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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT2G36010

Z-value: 2.37

Transcription factors associated with AT2G36010

Gene Symbol Gene ID Gene Info
AT2G36010
AT2G36010 E2F transcription factor 3

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
E2F3arTal_v1_Chr2_+_15119516_151195890.086.9e-01Click!

Activity profile of AT2G36010 motif

Sorted Z-values of AT2G36010 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr1_+_3157501_3157501 14.33 AT1G09750.1
AT1G09750
Eukaryotic aspartyl protease family protein
arTal_v1_Chr1_+_10371675_10371675 11.35 AT1G29660.1
AT1G29660
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr5_-_6222300_6222300 11.18 AT5G18660.1
PCB2
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr4_+_13391293_13391344 11.14 AT4G26530.2
AT4G26530.1
FBA5
Aldolase superfamily protein
arTal_v1_Chr4_+_2449434_2449434 10.87 AT4G04840.1
MSRB6
methionine sulfoxide reductase B6
arTal_v1_Chr4_+_13390754_13390754 10.61 AT4G26530.3
FBA5
Aldolase superfamily protein
arTal_v1_Chr5_-_14562863_14562863 9.59 AT5G36910.1
THI2.2
thionin 2.2
arTal_v1_Chr2_-_12433796_12433796 9.51 AT2G28950.1
EXPA6
expansin A6
arTal_v1_Chr2_-_15790139_15790139 8.84 AT2G37640.1
EXP3
Barwin-like endoglucanases superfamily protein
arTal_v1_Chr2_-_15789605_15789605 8.83 AT2G37640.2
EXP3
Barwin-like endoglucanases superfamily protein
arTal_v1_Chr3_+_247192_247227 8.62 AT3G01670.2
AT3G01670.1
SEOa
sieve element occlusion protein
arTal_v1_Chr3_+_6510982_6510982 8.59 AT3G18890.1
Tic62
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr2_+_15059763_15059763 8.52 AT2G35860.1
FLA16
FASCICLIN-like arabinogalactan protein 16 precursor
arTal_v1_Chr5_-_1293723_1293723 8.39 AT5G04530.1
KCS19
3-ketoacyl-CoA synthase 19
arTal_v1_Chr3_+_18262290_18262511 7.93 AT3G49260.1
AT3G49260.3
AT3G49260.2
AT3G49260.4
iqd21
IQ-domain 21
arTal_v1_Chr2_-_19563960_19563960 7.51 AT2G47750.1
GH3.9
putative indole-3-acetic acid-amido synthetase GH3.9
arTal_v1_Chr5_+_2803833_2803957 7.33 AT5G08640.1
AT5G08640.2
FLS1
flavonol synthase 1
arTal_v1_Chr3_-_1136397_1136397 7.24 AT3G04290.1
LTL1
Li-tolerant lipase 1
arTal_v1_Chr4_-_16806830_16806830 7.16 AT4G35320.1
AT4G35320
hypothetical protein
arTal_v1_Chr4_+_14017343_14017343 6.94 AT4G28310.1
AT4G28310
microtubule-associated protein
arTal_v1_Chr3_+_4389215_4389215 6.67 AT3G13470.1
Cpn60beta2
TCP-1/cpn60 chaperonin family protein
arTal_v1_Chr5_-_26501955_26501955 6.53 AT5G66330.1
AT5G66330
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr2_-_17837618_17837618 6.46 AT2G42870.1
PAR1
phy rapidly regulated 1
arTal_v1_Chr1_+_27991165_27991165 6.26 AT1G74470.1
AT1G74470
Pyridine nucleotide-disulfide oxidoreductase family protein
arTal_v1_Chr2_+_15445294_15445294 6.18 AT2G36830.1
GAMMA-TIP
gamma tonoplast intrinsic protein
arTal_v1_Chr5_-_19939797_19939797 6.15 AT5G49170.1
AT5G49170
hypothetical protein
arTal_v1_Chr3_-_17288953_17289006 6.08 AT3G46940.1
AT3G46940.2
DUT1
DUTP-PYROPHOSPHATASE-LIKE 1
arTal_v1_Chr1_+_21028137_21028179 5.85 AT1G56190.1
AT1G56190.2
AT1G56190
Phosphoglycerate kinase family protein
arTal_v1_Chr3_-_4221647_4221666 5.84 AT3G13120.1
AT3G13120.3
AT3G13120.2
AT3G13120
Ribosomal protein S10p/S20e family protein
arTal_v1_Chr3_+_21948851_21948851 5.79 AT3G59410.3
GCN2
protein kinase family protein
arTal_v1_Chr5_+_8031165_8031165 5.77 AT5G23820.1
AT5G23820
MD-2-related lipid recognition domain-containing protein
arTal_v1_Chr1_+_16970214_16970240 5.77 AT1G44900.2
AT1G44900.1
MCM2
minichromosome maintenance (MCM2/3/5) family protein
arTal_v1_Chr3_-_6855513_6855590 5.73 AT3G19720.3
AT3G19720.2
AT3G19720.1
ARC5
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr1_+_26439556_26439556 5.71 AT1G70210.1
CYCD1%3B1
CYCLIN D1;1
arTal_v1_Chr3_+_6154363_6154363 5.69 AT3G18000.1
XPL1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr2_+_11856571_11856571 5.64 AT2G27820.1
PD1
prephenate dehydratase 1
arTal_v1_Chr1_+_568558_568558 5.57 AT1G02650.2
AT1G02650.1
AT1G02650
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr1_+_12188678_12188678 5.35 AT1G33610.1
AT1G33610
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr4_+_14304921_14304921 5.28 AT4G29020.2
AT4G29020.1
AT4G29020
glycine-rich protein
arTal_v1_Chr3_-_2137012_2137085 5.28 AT3G06770.1
AT3G06770.5
AT3G06770
Pectin lyase-like superfamily protein
arTal_v1_Chr5_+_23559474_23559474 5.24 AT5G58250.1
EMB3143
YCF54
arTal_v1_Chr3_-_2137280_2137350 5.21 AT3G06770.4
AT3G06770.3
AT3G06770
Pectin lyase-like superfamily protein
arTal_v1_Chr5_+_7014662_7014669 5.19 AT5G20720.1
AT5G20720.4
AT5G20720.2
AT5G20720.3
CPN20
chaperonin 20
arTal_v1_Chr2_-_15636522_15636522 5.19 AT2G37220.1
AT2G37220
RNA-binding (RRM/RBD/RNP motifs) family protein
arTal_v1_Chr5_+_26261136_26261136 5.18 AT5G65683.1
WAVH2
Zinc finger (C3HC4-type RING finger) family protein
arTal_v1_Chr4_+_8520819_8520819 5.12 AT4G14890.1
FdC1
2Fe-2S ferredoxin-like superfamily protein
arTal_v1_Chr2_-_10063863_10063863 5.10 AT2G23670.1
YCF37
homolog of Synechocystis YCF37
arTal_v1_Chr1_-_21418115_21418115 5.08 AT1G57820.1
AT1G57820.3
VIM1
Zinc finger (C3HC4-type RING finger) family protein
arTal_v1_Chr5_-_26816761_26816761 5.07 AT5G67200.1
AT5G67200
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr3_-_9981620_9981620 5.03 AT3G27060.1
TSO2
Ferritin/ribonucleotide reductase-like family protein
arTal_v1_Chr5_-_26845294_26845294 5.03 AT5G67280.1
RLK
receptor-like kinase
arTal_v1_Chr2_+_9293261_9293261 5.01 AT2G21790.1
RNR1
ribonucleotide reductase 1
arTal_v1_Chr4_-_13752103_13752103 5.00 AT4G27520.1
ENODL2
early nodulin-like protein 2
arTal_v1_Chr4_-_16773456_16773456 4.95 AT4G35250.1
HCF244
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr1_+_26093026_26093026 4.90 AT1G69420.2
AT1G69420.1
AT1G69420
DHHC-type zinc finger family protein
arTal_v1_Chr3_+_22151164_22151221 4.75 AT3G59970.3
AT3G59970.2
AT3G59970.1
MTHFR1
methylenetetrahydrofolate reductase 1
arTal_v1_Chr2_+_16775424_16775424 4.70 AT2G40150.1
TBL28
TRICHOME BIREFRINGENCE-LIKE 28
arTal_v1_Chr3_+_168408_168408 4.70 AT3G01440.1
PnsL3
PsbQ-like 1
arTal_v1_Chr4_-_9844290_9844334 4.70 AT4G17680.3
AT4G17680.2
AT4G17680.1
AT4G17680
SBP (S-ribonuclease binding protein) family protein
arTal_v1_Chr4_+_10148951_10149031 4.68 AT4G18370.1
AT4G18370.2
AT4G18370.3
DEG5
DEGP protease 5
arTal_v1_Chr2_+_14988437_14988480 4.61 AT2G35660.1
AT2G35660.2
AT2G35660.3
CTF2A
FAD/NAD(P)-binding oxidoreductase family protein
arTal_v1_Chr5_+_1765390_1765390 4.52 AT5G05860.1
UGT76C2
UDP-glucosyl transferase 76C2
arTal_v1_Chr4_+_17254290_17254290 4.51 AT4G36570.1
RL3
RAD-like 3
arTal_v1_Chr3_+_23201032_23201033 4.46 AT3G62720.2
AT3G62720.1
XT1
xylosyltransferase 1
arTal_v1_Chr5_+_5485203_5485203 4.40 AT5G16715.1
EMB2247
protein EMBRYO DEFECTIVE 2247
arTal_v1_Chr5_+_26776953_26776971 4.38 AT5G67100.2
AT5G67100.1
ICU2
DNA-directed DNA polymerase
arTal_v1_Chr5_-_1578690_1578768 4.37 AT5G05330.2
AT5G05330.3
AT5G05330.1
AT5G05330
HMG-box (high mobility group) DNA-binding family protein
arTal_v1_Chr1_+_29871326_29871326 4.30 AT1G79420.1
AT1G79420
C-type mannose receptor (DUF620)
arTal_v1_Chr4_+_12086898_12086898 4.20 AT4G23060.1
IQD22
IQ-domain 22
arTal_v1_Chr5_-_3269594_3269594 4.19 AT5G10390.1
AT5G10390
Histone superfamily protein
arTal_v1_Chr1_-_21417937_21417937 4.17 AT1G57820.2
VIM1
Zinc finger (C3HC4-type RING finger) family protein
arTal_v1_Chr2_+_15617635_15617635 4.12 AT2G37180.1
RD28
Aquaporin-like superfamily protein
arTal_v1_Chr1_-_4882003_4882003 4.10 AT1G14290.2
SBH2
sphingoid base hydroxylase 2
arTal_v1_Chr4_+_11247991_11247991 4.10 AT4G21070.1
BRCA1
breast cancer susceptibility1
arTal_v1_Chr3_+_20246504_20246504 4.06 AT3G54690.1
SETH3
Sugar isomerase (SIS) family protein
arTal_v1_Chr5_+_5038563_5038563 4.01 AT5G15530.1
BCCP2
biotin carboxyl carrier protein 2
arTal_v1_Chr5_-_18457303_18457303 3.99 AT5G45530.1
AT5G45530
transmembrane protein, putative (DUF594)
arTal_v1_Chr4_-_16373736_16373736 3.97 AT4G34190.1
SEP1
stress enhanced protein 1
arTal_v1_Chr1_-_1437763_1437763 3.95 AT1G05020.1
AT1G05020
ENTH/ANTH/VHS superfamily protein
arTal_v1_Chr1_-_16399880_16399880 3.94 AT1G43560.1
ty2
thioredoxin Y2
arTal_v1_Chr2_-_14432482_14432482 3.94 AT2G34180.1
CIPK13
CBL-interacting protein kinase 13
arTal_v1_Chr2_-_3527460_3527500 3.93 AT2G07690.2
AT2G07690.1
MCM5
Minichromosome maintenance (MCM2/3/5) family protein
arTal_v1_Chr1_-_4882265_4882265 3.91 AT1G14290.1
SBH2
sphingoid base hydroxylase 2
arTal_v1_Chr3_+_2126312_2126312 3.87 AT3G06740.1
GATA15
GATA transcription factor 15
arTal_v1_Chr2_+_11279913_11279913 3.84 AT2G26520.1
AT2G26520
transmembrane protein
arTal_v1_Chr5_-_17624359_17624359 3.83 AT5G43830.1
AT5G43830
aluminum induced protein with YGL and LRDR motifs
arTal_v1_Chr3_+_17961266_17961266 3.82 AT3G48490.1
AT3G48490
hypothetical protein
arTal_v1_Chr2_-_16603059_16603061 3.78 AT2G39800.2
AT2G39800.4
AT2G39800.3
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
arTal_v1_Chr3_+_10838395_10838395 3.77 AT3G28840.1
AT3G28840
hypothetical protein (DUF1216)
arTal_v1_Chr2_-_16603319_16603319 3.76 AT2G39800.1
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
arTal_v1_Chr3_-_4953423_4953510 3.74 AT3G14740.2
AT3G14740.1
AT3G14740
RING/FYVE/PHD zinc finger superfamily protein
arTal_v1_Chr5_-_5741500_5741500 3.74 AT5G17420.1
IRX3
Cellulose synthase family protein
arTal_v1_Chr3_-_16662874_16662874 3.72 AT3G45430.1
AT3G45430
Concanavalin A-like lectin protein kinase family protein
arTal_v1_Chr5_+_359107_359107 3.71 AT5G01920.2
AT5G01920.1
STN8
Protein kinase superfamily protein
arTal_v1_Chr4_+_12264462_12264462 3.70 AT4G23500.1
AT4G23500
Pectin lyase-like superfamily protein
arTal_v1_Chr2_+_18537177_18537177 3.68 AT2G44940.1
AT2G44940
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr3_-_2137641_2137641 3.66 AT3G06770.2
AT3G06770
Pectin lyase-like superfamily protein
arTal_v1_Chr3_+_21671433_21671434 3.65 AT3G58610.1
AT3G58610.3
AT3G58610.2
AT3G58610
ketol-acid reductoisomerase
arTal_v1_Chr4_-_15718858_15718867 3.64 AT4G32570.2
AT4G32570.1
TIFY8
TIFY domain protein 8
arTal_v1_Chr4_+_7962428_7962430 3.63 AT4G13710.1
AT4G13710.2
AT4G13710
Pectin lyase-like superfamily protein
arTal_v1_Chr4_-_12254275_12254275 3.62 AT4G23490.1
AT4G23490
fringe-like protein (DUF604)
arTal_v1_Chr4_-_14514588_14514588 3.62 AT4G29590.1
AT4G29590
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr1_+_17300951_17300951 3.59 AT1G47210.1
CYCA3%3B2
cyclin-dependent protein kinase 3;2
arTal_v1_Chr3_-_22412663_22412663 3.59 AT3G60630.1
HAM2
GRAS family transcription factor
arTal_v1_Chr1_-_24171502_24171635 3.58 AT1G65060.2
AT1G65060.1
4CL3
4-coumarate:CoA ligase 3
arTal_v1_Chr2_-_7130729_7130729 3.56 AT2G16440.1
MCM4
Minichromosome maintenance (MCM2/3/5) family protein
arTal_v1_Chr1_-_5744636_5744636 3.54 AT1G16780.3
AT1G16780.2
VHP2%3B2
Inorganic H pyrophosphatase family protein
arTal_v1_Chr1_-_9170953_9170953 3.54 AT1G26540.1
AT1G26540
Agenet domain-containing protein
arTal_v1_Chr5_+_25833165_25833260 3.54 AT5G64630.1
AT5G64630.2
AT5G64630.3
FAS2
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr4_+_18121526_18121526 3.53 AT4G38825.1
AT4G38825
SAUR-like auxin-responsive protein family
arTal_v1_Chr3_-_16663294_16663294 3.49 AT3G45430.3
AT3G45430
Concanavalin A-like lectin protein kinase family protein
arTal_v1_Chr1_+_4095246_4095246 3.44 AT1G12100.1
AT1G12100
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr1_+_5722891_5722918 3.43 AT1G16720.2
AT1G16720.1
AT1G16720.3
HCF173
high chlorophyll fluorescence phenotype 173
arTal_v1_Chr1_+_8922416_8922416 3.43 AT1G25425.1
CLE43
CLAVATA3/ESR-RELATED 43
arTal_v1_Chr5_-_20489727_20489727 3.41 AT5G50335.1
AT5G50335
hypothetical protein
arTal_v1_Chr5_-_26120581_26120581 3.40 AT5G65360.1
AT5G65360
Histone superfamily protein
arTal_v1_Chr1_-_26253687_26253687 3.38 AT1G69770.1
CMT3
chromomethylase 3
arTal_v1_Chr1_+_29703055_29703055 3.37 AT1G78970.3
AT1G78970.1
LUP1
lupeol synthase 1
arTal_v1_Chr1_-_5744237_5744237 3.35 AT1G16780.1
VHP2%3B2
Inorganic H pyrophosphatase family protein
arTal_v1_Chr2_+_8920447_8920447 3.35 AT2G20680.1
MAN2
Glycosyl hydrolase superfamily protein
arTal_v1_Chr1_+_28668664_28668664 3.30 AT1G76410.1
ATL8
RING/U-box superfamily protein
arTal_v1_Chr1_-_24062804_24062804 3.29 AT1G64780.1
AMT1%3B2
ammonium transporter 1;2
arTal_v1_Chr1_+_17300691_17300691 3.28 AT1G47210.2
CYCA3%3B2
cyclin-dependent protein kinase 3;2
arTal_v1_Chr3_-_4620305_4620305 3.27 AT3G13980.1
AT3G13980
SKI/DACH domain protein
arTal_v1_Chr2_-_10439469_10439469 3.26 AT2G24570.1
WRKY17
WRKY DNA-binding protein 17
arTal_v1_Chr5_-_19635664_19635679 3.26 AT5G48450.1
AT5G48450.2
sks3
SKU5 similar 3
arTal_v1_Chr1_+_13026206_13026289 3.26 AT1G35420.1
AT1G35420.2
AT1G35420.3
AT1G35420
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr1_-_30335940_30335940 3.25 AT1G80710.1
DRS1
DROUGHT SENSITIVE 1
arTal_v1_Chr2_-_12415661_12415661 3.24 AT2G28900.1
OEP16-1
outer plastid envelope protein 16-1
arTal_v1_Chr3_-_8554839_8554839 3.23 AT3G23740.1
AT3G23740
hypothetical protein
arTal_v1_Chr4_-_2482447_2482447 3.21 AT4G04890.1
PDF2
protodermal factor 2
arTal_v1_Chr3_+_18155416_18155416 3.16 AT3G48980.1
AT3G48980
O-glucosyltransferase rumi-like protein (DUF821)
arTal_v1_Chr4_-_9869752_9869752 3.16 AT4G17740.2
AT4G17740.1
AT4G17740
Peptidase S41 family protein
arTal_v1_Chr3_-_16664146_16664146 3.15 AT3G45430.2
AT3G45430
Concanavalin A-like lectin protein kinase family protein
arTal_v1_Chr2_+_18851088_18851088 3.14 AT2G45770.1
CPFTSY
signal recognition particle receptor protein, chloroplast (FTSY)
arTal_v1_Chr3_+_18155087_18155087 3.12 AT3G48980.2
AT3G48980
O-glucosyltransferase rumi-like protein (DUF821)
arTal_v1_Chr3_-_5845220_5845220 3.11 AT3G17130.1
AT3G17130
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr4_-_2481590_2481590 3.09 AT4G04890.2
PDF2
protodermal factor 2
arTal_v1_Chr3_-_16415319_16415319 3.05 AT3G44940.1
AT3G44940
enabled-like protein (DUF1635)
arTal_v1_Chr1_+_27669152_27669152 3.01 AT1G73600.2
AT1G73600
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr3_+_19513937_19513996 3.01 AT3G52630.2
AT3G52630.1
AT3G52630
Nucleic acid-binding, OB-fold-like protein
arTal_v1_Chr1_-_28208577_28208590 3.00 AT1G75150.2
AT1G75150.3
AT1G75150.1
AT1G75150
DNA ligase-like protein
arTal_v1_Chr1_+_26742940_26742940 3.00 AT1G70940.1
PIN3
Auxin efflux carrier family protein
arTal_v1_Chr3_+_2620713_2620713 2.99 AT3G08630.1
AT3G08630
alphavirus core family protein (DUF3411)
arTal_v1_Chr1_+_27670626_27670626 2.98 AT1G73600.1
AT1G73600
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr1_+_27786864_27786864 2.97 AT1G73885.1
AT1G73885
AT-rich interactive domain protein
arTal_v1_Chr2_-_16963215_16963215 2.92 AT2G40640.3
AT2G40640.6
AT2G40640.7
AT2G40640.8
AT2G40640.5
AT2G40640.1
AT2G40640.4
AT2G40640.9
AT2G40640.2
AT2G40640
RING/U-box superfamily protein
arTal_v1_Chr5_+_2571957_2571957 2.92 AT5G08020.1
RPA70B
RPA70-kDa subunit B
arTal_v1_Chr1_-_30027277_30027391 2.90 AT1G79820.2
AT1G79820.1
AT1G79820.4
SGB1
Major facilitator superfamily protein
arTal_v1_Chr3_-_21783663_21783676 2.89 AT3G58940.2
AT3G58940.1
AT3G58940
F-box/RNI-like superfamily protein
arTal_v1_Chr4_-_17604944_17604944 2.88 AT4G37445.2
AT4G37445.1
AT4G37445
calcium ion-binding protein
arTal_v1_Chr5_+_24217982_24217982 2.87 AT5G60150.1
AT5G60150.2
AT5G60150
hypothetical protein
arTal_v1_Chr2_-_13081418_13081474 2.87 AT2G30695.3
AT2G30695.2
AT2G30695.4
AT2G30695.1
AT2G30695
bacterial trigger factor
arTal_v1_Chr3_-_126876_126876 2.86 AT3G01330.1
DEL3
DP-E2F-like protein 3
arTal_v1_Chr5_-_22225509_22225616 2.85 AT5G54700.1
AT5G54700.2
AT5G54700
Ankyrin repeat family protein
arTal_v1_Chr1_-_24324064_24324091 2.84 AT1G65470.2
AT1G65470.1
FAS1
chromatin assembly factor-1 (FASCIATA1) (FAS1)
arTal_v1_Chr5_-_25928879_25928879 2.83 AT5G64860.1
DPE1
disproportionating enzyme
arTal_v1_Chr2_+_18176831_18176831 2.83 AT2G43890.1
AT2G43890
Pectin lyase-like superfamily protein
arTal_v1_Chr1_-_26930347_26930347 2.82 AT1G71460.1
AT1G71460
Pentatricopeptide repeat (PPR-like) superfamily protein
arTal_v1_Chr2_+_18991171_18991171 2.81 AT2G46250.2
AT2G46250.1
AT2G46250
myosin heavy chain-like protein
arTal_v1_Chr2_+_12300203_12300203 2.76 AT2G28671.1
AT2G28671
hypothetical protein
arTal_v1_Chr1_+_29703330_29703330 2.75 AT1G78970.2
LUP1
lupeol synthase 1
arTal_v1_Chr2_-_18403483_18403483 2.72 AT2G44580.2
AT2G44580
zinc ion binding protein
arTal_v1_Chr5_+_7470328_7470443 2.71 AT5G22500.1
AT5G22500.2
FAR1
fatty acid reductase 1
arTal_v1_Chr3_+_3880908_3880935 2.71 AT3G12170.2
AT3G12170.1
AT3G12170
Chaperone DnaJ-domain superfamily protein
arTal_v1_Chr1_+_20235465_20235465 2.70 AT1G54200.1
AT1G54200
DNA mismatch repair Msh6-like protein
arTal_v1_Chr2_+_18791289_18791289 2.69 AT2G45610.1
AT2G45610
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr2_+_13328862_13328862 2.68 AT2G31270.1
CDT1A
CDT1-like protein A
arTal_v1_Chr1_+_27192740_27192902 2.68 AT1G72250.3
AT1G72250.4
AT1G72250.2
AT1G72250.1
AT1G72250
Di-glucose binding protein with Kinesin motor domain-containing protein
arTal_v1_Chr3_+_22248892_22248892 2.67 AT3G60200.1
AT3G60200
hypothetical protein
arTal_v1_Chr2_+_16152473_16152517 2.66 AT2G38620.2
AT2G38620.3
AT2G38620.1
AT2G38620.4
CDKB1%3B2
cyclin-dependent kinase B1;2
arTal_v1_Chr5_-_18773703_18773706 2.66 AT5G46280.2
AT5G46280.3
AT5G46280.1
AT5G46280.4
MCM3
Minichromosome maintenance (MCM2/3/5) family protein
arTal_v1_Chr5_-_6363413_6363413 2.63 AT5G19040.3
IPT5
isopentenyltransferase 5
arTal_v1_Chr3_-_18566834_18566834 2.63 AT3G50070.1
CYCD3%3B3
CYCLIN D3;3
arTal_v1_Chr2_-_18403654_18403654 2.62 AT2G44580.1
AT2G44580
zinc ion binding protein
arTal_v1_Chr3_+_14751280_14751280 2.60 AT3G42660.1
AT3G42660
transducin family protein / WD-40 repeat family protein
arTal_v1_Chr4_+_148958_148958 2.57 AT4G00340.2
RLK4
receptor-like protein kinase 4
arTal_v1_Chr4_+_148612_148612 2.54 AT4G00340.1
RLK4
receptor-like protein kinase 4
arTal_v1_Chr3_-_19805663_19805730 2.53 AT3G53420.2
AT3G53420.1
PIP2A
plasma membrane intrinsic protein 2A
arTal_v1_Chr1_-_23469247_23469289 2.53 AT1G63260.4
AT1G63260.1
AT1G63260.2
AT1G63260.3
AT1G63260.5
AT1G63260.6
TET10
tetraspanin10
arTal_v1_Chr2_+_19386966_19387020 2.53 AT2G47230.1
AT2G47230.2
DUF6
agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 6)
arTal_v1_Chr1_-_25622593_25622593 2.50 AT1G68360.1
AT1G68360
C2H2 and C2HC zinc fingers superfamily protein
arTal_v1_Chr3_+_4892410_4892569 2.46 AT3G14570.1
AT3G14570.3
AT3G14570.2
GSL04
glucan synthase-like 4
arTal_v1_Chr3_-_4240116_4240116 2.45 AT3G13180.1
AT3G13180
NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein
arTal_v1_Chr3_+_16968423_16968423 2.44 AT3G46200.2
AT3G46200.3
AT3G46200.1
AT3G46200.4
NUDT9
nudix hydrolase homolog 9
arTal_v1_Chr5_-_6363682_6363713 2.44 AT5G19040.2
AT5G19040.1
IPT5
isopentenyltransferase 5
arTal_v1_Chr1_-_4208951_4208999 2.44 AT1G12370.3
AT1G12370.1
AT1G12370.2
PHR1
photolyase 1
arTal_v1_Chr1_+_11212958_11212958 2.42 AT1G31320.1
LBD4
LOB domain-containing protein 4
arTal_v1_Chr1_-_30027634_30027634 2.40 AT1G79820.3
SGB1
Major facilitator superfamily protein
arTal_v1_Chr3_+_2019849_2019849 2.40 AT3G06520.1
AT3G06520
agenet domain-containing protein
arTal_v1_Chr1_-_26663337_26663337 2.39 AT1G70710.1
GH9B1
glycosyl hydrolase 9B1
arTal_v1_Chr1_+_5398926_5398990 2.39 AT1G15690.1
AT1G15690.2
AVP1
Inorganic H pyrophosphatase family protein
arTal_v1_Chr3_-_20139149_20139244 2.39 AT3G54390.1
AT3G54390.2
AT3G54390
sequence-specific DNA binding transcription factor
arTal_v1_Chr4_+_929869_929869 2.37 AT4G02100.1
AT4G02100
Heat shock protein DnaJ with tetratricopeptide repeat-containing protein
arTal_v1_Chr2_-_19303459_19303459 2.37 AT2G46980.1
ASY3
asynaptic protein
arTal_v1_Chr3_+_2020164_2020164 2.36 AT3G06520.2
AT3G06520
agenet domain-containing protein
arTal_v1_Chr5_-_7081789_7081789 2.35 AT5G20870.1
AT5G20870
O-Glycosyl hydrolases family 17 protein
arTal_v1_Chr1_-_30025658_30025658 2.33 AT1G79820.5
SGB1
Major facilitator superfamily protein
arTal_v1_Chr5_+_16202142_16202142 2.32 AT5G40460.1
AT5G40460
cyclin-dependent kinase inhibitor SMR3-like protein
arTal_v1_Chr4_-_13910995_13910995 2.32 AT4G27950.1
CRF4
cytokinin response factor 4

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G36010

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
4.1 16.4 GO:1902975 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
2.7 16.1 GO:0009263 deoxyribonucleotide biosynthetic process(GO:0009263)
2.6 15.6 GO:0031507 heterochromatin assembly(GO:0031507)
2.2 8.7 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
1.9 5.7 GO:0019695 choline metabolic process(GO:0019695)
1.7 5.2 GO:0051291 protein heterooligomerization(GO:0051291) regulation of oxidoreductase activity(GO:0051341) regulation of response to reactive oxygen species(GO:1901031)
1.6 4.8 GO:0071242 cellular response to ammonium ion(GO:0071242)
1.5 4.5 GO:0055068 nickel cation transmembrane transport(GO:0035444) cobalt ion homeostasis(GO:0055068)
1.4 7.2 GO:0010226 response to lithium ion(GO:0010226)
1.4 27.2 GO:0006949 syncytium formation(GO:0006949)
1.4 4.1 GO:0010447 response to acidic pH(GO:0010447)
1.4 4.1 GO:0071158 negative regulation of fatty acid biosynthetic process(GO:0045717) regulation of cell cycle arrest(GO:0071156) positive regulation of cell cycle arrest(GO:0071158)
1.2 6.1 GO:0019742 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
1.2 21.7 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
1.1 6.9 GO:0055129 L-proline biosynthetic process(GO:0055129)
1.1 4.5 GO:0016139 glycoside catabolic process(GO:0016139)
1.1 5.6 GO:0006571 tyrosine biosynthetic process(GO:0006571)
1.1 3.4 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
1.1 3.3 GO:2000001 regulation of DNA damage checkpoint(GO:2000001)
1.1 5.3 GO:0000085 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
1.0 5.0 GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
1.0 9.6 GO:0009405 pathogenesis(GO:0009405)
0.9 7.3 GO:0016045 detection of bacterium(GO:0016045)
0.9 2.7 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.9 8.6 GO:0010088 phloem development(GO:0010088)
0.8 5.8 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.8 3.8 GO:0060631 regulation of meiosis I(GO:0060631)
0.7 3.7 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.7 3.7 GO:0042549 photosystem II stabilization(GO:0042549)
0.7 6.4 GO:0071486 cellular response to high light intensity(GO:0071486)
0.7 2.8 GO:0000023 maltose metabolic process(GO:0000023)
0.7 2.1 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.7 8.0 GO:0046520 sphingoid biosynthetic process(GO:0046520)
0.7 4.7 GO:0071490 far-red light signaling pathway(GO:0010018) cellular response to far red light(GO:0071490)
0.7 2.0 GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) histone arginine methylation(GO:0034969) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.6 6.3 GO:0042360 vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360)
0.6 2.3 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.5 3.6 GO:0009099 valine biosynthetic process(GO:0009099)
0.5 6.8 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.5 8.5 GO:0010207 photosystem II assembly(GO:0010207)
0.5 0.5 GO:0071168 protein localization to chromatin(GO:0071168)
0.5 8.8 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.5 1.8 GO:0009270 response to humidity(GO:0009270)
0.4 2.7 GO:0007023 post-chaperonin tubulin folding pathway(GO:0007023)
0.4 3.5 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.4 4.7 GO:0010206 photosystem II repair(GO:0010206)
0.4 6.3 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.4 2.0 GO:0019419 sulfate reduction(GO:0019419)
0.4 2.4 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.4 2.4 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.4 3.9 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.4 1.9 GO:0007142 male meiosis II(GO:0007142)
0.4 2.2 GO:0051096 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.3 6.2 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.3 6.5 GO:0009641 shade avoidance(GO:0009641)
0.3 4.7 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.3 1.7 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.3 5.7 GO:0000266 mitochondrial fission(GO:0000266)
0.3 1.0 GO:0060236 regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
0.3 2.2 GO:0051955 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.3 1.2 GO:1902326 positive regulation of chlorophyll biosynthetic process(GO:1902326)
0.3 0.9 GO:0048873 tissue homeostasis(GO:0001894) homeostasis of number of meristem cells(GO:0007639) homeostasis of number of cells(GO:0048872) homeostasis of number of cells within a tissue(GO:0048873)
0.3 5.2 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.3 5.3 GO:0007064 mitotic sister chromatid cohesion(GO:0007064)
0.3 16.4 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.2 1.0 GO:0010253 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.2 3.0 GO:0010315 auxin efflux(GO:0010315)
0.2 4.7 GO:0042044 water transport(GO:0006833) fluid transport(GO:0042044)
0.2 2.2 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.2 0.7 GO:0006425 glutaminyl-tRNA aminoacylation(GO:0006425)
0.2 6.1 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.2 1.3 GO:0016120 carotene biosynthetic process(GO:0016120)
0.2 1.0 GO:0000710 meiotic mismatch repair(GO:0000710)
0.2 1.2 GO:0048445 carpel morphogenesis(GO:0048445)
0.2 1.0 GO:0034763 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.2 1.4 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.2 1.8 GO:0046471 phosphatidylglycerol biosynthetic process(GO:0006655) phosphatidylglycerol metabolic process(GO:0046471)
0.2 1.2 GO:0007188 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.2 1.5 GO:0006821 chloride transport(GO:0006821)
0.2 1.6 GO:0009942 longitudinal axis specification(GO:0009942)
0.2 1.8 GO:1901348 positive regulation of secondary cell wall biogenesis(GO:1901348)
0.2 6.0 GO:0000741 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.2 0.7 GO:0000012 single strand break repair(GO:0000012)
0.2 1.0 GO:0046087 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.2 1.1 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.2 0.8 GO:2000574 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.2 1.1 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.1 0.7 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.1 1.5 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.1 0.4 GO:0042908 xenobiotic transport(GO:0042908)
0.1 3.4 GO:0009294 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.1 0.4 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.1 3.2 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.1 1.7 GO:0042793 transcription from plastid promoter(GO:0042793)
0.1 3.6 GO:0048768 root hair cell tip growth(GO:0048768)
0.1 4.2 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.1 3.6 GO:0010584 pollen exine formation(GO:0010584)
0.1 1.6 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.1 0.4 GO:0010434 nectary development(GO:0010254) bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.1 2.1 GO:0010152 pollen maturation(GO:0010152)
0.1 1.6 GO:0048658 anther wall tapetum development(GO:0048658)
0.1 15.9 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.1 0.9 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.1 1.2 GO:0032366 intracellular sterol transport(GO:0032366)
0.1 2.1 GO:0033356 UDP-L-arabinose metabolic process(GO:0033356)
0.1 2.1 GO:0006012 galactose metabolic process(GO:0006012)
0.1 4.7 GO:0009767 photosynthetic electron transport chain(GO:0009767)
0.1 1.7 GO:0006574 valine catabolic process(GO:0006574)
0.1 0.4 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.1 1.2 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.1 2.4 GO:0052546 cell wall pectin metabolic process(GO:0052546)
0.1 1.1 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.1 0.7 GO:0070734 histone H3-K27 methylation(GO:0070734)
0.1 0.4 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 7.4 GO:0009627 systemic acquired resistance(GO:0009627)
0.1 3.7 GO:0006458 'de novo' protein folding(GO:0006458)
0.1 2.1 GO:0006817 phosphate ion transport(GO:0006817)
0.1 0.3 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.1 0.5 GO:0031929 TOR signaling(GO:0031929)
0.1 2.1 GO:0010091 trichome branching(GO:0010091)
0.1 2.9 GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436) positive regulation of proteasomal protein catabolic process(GO:1901800)
0.1 3.6 GO:0046916 cellular transition metal ion homeostasis(GO:0046916)
0.1 0.4 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.1 1.1 GO:0031425 chloroplast RNA processing(GO:0031425)
0.1 4.1 GO:0022900 electron transport chain(GO:0022900)
0.1 1.6 GO:0010025 wax biosynthetic process(GO:0010025)
0.1 0.8 GO:0006265 DNA topological change(GO:0006265)
0.1 1.7 GO:0030050 vesicle transport along actin filament(GO:0030050) vesicle cytoskeletal trafficking(GO:0099518)
0.1 0.4 GO:0042391 regulation of membrane potential(GO:0042391)
0.1 0.5 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.1 1.9 GO:0045492 xylan biosynthetic process(GO:0045492)
0.1 3.2 GO:0030244 cellulose biosynthetic process(GO:0030244)
0.1 0.2 GO:0042276 error-prone translesion synthesis(GO:0042276)
0.1 0.7 GO:0070475 rRNA base methylation(GO:0070475)
0.0 0.5 GO:0051026 chiasma assembly(GO:0051026)
0.0 0.8 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.0 1.0 GO:0006863 purine nucleobase transport(GO:0006863)
0.0 0.9 GO:0006722 triterpenoid metabolic process(GO:0006722)
0.0 0.2 GO:0048830 adventitious root development(GO:0048830)
0.0 1.2 GO:0009686 gibberellin biosynthetic process(GO:0009686)
0.0 0.2 GO:0006654 phosphatidic acid biosynthetic process(GO:0006654)
0.0 4.2 GO:0009739 response to gibberellin(GO:0009739)
0.0 0.4 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.0 2.6 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.5 GO:0010274 hydrotropism(GO:0010274)
0.0 0.2 GO:2000037 regulation of stomatal complex patterning(GO:2000037)
0.0 0.5 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.0 0.4 GO:0009690 cytokinin metabolic process(GO:0009690)
0.0 2.8 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.5 GO:0015743 malate transport(GO:0015743)
0.0 1.3 GO:0016485 protein processing(GO:0016485)
0.0 1.0 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.0 0.3 GO:0080028 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.0 0.8 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.7 GO:0006935 chemotaxis(GO:0006935) pollen tube guidance(GO:0010183) taxis(GO:0042330) positive chemotaxis(GO:0050918)
0.0 0.2 GO:0051418 interphase microtubule nucleation by interphase microtubule organizing center(GO:0051415) microtubule nucleation by microtubule organizing center(GO:0051418)
0.0 2.3 GO:0043086 negative regulation of catalytic activity(GO:0043086)
0.0 0.4 GO:0030091 protein repair(GO:0030091)
0.0 2.5 GO:0009411 response to UV(GO:0009411)
0.0 0.4 GO:0055075 potassium ion homeostasis(GO:0055075)
0.0 1.2 GO:0006885 regulation of pH(GO:0006885)
0.0 0.3 GO:0006094 gluconeogenesis(GO:0006094)
0.0 0.2 GO:0016553 base conversion or substitution editing(GO:0016553) cytidine to uridine editing(GO:0016554)
0.0 1.1 GO:0061025 membrane fusion(GO:0061025)
0.0 0.7 GO:0032880 regulation of protein localization(GO:0032880)
0.0 2.4 GO:0009451 RNA modification(GO:0009451)
0.0 0.3 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 0.8 GO:0048440 carpel development(GO:0048440)
0.0 1.7 GO:0045944 positive regulation of transcription from RNA polymerase II promoter(GO:0045944)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.8 5.3 GO:0031390 Ctf18 RFC-like complex(GO:0031390)
1.6 16.0 GO:0042555 MCM complex(GO:0042555)
1.5 4.4 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
1.0 9.2 GO:0010369 chromocenter(GO:0010369)
1.0 4.0 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
1.0 3.0 GO:0016328 lateral plasma membrane(GO:0016328)
0.9 3.7 GO:0010330 cellulose synthase complex(GO:0010330)
0.6 6.3 GO:0016272 prefoldin complex(GO:0016272)
0.6 6.2 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.5 4.1 GO:0070531 BRCA1-A complex(GO:0070531)
0.5 1.5 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.5 8.8 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.4 2.2 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.4 8.6 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.3 1.0 GO:0036387 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.3 2.9 GO:0005662 DNA replication factor A complex(GO:0005662)
0.3 1.3 GO:0009509 chromoplast(GO:0009509)
0.3 12.6 GO:0031978 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.3 1.1 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.3 2.4 GO:0005677 chromatin silencing complex(GO:0005677)
0.3 0.8 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.3 1.3 GO:0031907 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.2 1.0 GO:0005828 kinetochore microtubule(GO:0005828)
0.2 2.3 GO:0044450 microtubule organizing center part(GO:0044450)
0.2 1.1 GO:0043073 germ cell nucleus(GO:0043073)
0.2 0.8 GO:0030286 dynein complex(GO:0030286)
0.1 40.4 GO:0048046 apoplast(GO:0048046)
0.1 7.5 GO:0009707 chloroplast outer membrane(GO:0009707)
0.1 1.7 GO:0009508 plastid chromosome(GO:0009508)
0.1 51.6 GO:0009579 thylakoid(GO:0009579)
0.1 2.2 GO:0016459 myosin complex(GO:0016459)
0.1 0.3 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.1 5.0 GO:0005811 lipid particle(GO:0005811)
0.1 0.8 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.1 0.5 GO:0038201 TORC1 complex(GO:0031931) TOR complex(GO:0038201)
0.1 4.5 GO:0005797 Golgi medial cisterna(GO:0005797)
0.1 1.1 GO:0005682 U5 snRNP(GO:0005682)
0.1 1.2 GO:0000418 DNA-directed RNA polymerase IV complex(GO:0000418)
0.1 1.0 GO:0009986 cell surface(GO:0009986)
0.0 7.8 GO:0009505 plant-type cell wall(GO:0009505)
0.0 2.1 GO:0005875 microtubule associated complex(GO:0005875)
0.0 16.9 GO:0009570 chloroplast stroma(GO:0009570)
0.0 2.8 GO:1990204 oxidoreductase complex(GO:1990204)
0.0 58.9 GO:0005576 extracellular region(GO:0005576)
0.0 1.4 GO:0015629 actin cytoskeleton(GO:0015629)
0.0 0.1 GO:0005801 cis-Golgi network(GO:0005801)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
3.3 10.0 GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
2.7 8.0 GO:0000170 sphingosine hydroxylase activity(GO:0000170)
2.1 6.2 GO:0015204 urea transmembrane transporter activity(GO:0015204)
1.9 5.7 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
1.7 6.9 GO:0004349 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
1.6 21.7 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
1.5 4.5 GO:0015099 cobalt ion transmembrane transporter activity(GO:0015087) nickel cation transmembrane transporter activity(GO:0015099)
1.3 4.0 GO:0009374 biotin binding(GO:0009374)
1.2 6.2 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
1.2 9.7 GO:0070035 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
1.2 7.1 GO:0045431 flavonol synthase activity(GO:0045431)
1.0 9.2 GO:0010429 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.9 2.8 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.9 5.6 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.8 4.7 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.8 11.7 GO:0003688 DNA replication origin binding(GO:0003688)
0.8 6.1 GO:0042299 lupeol synthase activity(GO:0042299)
0.8 6.1 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.7 3.0 GO:0070182 DNA polymerase binding(GO:0070182)
0.7 2.0 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.6 1.8 GO:0034596 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.6 1.8 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.6 6.1 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.5 7.4 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.5 4.7 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.5 2.4 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.5 5.1 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.5 8.8 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.5 2.7 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.4 3.1 GO:0005047 signal recognition particle binding(GO:0005047)
0.4 2.4 GO:0003913 DNA photolyase activity(GO:0003913)
0.4 1.2 GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.4 3.9 GO:0009378 four-way junction helicase activity(GO:0009378)
0.4 8.9 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.4 2.7 GO:0048487 beta-tubulin binding(GO:0048487)
0.4 7.2 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.4 2.6 GO:0032977 membrane insertase activity(GO:0032977)
0.4 3.9 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.4 2.1 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.3 4.4 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.3 3.4 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.3 4.4 GO:0033170 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.3 21.2 GO:0004650 polygalacturonase activity(GO:0004650)
0.3 0.9 GO:0015026 coreceptor activity(GO:0015026)
0.3 1.5 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.3 1.5 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.3 2.9 GO:0098847 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.3 1.1 GO:0030742 GTP-dependent protein binding(GO:0030742)
0.3 1.1 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.3 1.1 GO:0097157 U2 snRNA binding(GO:0030620) pre-mRNA intronic binding(GO:0097157)
0.3 2.1 GO:0010011 auxin binding(GO:0010011)
0.3 1.0 GO:0047158 sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity(GO:0047158)
0.3 3.8 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.3 1.8 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.2 0.7 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.2 2.1 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.2 0.7 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.2 3.0 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.2 0.6 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.2 1.8 GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen(GO:0016713)
0.2 2.0 GO:0004312 fatty acid synthase activity(GO:0004312)
0.2 3.5 GO:0003725 double-stranded RNA binding(GO:0003725)
0.2 7.2 GO:0016881 acid-amino acid ligase activity(GO:0016881)
0.2 4.1 GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses(GO:0016861)
0.2 0.9 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.2 7.5 GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor(GO:0016628)
0.2 1.0 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.2 1.6 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.2 2.1 GO:0000822 inositol hexakisphosphate binding(GO:0000822)
0.2 5.1 GO:0008266 poly(U) RNA binding(GO:0008266)
0.2 1.0 GO:0004126 cytidine deaminase activity(GO:0004126)
0.2 4.0 GO:0016168 chlorophyll binding(GO:0016168)
0.2 0.8 GO:0045505 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.2 7.5 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.1 4.7 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.1 3.6 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.1 1.4 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.1 0.7 GO:0016436 rRNA (uridine) methyltransferase activity(GO:0016436) rRNA (uridine-N3-)-methyltransferase activity(GO:0070042)
0.1 4.7 GO:0051087 chaperone binding(GO:0051087)
0.1 4.1 GO:0000049 tRNA binding(GO:0000049)
0.1 0.7 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.1 1.2 GO:0015198 peptide transporter activity(GO:0015197) oligopeptide transporter activity(GO:0015198)
0.1 1.9 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.1 3.9 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.1 1.6 GO:0008409 5'-3' exonuclease activity(GO:0008409)
0.1 0.8 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.1 3.6 GO:0061733 histone acetyltransferase activity(GO:0004402) peptide-lysine-N-acetyltransferase activity(GO:0061733)
0.1 0.8 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.1 0.6 GO:0003910 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.1 1.2 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.1 2.6 GO:0008810 cellulase activity(GO:0008810)
0.1 4.2 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.1 4.2 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.1 1.7 GO:0016844 strictosidine synthase activity(GO:0016844)
0.1 7.8 GO:0015144 carbohydrate transmembrane transporter activity(GO:0015144)
0.1 1.6 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.1 0.2 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
0.1 1.0 GO:0102391 long-chain fatty acid-CoA ligase activity(GO:0004467) decanoate--CoA ligase activity(GO:0102391)
0.1 1.5 GO:0008308 voltage-gated anion channel activity(GO:0008308)
0.1 0.7 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.1 0.7 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.1 7.1 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.1 0.8 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.1 4.1 GO:0043621 protein self-association(GO:0043621)
0.1 3.8 GO:0003743 translation initiation factor activity(GO:0003743)
0.1 1.7 GO:0000146 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.1 8.6 GO:0008017 microtubule binding(GO:0008017)
0.0 2.7 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 1.2 GO:0032934 sterol binding(GO:0032934)
0.0 0.7 GO:0030983 mismatched DNA binding(GO:0030983)
0.0 0.3 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.0 1.0 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 6.2 GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709)
0.0 1.3 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 2.1 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.9 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 0.5 GO:0030674 protein binding, bridging(GO:0030674)
0.0 0.7 GO:0004022 alcohol dehydrogenase (NAD) activity(GO:0004022)
0.0 0.5 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.0 0.4 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.0 1.3 GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors(GO:0016627)
0.0 1.3 GO:0003714 transcription corepressor activity(GO:0003714)
0.0 1.2 GO:0003727 single-stranded RNA binding(GO:0003727)
0.0 1.9 GO:0051015 actin filament binding(GO:0051015)
0.0 1.3 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.0 1.0 GO:0003678 DNA helicase activity(GO:0003678)
0.0 0.2 GO:0004623 phospholipase A2 activity(GO:0004623)
0.0 1.8 GO:0042393 histone binding(GO:0042393)
0.0 5.1 GO:0005516 calmodulin binding(GO:0005516)
0.0 4.3 GO:0042803 protein homodimerization activity(GO:0042803)
0.0 3.1 GO:0004857 enzyme inhibitor activity(GO:0004857)
0.0 1.1 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 2.8 GO:0008134 transcription factor binding(GO:0008134)
0.0 0.7 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.2 GO:0005504 fatty acid binding(GO:0005504)
0.0 1.2 GO:0016298 lipase activity(GO:0016298)
0.0 0.2 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.4 4.1 PID AURORA A PATHWAY Aurora A signaling
0.5 4.8 PID ATR PATHWAY ATR signaling pathway
0.4 3.6 PID CMYB PATHWAY C-MYB transcription factor network
0.2 1.2 PID FANCONI PATHWAY Fanconi anemia pathway
0.2 2.7 PID E2F PATHWAY E2F transcription factor network
0.1 0.3 PID REG GR PATHWAY Glucocorticoid receptor regulatory network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
2.3 16.0 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
1.0 4.1 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.5 2.7 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.2 1.0 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.2 1.0 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.1 0.7 REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS Genes involved in Homologous recombination repair of replication-independent double-strand breaks
0.1 0.3 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis