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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT3G10480

Z-value: 3.31

Transcription factors associated with AT3G10480

Gene Symbol Gene ID Gene Info
AT3G10480
AT3G10480 NAC domain containing protein 50

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
NAC050arTal_v1_Chr3_+_3264348_3264348-0.937.8e-13Click!

Activity profile of AT3G10480 motif

Sorted Z-values of AT3G10480 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr3_+_10255906_10255941 18.92 AT3G27690.2
AT3G27690.1
LHCB2.3
photosystem II light harvesting complex protein 2.3
arTal_v1_Chr2_+_14524607_14524607 18.11 AT2G34430.1
LHB1B1
light-harvesting chlorophyll-protein complex II subunit B1
arTal_v1_Chr3_+_5505360_5505360 18.05 AT3G16240.1
DELTA-TIP
delta tonoplast integral protein
arTal_v1_Chr1_-_29635931_29635931 16.34 AT1G78820.1
AT1G78820
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
arTal_v1_Chr1_-_4090857_4090857 14.92 AT1G12090.1
ELP
extensin-like protein
arTal_v1_Chr3_+_5556710_5556710 14.73 AT3G16370.1
AT3G16370
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr5_-_15382071_15382071 14.52 AT5G38420.1
RBCS2B
Ribulose bisphosphate carboxylase (small chain) family protein
arTal_v1_Chr5_+_4757856_4757972 13.51 AT5G14740.3
AT5G14740.6
AT5G14740.1
AT5G14740.7
AT5G14740.8
AT5G14740.2
AT5G14740.4
AT5G14740.5
CA2
carbonic anhydrase 2
arTal_v1_Chr4_+_18291218_18291218 13.36 AT4G39330.1
AT4G39330.2
CAD9
cinnamyl alcohol dehydrogenase 9
arTal_v1_Chr4_-_7493080_7493080 12.86 AT4G12730.1
FLA2
FASCICLIN-like arabinogalactan 2
arTal_v1_Chr5_-_15385247_15385320 12.55 AT5G38430.2
AT5G38430.1
RBCS1B
Ribulose bisphosphate carboxylase (small chain) family protein
arTal_v1_Chr1_+_10371675_10371675 12.46 AT1G29660.1
AT1G29660
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr4_+_2449434_2449434 12.33 AT4G04840.1
MSRB6
methionine sulfoxide reductase B6
arTal_v1_Chr1_-_10475969_10475969 12.26 AT1G29920.1
CAB2
chlorophyll A/B-binding protein 2
arTal_v1_Chr5_+_4758921_4758921 12.21 AT5G14740.9
CA2
carbonic anhydrase 2
arTal_v1_Chr3_+_17228642_17228642 12.18 AT3G46780.1
PTAC16
plastid transcriptionally active 16
arTal_v1_Chr3_-_16448844_16448844 11.92 AT3G44990.1
XTH31
xyloglucan endo-transglycosylase-related 8
arTal_v1_Chr4_-_176870_176870 11.78 AT4G00400.1
GPAT8
glycerol-3-phosphate acyltransferase 8
arTal_v1_Chr1_-_59215_59215 11.74 AT1G01120.1
KCS1
3-ketoacyl-CoA synthase 1
arTal_v1_Chr3_+_18046144_18046144 11.43 AT3G48720.1
DCF
HXXXD-type acyl-transferase family protein
arTal_v1_Chr1_+_6409655_6409655 11.30 AT1G18620.3
AT1G18620.1
AT1G18620.4
TRM3
LONGIFOLIA protein
arTal_v1_Chr1_-_25049424_25049424 11.17 AT1G67090.2
RBCS1A
ribulose bisphosphate carboxylase small chain 1A
arTal_v1_Chr1_-_25049667_25049667 11.17 AT1G67090.1
RBCS1A
ribulose bisphosphate carboxylase small chain 1A
arTal_v1_Chr1_-_6999839_6999839 10.93 AT1G20190.1
EXPA11
expansin 11
arTal_v1_Chr1_+_4001113_4001295 10.65 AT1G11860.3
AT1G11860.1
AT1G11860.2
AT1G11860
Glycine cleavage T-protein family
arTal_v1_Chr1_+_26141726_26141836 10.57 AT1G69530.2
AT1G69530.1
AT1G69530.3
AT1G69530.5
AT1G69530.4
EXPA1
expansin A1
arTal_v1_Chr1_-_26711462_26711587 10.55 AT1G70830.4
AT1G70830.2
AT1G70830.1
AT1G70830.5
AT1G70830.3
MLP28
MLP-like protein 28
arTal_v1_Chr5_-_18026077_18026077 10.48 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
arTal_v1_Chr1_-_27340044_27340044 10.44 AT1G72610.1
GER1
germin-like protein 1
arTal_v1_Chr3_-_977474_977474 10.40 AT3G03820.1
SAUR29
SAUR-like auxin-responsive protein family
arTal_v1_Chr5_+_5983683_5983683 10.34 AT5G18080.1
SAUR24
SAUR-like auxin-responsive protein family
arTal_v1_Chr1_-_6999523_6999523 10.19 AT1G20190.2
EXPA11
expansin 11
arTal_v1_Chr3_+_251868_251868 10.11 AT3G01680.1
SEOR1
sieve element occlusion amino-terminus protein
arTal_v1_Chr5_-_4171954_4171954 10.00 AT5G13140.1
AT5G13140
Pollen Ole e 1 allergen and extensin family protein
arTal_v1_Chr1_-_28423520_28423520 9.97 AT1G75690.1
LQY1
DnaJ/Hsp40 cysteine-rich domain superfamily protein
arTal_v1_Chr5_-_8707885_8707885 9.84 AT5G25190.1
ESE3
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr1_+_6410947_6410947 9.84 AT1G18620.5
TRM3
LONGIFOLIA protein
arTal_v1_Chr5_-_5966785_5966785 9.68 AT5G18020.1
SAUR20
SAUR-like auxin-responsive protein family
arTal_v1_Chr1_-_11740399_11740399 9.66 AT1G32470.1
AT1G32470
Single hybrid motif superfamily protein
arTal_v1_Chr4_+_16397995_16397995 9.61 AT4G34260.1
FUC95A
1,2-alpha-L-fucosidase
arTal_v1_Chr1_+_6410033_6410033 9.61 AT1G18620.2
TRM3
LONGIFOLIA protein
arTal_v1_Chr2_+_19243348_19243427 9.52 AT2G46820.1
AT2G46820.2
PSI-P
photosystem I P subunit
arTal_v1_Chr1_+_17918207_17918207 9.45 AT1G48480.1
RKL1
receptor-like kinase 1
arTal_v1_Chr4_-_17606924_17607050 9.44 AT4G37450.1
AT4G37450.2
AGP18
arabinogalactan protein 18
arTal_v1_Chr3_+_247192_247227 9.43 AT3G01670.2
AT3G01670.1
SEOa
sieve element occlusion protein
arTal_v1_Chr4_+_17243583_17243583 9.43 AT4G36540.2
AT4G36540.1
BEE2
BR enhanced expression 2
arTal_v1_Chr1_+_19454798_19454798 9.42 AT1G52230.1
PSAH2
photosystem I subunit H2
arTal_v1_Chr4_-_12772438_12772479 9.40 AT4G24780.1
AT4G24780.2
AT4G24780
Pectin lyase-like superfamily protein
arTal_v1_Chr5_-_6976036_6976036 9.25 AT5G20630.1
GER3
germin 3
arTal_v1_Chr4_+_14517393_14517393 9.25 AT4G29610.1
AT4G29610
Cytidine/deoxycytidylate deaminase family protein
arTal_v1_Chr4_+_14215473_14215473 9.14 AT4G28780.1
AT4G28780
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr2_-_7954680_7954785 9.12 AT2G18300.1
AT2G18300.3
AT2G18300.2
HBI1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr1_+_7252111_7252111 9.11 AT1G20850.1
XCP2
xylem cysteine peptidase 2
arTal_v1_Chr3_-_19595834_19595834 9.02 AT3G52870.1
AT3G52870
IQ calmodulin-binding motif family protein
arTal_v1_Chr5_-_17581275_17581275 8.90 AT5G43750.1
PnsB5
NAD(P)H dehydrogenase 18
arTal_v1_Chr3_+_8586359_8586359 8.89 AT3G23805.1
RALFL24
ralf-like 24
arTal_v1_Chr4_+_493546_493548 8.84 AT4G01150.1
AT4G01150.2
AT4G01150
CURVATURE THYLAKOID 1A-like protein
arTal_v1_Chr3_+_6180621_6180621 8.82 AT3G18050.1
AT3G18050
GPI-anchored protein
arTal_v1_Chr1_+_10477885_10477885 8.72 AT1G29930.1
CAB1
chlorophyll A/B binding protein 1
arTal_v1_Chr4_+_13725546_13725546 8.70 AT4G27440.2
AT4G27440.1
PORB
protochlorophyllide oxidoreductase B
arTal_v1_Chr1_+_5489145_5489145 8.69 AT1G15980.1
PnsB1
NDH-dependent cyclic electron flow 1
arTal_v1_Chr1_+_12267808_12267808 8.60 AT1G33811.1
AT1G33811
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr5_+_19825078_19825078 8.59 AT5G48900.1
AT5G48900
Pectin lyase-like superfamily protein
arTal_v1_Chr4_-_8307934_8307934 8.51 AT4G14440.1
HCD1
3-hydroxyacyl-CoA dehydratase 1
arTal_v1_Chr1_+_3664187_3664187 8.51 AT1G10960.1
FD1
ferredoxin 1
arTal_v1_Chr4_-_13398307_13398307 8.49 AT4G26540.1
AT4G26540
Leucine-rich repeat receptor-like protein kinase family protein
arTal_v1_Chr2_+_19191247_19191247 8.48 AT2G46710.1
ROPGAP3
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
arTal_v1_Chr5_+_5968352_5968352 8.42 AT5G18030.1
AT5G18030
SAUR-like auxin-responsive protein family
arTal_v1_Chr1_-_21614169_21614169 8.37 AT1G58270.1
ZW9
TRAF-like family protein
arTal_v1_Chr5_-_6842946_6842946 8.35 AT5G20270.1
HHP1
heptahelical transmembrane protein1
arTal_v1_Chr4_+_12870006_12870008 8.32 AT4G25050.2
AT4G25050.1
ACP4
acyl carrier protein 4
arTal_v1_Chr1_-_464981_464981 8.29 AT1G02335.1
GL22
germin-like protein subfamily 2 member 2 precursor
arTal_v1_Chr5_-_990630_990630 8.29 AT5G03760.1
ATCSLA09
Nucleotide-diphospho-sugar transferases superfamily protein
arTal_v1_Chr1_+_16871696_16871696 8.28 AT1G44575.2
NPQ4
Chlorophyll A-B binding family protein
arTal_v1_Chr1_+_16871511_16871511 8.26 AT1G44575.3
NPQ4
Chlorophyll A-B binding family protein
arTal_v1_Chr1_-_15607966_15607966 8.24 AT1G41830.1
SKS6
SKU5-similar 6
arTal_v1_Chr1_-_20803449_20803449 8.23 AT1G55670.1
PSAG
photosystem I subunit G
arTal_v1_Chr3_-_5469594_5469594 8.23 AT3G16140.1
PSAH-1
photosystem I subunit H-1
arTal_v1_Chr3_+_21076505_21076505 8.21 AT3G56940.1
AT3G56940.2
CRD1
dicarboxylate diiron protein, putative (Crd1)
arTal_v1_Chr2_+_18286321_18286321 8.21 AT2G44230.1
AT2G44230
hypothetical protein (DUF946)
arTal_v1_Chr1_+_16870221_16870221 8.20 AT1G44575.1
NPQ4
Chlorophyll A-B binding family protein
arTal_v1_Chr1_+_4868346_4868346 8.17 AT1G14250.1
AT1G14250
GDA1/CD39 nucleoside phosphatase family protein
arTal_v1_Chr3_-_8623214_8623214 8.17 AT3G23880.1
AT3G23880
F-box and associated interaction domains-containing protein
arTal_v1_Chr3_-_19467455_19467455 8.16 AT3G52500.1
AT3G52500
Eukaryotic aspartyl protease family protein
arTal_v1_Chr5_+_6457026_6457026 8.04 AT5G19190.1
AT5G19190
hypothetical protein
arTal_v1_Chr3_+_188321_188384 8.01 AT3G01480.1
AT3G01480.2
CYP38
cyclophilin 38
arTal_v1_Chr1_-_29485389_29485389 7.98 AT1G78370.1
GSTU20
glutathione S-transferase TAU 20
arTal_v1_Chr4_-_18165740_18165740 7.95 AT4G38970.2
FBA2
fructose-bisphosphate aldolase 2
arTal_v1_Chr4_-_18166008_18166008 7.95 AT4G38970.1
FBA2
fructose-bisphosphate aldolase 2
arTal_v1_Chr4_+_12876822_12876948 7.88 AT4G25080.6
AT4G25080.5
AT4G25080.2
AT4G25080.1
AT4G25080.3
AT4G25080.4
CHLM
magnesium-protoporphyrin IX methyltransferase
arTal_v1_Chr3_-_17495033_17495033 7.82 AT3G47470.1
LHCA4
light-harvesting chlorophyll-protein complex I subunit A4
arTal_v1_Chr3_+_4956349_4956349 7.82 AT3G14760.1
AT3G14760
transmembrane protein
arTal_v1_Chr1_+_23911024_23911024 7.81 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
arTal_v1_Chr1_-_18405493_18405681 7.76 AT1G49730.3
AT1G49730.4
AT1G49730.2
AT1G49730.5
AT1G49730.1
AT1G49730
Protein kinase superfamily protein
arTal_v1_Chr5_+_18530834_18530834 7.72 AT5G45680.1
FKBP13
FK506-binding protein 13
arTal_v1_Chr3_-_6436046_6436046 7.72 AT3G18710.1
PUB29
plant U-box 29
arTal_v1_Chr1_+_2047886_2047886 7.72 AT1G06680.2
PSBP-1
photosystem II subunit P-1
arTal_v1_Chr3_-_7187521_7187521 7.72 AT3G20570.1
ENODL9
early nodulin-like protein 9
arTal_v1_Chr1_+_2047634_2047634 7.71 AT1G06680.1
PSBP-1
photosystem II subunit P-1
arTal_v1_Chr4_+_160643_160643 7.70 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
arTal_v1_Chr5_-_1293723_1293723 7.70 AT5G04530.1
KCS19
3-ketoacyl-CoA synthase 19
arTal_v1_Chr1_-_26538437_26538437 7.69 AT1G70410.2
BCA4
beta carbonic anhydrase 4
arTal_v1_Chr5_+_18945543_18945543 7.67 AT5G46690.2
AT5G46690.1
bHLH071
beta HLH protein 71
arTal_v1_Chr5_-_18371021_18371021 7.66 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
arTal_v1_Chr3_-_23165387_23165387 7.66 AT3G62630.1
AT3G62630
stress response NST1-like protein (DUF1645)
arTal_v1_Chr5_+_5975780_5975780 7.65 AT5G18060.1
SAUR23
SAUR-like auxin-responsive protein family
arTal_v1_Chr1_-_23487091_23487091 7.65 AT1G63310.1
AT1G63310
hypothetical protein
arTal_v1_Chr1_+_310169_310169 7.64 AT1G01900.1
SBTI1.1
subtilase family protein
arTal_v1_Chr4_-_15429113_15429225 7.55 AT4G31890.2
AT4G31890.1
AT4G31890.3
AT4G31890
ARM repeat superfamily protein
arTal_v1_Chr1_-_25833966_25833966 7.54 AT1G68780.1
AT1G68780
RNI-like superfamily protein
arTal_v1_Chr3_-_3277930_3277930 7.54 AT3G10520.1
HB2
hemoglobin 2
arTal_v1_Chr2_+_13940187_13940187 7.49 AT2G32860.2
AT2G32860.1
BGLU33
beta glucosidase 33
arTal_v1_Chr5_-_753657_753657 7.46 AT5G03170.1
FLA11
FASCICLIN-like arabinogalactan-protein 11
arTal_v1_Chr4_-_9157133_9157133 7.44 AT4G16155.1
AT4G16155
dihydrolipoamide dehydrogenase
arTal_v1_Chr3_-_4042075_4042075 7.43 AT3G12710.1
AT3G12710
DNA glycosylase superfamily protein
arTal_v1_Chr5_-_7738535_7738535 7.42 AT5G23060.2
AT5G23060.1
CaS
calcium sensing receptor
arTal_v1_Chr4_-_16384468_16384468 7.42 AT4G34220.1
AT4G34220
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr1_-_30041952_30041952 7.41 AT1G79850.1
RPS17
ribosomal protein S17
arTal_v1_Chr3_-_18628888_18628914 7.41 AT3G50240.3
AT3G50240.2
AT3G50240.4
AT3G50240.1
KICP-02
ATP binding microtubule motor family protein
arTal_v1_Chr1_+_9534488_9534510 7.40 AT1G27460.2
AT1G27460.1
AT1G27460.3
NPGR1
no pollen germination related 1
arTal_v1_Chr5_-_671687_671687 7.40 AT5G02890.1
AT5G02890
HXXXD-type acyl-transferase family protein
arTal_v1_Chr1_-_10306587_10306595 7.36 AT1G29450.2
AT1G29450.1
AT1G29450
SAUR-like auxin-responsive protein family
arTal_v1_Chr5_-_7419335_7419335 7.35 AT5G22390.1
AT5G22390
FANTASTIC four-like protein (DUF3049)
arTal_v1_Chr2_+_11550705_11550841 7.33 AT2G27060.1
AT2G27060.2
AT2G27060.3
AT2G27060
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr4_+_13177356_13177356 7.32 AT4G25960.1
ABCB2
P-glycoprotein 2
arTal_v1_Chr1_-_26537422_26537426 7.29 AT1G70410.3
AT1G70410.1
BCA4
beta carbonic anhydrase 4
arTal_v1_Chr2_-_12277417_12277417 7.28 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
arTal_v1_Chr1_-_6283348_6283348 7.26 AT1G18265.1
AT1G18265
zein-binding protein (Protein of unknown function, DUF593)
arTal_v1_Chr1_-_23137254_23137254 7.25 AT1G62510.1
AT1G62510
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr5_-_5963405_5963405 7.24 AT5G18010.1
SAUR19
SAUR-like auxin-responsive protein family
arTal_v1_Chr3_+_20016837_20016892 7.21 AT3G54050.1
AT3G54050.2
HCEF1
high cyclic electron flow 1
arTal_v1_Chr2_+_19521774_19521774 7.17 AT2G47590.1
PHR2
photolyase/blue-light receptor 2
arTal_v1_Chr4_-_14872267_14872267 7.15 AT4G30410.1
AT4G30410.2
AT4G30410
sequence-specific DNA binding transcription factor
arTal_v1_Chr5_+_21170048_21170048 7.15 AT5G52100.1
CRR1
Dihydrodipicolinate reductase, bacterial/plant
arTal_v1_Chr1_-_11872926_11872926 7.14 AT1G32780.1
AT1G32780
GroES-like zinc-binding dehydrogenase family protein
arTal_v1_Chr2_-_7727404_7727503 7.14 AT2G17780.2
AT2G17780.4
AT2G17780.5
AT2G17780.8
AT2G17780.10
AT2G17780.9
AT2G17780.1
AT2G17780.6
AT2G17780.3
AT2G17780.7
MCA2
PLAC8 family protein
arTal_v1_Chr1_+_27452748_27452766 7.12 AT1G72970.1
AT1G72970.2
HTH
Glucose-methanol-choline (GMC) oxidoreductase family protein
arTal_v1_Chr2_-_12277245_12277245 7.07 AT2G28630.1
KCS12
3-ketoacyl-CoA synthase 12
arTal_v1_Chr5_+_4974671_4974671 7.07 AT5G15310.2
AT5G15310.4
AT5G15310.3
AT5G15310.1
MYB16
myb domain protein 16
arTal_v1_Chr2_-_13797237_13797237 7.06 AT2G32500.2
AT2G32500.1
AT2G32500
Stress responsive alpha-beta barrel domain protein
arTal_v1_Chr3_+_20709294_20709294 6.98 AT3G55800.1
SBPASE
sedoheptulose-bisphosphatase
arTal_v1_Chr2_-_15797059_15797059 6.97 AT2G37660.1
AT2G37660
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr1_+_3031046_3031046 6.96 AT1G09390.1
AT1G09390
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr1_-_18690503_18690503 6.91 AT1G50450.1
AT1G50450
Saccharopine dehydrogenase
arTal_v1_Chr2_-_1149261_1149261 6.91 AT2G03750.1
AT2G03750
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr5_+_7778017_7778095 6.91 AT5G23120.2
AT5G23120.1
HCF136
photosystem II stability/assembly factor, chloroplast (HCF136)
arTal_v1_Chr2_-_17837618_17837618 6.90 AT2G42870.1
PAR1
phy rapidly regulated 1
arTal_v1_Chr3_-_20806333_20806333 6.89 AT3G56060.1
AT3G56060
Glucose-methanol-choline (GMC) oxidoreductase family protein
arTal_v1_Chr1_+_24149208_24149208 6.88 AT1G65010.1
AT1G65010
WEB family protein (DUF827)
arTal_v1_Chr1_-_21266368_21266469 6.86 AT1G56720.2
AT1G56720.4
AT1G56720
Protein kinase superfamily protein
arTal_v1_Chr4_+_14192569_14192569 6.85 AT4G28720.1
YUC8
Flavin-binding monooxygenase family protein
arTal_v1_Chr3_+_20780175_20780175 6.85 AT3G55990.1
ESK1
trichome birefringence-like protein (DUF828)
arTal_v1_Chr5_-_18588792_18588792 6.82 AT5G45820.1
CIPK20
CBL-interacting protein kinase 20
arTal_v1_Chr4_-_2352025_2352025 6.81 AT4G04640.1
ATPC1
ATPase, F1 complex, gamma subunit protein
arTal_v1_Chr5_+_23077120_23077120 6.81 AT5G57030.1
LUT2
Lycopene beta/epsilon cyclase protein
arTal_v1_Chr1_+_9259750_9259750 6.80 AT1G26770.2
EXPA10
expansin A10
arTal_v1_Chr1_-_19101265_19101265 6.80 AT1G51500.1
ABCG12
ABC-2 type transporter family protein
arTal_v1_Chr5_-_19166135_19166135 6.78 AT5G47190.1
AT5G47190
Ribosomal protein L19 family protein
arTal_v1_Chr1_+_18802552_18802552 6.77 AT1G50732.1
AT1G50732
transmembrane protein
arTal_v1_Chr1_-_1169034_1169034 6.75 AT1G04360.1
AT1G04360
RING/U-box superfamily protein
arTal_v1_Chr5_+_15742543_15742543 6.74 AT5G39320.1
UDG4
UDP-glucose 6-dehydrogenase family protein
arTal_v1_Chr2_+_11856571_11856571 6.73 AT2G27820.1
PD1
prephenate dehydratase 1
arTal_v1_Chr5_-_1726932_1727068 6.72 AT5G05740.1
AT5G05740.3
AT5G05740.2
EGY2
ethylene-dependent gravitropism-deficient and yellow-green-like 2
arTal_v1_Chr3_+_22745514_22745514 6.72 AT3G61470.1
LHCA2
photosystem I light harvesting complex protein
arTal_v1_Chr2_+_12014412_12014412 6.72 AT2G28190.1
CSD2
copper/zinc superoxide dismutase 2
arTal_v1_Chr1_-_24974791_24974946 6.69 AT1G66940.2
AT1G66940.4
AT1G66940.1
AT1G66940.3
AT1G66940
kinase-like protein
arTal_v1_Chr5_+_25727126_25727268 6.65 AT5G64330.1
AT5G64330.2
AT5G64330.3
NPH3
Phototropic-responsive NPH3 family protein
arTal_v1_Chr5_+_24240810_24240810 6.65 AT5G60200.1
TMO6
TARGET OF MONOPTEROS 6
arTal_v1_Chr5_+_1130031_1130031 6.63 AT5G04140.2
GLU1
glutamate synthase 1
arTal_v1_Chr3_-_9723904_9723904 6.62 AT3G26520.1
TIP2
tonoplast intrinsic protein 2
arTal_v1_Chr5_+_1129785_1129785 6.62 AT5G04140.1
GLU1
glutamate synthase 1
arTal_v1_Chr5_+_24667873_24667873 6.58 AT5G61350.1
AT5G61350
Protein kinase superfamily protein
arTal_v1_Chr5_+_16151772_16151772 6.57 AT5G40380.3
AT5G40380.2
CRK42
cysteine-rich RLK (RECEPTOR-like protein kinase) 42
arTal_v1_Chr5_+_13949228_13949228 6.57 AT5G35777.1
AT5G35777

arTal_v1_Chr1_+_9259432_9259432 6.52 AT1G26770.1
EXPA10
expansin A10
arTal_v1_Chr4_-_11504739_11504739 6.47 AT4G21650.1
AT4G21650
Subtilase family protein
arTal_v1_Chr1_-_1702749_1702749 6.41 AT1G05675.1
AT1G05675
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr1_+_22699715_22699715 6.39 AT1G61520.3
LHCA3
PSI type III chlorophyll a/b-binding protein
arTal_v1_Chr2_-_12785037_12785037 6.39 AT2G29980.2
FAD3
fatty acid desaturase 3
arTal_v1_Chr1_-_6487153_6487153 6.39 AT1G18810.1
AT1G18810
phytochrome kinase substrate-like protein
arTal_v1_Chr1_+_22700073_22700073 6.38 AT1G61520.2
LHCA3
PSI type III chlorophyll a/b-binding protein
arTal_v1_Chr5_-_9242854_9242854 6.37 AT5G26330.1
AT5G26330
Cupredoxin superfamily protein
arTal_v1_Chr1_+_22699893_22699893 6.37 AT1G61520.1
LHCA3
PSI type III chlorophyll a/b-binding protein
arTal_v1_Chr5_+_23400715_23400715 6.37 AT5G57760.1
AT5G57760
hypothetical protein
arTal_v1_Chr5_+_18894378_18894378 6.34 AT5G46570.1
BSK2
BR-signaling kinase 2
arTal_v1_Chr2_-_1861934_1862064 6.33 AT2G05160.3
AT2G05160.1
AT2G05160.2
AT2G05160
CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein
arTal_v1_Chr2_-_18443405_18443405 6.32 AT2G44740.1
CYCP4%3B1
cyclin p4;1
arTal_v1_Chr1_+_18866197_18866197 6.31 AT1G50900.1
GDC1
Ankyrin repeat family protein
arTal_v1_Chr2_-_12785190_12785190 6.31 AT2G29980.1
FAD3
fatty acid desaturase 3
arTal_v1_Chr3_+_981072_981072 6.30 AT3G03840.1
SAUR27
SAUR-like auxin-responsive protein family
arTal_v1_Chr4_-_18160158_18160158 6.29 AT4G38950.2
AT4G38950.1
AT4G38950.3
AT4G38950
ATP binding microtubule motor family protein
arTal_v1_Chr4_-_17835017_17835017 6.29 AT4G37930.1
SHM1
serine transhydroxymethyltransferase 1
arTal_v1_Chr5_+_23374873_23374874 6.28 AT5G57700.3
AT5G57700.2
AT5G57700.1
AT5G57700.5
AT5G57700
BNR/Asp-box repeat family protein
arTal_v1_Chr3_+_5676749_5676829 6.28 AT3G16660.2
AT3G16660.1
AT3G16660
Pollen Ole e 1 allergen and extensin family protein
arTal_v1_Chr2_+_15445294_15445294 6.27 AT2G36830.1
GAMMA-TIP
gamma tonoplast intrinsic protein
arTal_v1_Chr3_-_10877578_10877578 6.26 AT3G28860.1
ABCB19
ATP binding cassette subfamily B19
arTal_v1_Chr5_+_24167996_24168072 6.25 AT5G60020.1
AT5G60020.2
LAC17
laccase 17
arTal_v1_Chr3_-_22972239_22972303 6.22 AT3G62020.2
AT3G62020.1
GLP10
germin-like protein 10
arTal_v1_Chr1_+_17065858_17065858 6.21 AT1G45130.2
BGAL5
beta-galactosidase 5
arTal_v1_Chr5_+_2446669_2446669 6.21 AT5G07690.1
MYB29
myb domain protein 29

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G10480

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
8.1 24.3 GO:0015840 urea transport(GO:0015840)
7.2 43.1 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
4.4 31.0 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
3.7 18.3 GO:0042550 photosystem I stabilization(GO:0042550)
3.4 30.8 GO:0051513 regulation of monopolar cell growth(GO:0051513)
3.4 13.6 GO:0090308 regulation of methylation-dependent chromatin silencing(GO:0090308) positive regulation of methylation-dependent chromatin silencing(GO:0090309)
3.4 10.2 GO:0042353 fucose biosynthetic process(GO:0042353)
3.1 28.3 GO:1990066 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
3.0 54.7 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
2.9 11.7 GO:0006023 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
2.5 7.6 GO:0035445 borate transmembrane transport(GO:0035445)
2.5 20.3 GO:0010065 primary meristem tissue development(GO:0010065)
2.4 38.9 GO:0015976 carbon utilization(GO:0015976)
2.4 7.1 GO:0035017 cuticle pattern formation(GO:0035017)
2.3 11.6 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
2.2 6.7 GO:0071457 cellular response to ozone(GO:0071457)
2.2 6.6 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
2.2 13.1 GO:0090057 root radial pattern formation(GO:0090057)
2.1 6.3 GO:0010541 acropetal auxin transport(GO:0010541)
2.1 10.3 GO:0042549 photosystem II stabilization(GO:0042549)
2.0 14.2 GO:1904276 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
2.0 8.1 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
2.0 4.0 GO:0090603 sieve element differentiation(GO:0090603)
1.9 7.5 GO:0015669 gas transport(GO:0015669)
1.9 9.4 GO:0006106 fumarate metabolic process(GO:0006106)
1.9 7.4 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
1.8 34.9 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
1.8 7.1 GO:0070509 calcium ion import(GO:0070509)
1.8 8.9 GO:0031022 nuclear migration along microfilament(GO:0031022)
1.7 3.4 GO:0009915 phloem sucrose loading(GO:0009915)
1.7 5.1 GO:0035444 nickel cation transmembrane transport(GO:0035444) cobalt ion homeostasis(GO:0055068)
1.7 5.0 GO:0071258 cellular response to gravity(GO:0071258)
1.7 16.7 GO:0010088 phloem development(GO:0010088)
1.7 8.3 GO:0010226 response to lithium ion(GO:0010226)
1.6 4.9 GO:0010062 negative regulation of cell fate specification(GO:0009996) negative regulation of trichoblast fate specification(GO:0010062) negative regulation of plant epidermal cell differentiation(GO:1903889)
1.6 6.5 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
1.6 4.8 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
1.6 3.2 GO:0043271 negative regulation of ion transport(GO:0043271) negative regulation of transport(GO:0051051)
1.6 3.1 GO:0045793 positive regulation of cell size(GO:0045793)
1.6 48.6 GO:0010025 wax biosynthetic process(GO:0010025)
1.6 9.4 GO:0046087 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
1.6 6.2 GO:0046741 transport of virus in host, tissue to tissue(GO:0046741)
1.5 12.2 GO:0010439 regulation of glucosinolate biosynthetic process(GO:0010439)
1.5 9.1 GO:0010623 programmed cell death involved in cell development(GO:0010623)
1.5 9.1 GO:0006011 UDP-glucose metabolic process(GO:0006011)
1.5 7.4 GO:0071277 cellular response to calcium ion(GO:0071277)
1.5 7.4 GO:0019745 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
1.4 47.8 GO:0005992 trehalose biosynthetic process(GO:0005992)
1.4 4.3 GO:1905157 positive regulation of photosynthesis(GO:1905157)
1.4 4.2 GO:0006658 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
1.4 15.5 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
1.3 9.4 GO:0009803 cinnamic acid metabolic process(GO:0009803)
1.3 22.9 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
1.3 6.7 GO:0006571 tyrosine biosynthetic process(GO:0006571)
1.3 53.3 GO:0009828 plant-type cell wall loosening(GO:0009828)
1.3 1.3 GO:0048656 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
1.3 6.6 GO:0009647 skotomorphogenesis(GO:0009647)
1.3 5.2 GO:0010480 microsporocyte differentiation(GO:0010480)
1.3 9.2 GO:0010106 cellular response to iron ion starvation(GO:0010106)
1.3 6.4 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
1.2 6.2 GO:0051016 barbed-end actin filament capping(GO:0051016)
1.2 4.9 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
1.2 20.9 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
1.2 4.9 GO:1903963 icosanoid secretion(GO:0032309) arachidonic acid secretion(GO:0050482) icosanoid transport(GO:0071715) fatty acid derivative transport(GO:1901571) arachidonate transport(GO:1903963)
1.2 16.8 GO:0009765 photosynthesis, light harvesting(GO:0009765)
1.2 4.8 GO:0055073 cadmium ion homeostasis(GO:0055073)
1.2 7.2 GO:0000719 photoreactive repair(GO:0000719)
1.2 3.5 GO:0080051 cutin transport(GO:0080051)
1.2 7.0 GO:0019408 dolichol biosynthetic process(GO:0019408)
1.2 3.5 GO:0019406 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
1.1 3.4 GO:0031055 chromatin remodeling at centromere(GO:0031055)
1.1 5.7 GO:0042724 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
1.1 24.0 GO:0045493 xylan catabolic process(GO:0045493)
1.1 10.9 GO:0033619 membrane protein proteolysis(GO:0033619)
1.1 15.9 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
1.1 3.2 GO:0048729 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
1.1 8.4 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
1.1 5.3 GO:0009807 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
1.0 4.2 GO:0099636 cytoplasmic streaming(GO:0099636)
1.0 15.6 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
1.0 3.1 GO:0046499 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
1.0 5.1 GO:0006297 nucleotide-excision repair, DNA gap filling(GO:0006297)
1.0 58.8 GO:0019684 photosynthesis, light reaction(GO:0019684)
1.0 6.1 GO:0042659 regulation of cell fate specification(GO:0042659)
1.0 6.0 GO:1904961 quiescent center organization(GO:1904961)
1.0 4.0 GO:0009660 amyloplast organization(GO:0009660)
1.0 4.0 GO:0030322 stabilization of membrane potential(GO:0030322)
1.0 11.9 GO:0032544 plastid translation(GO:0032544)
1.0 4.9 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
1.0 11.7 GO:0030307 positive regulation of cell growth(GO:0030307)
1.0 11.4 GO:0018904 ether metabolic process(GO:0018904)
0.9 4.6 GO:0010359 regulation of anion channel activity(GO:0010359)
0.9 5.5 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.9 2.8 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
0.9 11.8 GO:0005987 sucrose catabolic process(GO:0005987)
0.9 10.9 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.9 5.4 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.9 2.7 GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay(GO:1900151)
0.9 1.8 GO:0032411 positive regulation of transporter activity(GO:0032411) positive regulation of ion transmembrane transporter activity(GO:0032414) positive regulation of anion channel activity(GO:1901529) positive regulation of anion transport(GO:1903793) positive regulation of anion transmembrane transport(GO:1903961)
0.9 14.3 GO:0010315 auxin efflux(GO:0010315)
0.9 4.4 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.9 4.4 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.9 2.6 GO:0033506 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.9 2.6 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.9 4.3 GO:0007043 cell-cell junction assembly(GO:0007043)
0.9 4.3 GO:0019419 sulfate reduction(GO:0019419)
0.9 3.4 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.8 2.5 GO:0017145 stem cell division(GO:0017145)
0.8 11.0 GO:0010109 regulation of photosynthesis(GO:0010109)
0.8 24.6 GO:0006284 base-excision repair(GO:0006284)
0.8 3.3 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.8 8.2 GO:1990937 xylan acetylation(GO:1990937)
0.8 3.3 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.8 9.7 GO:0010588 cotyledon vascular tissue pattern formation(GO:0010588)
0.8 2.4 GO:0042539 hypotonic salinity response(GO:0042539)
0.8 20.8 GO:0009638 phototropism(GO:0009638)
0.8 55.7 GO:0007018 microtubule-based movement(GO:0007018)
0.8 3.2 GO:0030643 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.8 11.8 GO:0030091 protein repair(GO:0030091)
0.8 3.1 GO:0002943 tRNA dihydrouridine synthesis(GO:0002943)
0.8 22.2 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.8 2.3 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.8 1.5 GO:0046683 response to organophosphorus(GO:0046683)
0.8 5.3 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.8 9.8 GO:0009641 shade avoidance(GO:0009641)
0.7 6.0 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.7 2.2 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.7 0.7 GO:0051480 regulation of cytosolic calcium ion concentration(GO:0051480)
0.7 3.6 GO:0048629 trichome patterning(GO:0048629)
0.7 3.6 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.7 0.7 GO:0042391 regulation of membrane potential(GO:0042391)
0.7 2.1 GO:0010446 response to alkaline pH(GO:0010446)
0.7 2.8 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.7 33.9 GO:0015979 photosynthesis(GO:0015979)
0.7 6.1 GO:0043410 positive regulation of MAPK cascade(GO:0043410)
0.7 2.0 GO:0030638 polyketide metabolic process(GO:0030638)
0.7 1.3 GO:0009120 deoxyribonucleoside metabolic process(GO:0009120) thymidine metabolic process(GO:0046104) pyrimidine deoxyribonucleoside metabolic process(GO:0046125)
0.7 13.3 GO:0042335 cuticle development(GO:0042335)
0.7 58.2 GO:0045490 pectin catabolic process(GO:0045490)
0.6 2.6 GO:0045604 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.6 7.8 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.6 7.1 GO:1901348 positive regulation of secondary cell wall biogenesis(GO:1901348)
0.6 10.9 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.6 7.5 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.6 4.9 GO:0034471 rRNA 5'-end processing(GO:0000967) ncRNA 5'-end processing(GO:0034471)
0.6 5.5 GO:0030497 fatty acid elongation(GO:0030497)
0.6 6.1 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) aromatic amino acid family biosynthetic process, prephenate pathway(GO:0009095) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.6 3.0 GO:2000114 regulation of establishment of cell polarity(GO:2000114)
0.6 11.8 GO:0071668 cell wall assembly(GO:0070726) plant-type cell wall assembly(GO:0071668)
0.6 4.1 GO:0009957 epidermal cell fate specification(GO:0009957)
0.6 1.1 GO:1902533 positive regulation of intracellular signal transduction(GO:1902533)
0.6 7.3 GO:0009554 megasporogenesis(GO:0009554)
0.6 4.5 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.6 3.4 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.6 6.7 GO:0009704 de-etiolation(GO:0009704)
0.5 30.8 GO:0007267 cell-cell signaling(GO:0007267)
0.5 10.4 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.5 4.8 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.5 1.6 GO:0010045 response to nickel cation(GO:0010045)
0.5 2.1 GO:0071323 cellular response to chitin(GO:0071323)
0.5 3.7 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
0.5 8.4 GO:0009299 mRNA transcription(GO:0009299)
0.5 1.6 GO:0016094 polyprenol biosynthetic process(GO:0016094)
0.5 1.0 GO:0010338 leaf formation(GO:0010338)
0.5 3.1 GO:0080120 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.5 1.5 GO:0009584 detection of visible light(GO:0009584)
0.5 4.1 GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.5 7.6 GO:0055069 zinc ion homeostasis(GO:0055069)
0.5 2.0 GO:0046949 fatty-acyl-CoA biosynthetic process(GO:0046949)
0.5 1.5 GO:0007000 nucleolus organization(GO:0007000) anisotropic cell growth(GO:0051211)
0.5 4.4 GO:0071249 cellular response to nitrate(GO:0071249)
0.5 3.4 GO:0048446 petal morphogenesis(GO:0048446)
0.5 1.9 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.5 3.4 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.5 1.5 GO:0030855 epidermis development(GO:0008544) epidermal cell differentiation(GO:0009913) epithelial cell differentiation(GO:0030855) epithelium development(GO:0060429)
0.5 1.9 GO:0051336 regulation of hydrolase activity(GO:0051336)
0.5 1.9 GO:2000762 regulation of phenylpropanoid metabolic process(GO:2000762)
0.5 0.5 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.5 12.8 GO:0045492 xylan biosynthetic process(GO:0045492)
0.5 1.9 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.5 1.4 GO:0070150 mitochondrial glycyl-tRNA aminoacylation(GO:0070150)
0.5 2.3 GO:0033386 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.5 0.5 GO:0072501 cellular divalent inorganic anion homeostasis(GO:0072501)
0.5 3.7 GO:0044209 AMP salvage(GO:0044209)
0.5 4.6 GO:0070919 production of siRNA involved in chromatin silencing by small RNA(GO:0070919)
0.5 3.2 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.5 1.8 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.5 12.2 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.4 2.7 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.4 3.1 GO:0046085 adenosine metabolic process(GO:0046085)
0.4 1.7 GO:0034635 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.4 4.4 GO:0052548 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.4 2.6 GO:0010358 leaf shaping(GO:0010358)
0.4 7.7 GO:0015743 malate transport(GO:0015743)
0.4 1.7 GO:0045597 positive regulation of cell differentiation(GO:0045597)
0.4 2.9 GO:0015689 molybdate ion transport(GO:0015689)
0.4 10.3 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.4 1.2 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.4 1.2 GO:1990532 induced systemic resistance, ethylene mediated signaling pathway(GO:0009866) stress response to nickel ion(GO:1990532)
0.4 2.0 GO:0007142 male meiosis II(GO:0007142)
0.4 1.2 GO:0018364 box C/D snoRNA 3'-end processing(GO:0000494) peptidyl-glutamine methylation(GO:0018364) box C/D snoRNA metabolic process(GO:0033967) box C/D snoRNA processing(GO:0034963) histone glutamine methylation(GO:1990258)
0.4 1.2 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.4 3.5 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.4 2.3 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.4 2.7 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.4 1.2 GO:0071281 cellular response to iron ion(GO:0071281)
0.4 6.9 GO:0010152 pollen maturation(GO:0010152)
0.4 2.7 GO:0032204 regulation of telomere maintenance(GO:0032204)
0.4 3.4 GO:0030308 negative regulation of cell growth(GO:0030308)
0.4 1.1 GO:0033477 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.4 4.5 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.4 1.5 GO:0048479 style development(GO:0048479)
0.4 6.6 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.4 1.1 GO:0048639 positive regulation of organ growth(GO:0046622) positive regulation of developmental growth(GO:0048639)
0.4 4.7 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.4 5.1 GO:0045338 farnesyl diphosphate metabolic process(GO:0045338)
0.4 5.4 GO:0010093 specification of floral organ identity(GO:0010093)
0.4 5.7 GO:0006574 valine catabolic process(GO:0006574)
0.3 0.7 GO:0031054 pre-miRNA processing(GO:0031054)
0.3 14.4 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.3 1.4 GO:0080190 secondary growth(GO:0080117) lateral growth(GO:0080190)
0.3 2.4 GO:0044211 CTP salvage(GO:0044211)
0.3 1.7 GO:0032011 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.3 3.0 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.3 2.3 GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.3 0.7 GO:0030242 pexophagy(GO:0030242)
0.3 1.6 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.3 6.5 GO:2000008 regulation of protein localization to cell surface(GO:2000008)
0.3 1.9 GO:0006021 inositol biosynthetic process(GO:0006021)
0.3 5.6 GO:1900865 chloroplast RNA modification(GO:1900865)
0.3 1.2 GO:0006678 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.3 7.7 GO:2000030 regulation of response to red or far red light(GO:2000030)
0.3 2.7 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.3 7.1 GO:0009292 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.3 1.7 GO:0015846 polyamine transport(GO:0015846)
0.3 1.7 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.3 0.9 GO:2000692 negative regulation of seed maturation(GO:2000692)
0.3 12.0 GO:0009567 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.3 0.8 GO:0006768 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.3 4.7 GO:0050821 protein stabilization(GO:0050821)
0.3 1.1 GO:0006808 regulation of nitrogen utilization(GO:0006808)
0.3 1.1 GO:0015739 sialic acid transport(GO:0015739)
0.3 1.6 GO:0009582 detection of external stimulus(GO:0009581) detection of abiotic stimulus(GO:0009582)
0.3 3.1 GO:0008156 negative regulation of DNA replication(GO:0008156) negative regulation of DNA-dependent DNA replication(GO:2000104)
0.3 6.9 GO:0010218 response to far red light(GO:0010218)
0.3 1.3 GO:0006346 methylation-dependent chromatin silencing(GO:0006346)
0.3 21.6 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.2 4.2 GO:0006301 postreplication repair(GO:0006301)
0.2 1.2 GO:0071585 detoxification of cadmium ion(GO:0071585)
0.2 4.0 GO:0006538 glutamate catabolic process(GO:0006538)
0.2 2.0 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.2 1.7 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.2 1.5 GO:0010375 stomatal complex patterning(GO:0010375)
0.2 0.7 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.2 4.0 GO:0048015 phosphatidylinositol-mediated signaling(GO:0048015)
0.2 0.7 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.2 2.1 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.2 0.9 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.2 1.1 GO:1903175 fatty alcohol biosynthetic process(GO:1903175)
0.2 1.6 GO:0010262 somatic embryogenesis(GO:0010262)
0.2 4.5 GO:0043622 cortical microtubule organization(GO:0043622)
0.2 2.0 GO:1905177 tracheary element differentiation(GO:1905177)
0.2 2.9 GO:0055075 potassium ion homeostasis(GO:0055075)
0.2 2.9 GO:0015693 magnesium ion transport(GO:0015693)
0.2 2.0 GO:1990778 protein localization to plasma membrane(GO:0072659) protein localization to cell periphery(GO:1990778)
0.2 3.1 GO:0010332 response to gamma radiation(GO:0010332)
0.2 1.9 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.2 0.8 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.2 6.5 GO:0010582 floral meristem determinacy(GO:0010582)
0.2 3.1 GO:0036297 interstrand cross-link repair(GO:0036297)
0.2 2.3 GO:0018126 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.2 2.3 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.2 2.8 GO:0006298 mismatch repair(GO:0006298)
0.2 1.4 GO:0010449 root meristem growth(GO:0010449)
0.2 8.6 GO:0071482 cellular response to light stimulus(GO:0071482)
0.2 2.7 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.2 1.7 GO:0042793 transcription from plastid promoter(GO:0042793)
0.2 1.1 GO:0006893 Golgi to plasma membrane transport(GO:0006893)
0.2 0.9 GO:0051103 DNA ligation involved in DNA repair(GO:0051103)
0.2 4.1 GO:0009958 positive gravitropism(GO:0009958)
0.2 3.0 GO:0006782 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.2 1.1 GO:0008655 pyrimidine-containing compound salvage(GO:0008655) pyrimidine nucleobase salvage(GO:0043100)
0.2 4.2 GO:0090630 activation of GTPase activity(GO:0090630)
0.2 8.0 GO:0019759 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.2 1.8 GO:0036065 fucosylation(GO:0036065)
0.2 4.0 GO:0046470 phosphatidylcholine metabolic process(GO:0046470)
0.2 22.5 GO:0009860 pollen tube growth(GO:0009860)
0.2 0.5 GO:0030031 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
0.2 6.1 GO:0010075 regulation of meristem growth(GO:0010075)
0.2 29.4 GO:0046777 protein autophosphorylation(GO:0046777)
0.2 1.6 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.2 0.3 GO:2000082 regulation of vitamin metabolic process(GO:0030656) regulation of L-ascorbic acid biosynthetic process(GO:2000082)
0.2 0.5 GO:1990570 GDP-mannose transport(GO:0015784) purine nucleotide-sugar transport(GO:0036079) purine nucleotide-sugar transmembrane transport(GO:0090480) GDP-mannose transmembrane transport(GO:1990570)
0.2 2.2 GO:0010274 hydrotropism(GO:0010274)
0.2 4.1 GO:0006275 regulation of DNA replication(GO:0006275)
0.2 1.8 GO:0010212 response to ionizing radiation(GO:0010212)
0.2 3.5 GO:0009668 plastid membrane organization(GO:0009668)
0.2 4.4 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.2 0.6 GO:0019427 acetyl-CoA biosynthetic process from acetate(GO:0019427)
0.2 3.3 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.2 0.3 GO:0090646 mitochondrial tRNA processing(GO:0090646)
0.2 0.5 GO:0042908 xenobiotic transport(GO:0042908)
0.2 2.4 GO:0009688 abscisic acid biosynthetic process(GO:0009688) apocarotenoid biosynthetic process(GO:0043289) tertiary alcohol biosynthetic process(GO:1902645)
0.2 21.4 GO:0009657 plastid organization(GO:0009657)
0.1 1.8 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.1 4.2 GO:0032543 mitochondrial translation(GO:0032543)
0.1 2.2 GO:0030488 tRNA methylation(GO:0030488)
0.1 7.8 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.1 0.4 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.1 1.4 GO:0070193 synaptonemal complex assembly(GO:0007130) synaptonemal complex organization(GO:0070193)
0.1 0.9 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.1 2.0 GO:0010584 pollen exine formation(GO:0010584)
0.1 0.8 GO:0045595 regulation of cell differentiation(GO:0045595)
0.1 1.3 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.1 1.0 GO:0032456 endocytic recycling(GO:0032456)
0.1 1.8 GO:0006384 transcription initiation from RNA polymerase III promoter(GO:0006384)
0.1 1.7 GO:0000373 Group II intron splicing(GO:0000373)
0.1 0.4 GO:0006430 lysyl-tRNA aminoacylation(GO:0006430)
0.1 3.5 GO:0019915 lipid storage(GO:0019915)
0.1 5.7 GO:0035825 reciprocal meiotic recombination(GO:0007131) reciprocal DNA recombination(GO:0035825)
0.1 0.7 GO:0015824 proline transport(GO:0015824)
0.1 0.6 GO:0042436 indole-containing compound catabolic process(GO:0042436)
0.1 0.6 GO:0015780 nucleotide-sugar transport(GO:0015780)
0.1 1.5 GO:0010257 NADH dehydrogenase complex assembly(GO:0010257)
0.1 1.4 GO:0046654 tetrahydrofolate biosynthetic process(GO:0046654)
0.1 1.0 GO:0009405 pathogenesis(GO:0009405)
0.1 2.8 GO:0048825 cotyledon development(GO:0048825)
0.1 2.0 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.1 1.5 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.1 3.1 GO:0016575 histone deacetylation(GO:0016575)
0.1 3.2 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.1 0.5 GO:0006821 chloride transport(GO:0006821)
0.1 1.0 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.1 1.6 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.1 4.9 GO:0022900 electron transport chain(GO:0022900)
0.1 0.2 GO:0009945 radial axis specification(GO:0009945)
0.1 1.9 GO:0080022 primary root development(GO:0080022)
0.1 0.8 GO:1904668 positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.1 0.2 GO:0000973 posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000973)
0.1 2.1 GO:0016556 mRNA modification(GO:0016556)
0.1 1.8 GO:0009960 endosperm development(GO:0009960)
0.1 0.7 GO:0045116 protein neddylation(GO:0045116)
0.1 1.2 GO:0010183 chemotaxis(GO:0006935) pollen tube guidance(GO:0010183) taxis(GO:0042330) positive chemotaxis(GO:0050918)
0.1 0.3 GO:0048830 adventitious root development(GO:0048830)
0.1 0.9 GO:0001932 regulation of protein phosphorylation(GO:0001932)
0.1 0.7 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.1 0.3 GO:0035067 negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757)
0.1 3.0 GO:0045292 mRNA cis splicing, via spliceosome(GO:0045292)
0.1 2.1 GO:1901800 positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436) positive regulation of proteasomal protein catabolic process(GO:1901800)
0.1 2.8 GO:0009809 lignin biosynthetic process(GO:0009809)
0.1 2.4 GO:0006813 potassium ion transport(GO:0006813)
0.1 0.4 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.1 0.7 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.1 4.3 GO:0010054 trichoblast differentiation(GO:0010054)
0.1 3.0 GO:0006887 exocytosis(GO:0006887)
0.1 0.6 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.1 2.9 GO:0048545 response to steroid hormone(GO:0048545)
0.1 0.3 GO:0097036 regulation of plasma membrane sterol distribution(GO:0097036)
0.1 0.3 GO:0070982 L-asparagine biosynthetic process(GO:0070981) L-asparagine metabolic process(GO:0070982)
0.1 0.4 GO:0098781 ncRNA transcription(GO:0098781)
0.1 2.5 GO:0051302 regulation of cell division(GO:0051302)
0.1 2.0 GO:0006101 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.0 0.8 GO:0005983 starch catabolic process(GO:0005983)
0.0 1.3 GO:0006506 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 2.8 GO:0000725 recombinational repair(GO:0000725)
0.0 1.9 GO:0006414 translational elongation(GO:0006414)
0.0 0.3 GO:0008356 asymmetric cell division(GO:0008356)
0.0 1.1 GO:0006606 protein import into nucleus(GO:0006606) protein targeting to nucleus(GO:0044744)
0.0 2.6 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 0.4 GO:0006108 malate metabolic process(GO:0006108)
0.0 0.2 GO:0042219 glutathione catabolic process(GO:0006751) cellular modified amino acid catabolic process(GO:0042219)
0.0 2.0 GO:0043086 negative regulation of catalytic activity(GO:0043086)
0.0 0.2 GO:0070828 heterochromatin organization(GO:0070828)
0.0 0.6 GO:0006006 glucose metabolic process(GO:0006006)
0.0 0.8 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.3 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.0 1.2 GO:0042274 ribosomal small subunit biogenesis(GO:0042274)
0.0 0.6 GO:0043085 positive regulation of catalytic activity(GO:0043085)
0.0 0.7 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.1 GO:0019346 transsulfuration(GO:0019346) homocysteine metabolic process(GO:0050667)
0.0 0.1 GO:0046208 spermine catabolic process(GO:0046208)
0.0 1.6 GO:0006470 protein dephosphorylation(GO:0006470)
0.0 0.0 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
5.9 17.8 GO:0030093 chloroplast photosystem I(GO:0030093)
4.9 43.7 GO:0030076 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
3.6 3.6 GO:0016328 lateral plasma membrane(GO:0016328)
3.0 23.7 GO:0009538 photosystem I reaction center(GO:0009538)
2.8 14.2 GO:0009897 external side of plasma membrane(GO:0009897)
2.8 14.1 GO:0005960 glycine cleavage complex(GO:0005960)
2.2 6.7 GO:0009522 photosystem I(GO:0009522)
2.2 24.3 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
2.2 6.6 GO:0043667 pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
1.8 5.3 GO:0031390 Ctf18 RFC-like complex(GO:0031390)
1.7 11.6 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
1.7 6.6 GO:0010330 cellulose synthase complex(GO:0010330)
1.6 92.3 GO:0010287 plastoglobule(GO:0010287)
1.6 26.7 GO:0009531 secondary cell wall(GO:0009531)
1.5 24.2 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
1.2 10.9 GO:0071556 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
1.1 63.0 GO:0031977 thylakoid lumen(GO:0031977)
1.1 16.0 GO:0009986 cell surface(GO:0009986)
1.1 3.4 GO:0031021 interphase microtubule organizing center(GO:0031021)
1.1 10.1 GO:0010369 chromocenter(GO:0010369)
0.9 7.5 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.9 11.6 GO:0045298 tubulin complex(GO:0045298)
0.9 2.7 GO:0009501 amyloplast(GO:0009501)
0.8 12.7 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.8 3.3 GO:0032807 DNA ligase IV complex(GO:0032807)
0.8 8.3 GO:0042555 MCM complex(GO:0042555)
0.8 6.6 GO:0035619 root hair tip(GO:0035619)
0.7 7.3 GO:0016272 prefoldin complex(GO:0016272)
0.7 4.4 GO:0009346 citrate lyase complex(GO:0009346)
0.7 2.9 GO:0032044 DSIF complex(GO:0032044)
0.7 14.4 GO:0009508 plastid chromosome(GO:0009508)
0.7 12.6 GO:0031012 extracellular matrix(GO:0031012)
0.7 4.6 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.6 225.8 GO:0009579 thylakoid(GO:0009579)
0.6 1.9 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.6 1.8 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.6 5.3 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.5 3.0 GO:0030139 endocytic vesicle(GO:0030139)
0.5 7.7 GO:0016459 myosin complex(GO:0016459)
0.4 2.7 GO:0045254 pyruvate dehydrogenase complex(GO:0045254)
0.4 3.1 GO:0031261 DNA replication preinitiation complex(GO:0031261)
0.4 1.8 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.4 3.0 GO:0044665 MLL1/2 complex(GO:0044665) MLL1 complex(GO:0071339)
0.4 6.9 GO:0010319 stromule(GO:0010319)
0.4 4.3 GO:0005720 nuclear heterochromatin(GO:0005720)
0.4 9.6 GO:0016324 apical plasma membrane(GO:0016324)
0.4 2.7 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.4 1.1 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.3 1.7 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.3 8.0 GO:0000118 histone deacetylase complex(GO:0000118)
0.3 54.4 GO:0009505 plant-type cell wall(GO:0009505)
0.3 1.9 GO:0032153 cell division site(GO:0032153)
0.3 67.8 GO:0048046 apoplast(GO:0048046)
0.3 23.0 GO:0000138 Golgi trans cisterna(GO:0000138)
0.3 2.8 GO:0072686 mitotic spindle(GO:0072686)
0.2 3.0 GO:0005880 nuclear microtubule(GO:0005880)
0.2 4.6 GO:0000145 exocyst(GO:0000145)
0.2 8.8 GO:0000152 nuclear ubiquitin ligase complex(GO:0000152)
0.2 32.3 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.2 0.6 GO:0009527 plastid outer membrane(GO:0009527)
0.2 0.2 GO:0045177 apical part of cell(GO:0045177)
0.2 2.4 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.2 1.2 GO:0070652 HAUS complex(GO:0070652)
0.2 1.0 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.2 8.0 GO:0005875 microtubule associated complex(GO:0005875)
0.2 1.1 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.2 9.3 GO:0090406 pollen tube(GO:0090406)
0.2 1.7 GO:0030125 clathrin vesicle coat(GO:0030125)
0.2 0.5 GO:0005905 clathrin-coated pit(GO:0005905)
0.2 62.7 GO:0009570 chloroplast stroma(GO:0009570)
0.1 4.9 GO:0008287 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.1 0.9 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.1 7.2 GO:0005874 microtubule(GO:0005874)
0.1 3.5 GO:0005686 U2 snRNP(GO:0005686)
0.1 14.0 GO:0031225 anchored component of membrane(GO:0031225)
0.1 5.7 GO:0032040 small-subunit processome(GO:0032040)
0.1 11.3 GO:0031969 chloroplast membrane(GO:0031969)
0.1 0.5 GO:0000126 transcription factor TFIIIB complex(GO:0000126)
0.1 1.5 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.1 1.0 GO:0032300 mismatch repair complex(GO:0032300)
0.1 0.4 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.1 9.1 GO:0044798 nuclear transcription factor complex(GO:0044798)
0.1 0.5 GO:0031209 SCAR complex(GO:0031209)
0.1 1.7 GO:0000784 nuclear chromosome, telomeric region(GO:0000784)
0.1 1.1 GO:0031965 nuclear membrane(GO:0031965)
0.1 1.8 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.1 0.9 GO:0005663 DNA replication factor C complex(GO:0005663)
0.1 0.2 GO:0044614 nuclear pore cytoplasmic filaments(GO:0044614)
0.1 16.2 GO:0044435 plastid part(GO:0044435)
0.1 0.7 GO:0000419 DNA-directed RNA polymerase V complex(GO:0000419)
0.1 7.7 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.1 0.5 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.1 3.9 GO:0016607 nuclear speck(GO:0016607)
0.0 0.2 GO:0000792 heterochromatin(GO:0000792)
0.0 93.5 GO:0005576 extracellular region(GO:0005576)
0.0 0.2 GO:0000812 Swr1 complex(GO:0000812)
0.0 0.7 GO:0042995 cell projection(GO:0042995)
0.0 0.1 GO:0097361 CIA complex(GO:0097361)
0.0 2.8 GO:0005746 mitochondrial respiratory chain(GO:0005746)
0.0 3.0 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.0 0.2 GO:0030131 clathrin adaptor complex(GO:0030131)
0.0 2.0 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 0.2 GO:0005732 small nucleolar ribonucleoprotein complex(GO:0005732)
0.0 0.3 GO:0046540 U4/U6 x U5 tri-snRNP complex(GO:0046540)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
8.2 24.7 GO:0051738 xanthophyll binding(GO:0051738)
8.2 49.4 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
8.1 24.3 GO:0015204 urea transmembrane transporter activity(GO:0015204)
4.9 19.4 GO:0050162 oxalate oxidase activity(GO:0050162)
4.5 13.6 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
4.3 97.8 GO:0016168 chlorophyll binding(GO:0016168)
4.0 16.0 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
3.7 33.3 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
3.5 14.2 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
3.4 10.3 GO:0010242 oxygen evolving activity(GO:0010242)
3.4 26.9 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
3.2 9.6 GO:0004560 alpha-L-fucosidase activity(GO:0004560)
3.0 9.1 GO:0043425 bHLH transcription factor binding(GO:0043425)
2.8 16.7 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
2.7 8.1 GO:0016041 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
2.5 7.5 GO:0005344 oxygen transporter activity(GO:0005344)
2.4 7.1 GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase(GO:0008839)
2.3 11.7 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
2.3 6.9 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
2.3 11.4 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
2.3 52.2 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
2.2 9.0 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
2.2 11.0 GO:0016463 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
2.1 8.5 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
1.9 7.7 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
1.9 9.6 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
1.9 20.8 GO:0008725 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
1.9 9.4 GO:0004333 fumarate hydratase activity(GO:0004333)
1.9 22.4 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
1.9 13.0 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
1.8 22.1 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
1.8 5.5 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
1.8 7.3 GO:0019156 isoamylase activity(GO:0019156)
1.8 7.1 GO:0046593 mandelonitrile lyase activity(GO:0046593)
1.7 5.1 GO:0015099 cobalt ion transmembrane transporter activity(GO:0015087) nickel cation transmembrane transporter activity(GO:0015099)
1.6 6.5 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
1.6 19.0 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
1.6 9.4 GO:0004126 cytidine deaminase activity(GO:0004126)
1.6 6.2 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
1.5 6.2 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
1.5 7.6 GO:0046715 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
1.5 13.6 GO:0010428 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
1.5 19.7 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
1.5 9.1 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
1.5 7.4 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
1.5 4.4 GO:0004375 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
1.5 5.8 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
1.4 2.8 GO:0047517 1,4-beta-D-xylan synthase activity(GO:0047517)
1.4 19.7 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
1.3 13.3 GO:0002094 polyprenyltransferase activity(GO:0002094)
1.3 5.3 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
1.3 5.2 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
1.3 15.6 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
1.3 6.4 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
1.3 10.2 GO:0042299 lupeol synthase activity(GO:0042299)
1.2 38.9 GO:0004089 carbonate dehydratase activity(GO:0004089)
1.2 4.9 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
1.2 10.9 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
1.2 7.3 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
1.2 3.6 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
1.2 31.1 GO:0004805 trehalose-phosphatase activity(GO:0004805)
1.2 7.2 GO:0003913 DNA photolyase activity(GO:0003913)
1.2 4.8 GO:0047158 sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity(GO:0047158)
1.2 9.4 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
1.2 3.5 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
1.2 3.5 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
1.1 4.6 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
1.1 2.3 GO:0004567 beta-mannosidase activity(GO:0004567)
1.1 15.9 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
1.1 22.5 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
1.1 12.4 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
1.1 6.7 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
1.1 11.8 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
1.1 4.3 GO:0009973 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
1.1 3.2 GO:0035671 enone reductase activity(GO:0035671)
1.0 7.2 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
1.0 3.1 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
1.0 6.1 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
1.0 7.7 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.9 23.7 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.9 11.0 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.9 26.0 GO:0008266 poly(U) RNA binding(GO:0008266)
0.9 9.9 GO:0016161 beta-amylase activity(GO:0016161)
0.9 18.8 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.8 7.5 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.8 2.5 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.8 61.4 GO:0003777 microtubule motor activity(GO:0003777)
0.8 2.5 GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726)
0.8 1.6 GO:0004484 mRNA guanylyltransferase activity(GO:0004484) polynucleotide 5'-phosphatase activity(GO:0004651) RNA guanylyltransferase activity(GO:0008192)
0.8 1.6 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.8 3.2 GO:0080161 auxin transmembrane transporter activity(GO:0080161)
0.8 8.6 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.8 3.1 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.8 2.3 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.7 6.0 GO:0000996 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.7 5.2 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.7 20.0 GO:0008810 cellulase activity(GO:0008810)
0.7 5.2 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.7 4.4 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.7 2.2 GO:0015185 gamma-aminobutyric acid transmembrane transporter activity(GO:0015185)
0.7 4.3 GO:0003909 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.7 2.1 GO:0008061 chitin binding(GO:0008061)
0.7 14.1 GO:0005199 structural constituent of cell wall(GO:0005199)
0.7 2.1 GO:0034596 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.7 1.4 GO:0004557 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
0.7 6.8 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.7 2.7 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.7 10.7 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.7 4.6 GO:0005034 osmosensor activity(GO:0005034)
0.7 4.6 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.7 5.2 GO:0008083 growth factor activity(GO:0008083)
0.7 7.2 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.6 4.5 GO:0052854 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.6 8.3 GO:0000036 ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process(GO:0000036) ACP phosphopantetheine attachment site binding(GO:0044620) prosthetic group binding(GO:0051192)
0.6 5.0 GO:0070568 guanylyltransferase activity(GO:0070568)
0.6 1.9 GO:0019789 SUMO transferase activity(GO:0019789)
0.6 1.8 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.6 39.3 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.6 19.0 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.6 2.8 GO:0034511 U3 snoRNA binding(GO:0034511)
0.6 2.8 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.6 1.7 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.5 9.2 GO:0070628 proteasome binding(GO:0070628)
0.5 3.3 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.5 1.6 GO:0008936 nicotinamidase activity(GO:0008936)
0.5 2.1 GO:0070006 metalloaminopeptidase activity(GO:0070006)
0.5 4.2 GO:0004312 fatty acid synthase activity(GO:0004312)
0.5 3.6 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.5 3.1 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.5 4.6 GO:0030976 thiamine pyrophosphate binding(GO:0030976)
0.5 4.1 GO:0043142 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.5 6.2 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.5 0.9 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.5 1.4 GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity(GO:0003848) dihydropteroate synthase activity(GO:0004156)
0.5 3.7 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.5 2.3 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.4 11.2 GO:0004565 beta-galactosidase activity(GO:0004565) galactosidase activity(GO:0015925)
0.4 1.3 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.4 1.8 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.4 8.2 GO:0016844 strictosidine synthase activity(GO:0016844)
0.4 1.7 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.4 8.2 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.4 5.9 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.4 2.5 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.4 1.7 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.4 2.9 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.4 2.5 GO:0045431 flavonol synthase activity(GO:0045431)
0.4 26.0 GO:0043621 protein self-association(GO:0043621)
0.4 1.2 GO:0036009 protein-glutamine N-methyltransferase activity(GO:0036009) histone-glutamine methyltransferase activity(GO:1990259)
0.4 4.0 GO:0003906 DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906)
0.4 2.4 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.4 2.4 GO:0019904 protein domain specific binding(GO:0019904)
0.4 9.0 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.4 6.3 GO:0008146 sulfotransferase activity(GO:0008146)
0.4 7.0 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.4 1.9 GO:0000048 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.4 3.9 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.4 25.6 GO:0004650 polygalacturonase activity(GO:0004650)
0.4 2.7 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.4 6.5 GO:0008420 CTD phosphatase activity(GO:0008420)
0.4 1.1 GO:0047150 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.4 1.9 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.4 1.9 GO:0010179 IAA-Ala conjugate hydrolase activity(GO:0010179)
0.4 2.6 GO:0010011 auxin binding(GO:0010011)
0.4 1.8 GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity(GO:0017176)
0.4 14.6 GO:0016759 cellulose synthase activity(GO:0016759)
0.4 2.5 GO:0016151 nickel cation binding(GO:0016151)
0.4 1.8 GO:0036440 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.4 1.4 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.3 17.5 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.3 2.4 GO:0004849 uridine kinase activity(GO:0004849)
0.3 6.1 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.3 1.7 GO:0010313 phytochrome binding(GO:0010313)
0.3 2.0 GO:0004310 farnesyl-diphosphate farnesyltransferase activity(GO:0004310) squalene synthase activity(GO:0051996)
0.3 1.6 GO:0016724 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.3 3.8 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.3 0.6 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.3 35.2 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.3 4.4 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.3 2.8 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.3 1.2 GO:0004348 glucosylceramidase activity(GO:0004348)
0.3 1.2 GO:0050291 sphingosine N-acyltransferase activity(GO:0050291)
0.3 1.8 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.3 2.4 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.3 1.8 GO:0008199 ferric iron binding(GO:0008199)
0.3 2.3 GO:0004337 geranyltranstransferase activity(GO:0004337)
0.3 2.9 GO:0015197 peptide transporter activity(GO:0015197) oligopeptide transporter activity(GO:0015198)
0.3 6.8 GO:0004568 chitinase activity(GO:0004568)
0.3 3.7 GO:0015038 peptide disulfide oxidoreductase activity(GO:0015037) glutathione disulfide oxidoreductase activity(GO:0015038)
0.3 2.7 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.3 3.0 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.3 1.1 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.3 2.7 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.3 1.8 GO:0032977 membrane insertase activity(GO:0032977)
0.3 2.0 GO:0004340 glucokinase activity(GO:0004340) glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.3 0.8 GO:0004477 methenyltetrahydrofolate cyclohydrolase activity(GO:0004477) methylenetetrahydrofolate dehydrogenase (NADP+) activity(GO:0004488)
0.2 8.2 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.2 1.5 GO:0048487 beta-tubulin binding(GO:0048487)
0.2 1.9 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.2 1.0 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.2 11.1 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.2 2.4 GO:0016872 intramolecular lyase activity(GO:0016872)
0.2 1.2 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.2 5.3 GO:0030276 clathrin binding(GO:0030276)
0.2 0.7 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.2 1.1 GO:0008172 S-methyltransferase activity(GO:0008172)
0.2 1.4 GO:0051117 ATPase binding(GO:0051117)
0.2 8.2 GO:0045735 nutrient reservoir activity(GO:0045735)
0.2 1.1 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.2 2.9 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.2 0.7 GO:0004046 aminoacylase activity(GO:0004046)
0.2 5.4 GO:0031386 protein tag(GO:0031386)
0.2 4.4 GO:0060090 binding, bridging(GO:0060090)
0.2 0.7 GO:0001032 polymerase III regulatory region sequence-specific DNA binding(GO:0000992) RNA polymerase III type 3 promoter sequence-specific DNA binding(GO:0001006) RNA polymerase III regulatory region DNA binding(GO:0001016) RNA polymerase III type 3 promoter DNA binding(GO:0001032)
0.2 9.5 GO:0015079 potassium ion transmembrane transporter activity(GO:0015079)
0.2 0.9 GO:0000213 tRNA-intron endonuclease activity(GO:0000213)
0.2 0.8 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.2 7.9 GO:0003714 transcription corepressor activity(GO:0003714)
0.2 2.9 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.2 6.9 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.2 57.4 GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding(GO:0000981)
0.2 0.6 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.2 2.1 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.2 2.8 GO:0030983 mismatched DNA binding(GO:0030983)
0.2 0.7 GO:0047215 indole-3-acetate beta-glucosyltransferase activity(GO:0047215)
0.2 1.7 GO:0017022 myosin binding(GO:0017022)
0.2 0.7 GO:0019825 oxygen binding(GO:0019825)
0.2 0.5 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.2 0.5 GO:0005458 GDP-mannose transmembrane transporter activity(GO:0005458)
0.2 4.5 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.2 1.8 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.2 1.2 GO:0043495 protein anchor(GO:0043495)
0.2 2.2 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.2 0.8 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.2 3.0 GO:0030599 pectinesterase activity(GO:0030599)
0.2 1.4 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.2 1.4 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.2 1.6 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.2 3.6 GO:0010427 abscisic acid binding(GO:0010427)
0.1 4.6 GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor(GO:0016655)
0.1 1.9 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.1 27.2 GO:0008168 methyltransferase activity(GO:0008168)
0.1 4.2 GO:0000146 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.1 0.4 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
0.1 1.8 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.1 1.8 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.1 0.4 GO:0004824 lysine-tRNA ligase activity(GO:0004824)
0.1 0.6 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.1 1.5 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.1 2.5 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.1 2.9 GO:0010181 FMN binding(GO:0010181)
0.1 1.1 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.1 0.6 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.1 0.5 GO:0004075 biotin carboxylase activity(GO:0004075)
0.1 0.5 GO:0042562 hormone binding(GO:0042562)
0.1 1.8 GO:0030145 manganese ion binding(GO:0030145)
0.1 5.6 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.1 2.2 GO:0015248 sterol transporter activity(GO:0015248)
0.1 0.5 GO:1990269 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.1 0.9 GO:0030151 molybdenum ion binding(GO:0030151)
0.1 0.3 GO:0080104 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.1 3.1 GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor(GO:0016628)
0.1 0.7 GO:0032266 phosphatidylinositol-3-phosphate binding(GO:0032266)
0.1 0.3 GO:0004071 aspartate-ammonia ligase activity(GO:0004071)
0.1 0.5 GO:0048365 Rac GTPase binding(GO:0048365)
0.1 1.6 GO:0008144 drug binding(GO:0008144) cyclosporin A binding(GO:0016018)
0.1 5.2 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.1 0.8 GO:0015140 malate transmembrane transporter activity(GO:0015140)
0.1 0.6 GO:0004619 phosphoglycerate mutase activity(GO:0004619)
0.1 4.4 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.1 1.3 GO:0016405 CoA-ligase activity(GO:0016405)
0.1 0.7 GO:0008494 translation activator activity(GO:0008494) translation regulator activity, nucleic acid binding(GO:0090079) mitochondrial ribosome binding(GO:0097177)
0.1 1.0 GO:0008327 methyl-CpG binding(GO:0008327)
0.1 1.1 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.1 3.3 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 0.8 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.1 0.5 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.1 0.4 GO:0015665 alcohol transmembrane transporter activity(GO:0015665)
0.1 6.7 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.1 0.7 GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.1 0.2 GO:0010521 telomerase inhibitor activity(GO:0010521)
0.1 2.2 GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds(GO:0016799)
0.1 3.4 GO:0003743 translation initiation factor activity(GO:0003743)
0.1 1.5 GO:0009975 cyclase activity(GO:0009975)
0.1 0.5 GO:0004435 phosphatidylinositol phospholipase C activity(GO:0004435)
0.0 0.7 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.0 2.4 GO:0016876 aminoacyl-tRNA ligase activity(GO:0004812) ligase activity, forming carbon-oxygen bonds(GO:0016875) ligase activity, forming aminoacyl-tRNA and related compounds(GO:0016876)
0.0 7.5 GO:0043531 ADP binding(GO:0043531)
0.0 0.1 GO:0004353 glutamate dehydrogenase [NAD(P)+] activity(GO:0004353)
0.0 7.3 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.1 GO:0042392 sphingosine-1-phosphate phosphatase activity(GO:0042392) lipid phosphatase activity(GO:0042577)
0.0 0.1 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.0 1.4 GO:0005096 GTPase activator activity(GO:0005096)
0.0 0.2 GO:0004180 carboxypeptidase activity(GO:0004180)
0.0 4.2 GO:0030234 enzyme regulator activity(GO:0030234)
0.0 0.2 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.0 0.8 GO:0003678 DNA helicase activity(GO:0003678)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.5 1.5 PID IFNG PATHWAY IFN-gamma pathway
1.4 8.7 PID AP1 PATHWAY AP-1 transcription factor network
0.8 5.1 PID IL8 CXCR2 PATHWAY IL8- and CXCR2-mediated signaling events
0.6 1.9 PID HIV NEF PATHWAY HIV-1 Nef: Negative effector of Fas and TNF-alpha
0.6 4.4 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.5 2.4 PID IL2 PI3K PATHWAY IL2 signaling events mediated by PI3K
0.5 1.8 PID DELTA NP63 PATHWAY Validated transcriptional targets of deltaNp63 isoforms
0.4 2.9 NABA CORE MATRISOME Ensemble of genes encoding core extracellular matrix including ECM glycoproteins, collagens and proteoglycans
0.4 2.1 PID ERA GENOMIC PATHWAY Validated nuclear estrogen receptor alpha network
0.4 2.8 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.4 1.4 PID NOTCH PATHWAY Notch signaling pathway
0.3 0.8 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.3 1.1 PID HDAC CLASSI PATHWAY Signaling events mediated by HDAC Class I
0.2 1.0 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
4.3 25.7 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
1.6 7.8 REACTOME PHASE II CONJUGATION Genes involved in Phase II conjugation
1.5 4.4 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
1.1 3.4 REACTOME NUCLEOTIDE BINDING DOMAIN LEUCINE RICH REPEAT CONTAINING RECEPTOR NLR SIGNALING PATHWAYS Genes involved in Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways
1.0 5.0 REACTOME MHC CLASS II ANTIGEN PRESENTATION Genes involved in MHC class II antigen presentation
0.9 4.6 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.8 2.5 REACTOME GASTRIN CREB SIGNALLING PATHWAY VIA PKC AND MAPK Genes involved in Gastrin-CREB signalling pathway via PKC and MAPK
0.8 2.4 REACTOME PKB MEDIATED EVENTS Genes involved in PKB-mediated events
0.7 5.8 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.6 1.8 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.6 4.1 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.4 1.4 REACTOME SIGNALING BY NOTCH1 Genes involved in Signaling by NOTCH1
0.3 6.9 REACTOME INFLUENZA VIRAL RNA TRANSCRIPTION AND REPLICATION Genes involved in Influenza Viral RNA Transcription and Replication
0.2 1.2 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.2 0.8 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.2 2.4 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.1 REACTOME SIGNALING BY PDGF Genes involved in Signaling by PDGF
0.0 0.1 REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS Genes involved in Homologous recombination repair of replication-independent double-strand breaks