ISMARA results: AT3G27920_AT5G41315

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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT3G27920_AT5G41315

Z-value: 0.29

Transcription factors associated with AT3G27920_AT5G41315

Gene Symbol	Gene ID	Gene Info
AT3G27920 TAIR	AT3G27920	myb domain protein 0
AT5G41315 TAIR	AT5G41315	basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
GL3	arTal_v1_Chr5_+_16529455_16529455	-0.58	1.2e-03	Click!
MYB0	arTal_v1_Chr3_-_10363607_10363607	-0.42	2.5e-02	Click!

Activity profile of AT3G27920_AT5G41315 motif

Sorted Z-values of AT3G27920_AT5G41315 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
arTal_v1_Chr2_-_11173278_11173278 Show fit	1.04	AT2G26250.1	KCS10 TAIR Show fit	3-ketoacyl-CoA synthase 10
arTal_v1_Chr5_+_21582614_21582614 Show fit	0.97	AT5G53200.1	TRY TAIR Show fit	Homeodomain-like superfamily protein
arTal_v1_Chr3_-_18883033_18883033 Show fit	0.95	AT3G50800.1	AT3G50800 TAIR Show fit	hypothetical protein
arTal_v1_Chr3_-_18882172_18882237 Show fit	0.61	AT3G50790.2 AT3G50790.1	AT3G50790 TAIR Show fit	esterase/lipase/thioesterase family protein
arTal_v1_Chr1_+_30037376_30037431 Show fit	0.54	AT1G79840.1 AT1G79840.5 AT1G79840.4	GL2 TAIR Show fit	HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein
arTal_v1_Chr4_-_219781_219926 Show fit	0.47	AT4G00480.2 AT4G00480.3 AT4G00480.1	ATMYC1 TAIR Show fit	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr4_+_11211244_11211244 Show fit	0.44	AT4G20960.1	PyrD TAIR Show fit	Cytidine/deoxycytidylate deaminase family protein
arTal_v1_Chr1_+_30036956_30036956 Show fit	0.43	AT1G79840.3 AT1G79840.2	GL2 TAIR Show fit	HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein
arTal_v1_Chr1_+_30037640_30037640 Show fit	0.35	AT1G79840.6	GL2 TAIR Show fit	HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein
arTal_v1_Chr2_-_19050369_19050369 Show fit	0.29	AT2G46410.1	CPC TAIR Show fit	Homeodomain-like superfamily protein

Showing 1 to 10 of 15 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G27920_AT5G41315

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.4	1.3	GO:0009996	negative regulation of cell fate specification(GO:0009996) negative regulation of trichoblast fate specification(GO:0010062) negative regulation of plant epidermal cell differentiation(GO:1903889)
0.1	1.2	GO:0008544	epidermis development(GO:0008544) epidermal cell differentiation(GO:0009913) epithelial cell differentiation(GO:0030855)
0.0	1.0	GO:0010091	trichome branching(GO:0010091)
0.1	0.6	GO:0048629	trichome patterning(GO:0048629)
0.1	0.4	GO:0007023	post-chaperonin tubulin folding pathway(GO:0007023)
0.0	0.4	GO:0009231	riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.1	0.3	GO:0042660	positive regulation of trichoblast fate specification(GO:0010063) positive regulation of cell fate specification(GO:0042660) positive regulation of plant epidermal cell differentiation(GO:1903890)

Showing 1 to 7 of 7 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	1.0	GO:0102336	3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.1	0.6	GO:0047372	acylglycerol lipase activity(GO:0047372)
0.1	0.4	GO:0008835	diaminohydroxyphosphoribosylaminopyrimidine deaminase activity(GO:0008835)
0.1	0.4	GO:0048487	beta-tubulin binding(GO:0048487)

Showing 1 to 4 of 4 entries