548600_16548600 1.49 AT4G34670.1
AT4G34670
Ribosomal protein S3Ae
arTal_v1_Chr3_-_3779467_3779545 1.49 AT3G11940.1
AT3G11940.2
RPS5A
ribosomal protein 5A
arTal_v1_Chr4_+_2238370_2238373 1.48 AT4G04500.2
AT4G04500.3
AT4G04500.1
CRK37
cysteine-rich RLK (RECEPTOR-like protein kinase) 37
arTal_v1_Chr4_+_15000960_15000960 1.48 AT4G30800.1
AT4G30800
Nucleic acid-binding, OB-fold-like protein
arTal_v1_Chr3_+_5454762_5454762 1.47 AT3G16080.1
AT3G16080.2
AT3G16080
Zinc-binding ribosomal protein family protein
arTal_v1_Chr1_+_17798979_17798979 1.47 AT1G48210.5
AT1G48210.7
AT1G48210.4
AT1G48210.6
AT1G48210
Protein kinase superfamily protein
arTal_v1_Chr1_-_4741189_4741189 1.46 AT1G13830.1
AT1G13830
Carbohydrate-binding X8 domain superfamily protein
arTal_v1_Chr5_-_6805195_6805226 1.46 AT5G20160.2
AT5G20160.3
AT5G20160.1
AT5G20160
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
arTal_v1_Chr2_+_18099236_18099236 1.45 AT2G43650.1
EMB2777
Sas10/U3 ribonucleoprotein (Utp) family protein
arTal_v1_Chr1_+_16266553_16266773 1.44 AT1G43170.1
AT1G43170.5
AT1G43170.8
AT1G43170.7
AT1G43170.9
AT1G43170.6
AT1G43170.4
AT1G43170.2
AT1G43170.3
RP1
ribosomal protein 1
arTal_v1_Chr3_+_21711445_21711445 1.44 AT3G58700.1
AT3G58700
Ribosomal L5P family protein
arTal_v1_Chr3_-_2825114_2825241 1.43 AT3G09200.2
AT3G09200.1
AT3G09200
Ribosomal protein L10 family protein
arTal_v1_Chr5_-_6090761_6090804 1.43 AT5G18380.2
AT5G18380.3
AT5G18380.1
AT5G18380
Ribosomal protein S5 domain 2-like superfamily protein
arTal_v1_Chr1_+_11343854_11343854 1.42 AT1G31690.1
AT1G31690
Copper amine oxidase family protein
arTal_v1_Chr2_+_13450241_13450241 1.41 AT2G31610.1
AT2G31610
Ribosomal protein S3 family protein
arTal_v1_Chr1_-_24314620_24314639 1.41 AT1G65440.3
AT1G65440.4
AT1G65440.2
AT1G65440.1
GTB1
global transcription factor group B1
arTal_v1_Chr4_+_7453196_7453201 1.41 AT4G12600.1
AT4G12600.2
AT4G12600
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
arTal_v1_Chr2_-_14534239_14534239 1.41 AT2G34480.1
AT2G34480
Ribosomal protein L18ae/LX family protein
arTal_v1_Chr2_-_14534409_14534409 1.41 AT2G34480.2
AT2G34480
Ribosomal protein L18ae/LX family protein
arTal_v1_Chr2_+_19394106_19394106 1.40 AT2G47240.4
LACS1
AMP-dependent synthetase and ligase family protein
arTal_v1_Chr1_-_28020049_28020059 1.40 AT1G74560.3
AT1G74560.1
NRP1
NAP1-related protein 1
arTal_v1_Chr2_+_19393584_19393584 1.39 AT2G47240.3
LACS1
AMP-dependent synthetase and ligase family protein
arTal_v1_Chr1_+_4888114_4888214 1.39 AT1G14320.1
AT1G14320.2
SAC52
Ribosomal protein L16p/L10e family protein
arTal_v1_Chr2_+_7928015_7928015 1.39 AT2G18220.1
AT2G18220
Noc2p family
arTal_v1_Chr2_-_19330197_19330197 1.39 AT2G47040.1
VGD1
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr5_+_25908247_25908247 1.38 AT5G64810.1
WRKY51
WRKY DNA-binding protein 51
arTal_v1_Chr5_+_2794388_2794388 1.38 AT5G08620.1
STRS2
DEA(D/H)-box RNA helicase family protein
arTal_v1_Chr4_-_7686873_7687006 1.38 AT4G13250.2
AT4G13250.1
NYC1
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr4_+_994726_994726 1.37 AT4G02280.1
SUS3
sucrose synthase 3
arTal_v1_Chr3_-_7844597_7844597 1.37 AT3G22230.1
AT3G22230
Ribosomal L27e protein family
arTal_v1_Chr3_+_6453303_6453303 1.36 AT3G18740.1
RLK902
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
arTal_v1_Chr3_+_9064525_9064525 1.36 AT3G24830.1
AT3G24830
Ribosomal protein L13 family protein
arTal_v1_Chr3_-_9898006_9898006 1.36 AT3G26850.2
AT3G26850.1
AT3G26850
histone-lysine N-methyltransferase
arTal_v1_Chr1_-_9316880_9316880 1.36 AT1G26880.1
AT1G26880
Ribosomal protein L34e superfamily protein
arTal_v1_Chr5_+_20090648_20090648 1.35 AT5G49520.1
WRKY48
WRKY DNA-binding protein 48
arTal_v1_Chr1_+_24342483_24342483 1.35 AT1G65483.1
AT1G65483
hypothetical protein
arTal_v1_Chr5_-_16610692_16610692 1.35 AT5G41520.1
AT5G41520.2
RPS10B
RNA binding Plectin/S10 domain-containing protein
arTal_v1_Chr5_-_4936408_4936429 1.34 AT5G15200.2
AT5G15200.1
AT5G15200
Ribosomal protein S4
arTal_v1_Chr3_+_541708_541800 1.34 AT3G02560.1
AT3G02560.2
AT3G02560.3
AT3G02560
Ribosomal protein S7e family protein
arTal_v1_Chr1_+_17798431_17798628 1.34 AT1G48210.1
AT1G48210.2
AT1G48210.3
AT1G48210
Protein kinase superfamily protein
arTal_v1_Chr5_+_4533131_4533131 1.33 AT5G14050.1
AT5G14050
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr1_-_2067323_2067483 1.33 AT1G06720.1
AT1G06720.3
AT1G06720.2
AT1G06720
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr4_-_9715648_9715648 1.33 AT4G17390.1
AT4G17390
Ribosomal protein L23/L15e family protein
arTal_v1_Chr4_+_12918222_12918222 1.32 AT4G25210.1
AT4G25210
DNA-binding storekeeper protein-related transcriptional regulator
arTal_v1_Chr3_-_19213709_19213776 1.31 AT3G51800.2
AT3G51800.1
AT3G51800.3
ATG2
metallopeptidase M24 family protein
arTal_v1_Chr1_-_9318277_9318277 1.31 AT1G26880.2
AT1G26880
Ribosomal protein L34e superfamily protein
arTal_v1_Chr3_+_1621355_1621405 1.31 AT3G05590.1
AT3G05590.2
AT3G05590.3
RPL18
ribosomal protein L18
arTal_v1_Chr2_+_19344635_19344635 1.30 AT2G47110.2
AT2G47110.1
UBQ6
ubiquitin 6
arTal_v1_Chr1_+_8314853_8314853 1.30 AT1G23410.1
AT1G23410
Ribosomal protein S27a / Ubiquitin family protein
arTal_v1_Chr4_-_347191_347293 1.30 AT4G00810.1
AT4G00810.2
AT4G00810
60S acidic ribosomal protein family
arTal_v1_Chr1_+_18870059_18870059 1.29 AT1G50920.1
AT1G50920
Nucleolar GTP-binding protein
arTal_v1_Chr5_-_6202166_6202168 1.29 AT5G18620.2
AT5G18620.1
CHR17
chromatin remodeling factor17
arTal_v1_Chr2_+_19392744_19392744 1.28 AT2G47240.2
LACS1
AMP-dependent synthetase and ligase family protein
arTal_v1_Chr5_-_10070899_10070899 1.28 AT5G28060.1
AT5G28060
Ribosomal protein S24e family protein
arTal_v1_Chr2_+_19392497_19392497 1.27 AT2G47240.1
LACS1
AMP-dependent synthetase and ligase family protein
arTal_v1_Chr2_+_15169818_15169818 1.27 AT2G36160.1
AT2G36160
Ribosomal protein S11 family protein
arTal_v1_Chr2_+_8575785_8575785 1.27 AT2G19870.1
AT2G19870
tRNA/rRNA methyltransferase (SpoU) family protein
arTal_v1_Chr1_+_22628264_22628409 1.27 AT1G61340.1
AT1G61340.2
FBS1
F-box family protein
arTal_v1_Chr3_+_20500234_20500402 1.27 AT3G55280.1
AT3G55280.3
AT3G55280.2
RPL23AB
ribosomal protein L23AB
arTal_v1_Chr3_-_3806626_3806743 1.27 AT3G11964.1
AT3G11964.2
AT3G11964
RIBOSOMAL RNA PROCESSING 5
arTal_v1_Chr5_+_21661444_21661444 1.26 AT5G53400.1
BOB1
HSP20-like chaperones superfamily protein
arTal_v1_Chr4_-_17044555_17044599 1.26 AT4G36020.3
AT4G36020.1
AT4G36020.2
CSDP1
cold shock domain protein 1
arTal_v1_Chr5_+_25756272_25756272 1.25 AT5G64420.1
AT5G64420
DNA polymerase V family
arTal_v1_Chr3_+_22268688_22268688 1.25 AT3G60245.1
AT3G60245
Zinc-binding ribosomal protein family protein
arTal_v1_Chr1_-_12371554_12371554 1.25 AT1G34030.1
AT1G34030
Ribosomal protein S13/S18 family
arTal_v1_Chr1_-_6506542_6506542 1.25 AT1G18850.1
AT1G18850
hypothetical protein
arTal_v1_Chr3_+_22611521_22611521 1.24 AT3G61110.1
RS27A
ribosomal protein S27
arTal_v1_Chr1_-_19476234_19476234 1.23 AT1G52300.1
AT1G52300
Zinc-binding ribosomal protein family protein
arTal_v1_Chr4_+_17524461_17524461 1.23 AT4G37240.1
AT4G37240
HTH-type transcriptional regulator
arTal_v1_Chr5_+_5141035_5141035 1.23 AT5G15750.1
AT5G15750
Alpha-L RNA-binding motif/Ribosomal protein S4 family protein
arTal_v1_Chr1_-_25095526_25095638 1.22 AT1G67120.2
AT1G67120.1
AT1G67120
midasin-like protein
arTal_v1_Chr5_-_16317291_16317291 1.22 AT5G40770.1
PHB3
prohibitin 3
arTal_v1_Chr5_-_6722477_6722477 1.22 AT5G19880.1
AT5G19880
Peroxidase superfamily protein
arTal_v1_Chr3_-_10904458_10904458 1.21 AT3G28900.1
AT3G28900
Ribosomal protein L34e superfamily protein
arTal_v1_Chr1_+_4484584_4484584 1.21 AT1G13160.1
AT1G13160
ARM repeat superfamily protein
arTal_v1_Chr5_-_694515_694515 1.21 AT5G02960.1
AT5G02960
Ribosomal protein S12/S23 family protein
arTal_v1_Chr3_-_19810520_19810520 1.21 AT3G53430.1
AT3G53430
Ribosomal protein L11 family protein
arTal_v1_Chr2_-_19326484_19326484 1.20 AT2G47030.1
VGDH1
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr2_-_9002905_9002908 1.20 AT2G20940.2
AT2G20940.1
AT2G20940
transmembrane protein, putative (DUF1279)
arTal_v1_Chr5_-_26938498_26938498 1.18 AT5G67510.1
AT5G67510
Translation protein SH3-like family protein
arTal_v1_Chr3_-_1624819_1624852 1.18 AT3G05600.2
AT3G05600.1
AT3G05600
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr3_-_18196784_18196784 1.18 AT3G49080.1
AT3G49080
Ribosomal protein S5 domain 2-like superfamily protein
arTal_v1_Chr3_+_7644265_7644475 1.18 AT3G21700.3
AT3G21700.1
AT3G21700.2
SGP2
Ras-related small GTP-binding family protein
arTal_v1_Chr1_-_23667372_23667372 1.18 AT1G63780.1
IMP4
Ribosomal RNA processing Brix domain protein
arTal_v1_Chr3_+_20578922_20578922 1.18 AT3G55510.1
AT3G55510.2
RBL
Noc2p family
arTal_v1_Chr1_-_167842_167842 1.17 AT1G01453.2
AT1G01453
late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr4_+_10838310_10838310 1.17 AT4G20000.1
AT4G20000
VQ motif-containing protein
arTal_v1_Chr2_+_16474923_16474923 1.17 AT2G39460.1
RPL23AA
ribosomal protein L23AA
arTal_v1_Chr3_+_691934_691934 1.17 AT3G03060.1
AT3G03060
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr2_+_16474149_16474149 1.16 AT2G39460.2
RPL23AA
ribosomal protein L23AA
arTal_v1_Chr3_+_19951424_19951424 1.16 AT3G53870.1
AT3G53870
Ribosomal protein S3 family protein
arTal_v1_Chr4_+_36916_36916 1.15 AT4G00100.1
RPS13A
ribosomal protein S13A
arTal_v1_Chr1_-_436922_436922 1.15 AT1G02230.1
NAC004
NAC domain containing protein 4
arTal_v1_Chr1_-_4443954_4443954 1.15 AT1G13020.1
EIF4B2
eukaryotic initiation factor 4B2
arTal_v1_Chr4_+_5923484_5923484 1.15 AT4G09320.1
NDPK1
nucleoside diphosphate kinase
arTal_v1_Chr1_+_24105611_24105611 1.15 AT1G64880.1
AT1G64880
Ribosomal protein S5 family protein
arTal_v1_Chr4_-_4205230_4205356 1.15 AT4G07410.1
AT4G07410.2
PCN
Transducin family protein / WD-40 repeat family protein
arTal_v1_Chr3_+_9541483_9541483 1.14 AT3G26110.1
AT3G26110
Anther-specific protein agp1-like protein
arTal_v1_Chr4_-_6952479_6952479 1.14 AT4G11420.1
EIF3A
eukaryotic translation initiation factor 3A

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G72740

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.3 4.0 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
1.1 6.4 GO:0072344 rescue of stalled ribosome(GO:0072344)
0.7 2.1 GO:1990884 rRNA acetylation involved in maturation of SSU-rRNA(GO:1904812) rRNA acetylation(GO:1990882) RNA acetylation(GO:1990884)
0.7 23.1 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.7 2.1 GO:0015802 basic amino acid transport(GO:0015802)
0.6 1.9 GO:0002188 translation reinitiation(GO:0002188)
0.6 2.8 GO:0010226 response to lithium ion(GO:0010226)
0.6 6.7 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.5 4.0 GO:0000478 endonucleolytic cleavage involved in rRNA processing(GO:0000478)
0.4 4.8 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.4 1.3 GO:0016237 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) single-organism membrane invagination(GO:1902534)
0.4 1.7 GO:0070509 calcium ion import(GO:0070509)
0.4 1.3 GO:0048833 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.4 1.3 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.4 1.7 GO:0043954 cellular component maintenance(GO:0043954) chromatin maintenance(GO:0070827)
0.4 1.6 GO:0045604 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.4 2.4 GO:0031118 rRNA pseudouridine synthesis(GO:0031118)
0.4 1.6 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.4 15.5 GO:0042273 ribosomal large subunit biogenesis(GO:0042273)
0.4 3.1 GO:0016444 somatic cell DNA recombination(GO:0016444)
0.4 1.1 GO:0061014 positive regulation of mRNA catabolic process(GO:0061014)
0.4 1.1 GO:0045948 positive regulation of translational initiation(GO:0045948)
0.3 2.8 GO:0045903 positive regulation of translational fidelity(GO:0045903)
0.3 1.0 GO:0097033 respiratory chain complex III assembly(GO:0017062) mitochondrial respiratory chain complex III assembly(GO:0034551) mitochondrial respiratory chain complex III biogenesis(GO:0097033)
0.3 1.0 GO:0010377 guard cell fate commitment(GO:0010377) regulation of G1/S transition of mitotic cell cycle(GO:2000045) regulation of genetic imprinting(GO:2000653)
0.3 2.9 GO:0010230 alternative respiration(GO:0010230)
0.3 8.4 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.3 1.2 GO:0000491 small nucleolar ribonucleoprotein complex assembly(GO:0000491)
0.3 0.6 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.3 0.8 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.3 0.8 GO:1903513 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.3 0.8 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.3 1.1 GO:0035308 negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
0.3 1.0 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.3 6.7 GO:0009294 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.2 8.1 GO:0006414 translational elongation(GO:0006414)
0.2 0.5 GO:0034724 DNA replication-independent nucleosome organization(GO:0034724)
0.2 8.7 GO:0042274 ribosomal small subunit biogenesis(GO:0042274)
0.2 1.7 GO:2000779 regulation of double-strand break repair(GO:2000779)
0.2 2.2 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.2 1.5 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.2 0.7 GO:0090213 regulation of radial pattern formation(GO:0090213)
0.2 1.5 GO:0032957 inositol trisphosphate metabolic process(GO:0032957)
0.2 1.3 GO:1900036 positive regulation of cellular response to heat(GO:1900036)
0.2 1.1 GO:0000393 spliceosomal conformational changes to generate catalytic conformation(GO:0000393)
0.2 0.6 GO:0009211 nucleoside triphosphate catabolic process(GO:0009143) pyrimidine deoxyribonucleoside triphosphate metabolic process(GO:0009211) pyrimidine deoxyribonucleotide metabolic process(GO:0009219) pyrimidine deoxyribonucleotide biosynthetic process(GO:0009221) deoxyribonucleotide catabolic process(GO:0009264) 2'-deoxyribonucleotide biosynthetic process(GO:0009265) deoxyribose phosphate biosynthetic process(GO:0046385)
0.2 0.6 GO:0006425 glutamyl-tRNA aminoacylation(GO:0006424) glutaminyl-tRNA aminoacylation(GO:0006425)
0.2 0.8 GO:0002164 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.2 0.8 GO:0006182 cGMP biosynthetic process(GO:0006182) cGMP metabolic process(GO:0046068)
0.2 0.9 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603)
0.2 7.8 GO:0002181 cytoplasmic translation(GO:0002181)
0.2 0.6 GO:0071763 nuclear membrane organization(GO:0071763)
0.2 1.3 GO:0019079 viral genome replication(GO:0019079)
0.2 1.9 GO:0010098 suspensor development(GO:0010098)
0.2 0.7 GO:0010185 regulation of cellular defense response(GO:0010185)
0.2 1.0 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.2 1.2 GO:0071731 response to nitric oxide(GO:0071731)
0.2 1.6 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.2 0.9 GO:0010452 histone H3-K36 methylation(GO:0010452)
0.2 0.7 GO:0050792 regulation of viral process(GO:0050792)
0.2 1.0 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.2 0.5 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
0.2 0.5 GO:0009945 radial axis specification(GO:0009945)
0.1 0.4 GO:0055047 generative cell mitosis(GO:0055047)
0.1 0.4 GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
0.1 0.7 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.1 0.7 GO:0010587 miRNA catabolic process(GO:0010587)
0.1 4.8 GO:0010143 cutin biosynthetic process(GO:0010143)
0.1 1.3 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.1 2.6 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.1 0.8 GO:0043407 negative regulation of MAP kinase activity(GO:0043407) negative regulation of MAPK cascade(GO:0043409)
0.1 0.4 GO:0048451 petal formation(GO:0048451)
0.1 0.6 GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity(GO:0043433)
0.1 1.1 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122)
0.1 0.5 GO:0001112 DNA-templated transcriptional open complex formation(GO:0001112) transcriptional open complex formation at RNA polymerase II promoter(GO:0001113) protein-DNA complex remodeling(GO:0001120) macromolecular complex remodeling(GO:0034367)
0.1 0.4 GO:1900364 negative regulation of mRNA 3'-end processing(GO:0031441) negative regulation of mRNA processing(GO:0050686) negative regulation of mRNA polyadenylation(GO:1900364) negative regulation of mRNA metabolic process(GO:1903312)
0.1 0.4 GO:1902464 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.1 4.3 GO:0006334 nucleosome assembly(GO:0006334)
0.1 0.7 GO:1902969 mitotic DNA replication(GO:1902969)
0.1 0.5 GO:1903321 negative regulation of protein modification by small protein conjugation or removal(GO:1903321)
0.1 0.5 GO:1902751 positive regulation of G2/M transition of mitotic cell cycle(GO:0010971) positive regulation of cell cycle G2/M phase transition(GO:1902751)
0.1 4.0 GO:0044744 protein import into nucleus(GO:0006606) protein targeting to nucleus(GO:0044744)
0.1 0.8 GO:0043270 positive regulation of ion transport(GO:0043270)
0.1 0.8 GO:0016973 poly(A)+ mRNA export from nucleus(GO:0016973)
0.1 0.4 GO:0060236 regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
0.1 0.8 GO:0006570 tyrosine metabolic process(GO:0006570)
0.1 4.0 GO:0000741 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.1 44.2 GO:0006412 translation(GO:0006412)
0.1 0.6 GO:0051095 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.1 0.3 GO:1901522 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.1 0.4 GO:0035264 multicellular organism growth(GO:0035264)
0.1 0.3 GO:0045911 positive regulation of DNA recombination(GO:0045911)
0.1 0.3 GO:0006369 termination of RNA polymerase II transcription(GO:0006369)
0.1 0.6 GO:0009920 cell plate formation involved in plant-type cell wall biogenesis(GO:0009920)
0.1 0.8 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.1 0.8 GO:0010821 regulation of mitochondrion organization(GO:0010821)
0.1 0.4 GO:0016598 protein arginylation(GO:0016598)
0.1 0.8 GO:0007231 osmosensory signaling pathway(GO:0007231)
0.1 0.4 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.1 0.7 GO:0035067 negative regulation of histone modification(GO:0031057) negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757)
0.1 1.4 GO:0006265 DNA topological change(GO:0006265)
0.1 0.4 GO:0097298 regulation of nucleus size(GO:0097298)
0.1 0.5 GO:0048455 stamen formation(GO:0048455)
0.1 1.6 GO:0006538 glutamate catabolic process(GO:0006538)
0.1 0.8 GO:0045910 regulation of DNA recombination(GO:0000018) negative regulation of DNA recombination(GO:0045910)
0.1 0.7 GO:0016926 protein desumoylation(GO:0016926)
0.1 0.5 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.1 1.1 GO:0051050 positive regulation of transport(GO:0051050)
0.1 0.6 GO:2001022 positive regulation of response to DNA damage stimulus(GO:2001022)
0.1 0.7 GO:0007021 tubulin complex assembly(GO:0007021)
0.1 0.9 GO:0016554 cytidine to uridine editing(GO:0016554)
0.1 0.4 GO:0080009 mRNA methylation(GO:0080009)
0.1 0.4 GO:0035964 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.1 3.6 GO:0051085 'de novo' posttranslational protein folding(GO:0051084) chaperone mediated protein folding requiring cofactor(GO:0051085)
0.1 0.2 GO:0030031 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
0.1 0.4 GO:1901562 response to paraquat(GO:1901562)
0.1 0.3 GO:0009304 tRNA transcription(GO:0009304)
0.1 0.2 GO:0044003 modification by symbiont of host morphology or physiology(GO:0044003)
0.1 0.5 GO:0006598 polyamine catabolic process(GO:0006598)
0.1 0.2 GO:0006056 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506) response to cobalt ion(GO:0032025)
0.1 0.8 GO:0018202 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.1 2.7 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.1 0.3 GO:0010219 regulation of vernalization response(GO:0010219)
0.1 0.3 GO:1900370 positive regulation of RNA interference(GO:1900370)
0.1 0.9 GO:0060321 acceptance of pollen(GO:0060321)
0.1 1.7 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.1 0.9 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.1 3.0 GO:0007031 peroxisome organization(GO:0007031)
0.1 0.9 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.1 0.3 GO:0034063 stress granule assembly(GO:0034063)
0.1 0.4 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.1 0.2 GO:0046037 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.1 0.2 GO:0043970 histone H3-K9 acetylation(GO:0043970)
0.1 0.6 GO:1902408 preprophase band assembly(GO:0000913) cytokinesis, site selection(GO:0007105) mitotic cytokinesis, site selection(GO:1902408)
0.1 0.2 GO:0070676 intralumenal vesicle formation(GO:0070676)
0.1 0.2 GO:0032877 positive regulation of DNA endoreduplication(GO:0032877) positive regulation of DNA-dependent DNA replication(GO:2000105)
0.1 0.2 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.1 0.6 GO:0043462 regulation of ATPase activity(GO:0043462)
0.1 0.8 GO:0043248 proteasome assembly(GO:0043248)
0.1 1.4 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.1 0.6 GO:0016574 histone ubiquitination(GO:0016574)
0.1 5.9 GO:0042254 ribosome biogenesis(GO:0042254)
0.1 2.4 GO:0006338 chromatin remodeling(GO:0006338)
0.1 0.3 GO:0051570 regulation of histone H3-K9 methylation(GO:0051570)
0.1 0.2 GO:0071258 cellular response to gravity(GO:0071258)
0.1 0.2 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.1 0.4 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.1 0.4 GO:0045898 regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045898) positive regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045899)
0.1 0.5 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.1 1.4 GO:0006613 cotranslational protein targeting to membrane(GO:0006613) SRP-dependent cotranslational protein targeting to membrane(GO:0006614)
0.1 1.3 GO:0051260 protein homooligomerization(GO:0051260)
0.0 0.4 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.0 0.2 GO:0010271 regulation of chlorophyll catabolic process(GO:0010271) regulation of tetrapyrrole catabolic process(GO:1901404)
0.0 0.9 GO:0046688 response to copper ion(GO:0046688)
0.0 0.5 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.0 0.2 GO:2000114 regulation of establishment of cell polarity(GO:2000114)
0.0 0.3 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.0 0.2 GO:0015866 ADP transport(GO:0015866) ATP transport(GO:0015867) AMP transport(GO:0080121)
0.0 0.3 GO:0034508 centromere complex assembly(GO:0034508)
0.0 0.4 GO:0006882 cellular zinc ion homeostasis(GO:0006882)
0.0 0.8 GO:1901068 guanosine-containing compound metabolic process(GO:1901068)
0.0 1.1 GO:0032508 DNA duplex unwinding(GO:0032508)
0.0 0.7 GO:0007064 mitotic sister chromatid cohesion(GO:0007064)
0.0 0.5 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.0 1.3 GO:0032784 regulation of DNA-templated transcription, elongation(GO:0032784)
0.0 0.3 GO:0006379 mRNA cleavage(GO:0006379)
0.0 0.3 GO:0000919 cell plate assembly(GO:0000919)
0.0 0.9 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.0 0.4 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 1.9 GO:0051607 defense response to virus(GO:0051607)
0.0 0.1 GO:0031086 nuclear-transcribed mRNA catabolic process, deadenylation-independent decay(GO:0031086) deadenylation-independent decapping of nuclear-transcribed mRNA(GO:0031087)
0.0 0.6 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.0 0.3 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 2.4 GO:0009124 nucleoside monophosphate biosynthetic process(GO:0009124)
0.0 0.1 GO:0015744 succinate transport(GO:0015744)
0.0 0.2 GO:2000144 regulation of transcription initiation from RNA polymerase II promoter(GO:0060260) positive regulation of transcription initiation from RNA polymerase II promoter(GO:0060261) positive regulation of DNA-templated transcription, initiation(GO:2000144)
0.0 0.7 GO:1902074 response to salt(GO:1902074)
0.0 0.3 GO:0046621 negative regulation of organ growth(GO:0046621)
0.0 1.3 GO:0006612 protein targeting to membrane(GO:0006612)
0.0 0.5 GO:0030497 fatty acid elongation(GO:0030497)
0.0 0.3 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.0 1.5 GO:0000381 regulation of alternative mRNA splicing, via spliceosome(GO:0000381)
0.0 1.1 GO:0070417 cellular response to cold(GO:0070417)
0.0 0.2 GO:0007095 mitotic G2 DNA damage checkpoint(GO:0007095) G2 DNA damage checkpoint(GO:0031572)
0.0 0.4 GO:0043901 negative regulation of multi-organism process(GO:0043901)
0.0 0.3 GO:1904666 regulation of ubiquitin protein ligase activity(GO:1904666) positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.0 1.0 GO:0048768 root hair cell tip growth(GO:0048768)
0.0 0.3 GO:0033683 nucleotide-excision repair, DNA incision(GO:0033683)
0.0 0.9 GO:0045787 positive regulation of cell cycle(GO:0045787)
0.0 0.1 GO:0032527 protein exit from endoplasmic reticulum(GO:0032527)
0.0 0.3 GO:0006333 chromatin assembly or disassembly(GO:0006333)
0.0 2.9 GO:0000398 mRNA splicing, via spliceosome(GO:0000398)
0.0 2.3 GO:0016579 protein deubiquitination(GO:0016579)
0.0 0.5 GO:0006904 vesicle docking involved in exocytosis(GO:0006904)
0.0 0.2 GO:0071244 cellular response to carbon dioxide(GO:0071244)
0.0 0.2 GO:1900426 positive regulation of defense response to bacterium(GO:1900426)
0.0 0.4 GO:0001522 pseudouridine synthesis(GO:0001522)
0.0 0.1 GO:0035461 thiamine pyrophosphate transport(GO:0030974) vitamin transmembrane transport(GO:0035461) azole transport(GO:0045117)
0.0 0.4 GO:0042793 transcription from plastid promoter(GO:0042793)
0.0 0.2 GO:0071490 cellular response to far red light(GO:0071490)
0.0 0.8 GO:0006289 nucleotide-excision repair(GO:0006289)
0.0 0.4 GO:0009612 response to mechanical stimulus(GO:0009612)
0.0 0.3 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.1 GO:0031848 protection from non-homologous end joining at telomere(GO:0031848)
0.0 1.1 GO:0034605 cellular response to heat(GO:0034605)
0.0 0.5 GO:0007030 Golgi organization(GO:0007030)
0.0 0.5 GO:0006833 water transport(GO:0006833) fluid transport(GO:0042044)
0.0 0.4 GO:0097031 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.0 0.1 GO:0070525 tRNA threonylcarbamoyladenosine metabolic process(GO:0070525)
0.0 1.0 GO:0006874 cellular calcium ion homeostasis(GO:0006874)
0.0 0.1 GO:0051668 localization within membrane(GO:0051668) COPII-coated vesicle budding(GO:0090114)
0.0 1.2 GO:0008380 RNA splicing(GO:0008380)
0.0 0.0 GO:0018195 peptidyl-arginine modification(GO:0018195)
0.0 0.4 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.0 0.3 GO:0000045 autophagosome assembly(GO:0000045) autophagosome organization(GO:1905037)
0.0 0.2 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.0 0.5 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 1.2 GO:0009809 lignin biosynthetic process(GO:0009809)
0.0 0.7 GO:0009958 positive gravitropism(GO:0009958)
0.0 0.9 GO:0010090 trichome morphogenesis(GO:0010090)
0.0 0.3 GO:0048826 cotyledon morphogenesis(GO:0048826)
0.0 0.7 GO:0010043 response to zinc ion(GO:0010043)
0.0 0.1 GO:0042276 error-prone translesion synthesis(GO:0042276)
0.0 0.9 GO:0030041 actin filament polymerization(GO:0030041)
0.0 0.1 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.0 0.0 GO:0051647 nuclear migration(GO:0007097) establishment of nucleus localization(GO:0040023) nucleus localization(GO:0051647)
0.0 0.1 GO:0010447 response to acidic pH(GO:0010447)
0.0 0.1 GO:0046209 nitric oxide metabolic process(GO:0046209)
0.0 0.3 GO:0019375 galactolipid biosynthetic process(GO:0019375)
0.0 0.3 GO:0007062 sister chromatid cohesion(GO:0007062)
0.0 0.9 GO:0010224 response to UV-B(GO:0010224)
0.0 0.3 GO:0006465 signal peptide processing(GO:0006465)
0.0 0.8 GO:0002239 response to oomycetes(GO:0002239)
0.0 0.1 GO:0007076 mitotic chromosome condensation(GO:0007076)
0.0 0.3 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.0 1.3 GO:0007005 mitochondrion organization(GO:0007005)
0.0 0.1 GO:0032456 endocytic recycling(GO:0032456)
0.0 0.1 GO:0030308 negative regulation of cell growth(GO:0030308)
0.0 0.4 GO:0006094 gluconeogenesis(GO:0006094)
0.0 0.2 GO:0080086 stamen filament development(GO:0080086)
0.0 0.3 GO:0006862 nucleotide transport(GO:0006862)
0.0 0.3 GO:0006995 cellular response to nitrogen starvation(GO:0006995)
0.0 0.8 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 3.3 GO:0009620 response to fungus(GO:0009620)
0.0 0.5 GO:0009853 photorespiration(GO:0009853)
0.0 0.1 GO:0006282 regulation of DNA repair(GO:0006282)
0.0 0.1 GO:0045740 positive regulation of DNA replication(GO:0045740)
0.0 0.8 GO:0006260 DNA replication(GO:0006260)
0.0 0.1 GO:0009410 response to xenobiotic stimulus(GO:0009410)
0.0 0.6 GO:0008213 protein methylation(GO:0006479) protein alkylation(GO:0008213)
0.0 0.1 GO:2000027 regulation of leaf morphogenesis(GO:1901371) regulation of organ morphogenesis(GO:2000027)
0.0 0.5 GO:0043067 regulation of programmed cell death(GO:0043067)
0.0 0.1 GO:0000729 meiotic DNA double-strand break processing(GO:0000706) DNA double-strand break processing(GO:0000729)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.3 4.0 GO:0034457 Mpp10 complex(GO:0034457)
1.2 5.9 GO:0072588 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
1.0 10.3 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.6 2.3 GO:0034719 SMN-Sm protein complex(GO:0034719)
0.6 1.7 GO:0034703 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
0.5 70.2 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.4 45.5 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.4 2.5 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.4 2.8 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.4 1.2 GO:0030689 Noc complex(GO:0030689)
0.4 1.5 GO:0005853 eukaryotic translation elongation factor 1 complex(GO:0005853)
0.3 1.0 GO:0005732 small nucleolar ribonucleoprotein complex(GO:0005732)
0.3 0.7 GO:0042788 polysomal ribosome(GO:0042788)
0.3 1.1 GO:0043614 multi-eIF complex(GO:0043614)
0.3 1.6 GO:0035145 exon-exon junction complex(GO:0035145)
0.3 0.8 GO:0035101 FACT complex(GO:0035101)
0.2 5.4 GO:0032040 small-subunit processome(GO:0032040)
0.2 0.7 GO:0031390 Ctf18 RFC-like complex(GO:0031390)
0.2 1.9 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.2 1.7 GO:0005844 polysome(GO:0005844)
0.2 2.4 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.2 1.8 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.2 1.0 GO:0005845 mRNA cap binding complex(GO:0005845)
0.2 3.8 GO:1990351 transporter complex(GO:1990351)
0.2 1.7 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.1 0.3 GO:0035371 microtubule plus-end(GO:0035371)
0.1 0.8 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.1 1.1 GO:0010445 nuclear dicing body(GO:0010445)
0.1 42.0 GO:0005730 nucleolus(GO:0005730)
0.1 0.6 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.1 2.1 GO:0008023 transcription elongation factor complex(GO:0008023)
0.1 1.4 GO:0005786 signal recognition particle, endoplasmic reticulum targeting(GO:0005786)
0.1 0.6 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.1 0.3 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.1 0.5 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.1 0.3 GO:0009925 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.1 0.5 GO:0030141 secretory granule(GO:0030141)
0.1 2.2 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.1 0.3 GO:0097361 CIA complex(GO:0097361)
0.1 0.4 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.1 2.1 GO:0035097 histone methyltransferase complex(GO:0035097)
0.1 3.0 GO:0005838 proteasome regulatory particle(GO:0005838) proteasome accessory complex(GO:0022624)
0.1 0.3 GO:0032301 MutSalpha complex(GO:0032301)
0.1 0.9 GO:0045298 tubulin complex(GO:0045298)
0.1 0.4 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 0.8 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.1 0.7 GO:0032153 cell division site(GO:0032153)
0.1 0.8 GO:0042555 MCM complex(GO:0042555)
0.1 0.3 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.1 2.0 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.1 0.3 GO:0034271 phosphatidylinositol 3-kinase complex(GO:0005942) phosphatidylinositol 3-kinase complex, class III, type I(GO:0034271) phosphatidylinositol 3-kinase complex, class III, type II(GO:0034272) phosphatidylinositol 3-kinase complex, class III(GO:0035032)
0.1 0.4 GO:0033597 mitotic checkpoint complex(GO:0033597)
0.1 0.5 GO:0016363 nuclear matrix(GO:0016363)
0.1 1.0 GO:0034399 nuclear periphery(GO:0034399)
0.1 6.4 GO:0005759 mitochondrial matrix(GO:0005759)
0.1 0.6 GO:0016514 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.1 0.5 GO:0005850 eukaryotic translation initiation factor 2 complex(GO:0005850)
0.1 0.7 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.1 1.1 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.1 0.8 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.1 0.7 GO:0098827 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)
0.1 0.8 GO:0031231 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.1 0.3 GO:0000408 EKC/KEOPS complex(GO:0000408)
0.1 0.5 GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)(GO:0045261)
0.1 0.3 GO:0043036 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.1 0.6 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.0 0.4 GO:0034708 methyltransferase complex(GO:0034708)
0.0 0.7 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.0 0.7 GO:0090404 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.0 0.6 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.0 0.5 GO:0071011 precatalytic spliceosome(GO:0071011)
0.0 0.4 GO:0005682 U5 snRNP(GO:0005682)
0.0 2.3 GO:0090406 pollen tube(GO:0090406)
0.0 1.6 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 0.4 GO:0005663 DNA replication factor C complex(GO:0005663)
0.0 0.7 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 0.9 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 0.5 GO:0005758 mitochondrial intermembrane space(GO:0005758)
0.0 0.7 GO:0009574 preprophase band(GO:0009574)
0.0 0.3 GO:0000439 core TFIIH complex(GO:0000439)
0.0 1.7 GO:0016607 nuclear speck(GO:0016607)
0.0 0.4 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.0 0.4 GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)(GO:0005749) succinate dehydrogenase complex (ubiquinone)(GO:0045257) fumarate reductase complex(GO:0045283)
0.0 0.2 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.0 1.3 GO:0009504 cell plate(GO:0009504)
0.0 3.5 GO:0033643 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 0.6 GO:0031307 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.2 GO:1902562 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.0 0.2 GO:0044463 cell projection part(GO:0044463)
0.0 0.3 GO:0008180 COP9 signalosome(GO:0008180)
0.0 0.1 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.0 0.5 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 0.6 GO:0005643 nuclear pore(GO:0005643)
0.0 0.7 GO:0009524 phragmoplast(GO:0009524)
0.0 0.5 GO:0071013 catalytic step 2 spliceosome(GO:0071013)
0.0 0.5 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 0.1 GO:0030127 COPII vesicle coat(GO:0030127)
0.0 0.0 GO:0030896 checkpoint clamp complex(GO:0030896)
0.0 0.5 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)
0.0 0.8 GO:0005681 spliceosomal complex(GO:0005681)
0.0 0.7 GO:0042644 chloroplast nucleoid(GO:0042644)
0.0 0.0 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.9 GO:0030964 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 0.1 GO:0030906 retromer, cargo-selective complex(GO:0030906)
0.0 0.4 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.5 GO:0016592 mediator complex(GO:0016592)
0.0 0.3 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.0 0.1 GO:0000783 telomere cap complex(GO:0000782) nuclear telomere cap complex(GO:0000783)
0.0 2.2 GO:0000785 chromatin(GO:0000785)
0.0 0.1 GO:0000796 condensin complex(GO:0000796)
0.0 0.1 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.0 0.7 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 1.0 GO:0005887 integral component of plasma membrane(GO:0005887)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.1 6.4 GO:0005080 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
1.1 5.4 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.9 3.6 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.8 2.3 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.7 2.1 GO:1990883 rRNA cytidine N-acetyltransferase activity(GO:1990883)
0.7 11.1 GO:0030515 snoRNA binding(GO:0030515)
0.6 1.7 GO:0015292 uniporter activity(GO:0015292)
0.5 2.1 GO:0097617 annealing activity(GO:0097617)
0.5 5.9 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.4 3.1 GO:0048027 mRNA 5'-UTR binding(GO:0048027)
0.4 1.2 GO:0001056 RNA polymerase I activity(GO:0001054) RNA polymerase III activity(GO:0001056)
0.4 2.9 GO:0009916 alternative oxidase activity(GO:0009916)
0.4 1.4 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.3 2.1 GO:0015189 L-glutamate transmembrane transporter activity(GO:0005313) arginine transmembrane transporter activity(GO:0015181) L-lysine transmembrane transporter activity(GO:0015189)
0.3 12.4 GO:0019843 rRNA binding(GO:0019843)
0.3 63.5 GO:0003735 structural constituent of ribosome(GO:0003735)
0.3 1.0 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.3 1.0 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.2 0.7 GO:1990518 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.2 1.7 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.2 1.0 GO:0052659 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
0.2 0.7 GO:0015146 pentose transmembrane transporter activity(GO:0015146)
0.2 0.8 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.2 0.6 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.2 3.3 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.2 0.8 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.2 0.8 GO:0000035 acyl binding(GO:0000035)
0.2 2.2 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.2 1.5 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.2 0.9 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.2 3.2 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.2 0.7 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.2 3.7 GO:0031491 nucleosome binding(GO:0031491)
0.2 0.8 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.2 1.0 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.2 1.3 GO:0032266 phosphatidylinositol-3-phosphate binding(GO:0032266)
0.2 0.5 GO:1990269 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.2 0.5 GO:0031210 phosphatidylcholine binding(GO:0031210) quaternary ammonium group binding(GO:0050997)
0.2 1.6 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.2 1.1 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.2 1.7 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.2 0.6 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
0.1 1.3 GO:0043495 protein anchor(GO:0043495)
0.1 0.4 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.1 0.4 GO:0000386 second spliceosomal transesterification activity(GO:0000386)
0.1 0.8 GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
0.1 0.4 GO:0052629 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.1 4.9 GO:0004407 histone deacetylase activity(GO:0004407) protein deacetylase activity(GO:0033558)
0.1 1.8 GO:0008327 methyl-CpG binding(GO:0008327)
0.1 9.9 GO:0042393 histone binding(GO:0042393)
0.1 0.8 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.1 1.0 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.1 2.7 GO:0031386 protein tag(GO:0031386)
0.1 11.7 GO:0051082 unfolded protein binding(GO:0051082)
0.1 1.4 GO:0008312 7S RNA binding(GO:0008312)
0.1 0.2 GO:0030619 U1 snRNA binding(GO:0030619)
0.1 1.7 GO:0008143 poly(A) binding(GO:0008143)
0.1 1.8 GO:0016018 cyclosporin A binding(GO:0016018)
0.1 0.4 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.1 0.6 GO:0070139 ubiquitin-like protein-specific endopeptidase activity(GO:0070137) SUMO-specific endopeptidase activity(GO:0070139)
0.1 0.4 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.1 0.3 GO:0036402 proteasome-activating ATPase activity(GO:0036402)
0.1 0.1 GO:0070138 ubiquitin-like protein-specific isopeptidase activity(GO:0070138) SUMO-specific isopeptidase activity(GO:0070140)
0.1 1.3 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.1 0.4 GO:0031369 translation initiation factor binding(GO:0031369)
0.1 0.4 GO:0004057 arginyltransferase activity(GO:0004057)
0.1 0.3 GO:0004528 phosphodiesterase I activity(GO:0004528) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311)
0.1 0.8 GO:0004383 guanylate cyclase activity(GO:0004383)
0.1 1.1 GO:0010997 anaphase-promoting complex binding(GO:0010997)
0.1 1.1 GO:0033170 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.1 1.8 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.1 0.4 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.1 0.3 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.1 0.4 GO:0004000 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.1 0.3 GO:0070678 preprotein binding(GO:0070678)
0.1 0.3 GO:0032143 single base insertion or deletion binding(GO:0032138) single thymine insertion binding(GO:0032143) mismatch repair complex binding(GO:0032404) MutLalpha complex binding(GO:0032405)
0.1 1.8 GO:0070122 isopeptidase activity(GO:0070122)
0.1 0.6 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.1 1.0 GO:0019209 kinase activator activity(GO:0019209) protein kinase activator activity(GO:0030295)
0.1 0.8 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.1 7.0 GO:0003724 RNA helicase activity(GO:0003724)
0.1 0.1 GO:1901474 azole transmembrane transporter activity(GO:1901474)
0.1 0.5 GO:0001653 peptide receptor activity(GO:0001653)
0.1 0.3 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.1 5.1 GO:0003743 translation initiation factor activity(GO:0003743)
0.1 0.7 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.1 0.5 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.1 0.5 GO:0048487 beta-tubulin binding(GO:0048487)
0.1 0.2 GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity(GO:0052725)
0.1 0.5 GO:0046592 polyamine oxidase activity(GO:0046592)
0.1 0.2 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.1 0.5 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.1 0.4 GO:0030544 Hsp70 protein binding(GO:0030544)
0.1 0.9 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 0.3 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.1 2.5 GO:0004707 MAP kinase activity(GO:0004707)
0.1 0.7 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.1 0.5 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.1 0.2 GO:0001016 polymerase III regulatory region sequence-specific DNA binding(GO:0000992) RNA polymerase III type 3 promoter sequence-specific DNA binding(GO:0001006) RNA polymerase III regulatory region DNA binding(GO:0001016) RNA polymerase III type 3 promoter DNA binding(GO:0001032)
0.1 40.4 GO:0044822 mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822)
0.1 0.3 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.1 0.2 GO:0000339 RNA cap binding(GO:0000339)
0.1 0.2 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.0 0.3 GO:0008022 protein C-terminus binding(GO:0008022)
0.0 0.2 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.0 0.3 GO:0030527 structural constituent of chromatin(GO:0030527)
0.0 0.3 GO:0102391 acyl-CoA ligase activity(GO:0003996) decanoate--CoA ligase activity(GO:0102391)
0.0 1.1 GO:0043021 ribonucleoprotein complex binding(GO:0043021)
0.0 0.6 GO:0008536 Ran GTPase binding(GO:0008536)
0.0 3.8 GO:0004601 peroxidase activity(GO:0004601)
0.0 0.2 GO:0008266 poly(U) RNA binding(GO:0008266)
0.0 0.4 GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.5 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 0.3 GO:0001671 ATPase activator activity(GO:0001671)
0.0 1.1 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.0 0.9 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.6 GO:0051117 ATPase binding(GO:0051117)
0.0 0.5 GO:0003725 double-stranded RNA binding(GO:0003725)
0.0 0.4 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.0 13.1 GO:0003723 RNA binding(GO:0003723)
0.0 0.5 GO:0019905 syntaxin binding(GO:0019905)
0.0 0.8 GO:0097602 cullin family protein binding(GO:0097602)
0.0 1.5 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 0.8 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 0.8 GO:0051119 sugar transmembrane transporter activity(GO:0051119)
0.0 0.2 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.0 0.6 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.0 1.1 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.5 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.0 1.5 GO:0017137 Rab GTPase binding(GO:0017137)
0.0 0.2 GO:0004526 ribonuclease P activity(GO:0004526)
0.0 1.8 GO:0036459 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459)
0.0 0.6 GO:0005048 signal sequence binding(GO:0005048)
0.0 0.1 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.1 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.0 0.3 GO:0051879 Hsp90 protein binding(GO:0051879)
0.0 0.7 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.1 GO:0004044 amidophosphoribosyltransferase activity(GO:0004044)
0.0 1.0 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 1.2 GO:0022884 protein transmembrane transporter activity(GO:0008320) macromolecule transmembrane transporter activity(GO:0022884)
0.0 2.7 GO:0032561 GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561)
0.0 0.1 GO:0005460 GDP-fucose transmembrane transporter activity(GO:0005457) UDP-glucose transmembrane transporter activity(GO:0005460)
0.0 3.0 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 0.4 GO:0003714 transcription corepressor activity(GO:0003714)
0.0 0.1 GO:0050291 sphingosine N-acyltransferase activity(GO:0050291)
0.0 0.1 GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity(GO:0008534)
0.0 0.5 GO:0031593 polyubiquitin binding(GO:0031593)
0.0 0.1 GO:0008026 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.0 0.7 GO:0050897 cobalt ion binding(GO:0050897)
0.0 0.2 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.0 1.0 GO:0016831 carboxy-lyase activity(GO:0016831)
0.0 0.1 GO:0046481 digalactosyldiacylglycerol synthase activity(GO:0046481)
0.0 0.5 GO:0043130 ubiquitin-like protein binding(GO:0032182) ubiquitin binding(GO:0043130)
0.0 1.0 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 0.2 GO:0030674 protein binding, bridging(GO:0030674)
0.0 0.1 GO:0004645 phosphorylase activity(GO:0004645)
0.0 0.1 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.0 0.6 GO:0051536 iron-sulfur cluster binding(GO:0051536) metal cluster binding(GO:0051540)
0.0 1.6 GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0016616)
0.0 1.6 GO:0005507 copper ion binding(GO:0005507)
0.0 0.5 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 3.1 PID VEGF VEGFR PATHWAY VEGF and VEGFR signaling network
0.3 2.0 PID HDAC CLASSI PATHWAY Signaling events mediated by HDAC Class I
0.2 1.1 PID IL2 PI3K PATHWAY IL2 signaling events mediated by PI3K
0.2 0.9 PID BETA CATENIN NUC PATHWAY Regulation of nuclear beta catenin signaling and target gene transcription
0.2 0.3 PID RAS PATHWAY Regulation of Ras family activation
0.1 0.4 PID AURORA A PATHWAY Aurora A signaling
0.0 0.1 PID TAP63 PATHWAY Validated transcriptional targets of TAp63 isoforms

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 3.1 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.3 2.4 REACTOME PROTEIN FOLDING Genes involved in Protein folding
0.3 0.9 REACTOME CYCLIN E ASSOCIATED EVENTS DURING G1 S TRANSITION Genes involved in Cyclin E associated events during G1/S transition
0.3 1.1 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.2 0.8 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.2 1.7 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.8 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.1 0.6 REACTOME INTERFERON SIGNALING Genes involved in Interferon Signaling
0.1 2.4 REACTOME TRANSLATION Genes involved in Translation
0.1 0.4 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.1 0.6 REACTOME RNA POL II PRE TRANSCRIPTION EVENTS Genes involved in RNA Polymerase II Pre-transcription Events
0.1 0.2 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.0 0.6 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.1 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport