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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT3G47500

Z-value: 0.92

Transcription factors associated with AT3G47500

Gene Symbol Gene ID Gene Info
AT3G47500
AT3G47500 cycling DOF factor 3

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
CDF3arTal_v1_Chr3_-_17506124_175061240.311.1e-01Click!

Activity profile of AT3G47500 motif

Sorted Z-values of AT3G47500 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr3_+_15983199_15983199 4.72 AT3G44300.1
NIT2
nitrilase 2
arTal_v1_Chr1_+_30150897_30151006 4.09 AT1G80160.3
AT1G80160.1
AT1G80160.2
GLYI7
Lactoylglutathione lyase / glyoxalase I family protein
arTal_v1_Chr2_+_18641563_18641563 3.52 AT2G45210.1
SAUR36
SAUR-like auxin-responsive protein family
arTal_v1_Chr4_+_8908763_8908879 3.43 AT4G15610.1
AT4G15610.2
AT4G15610
Uncharacterized protein family (UPF0497)
arTal_v1_Chr5_+_16290386_16290386 3.29 AT5G40690.1
AT5G40690
histone-lysine N-methyltransferase trithorax-like protein
arTal_v1_Chr3_+_5234457_5234457 3.28 AT3G15500.1
NAC3
NAC domain containing protein 3
arTal_v1_Chr1_-_30053936_30053936 3.26 AT1G79900.1
BAC2
Mitochondrial substrate carrier family protein
arTal_v1_Chr1_+_5820080_5820080 3.21 AT1G17020.1
SRG1
senescence-related gene 1
arTal_v1_Chr5_-_216773_216773 2.95 AT5G01550.1
LECRKA4.2
lectin receptor kinase a4.1
arTal_v1_Chr4_-_7026224_7026224 2.93 AT4G11650.1
OSM34
osmotin 34
arTal_v1_Chr3_+_22216540_22216540 2.89 AT3G60140.2
AT3G60140.1
DIN2
Glycosyl hydrolase superfamily protein
arTal_v1_Chr2_+_6244772_6244772 2.80 AT2G14620.2
AT2G14620.3
AT2G14620.1
XTH10
xyloglucan endotransglucosylase/hydrolase 10
arTal_v1_Chr3_-_1063103_1063234 2.73 AT3G04070.2
AT3G04070.1
NAC047
NAC domain containing protein 47
arTal_v1_Chr3_+_9892791_9892791 2.70 AT3G26840.1
PES2
Esterase/lipase/thioesterase family protein
arTal_v1_Chr2_-_18646606_18646606 2.70 AT2G45220.1
AT2G45220
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr3_+_4109375_4109375 2.69 AT3G12910.1
AT3G12910
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
arTal_v1_Chr5_+_20455317_20455317 2.69 AT5G50260.1
CEP1
Cysteine proteinases superfamily protein
arTal_v1_Chr4_+_10974456_10974510 2.68 AT4G20320.2
AT4G20320.4
AT4G20320.3
AT4G20320.1
AT4G20320.5
AT4G20320.6
AT4G20320
CTP synthase family protein
arTal_v1_Chr4_+_13653579_13653579 2.68 AT4G27260.1
WES1
Auxin-responsive GH3 family protein
arTal_v1_Chr5_-_4151201_4151201 2.66 AT5G13080.1
WRKY75
WRKY DNA-binding protein 75
arTal_v1_Chr1_+_21652988_21652988 2.66 AT1G58340.1
ZF14
MATE efflux family protein
arTal_v1_Chr1_-_1996355_1996355 2.66 AT1G06520.1
GPAT1
glycerol-3-phosphate acyltransferase 1
arTal_v1_Chr5_-_23896702_23896702 2.63 AT5G59220.2
HAI1
PP2C protein (Clade A protein phosphatases type 2C)
arTal_v1_Chr2_-_11980003_11980003 2.63 AT2G28110.1
FRA8
Exostosin family protein
arTal_v1_Chr4_-_15991536_15991633 2.61 AT4G33150.1
AT4G33150.2
AT4G33150
lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme
arTal_v1_Chr5_-_23896939_23896939 2.59 AT5G59220.1
HAI1
PP2C protein (Clade A protein phosphatases type 2C)
arTal_v1_Chr3_-_19564195_19564195 2.59 AT3G52780.2
PAP20
Purple acid phosphatases superfamily protein
arTal_v1_Chr3_-_19564350_19564350 2.55 AT3G52780.1
PAP20
Purple acid phosphatases superfamily protein
arTal_v1_Chr1_-_4571229_4571229 2.54 AT1G13340.1
AT1G13340
Regulator of Vps4 activity in the MVB pathway protein
arTal_v1_Chr1_-_27834207_27834207 2.53 AT1G74010.1
AT1G74010
Calcium-dependent phosphotriesterase superfamily protein
arTal_v1_Chr5_+_579744_579852 2.51 AT5G02580.1
AT5G02580.3
AT5G02580.2
AT5G02580
argininosuccinate lyase
arTal_v1_Chr3_+_18940643_18940643 2.49 AT3G50970.1
LTI30
dehydrin family protein
arTal_v1_Chr1_+_5389952_5389952 2.46 AT1G15670.1
AT1G15670
Galactose oxidase/kelch repeat superfamily protein
arTal_v1_Chr3_+_4603885_4603885 2.45 AT3G13950.1
AT3G13950
ankyrin
arTal_v1_Chr2_+_17251819_17251819 2.38 AT2G41380.1
AT2G41380
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr3_+_6089381_6089381 2.37 AT3G17790.1
PAP17
purple acid phosphatase 17
arTal_v1_Chr2_-_19166949_19166967 2.37 AT2G46680.2
AT2G46680.1
HB-7
homeobox 7
arTal_v1_Chr5_-_15859911_15859911 2.35 AT5G39610.1
NAC6
NAC domain containing protein 6
arTal_v1_Chr4_-_15988441_15988441 2.35 AT4G33150.3
AT4G33150
lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme
arTal_v1_Chr2_-_12629640_12629640 2.33 AT2G29470.1
GSTU3
glutathione S-transferase tau 3
arTal_v1_Chr3_-_1055196_1055196 2.31 AT3G04060.1
NAC046
NAC domain containing protein 46
arTal_v1_Chr4_-_15991202_15991202 2.30 AT4G33150.4
AT4G33150
lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme
arTal_v1_Chr1_-_26338818_26338818 2.28 AT1G69930.1
GSTU11
glutathione S-transferase TAU 11
arTal_v1_Chr3_-_3993886_3993886 2.28 AT3G12580.1
HSP70
heat shock protein 70
arTal_v1_Chr3_+_6097201_6097201 2.27 AT3G17820.1
GLN1.3
glutamine synthetase 1.3
arTal_v1_Chr1_+_2867203_2867271 2.27 AT1G08920.1
AT1G08920.2
AT1G08920.3
ESL1
ERD (early response to dehydration) six-like 1
arTal_v1_Chr4_+_6491017_6491017 2.26 AT4G10500.1
AT4G10500
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr5_-_25089603_25089626 2.24 AT5G62480.3
AT5G62480.2
AT5G62480.1
GSTU9
glutathione S-transferase tau 9
arTal_v1_Chr2_+_13677986_13677986 2.21 AT2G32210.3
AT2G32210.2
AT2G32210.1
AT2G32210
cysteine-rich/transmembrane domain A-like protein
arTal_v1_Chr4_-_6718550_6718550 2.18 AT4G10960.1
UGE5
UDP-D-glucose/UDP-D-galactose 4-epimerase 5
arTal_v1_Chr4_-_9393650_9393650 2.18 AT4G16690.1
MES16
methyl esterase 16
arTal_v1_Chr3_-_18241341_18241341 2.16 AT3G49210.2
AT3G49210
O-acyltransferase (WSD1-like) family protein
arTal_v1_Chr3_+_3249513_3249526 2.16 AT3G10450.3
AT3G10450.2
AT3G10450.1
AT3G10450.4
SCPL7
serine carboxypeptidase-like 7
arTal_v1_Chr3_+_23289243_23289243 2.15 AT3G63010.1
GID1B
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr3_-_18241524_18241524 2.13 AT3G49210.1
AT3G49210
O-acyltransferase (WSD1-like) family protein
arTal_v1_Chr3_+_19239305_19239412 2.11 AT3G51860.1
AT3G51860.2
CAX3
cation exchanger 3
arTal_v1_Chr5_-_2079005_2079005 2.10 AT5G06720.1
PA2
peroxidase 2
arTal_v1_Chr3_-_8119490_8119490 2.06 AT3G22910.1
AT3G22910
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
arTal_v1_Chr5_-_26531176_26531176 2.06 AT5G66440.1
AT5G66440
tRNA-methyltransferase non-catalytic subunit trm6MTase subunit
arTal_v1_Chr1_+_28291698_28291698 2.05 AT1G75390.1
AT1G75390.2
bZIP44
basic leucine-zipper 44
arTal_v1_Chr1_-_612324_612324 2.04 AT1G02790.1
PGA4
polygalacturonase 4
arTal_v1_Chr5_-_26096114_26096114 2.03 AT5G65300.1
AT5G65300
hypothetical protein
arTal_v1_Chr1_-_28991385_28991454 2.02 AT1G77145.2
AT1G77145.1
AT1G77145
transmembrane protein, putative (DUF506)
arTal_v1_Chr1_+_6515373_6515373 2.02 AT1G18870.1
AT1G18870.3
ICS2
isochorismate synthase 2
arTal_v1_Chr4_+_994726_994726 2.00 AT4G02280.1
SUS3
sucrose synthase 3
arTal_v1_Chr2_-_18463533_18463533 2.00 AT2G44790.1
UCC2
uclacyanin 2
arTal_v1_Chr4_+_131422_131422 1.98 AT4G00305.1
AT4G00305
RING/U-box superfamily protein
arTal_v1_Chr5_-_552827_552827 1.95 AT5G02490.1
Hsp70-2
Heat shock protein 70 (Hsp 70) family protein
arTal_v1_Chr1_-_7534927_7534927 1.95 AT1G21520.1
AT1G21520
hypothetical protein
arTal_v1_Chr2_+_16460247_16460247 1.95 AT2G39420.1
AT2G39420
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr2_+_16747831_16747873 1.95 AT2G40110.1
AT2G40110.3
AT2G40110.2
AT2G40110.4
AT2G40110
Yippee family putative zinc-binding protein
arTal_v1_Chr5_-_24702761_24702787 1.94 AT5G61430.2
AT5G61430.1
NAC100
NAC domain containing protein 100
arTal_v1_Chr5_-_18804056_18804056 1.93 AT5G46350.1
WRKY8
WRKY DNA-binding protein 8
arTal_v1_Chr5_+_16301072_16301072 1.92 AT5G40730.1
AGP24
arabinogalactan protein 24
arTal_v1_Chr2_+_17850292_17850292 1.91 AT2G42890.2
ML2
MEI2-like 2
arTal_v1_Chr4_-_15507176_15507312 1.90 AT4G32070.2
AT4G32070.1
Phox4
Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
arTal_v1_Chr2_+_17849978_17849978 1.89 AT2G42890.3
ML2
MEI2-like 2
arTal_v1_Chr3_-_23298534_23298534 1.88 AT3G63050.1
AT3G63050
hypothetical protein
arTal_v1_Chr1_+_10537648_10537648 1.88 AT1G30040.2
GA2OX2
gibberellin 2-oxidase
arTal_v1_Chr3_-_20361560_20361560 1.88 AT3G54950.1
pPLAIIIbeta
patatin-like protein 6
arTal_v1_Chr1_+_7434235_7434272 1.87 AT1G21240.1
AT1G21240.2
WAK3
wall associated kinase 3
arTal_v1_Chr1_-_9848015_9848015 1.85 AT1G28190.1
AT1G28190
hypothetical protein
arTal_v1_Chr5_+_25679425_25679432 1.84 AT5G64190.2
AT5G64190.1
AT5G64190
neuronal PAS domain protein
arTal_v1_Chr2_+_17849819_17849819 1.84 AT2G42890.1
ML2
MEI2-like 2
arTal_v1_Chr1_+_8164959_8164959 1.84 AT1G23040.3
AT1G23040.2
AT1G23040
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr1_+_9825169_9825169 1.83 AT1G28130.1
GH3.17
Auxin-responsive GH3 family protein
arTal_v1_Chr3_-_9575215_9575215 1.83 AT3G26170.1
CYP71B19
cytochrome P450, family 71, subfamily B, polypeptide 19
arTal_v1_Chr3_-_10047453_10047453 1.83 AT3G27210.1
AT3G27210
hypothetical protein
arTal_v1_Chr3_+_11033665_11033665 1.82 AT3G29035.1
NAC3
NAC domain containing protein 3
arTal_v1_Chr5_-_5904380_5904380 1.82 AT5G17860.2
CAX7
calcium exchanger 7
arTal_v1_Chr1_+_10537457_10537457 1.81 AT1G30040.1
GA2OX2
gibberellin 2-oxidase
arTal_v1_Chr1_+_8688563_8688563 1.81 AT1G24520.1
BCP1
homolog of Brassica campestris pollen protein 1
arTal_v1_Chr5_-_5904532_5904532 1.81 AT5G17860.1
CAX7
calcium exchanger 7
arTal_v1_Chr1_-_27119918_27119918 1.81 AT1G72070.1
AT1G72070
Chaperone DnaJ-domain superfamily protein
arTal_v1_Chr5_-_20191604_20191604 1.81 AT5G49690.1
AT5G49690
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr3_-_4474364_4474378 1.80 AT3G13672.2
AT3G13672.1
AT3G13672
TRAF-like superfamily protein
arTal_v1_Chr3_-_10790553_10790553 1.80 AT3G28740.1
CYP81D11
Cytochrome P450 superfamily protein
arTal_v1_Chr3_-_6788424_6788424 1.80 AT3G19550.1
AT3G19550
glutamate racemase
arTal_v1_Chr5_+_5995479_5995479 1.79 AT5G18130.2
AT5G18130
transmembrane protein
arTal_v1_Chr2_+_14783254_14783254 1.79 AT2G35070.1
AT2G35070.2
AT2G35070
transmembrane protein
arTal_v1_Chr1_+_9825914_9825914 1.79 AT1G28130.2
GH3.17
Auxin-responsive GH3 family protein
arTal_v1_Chr5_+_5995323_5995323 1.78 AT5G18130.1
AT5G18130
transmembrane protein
arTal_v1_Chr1_-_27466348_27466348 1.78 AT1G73010.1
PS2
inorganic pyrophosphatase 1
arTal_v1_Chr3_-_21834514_21834514 1.77 AT3G59070.1
AT3G59070
Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein
arTal_v1_Chr3_+_4036945_4037070 1.75 AT3G12700.1
AT3G12700.3
AT3G12700.2
NANA
Eukaryotic aspartyl protease family protein
arTal_v1_Chr3_+_9685932_9685932 1.75 AT3G26470.1
AT3G26470
Powdery mildew resistance protein, RPW8 domain-containing protein
arTal_v1_Chr5_+_19381519_19381519 1.74 AT5G47860.1
AT5G47860
Gut esterase (DUF1350)
arTal_v1_Chr5_+_8202919_8203003 1.74 AT5G24200.1
AT5G24200.2
AT5G24200.3
AT5G24200
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr5_-_8972125_8972125 1.74 AT5G25770.2
AT5G25770.1
AT5G25770.3
AT5G25770
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr3_+_21380648_21380648 1.73 AT3G57680.1
AT3G57680.2
AT3G57680
Peptidase S41 family protein
arTal_v1_Chr3_+_18465318_18465318 1.73 AT3G49780.1
PSK4
phytosulfokine 4 precursor
arTal_v1_Chr1_+_9483157_9483157 1.73 AT1G27300.1
AT1G27300
transmembrane protein
arTal_v1_Chr2_-_10127589_10127589 1.73 AT2G23790.1
AT2G23790
calcium uniporter (DUF607)
arTal_v1_Chr2_+_6893949_6893949 1.73 AT2G15830.1
AT2G15830
hypothetical protein
arTal_v1_Chr2_-_7707954_7707954 1.72 AT2G17740.1
AT2G17740
Cysteine/Histidine-rich C1 domain family protein
arTal_v1_Chr1_-_22715448_22715448 1.72 AT1G61563.1
RALFL8
ralf-like 8
arTal_v1_Chr3_-_4654046_4654046 1.72 AT3G14050.1
RSH2
RELA/SPOT homolog 2
arTal_v1_Chr2_-_12905338_12905338 1.72 AT2G30250.1
WRKY25
WRKY DNA-binding protein 25
arTal_v1_Chr1_+_8164782_8164782 1.71 AT1G23040.1
AT1G23040
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr3_-_1660380_1660429 1.71 AT3G05675.3
AT3G05675.2
AT3G05675.1
AT3G05675
BTB/POZ domain-containing protein
arTal_v1_Chr3_-_7818985_7818985 1.71 AT3G22160.1
AT3G22160
VQ motif-containing protein
arTal_v1_Chr1_-_28767517_28767517 1.71 AT1G76650.2
CML38
calmodulin-like 38
arTal_v1_Chr1_+_6515644_6515644 1.71 AT1G18870.2
ICS2
isochorismate synthase 2
arTal_v1_Chr2_-_17806073_17806073 1.70 AT2G42790.1
CSY3
citrate synthase 3
arTal_v1_Chr4_-_8095749_8095749 1.70 AT4G14020.1
AT4G14020
Rapid alkalinization factor (RALF) family protein
arTal_v1_Chr2_-_7910040_7910040 1.69 AT2G18170.1
MPK7
MAP kinase 7
arTal_v1_Chr5_+_2938193_2938193 1.69 AT5G09440.1
EXL4
EXORDIUM like 4
arTal_v1_Chr4_-_11971203_11971203 1.69 AT4G22780.1
ACR7
ACT domain repeat 7
arTal_v1_Chr5_+_2435983_2435983 1.69 AT5G07680.2
NAC080
NAC domain containing protein 80
arTal_v1_Chr3_+_9887917_9887917 1.69 AT3G26830.1
PAD3
Cytochrome P450 superfamily protein
arTal_v1_Chr5_-_5759817_5759817 1.68 AT5G17460.3
AT5G17460.2
AT5G17460.1
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
arTal_v1_Chr4_-_11971357_11971357 1.68 AT4G22780.2
ACR7
ACT domain repeat 7
arTal_v1_Chr1_-_24001593_24001593 1.68 AT1G64610.2
AT1G64610
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr5_-_2652535_2652535 1.68 AT5G08240.1
AT5G08240
transmembrane protein
arTal_v1_Chr5_-_8186662_8186704 1.68 AT5G24160.2
AT5G24160.1
SQE6
squalene monooxygenase 6
arTal_v1_Chr2_-_15425129_15425129 1.67 AT2G36800.1
DOGT1
don-glucosyltransferase 1
arTal_v1_Chr1_-_28767712_28767712 1.66 AT1G76650.1
CML38
calmodulin-like 38
arTal_v1_Chr5_-_8547822_8547906 1.66 AT5G24870.2
AT5G24870.1
AT5G24870
RING/U-box superfamily protein
arTal_v1_Chr1_-_29914967_29914967 1.64 AT1G79520.1
AT1G79520.4
AT1G79520.3
AT1G79520
Cation efflux family protein
arTal_v1_Chr1_-_10184512_10184512 1.62 AT1G29160.1
AT1G29160
Dof-type zinc finger DNA-binding family protein
arTal_v1_Chr1_-_24002058_24002058 1.62 AT1G64610.1
AT1G64610
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr4_+_585598_585610 1.62 AT4G01430.1
AT4G01430.2
AT4G01430.3
UMAMIT29
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr5_+_20090648_20090648 1.62 AT5G49520.1
WRKY48
WRKY DNA-binding protein 48
arTal_v1_Chr5_-_23452864_23452963 1.61 AT5G57910.2
AT5G57910.1
AT5G57910
ribosomal RNA small subunit methyltransferase G
arTal_v1_Chr1_+_28296886_28296886 1.61 AT1G75400.1
AT1G75400
RING/U-box superfamily protein
arTal_v1_Chr3_+_7541384_7541384 1.60 AT3G21420.1
LBO1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr1_-_575085_575085 1.60 AT1G02660.1
AT1G02660
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr1_-_27119715_27119715 1.59 AT1G72070.2
AT1G72070
Chaperone DnaJ-domain superfamily protein
arTal_v1_Chr1_-_6101983_6101983 1.59 AT1G17744.1
AT1G17744
hypothetical protein
arTal_v1_Chr5_-_8547423_8547423 1.59 AT5G24870.3
AT5G24870
RING/U-box superfamily protein
arTal_v1_Chr4_+_15383633_15383633 1.59 AT4G31800.2
WRKY18
WRKY DNA-binding protein 18
arTal_v1_Chr5_+_2435795_2435795 1.58 AT5G07680.1
NAC080
NAC domain containing protein 80
arTal_v1_Chr1_-_28768138_28768138 1.58 AT1G76650.3
CML38
calmodulin-like 38
arTal_v1_Chr4_+_13275200_13275200 1.57 AT4G26200.1
ACS7
1-amino-cyclopropane-1-carboxylate synthase 7
arTal_v1_Chr2_+_9737583_9737583 1.57 AT2G22860.1
PSK2
phytosulfokine 2 precursor
arTal_v1_Chr3_-_7978635_7978635 1.57 AT3G22530.1
AT3G22530
heat shock protein
arTal_v1_Chr3_+_21381599_21381599 1.57 AT3G57680.3
AT3G57680
Peptidase S41 family protein
arTal_v1_Chr1_-_28993170_28993170 1.56 AT1G77150.1
AT1G77150
Pentatricopeptide repeat (PPR) superfamily protein
arTal_v1_Chr4_+_13236448_13236448 1.56 AT4G26120.1
AT4G26120
Ankyrin repeat family protein / BTB/POZ domain-containing protein
arTal_v1_Chr4_+_13236253_13236253 1.56 AT4G26120.2
AT4G26120
Ankyrin repeat family protein / BTB/POZ domain-containing protein
arTal_v1_Chr4_+_15383197_15383197 1.56 AT4G31800.3
WRKY18
WRKY DNA-binding protein 18
arTal_v1_Chr5_-_8186100_8186100 1.55 AT5G24160.3
SQE6
squalene monooxygenase 6
arTal_v1_Chr1_+_26636110_26636110 1.55 AT1G70640.1
AT1G70640
octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
arTal_v1_Chr5_-_25813620_25813648 1.55 AT5G64570.3
AT5G64570.2
AT5G64570.1
XYL4
beta-D-xylosidase 4
arTal_v1_Chr1_-_29914615_29914615 1.55 AT1G79520.2
AT1G79520
Cation efflux family protein
arTal_v1_Chr5_+_206432_206432 1.54 AT5G01520.2
AT5G01520.1
AIRP2
RING/U-box superfamily protein
arTal_v1_Chr1_-_167842_167842 1.54 AT1G01453.2
AT1G01453
late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr3_-_16984867_16984867 1.54 AT3G46230.1
HSP17.4
heat shock protein 17.4
arTal_v1_Chr5_+_19166859_19166859 1.53 AT5G47200.1
RAB1A
RAB GTPase homolog 1A
arTal_v1_Chr2_-_2259633_2259633 1.53 AT2G05910.1
AT2G05910
LURP-one-like protein (DUF567)
arTal_v1_Chr2_+_12767585_12767585 1.53 AT2G29950.1
ELF4-L1
ELF4-like 1
arTal_v1_Chr5_-_6338209_6338209 1.51 AT5G18980.1
AT5G18980.2
AT5G18980
ARM repeat superfamily protein
arTal_v1_Chr1_-_11719988_11719988 1.51 AT1G32450.1
NRT1.5
nitrate transporter 1.5
arTal_v1_Chr1_+_17798979_17798979 1.51 AT1G48210.5
AT1G48210.7
AT1G48210.4
AT1G48210.6
AT1G48210
Protein kinase superfamily protein
arTal_v1_Chr4_+_15382777_15382777 1.50 AT4G31800.1
WRKY18
WRKY DNA-binding protein 18
arTal_v1_Chr5_-_1470937_1471071 1.50 AT5G04980.4
AT5G04980.3
AT5G04980.1
AT5G04980.2
AT5G04980
DNAse I-like superfamily protein
arTal_v1_Chr1_+_29292075_29292190 1.50 AT1G77890.1
AT1G77890.4
AT1G77890.2
AT1G77890.3
AT1G77890
DNA-directed RNA polymerase II protein
arTal_v1_Chr4_-_11636720_11636720 1.49 AT4G21920.1
AT4G21920
hypothetical protein
arTal_v1_Chr3_+_3271217_3271217 1.49 AT3G10500.2
AT3G10500.1
NAC053
NAC domain containing protein 53
arTal_v1_Chr5_+_8541713_8541751 1.49 AT5G24860.3
AT5G24860.1
FPF1
flowering promoting factor 1
arTal_v1_Chr5_+_25210301_25210301 1.48 AT5G62770.1
AT5G62770
membrane-associated kinase regulator, putative (DUF1645)
arTal_v1_Chr5_+_21030943_21030943 1.48 AT5G51770.1
AT5G51770
Protein kinase superfamily protein
arTal_v1_Chr3_+_20564236_20564236 1.48 AT3G55470.1
AT3G55470
Calcium-dependent lipid-binding (CaLB domain) family protein
arTal_v1_Chr4_-_437591_437605 1.47 AT4G01010.1
AT4G01010.2
CNGC13
cyclic nucleotide-gated channel 13
arTal_v1_Chr3_-_7063372_7063372 1.47 AT3G20250.2
AT3G20250.1
PUM5
pumilio 5
arTal_v1_Chr3_+_20564081_20564081 1.46 AT3G55470.2
AT3G55470
Calcium-dependent lipid-binding (CaLB domain) family protein
arTal_v1_Chr3_-_9471039_9471039 1.45 AT3G25882.1
NIMIN-2
NIM1-interacting 2
arTal_v1_Chr5_+_15634444_15634444 1.45 AT5G39050.1
PMAT1
HXXXD-type acyl-transferase family protein
arTal_v1_Chr4_-_11694564_11694590 1.45 AT4G22070.3
AT4G22070.4
AT4G22070.1
AT4G22070.2
WRKY31
WRKY DNA-binding protein 31
arTal_v1_Chr3_+_16383595_16383595 1.45 AT3G44880.1
ACD1
Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein
arTal_v1_Chr2_-_16359943_16359943 1.44 AT2G39200.1
MLO12
Seven transmembrane MLO family protein
arTal_v1_Chr1_-_29982819_29982819 1.44 AT1G79680.1
WAKL10
WALL ASSOCIATED KINASE (WAK)-LIKE 10
arTal_v1_Chr5_+_26864846_26864846 1.44 AT5G67340.2
AT5G67340
ARM repeat superfamily protein
arTal_v1_Chr4_+_9112686_9112686 1.44 AT4G16110.1
RR2
response regulator 2
arTal_v1_Chr4_-_13304440_13304440 1.43 AT4G26270.1
PFK3
phosphofructokinase 3
arTal_v1_Chr1_+_25865471_25865471 1.43 AT1G68820.1
AT1G68820.3
AT1G68820.2
AT1G68820
Transmembrane Fragile-X-F-associated protein
arTal_v1_Chr5_-_5356353_5356353 1.43 AT5G16360.1
AT5G16360
NC domain-containing protein-like protein
arTal_v1_Chr3_+_20736508_20736512 1.43 AT3G55880.1
AT3G55880.3
AT3G55880.2
AT3G55880.4
SUE4
Alpha/beta hydrolase related protein
arTal_v1_Chr1_+_3945584_3945584 1.42 AT1G11700.1
AT1G11700
senescence regulator (Protein of unknown function, DUF584)
arTal_v1_Chr4_+_1306313_1306313 1.42 AT4G02940.1
AT4G02940
oxidoreductase, 2OG-Fe(II) oxygenase family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G47500

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.7 8.3 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
1.1 6.4 GO:0009413 response to flooding(GO:0009413)
1.0 3.9 GO:0010351 lithium ion transport(GO:0010351)
0.9 2.7 GO:0071242 cellular response to ammonium ion(GO:0071242)
0.8 3.3 GO:0015697 quaternary ammonium group transport(GO:0015697)
0.8 4.0 GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport(GO:1902418)
0.8 3.1 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.8 3.9 GO:0043620 regulation of DNA-templated transcription in response to stress(GO:0043620)
0.7 6.7 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.7 9.4 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.7 2.2 GO:0015802 basic amino acid transport(GO:0015802)
0.7 2.1 GO:0002215 defense response to nematode(GO:0002215)
0.7 2.7 GO:0033306 phytol metabolic process(GO:0033306)
0.6 2.5 GO:0030643 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.6 5.6 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.6 1.8 GO:0006658 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.6 2.2 GO:0016099 monoterpenoid metabolic process(GO:0016098) monoterpenoid biosynthetic process(GO:0016099)
0.6 5.0 GO:0050691 regulation of defense response to virus by host(GO:0050691)
0.5 2.2 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.5 2.0 GO:0046514 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.5 1.9 GO:0010042 response to manganese ion(GO:0010042)
0.5 1.4 GO:0090213 regulation of radial pattern formation(GO:0090213)
0.5 1.4 GO:0010124 phenylacetate catabolic process(GO:0010124)
0.5 0.5 GO:0040030 regulation of molecular function, epigenetic(GO:0040030) negative regulation of molecular function, epigenetic(GO:0045857)
0.4 0.4 GO:0075733 intracellular transport of virus(GO:0075733)
0.4 0.4 GO:0019322 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.4 1.8 GO:1900409 positive regulation of cellular response to oxidative stress(GO:1900409)
0.4 1.3 GO:0009945 radial axis specification(GO:0009945)
0.4 1.3 GO:1902347 response to strigolactone(GO:1902347)
0.4 2.2 GO:0070125 mitochondrial translational elongation(GO:0070125)
0.4 2.5 GO:0070542 response to fatty acid(GO:0070542) cellular response to fatty acid(GO:0071398)
0.4 1.7 GO:0070509 calcium ion import(GO:0070509)
0.4 2.8 GO:0010325 raffinose family oligosaccharide biosynthetic process(GO:0010325)
0.4 1.2 GO:0010792 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
0.4 1.6 GO:0051090 regulation of sequence-specific DNA binding transcription factor activity(GO:0051090)
0.4 1.2 GO:0030970 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.4 2.7 GO:0009745 sucrose mediated signaling(GO:0009745)
0.4 2.7 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.4 2.3 GO:0042981 apoptotic process(GO:0006915) regulation of apoptotic process(GO:0042981) negative regulation of apoptotic process(GO:0043066)
0.4 1.5 GO:0009270 response to humidity(GO:0009270)
0.4 4.3 GO:0045226 UDP-L-arabinose biosynthetic process(GO:0033358) extracellular polysaccharide biosynthetic process(GO:0045226) capsule polysaccharide biosynthetic process(GO:0045227) capsule organization(GO:0045230) extracellular polysaccharide metabolic process(GO:0046379)
0.3 1.7 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.3 2.7 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
0.3 1.0 GO:0051938 L-amino acid import(GO:0043092) L-glutamate import(GO:0051938)
0.3 1.0 GO:0045900 negative regulation of translational elongation(GO:0045900)
0.3 2.9 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603)
0.3 1.6 GO:0030242 pexophagy(GO:0030242)
0.3 2.8 GO:0009819 drought recovery(GO:0009819)
0.3 2.6 GO:0009410 response to xenobiotic stimulus(GO:0009410)
0.3 1.2 GO:0006182 cGMP biosynthetic process(GO:0006182) cGMP metabolic process(GO:0046068)
0.3 3.7 GO:0042374 phylloquinone biosynthetic process(GO:0042372) phylloquinone metabolic process(GO:0042374)
0.3 1.1 GO:0006569 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.3 0.6 GO:0035865 cellular response to potassium ion(GO:0035865)
0.3 1.4 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.3 0.5 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.3 2.2 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.3 3.5 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.3 1.4 GO:0060151 peroxisome localization(GO:0060151)
0.3 1.9 GO:0019632 shikimate metabolic process(GO:0019632)
0.3 3.5 GO:0010039 response to iron ion(GO:0010039)
0.3 1.6 GO:0015969 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.3 0.8 GO:0046521 sphingoid catabolic process(GO:0046521)
0.3 3.6 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.3 1.3 GO:0010148 transpiration(GO:0010148)
0.3 1.0 GO:0080168 abscisic acid transport(GO:0080168)
0.3 0.8 GO:0002697 regulation of immune effector process(GO:0002697) regulation of defense response to virus(GO:0050688)
0.3 0.8 GO:0010353 response to trehalose(GO:0010353)
0.2 2.2 GO:0051262 protein tetramerization(GO:0051262)
0.2 0.7 GO:0048832 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.2 1.5 GO:0043407 negative regulation of MAP kinase activity(GO:0043407) negative regulation of MAPK cascade(GO:0043409)
0.2 1.2 GO:0006517 protein deglycosylation(GO:0006517)
0.2 0.7 GO:0071569 protein ufmylation(GO:0071569)
0.2 0.9 GO:0009660 amyloplast organization(GO:0009660)
0.2 0.7 GO:0071763 nuclear membrane organization(GO:0071763)
0.2 0.5 GO:0006348 chromatin silencing at telomere(GO:0006348)
0.2 0.7 GO:0016241 regulation of macroautophagy(GO:0016241) regulation of autophagosome assembly(GO:2000785)
0.2 2.0 GO:0046337 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.2 1.1 GO:0006571 tyrosine biosynthetic process(GO:0006571)
0.2 3.8 GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
0.2 1.3 GO:0070550 establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
0.2 0.6 GO:1902464 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.2 0.6 GO:0010372 positive regulation of gibberellin biosynthetic process(GO:0010372)
0.2 0.6 GO:0071494 cellular response to UV-C(GO:0071494)
0.2 2.6 GO:0042128 nitrate metabolic process(GO:0042126) nitrate assimilation(GO:0042128)
0.2 0.6 GO:0010246 rhamnogalacturonan I biosynthetic process(GO:0010246)
0.2 1.0 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.2 1.6 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.2 3.9 GO:0006826 iron ion transport(GO:0006826)
0.2 3.3 GO:0002183 cytoplasmic translational initiation(GO:0002183)
0.2 3.3 GO:0023014 signal transduction by protein phosphorylation(GO:0023014)
0.2 2.3 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.2 1.1 GO:0048530 fruit morphogenesis(GO:0048530)
0.2 2.1 GO:0002221 pattern recognition receptor signaling pathway(GO:0002221)
0.2 1.1 GO:0046461 diacylglycerol metabolic process(GO:0046339) neutral lipid catabolic process(GO:0046461) acylglycerol catabolic process(GO:0046464)
0.2 0.6 GO:0052746 inositol phosphorylation(GO:0052746)
0.2 0.6 GO:0043171 peptide catabolic process(GO:0043171)
0.2 1.3 GO:0060149 negative regulation of posttranscriptional gene silencing(GO:0060149)
0.2 1.7 GO:0018107 peptidyl-threonine phosphorylation(GO:0018107) peptidyl-threonine modification(GO:0018210)
0.2 0.6 GO:1900111 positive regulation of histone H3-K9 dimethylation(GO:1900111)
0.2 1.5 GO:0070301 cellular response to hydrogen peroxide(GO:0070301)
0.2 0.6 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.2 0.7 GO:0006768 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102) beta-alanine metabolic process(GO:0019482)
0.2 7.7 GO:0006749 glutathione metabolic process(GO:0006749)
0.2 0.9 GO:0051601 exocyst localization(GO:0051601)
0.2 1.6 GO:0070370 cellular heat acclimation(GO:0070370)
0.2 1.8 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.2 0.9 GO:0008333 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
0.2 1.1 GO:0015846 polyamine transport(GO:0015846)
0.2 0.5 GO:0030002 cellular anion homeostasis(GO:0030002)
0.2 1.2 GO:0090057 root radial pattern formation(GO:0090057)
0.2 1.0 GO:0006283 transcription-coupled nucleotide-excision repair(GO:0006283)
0.2 0.5 GO:0017196 N-terminal protein amino acid acetylation(GO:0006474) N-terminal peptidyl-methionine acetylation(GO:0017196)
0.2 3.2 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.2 0.5 GO:1901562 response to paraquat(GO:1901562)
0.2 1.0 GO:0000082 G1/S transition of mitotic cell cycle(GO:0000082)
0.2 0.7 GO:1901334 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.2 0.5 GO:0000050 urea cycle(GO:0000050)
0.2 2.3 GO:0010555 response to mannitol(GO:0010555)
0.2 0.5 GO:0043181 vacuolar sequestering(GO:0043181)
0.2 1.7 GO:0071901 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of protein serine/threonine kinase activity(GO:0071901) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.2 0.5 GO:0010447 response to acidic pH(GO:0010447)
0.2 0.7 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.2 0.7 GO:0070898 RNA polymerase III transcriptional preinitiation complex assembly(GO:0070898)
0.2 0.7 GO:0071836 nectar secretion(GO:0071836)
0.2 1.1 GO:0046482 para-aminobenzoic acid metabolic process(GO:0046482)
0.2 1.0 GO:0043617 cellular response to sucrose starvation(GO:0043617)
0.2 0.8 GO:0032950 regulation of beta-glucan metabolic process(GO:0032950) regulation of beta-glucan biosynthetic process(GO:0032951) regulation of cellulose biosynthetic process(GO:2001006)
0.2 0.9 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.2 2.0 GO:0015996 chlorophyll catabolic process(GO:0015996)
0.2 3.3 GO:0010167 response to nitrate(GO:0010167)
0.2 0.3 GO:0033673 negative regulation of protein kinase activity(GO:0006469) negative regulation of kinase activity(GO:0033673)
0.2 1.6 GO:0006450 regulation of translational fidelity(GO:0006450)
0.2 0.8 GO:0006624 vacuolar protein processing(GO:0006624)
0.2 0.5 GO:0090239 regulation of histone H4 acetylation(GO:0090239)
0.2 1.7 GO:0055062 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.2 0.5 GO:0010618 aerenchyma formation(GO:0010618)
0.2 0.9 GO:0006000 fructose metabolic process(GO:0006000)
0.2 15.4 GO:0010150 leaf senescence(GO:0010150)
0.2 0.3 GO:0015744 succinate transport(GO:0015744)
0.2 1.5 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.2 0.2 GO:0080001 mucilage extrusion from seed coat(GO:0080001)
0.2 0.6 GO:0051031 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.1 2.5 GO:0048441 petal development(GO:0048441) corolla development(GO:0048465)
0.1 0.6 GO:0034063 stress granule assembly(GO:0034063)
0.1 2.8 GO:0006012 galactose metabolic process(GO:0006012)
0.1 0.4 GO:0010220 positive regulation of vernalization response(GO:0010220)
0.1 0.6 GO:0002119 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.1 0.4 GO:0015783 GDP-fucose transport(GO:0015783) UDP-glucose transport(GO:0015786)
0.1 0.6 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.1 1.5 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.1 0.3 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.1 1.7 GO:0048317 seed morphogenesis(GO:0048317)
0.1 0.8 GO:0043102 L-methionine biosynthetic process from methylthioadenosine(GO:0019509) amino acid salvage(GO:0043102) L-methionine salvage(GO:0071267)
0.1 1.7 GO:0015749 monosaccharide transport(GO:0015749)
0.1 0.8 GO:1990118 sodium ion transmembrane transport(GO:0035725) sodium ion import(GO:0097369) sodium ion import across plasma membrane(GO:0098719) sodium ion import into cell(GO:1990118)
0.1 0.7 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.1 0.7 GO:0080009 mRNA methylation(GO:0080009)
0.1 0.7 GO:1901006 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.1 1.7 GO:0080086 stamen filament development(GO:0080086)
0.1 0.5 GO:0015700 arsenite transport(GO:0015700)
0.1 0.4 GO:0010288 response to lead ion(GO:0010288)
0.1 0.8 GO:0034059 response to anoxia(GO:0034059)
0.1 0.4 GO:0006420 arginyl-tRNA aminoacylation(GO:0006420)
0.1 1.3 GO:0010951 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.1 0.4 GO:0042787 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.1 0.5 GO:0051455 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation(GO:0051316) attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation(GO:0051455) microtubule cytoskeleton organization involved in homologous chromosome segregation(GO:0090172)
0.1 27.2 GO:0071456 cellular response to decreased oxygen levels(GO:0036294) cellular response to oxygen levels(GO:0071453) cellular response to hypoxia(GO:0071456)
0.1 0.4 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.1 1.0 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.1 0.8 GO:0006379 mRNA cleavage(GO:0006379)
0.1 0.6 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.1 0.6 GO:0070863 regulation of protein exit from endoplasmic reticulum(GO:0070861) positive regulation of protein exit from endoplasmic reticulum(GO:0070863)
0.1 0.6 GO:1900426 positive regulation of defense response to bacterium(GO:1900426)
0.1 0.4 GO:0051512 positive regulation of unidimensional cell growth(GO:0051512)
0.1 1.0 GO:0000304 response to singlet oxygen(GO:0000304)
0.1 0.2 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.1 1.4 GO:0031053 primary miRNA processing(GO:0031053)
0.1 0.2 GO:0017145 stem cell division(GO:0017145)
0.1 1.1 GO:0072348 sulfur compound transport(GO:0072348)
0.1 2.0 GO:0015770 sucrose transport(GO:0015770)
0.1 1.2 GO:0006621 protein retention in ER lumen(GO:0006621)
0.1 0.3 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.1 0.8 GO:0009942 longitudinal axis specification(GO:0009942)
0.1 2.6 GO:0002239 response to oomycetes(GO:0002239)
0.1 0.4 GO:0099636 cytoplasmic streaming(GO:0099636)
0.1 3.2 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.1 4.4 GO:0048235 pollen sperm cell differentiation(GO:0048235)
0.1 0.4 GO:0006023 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203) UDP-glucuronate metabolic process(GO:0046398)
0.1 0.3 GO:0018027 peptidyl-lysine dimethylation(GO:0018027)
0.1 2.7 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.1 0.3 GO:0000491 small nucleolar ribonucleoprotein complex assembly(GO:0000491)
0.1 0.8 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.1 0.8 GO:0097437 maintenance of seed dormancy(GO:0010231) maintenance of dormancy(GO:0097437)
0.1 7.9 GO:0019722 calcium-mediated signaling(GO:0019722)
0.1 0.9 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.1 0.3 GO:0010203 response to very low fluence red light stimulus(GO:0010203)
0.1 3.6 GO:0045047 protein targeting to ER(GO:0045047) establishment of protein localization to endoplasmic reticulum(GO:0072599)
0.1 0.3 GO:0007019 microtubule depolymerization(GO:0007019)
0.1 3.9 GO:0034620 cellular response to unfolded protein(GO:0034620)
0.1 0.8 GO:0031222 arabinan catabolic process(GO:0031222)
0.1 0.3 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.1 0.3 GO:0032025 response to cobalt ion(GO:0032025)
0.1 3.7 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.1 0.8 GO:0032958 inositol phosphate biosynthetic process(GO:0032958)
0.1 0.5 GO:1990414 replication-born double-strand break repair via sister chromatid exchange(GO:1990414)
0.1 0.8 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.1 0.3 GO:0010507 negative regulation of autophagy(GO:0010507)
0.1 4.6 GO:0009631 cold acclimation(GO:0009631)
0.1 0.8 GO:0046822 regulation of nucleocytoplasmic transport(GO:0046822)
0.1 0.3 GO:0006448 regulation of translational elongation(GO:0006448)
0.1 2.8 GO:0010286 heat acclimation(GO:0010286)
0.1 0.7 GO:0046520 sphingoid biosynthetic process(GO:0046520)
0.1 0.5 GO:1900458 negative regulation of brassinosteroid mediated signaling pathway(GO:1900458)
0.1 0.3 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.1 0.9 GO:0050879 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.1 0.4 GO:0006741 NADP biosynthetic process(GO:0006741)
0.1 1.2 GO:0010262 somatic embryogenesis(GO:0010262)
0.1 0.4 GO:0001120 DNA-templated transcriptional open complex formation(GO:0001112) transcriptional open complex formation at RNA polymerase II promoter(GO:0001113) protein-DNA complex remodeling(GO:0001120) macromolecular complex remodeling(GO:0034367)
0.1 0.6 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.1 0.9 GO:0007584 response to nutrient(GO:0007584)
0.1 0.7 GO:0045116 protein neddylation(GO:0045116)
0.1 0.2 GO:1901976 regulation of cell cycle checkpoint(GO:1901976)
0.1 0.8 GO:1902025 nitrate import(GO:1902025)
0.1 0.4 GO:1990069 stomatal opening(GO:1990069)
0.1 0.8 GO:0071051 polyadenylation-dependent snoRNA 3'-end processing(GO:0071051)
0.1 1.2 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.1 0.6 GO:0009610 response to symbiotic fungus(GO:0009610)
0.1 0.5 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.1 0.2 GO:0032979 protein insertion into membrane from inner side(GO:0032978) protein insertion into mitochondrial membrane from inner side(GO:0032979) protein insertion into mitochondrial membrane(GO:0051204)
0.1 1.7 GO:0043666 regulation of phosphoprotein phosphatase activity(GO:0043666)
0.1 0.4 GO:1900036 positive regulation of cellular response to heat(GO:1900036)
0.1 0.3 GO:0048200 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.1 3.2 GO:0006099 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.1 0.5 GO:0045851 pH reduction(GO:0045851)
0.1 0.6 GO:0042176 regulation of protein catabolic process(GO:0042176)
0.1 1.5 GO:0009695 jasmonic acid biosynthetic process(GO:0009695)
0.1 0.3 GO:0002184 cytoplasmic translational termination(GO:0002184)
0.1 0.5 GO:0090356 negative regulation of auxin metabolic process(GO:0090356)
0.1 1.3 GO:0055070 copper ion homeostasis(GO:0055070)
0.1 0.5 GO:0040020 regulation of meiotic nuclear division(GO:0040020)
0.1 1.6 GO:0042542 response to hydrogen peroxide(GO:0042542)
0.1 6.5 GO:0000209 protein polyubiquitination(GO:0000209)
0.1 4.3 GO:0009624 response to nematode(GO:0009624)
0.1 0.4 GO:0030308 negative regulation of cell growth(GO:0030308)
0.1 0.4 GO:0010387 COP9 signalosome assembly(GO:0010387)
0.1 1.5 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.1 3.0 GO:0006813 potassium ion transport(GO:0006813)
0.1 0.1 GO:0019401 alditol biosynthetic process(GO:0019401)
0.1 0.5 GO:0071244 cellular response to carbon dioxide(GO:0071244)
0.1 0.7 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.1 0.2 GO:0051703 pollen tube reception(GO:0010483) intraspecies interaction between organisms(GO:0051703)
0.1 0.8 GO:0006890 retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.1 0.7 GO:0036065 fucosylation(GO:0036065)
0.1 0.5 GO:0010047 fruit dehiscence(GO:0010047)
0.1 0.6 GO:0031365 N-terminal protein amino acid modification(GO:0031365)
0.1 1.8 GO:0033108 mitochondrial respiratory chain complex assembly(GO:0033108)
0.1 1.2 GO:1900865 chloroplast RNA modification(GO:1900865)
0.1 1.3 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.1 0.3 GO:0097298 regulation of nucleus size(GO:0097298)
0.1 5.4 GO:0070646 protein modification by small protein removal(GO:0070646)
0.1 0.1 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.1 2.2 GO:0016482 cytosolic transport(GO:0016482)
0.1 0.5 GO:0016119 carotene metabolic process(GO:0016119)
0.1 0.3 GO:0002683 negative regulation of immune system process(GO:0002683)
0.1 2.3 GO:0009626 plant-type hypersensitive response(GO:0009626)
0.1 0.2 GO:0000719 photoreactive repair(GO:0000719)
0.1 0.6 GO:0006312 mitotic recombination(GO:0006312)
0.1 1.4 GO:0009789 positive regulation of abscisic acid-activated signaling pathway(GO:0009789)
0.1 0.7 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.1 0.3 GO:0006307 DNA dealkylation involved in DNA repair(GO:0006307)
0.1 0.5 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.1 0.5 GO:0034614 cellular response to reactive oxygen species(GO:0034614)
0.1 0.4 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.1 4.8 GO:0018209 peptidyl-serine phosphorylation(GO:0018105) peptidyl-serine modification(GO:0018209)
0.1 1.4 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.1 0.3 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.1 1.3 GO:0071472 cellular response to salt stress(GO:0071472)
0.1 0.9 GO:0008356 asymmetric cell division(GO:0008356)
0.1 1.0 GO:0043649 dicarboxylic acid catabolic process(GO:0043649)
0.1 0.6 GO:0015833 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.1 1.4 GO:0002237 response to molecule of bacterial origin(GO:0002237)
0.1 0.7 GO:0045732 positive regulation of protein catabolic process(GO:0045732)
0.1 0.2 GO:0051196 regulation of coenzyme metabolic process(GO:0051196)
0.1 0.6 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.1 1.0 GO:0031163 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.1 0.8 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.0 0.0 GO:0071731 response to nitric oxide(GO:0071731)
0.0 0.7 GO:0010821 regulation of mitochondrion organization(GO:0010821)
0.0 0.4 GO:0033683 nucleotide-excision repair, DNA incision(GO:0033683)
0.0 0.9 GO:0061572 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.0 0.4 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.0 0.8 GO:0036293 response to decreased oxygen levels(GO:0036293)
0.0 0.8 GO:0000460 maturation of 5.8S rRNA(GO:0000460)
0.0 0.7 GO:0019511 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.5 GO:1990937 xylan acetylation(GO:1990937)
0.0 0.4 GO:0006446 regulation of translational initiation(GO:0006446)
0.0 1.8 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.7 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.2 GO:0033962 cytoplasmic mRNA processing body assembly(GO:0033962)
0.0 0.9 GO:0006367 transcription initiation from RNA polymerase II promoter(GO:0006367)
0.0 0.4 GO:0080028 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.0 0.8 GO:0009693 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.0 0.7 GO:0006995 cellular response to nitrogen starvation(GO:0006995)
0.0 0.4 GO:0042773 ATP synthesis coupled electron transport(GO:0042773)
0.0 0.4 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.6 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.0 1.5 GO:0016573 internal protein amino acid acetylation(GO:0006475) histone acetylation(GO:0016573) internal peptidyl-lysine acetylation(GO:0018393) peptidyl-lysine acetylation(GO:0018394)
0.0 1.5 GO:0036503 ER-associated ubiquitin-dependent protein catabolic process(GO:0030433) ERAD pathway(GO:0036503)
0.0 0.4 GO:0006914 autophagy(GO:0006914)
0.0 0.2 GO:0009557 antipodal cell differentiation(GO:0009557)
0.0 8.5 GO:0016311 dephosphorylation(GO:0016311)
0.0 0.4 GO:0030162 regulation of proteolysis(GO:0030162)
0.0 0.3 GO:0006415 translational termination(GO:0006415)
0.0 2.6 GO:0009561 megagametogenesis(GO:0009561)
0.0 0.5 GO:0015693 magnesium ion transport(GO:0015693)
0.0 0.5 GO:0008216 spermidine metabolic process(GO:0008216)
0.0 1.1 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 1.1 GO:0007033 vacuole organization(GO:0007033)
0.0 1.6 GO:0030490 maturation of SSU-rRNA(GO:0030490)
0.0 0.7 GO:0055046 microgametogenesis(GO:0055046)
0.0 0.1 GO:0010731 protein glutathionylation(GO:0010731)
0.0 0.2 GO:0006723 cuticle hydrocarbon biosynthetic process(GO:0006723)
0.0 0.3 GO:0070919 production of siRNA involved in chromatin silencing by small RNA(GO:0070919)
0.0 0.9 GO:0010252 auxin homeostasis(GO:0010252)
0.0 0.5 GO:0061157 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 0.7 GO:0000373 Group II intron splicing(GO:0000373)
0.0 0.3 GO:0048359 mucilage metabolic process involved in seed coat development(GO:0048359)
0.0 1.0 GO:0034599 cellular response to oxidative stress(GO:0034599)
0.0 0.3 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.0 9.9 GO:0006508 proteolysis(GO:0006508)
0.0 0.7 GO:0006401 RNA catabolic process(GO:0006401)
0.0 0.1 GO:0071963 establishment or maintenance of cell polarity regulating cell shape(GO:0071963) regulation of establishment or maintenance of cell polarity regulating cell shape(GO:2000769)
0.0 0.2 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.0 0.2 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.0 0.6 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.2 GO:2000779 regulation of double-strand break repair(GO:2000779)
0.0 1.1 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.0 0.2 GO:0010018 far-red light signaling pathway(GO:0010018)
0.0 0.4 GO:0006282 regulation of DNA repair(GO:0006282)
0.0 1.4 GO:0000381 regulation of alternative mRNA splicing, via spliceosome(GO:0000381)
0.0 0.9 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.3 GO:0015780 nucleotide-sugar transport(GO:0015780)
0.0 0.4 GO:0006997 nucleus organization(GO:0006997)
0.0 0.4 GO:0097354 protein prenylation(GO:0018342) prenylation(GO:0097354)
0.0 1.0 GO:0009749 response to glucose(GO:0009749)
0.0 0.6 GO:0009816 defense response to bacterium, incompatible interaction(GO:0009816)
0.0 0.2 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.0 0.3 GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic(GO:0090502)
0.0 0.4 GO:0010093 specification of floral organ identity(GO:0010093)
0.0 0.4 GO:0010048 vernalization response(GO:0010048)
0.0 0.9 GO:0042752 regulation of circadian rhythm(GO:0042752)
0.0 0.9 GO:0006413 translational initiation(GO:0006413)
0.0 0.4 GO:0051026 chiasma assembly(GO:0051026)
0.0 0.2 GO:0006152 purine nucleoside catabolic process(GO:0006152) pyrimidine ribonucleoside catabolic process(GO:0046133) pyrimidine nucleoside catabolic process(GO:0046135)
0.0 3.0 GO:0046777 protein autophosphorylation(GO:0046777)
0.0 0.2 GO:0010396 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.0 0.1 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.0 7.2 GO:0016192 vesicle-mediated transport(GO:0016192)
0.0 11.5 GO:0016567 protein ubiquitination(GO:0016567)
0.0 0.3 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 0.2 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.0 0.2 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122)
0.0 0.2 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.0 0.1 GO:0031023 microtubule organizing center organization(GO:0031023)
0.0 0.9 GO:0031123 RNA 3'-end processing(GO:0031123)
0.0 0.7 GO:0009910 negative regulation of flower development(GO:0009910)
0.0 0.1 GO:0046146 tetrahydrobiopterin biosynthetic process(GO:0006729) tetrahydrobiopterin metabolic process(GO:0046146)
0.0 0.3 GO:0006368 transcription elongation from RNA polymerase II promoter(GO:0006368)
0.0 0.1 GO:0034308 primary alcohol metabolic process(GO:0034308)
0.0 0.1 GO:0009095 L-phenylalanine biosynthetic process(GO:0009094) aromatic amino acid family biosynthetic process, prephenate pathway(GO:0009095) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.0 0.6 GO:0006783 heme biosynthetic process(GO:0006783)
0.0 0.3 GO:0015743 malate transport(GO:0015743)
0.0 0.5 GO:0002097 tRNA wobble base modification(GO:0002097)
0.0 0.3 GO:0090305 nucleic acid phosphodiester bond hydrolysis(GO:0090305)
0.0 1.0 GO:0016036 cellular response to phosphate starvation(GO:0016036)
0.0 0.2 GO:0010078 maintenance of root meristem identity(GO:0010078)
0.0 0.6 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.2 GO:0000018 regulation of DNA recombination(GO:0000018) negative regulation of DNA recombination(GO:0045910)
0.0 0.2 GO:0051567 histone H3-K9 methylation(GO:0051567) histone H3-K9 modification(GO:0061647)
0.0 0.1 GO:0033259 plastid DNA metabolic process(GO:0033258) plastid DNA replication(GO:0033259)
0.0 0.2 GO:0009785 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.0 0.2 GO:0010037 response to carbon dioxide(GO:0010037)
0.0 0.9 GO:0009809 lignin biosynthetic process(GO:0009809)
0.0 1.8 GO:0000398 mRNA splicing, via spliceosome(GO:0000398)
0.0 0.1 GO:0072530 purine-containing compound transmembrane transport(GO:0072530)
0.0 1.1 GO:1902600 hydrogen ion transmembrane transport(GO:1902600)
0.0 0.3 GO:0006574 valine catabolic process(GO:0006574)
0.0 0.1 GO:0019419 sulfate reduction(GO:0019419)
0.0 0.5 GO:0016575 histone deacetylation(GO:0016575)
0.0 0.1 GO:0009206 purine nucleoside triphosphate biosynthetic process(GO:0009145) purine ribonucleoside triphosphate biosynthetic process(GO:0009206)
0.0 0.1 GO:0009088 threonine biosynthetic process(GO:0009088)
0.0 0.1 GO:0042360 fat-soluble vitamin metabolic process(GO:0006775) vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360) fat-soluble vitamin biosynthetic process(GO:0042362)
0.0 0.5 GO:0072329 monocarboxylic acid catabolic process(GO:0072329)
0.0 1.4 GO:0006812 cation transport(GO:0006812)
0.0 0.0 GO:0043484 regulation of RNA splicing(GO:0043484)
0.0 0.1 GO:0006491 N-glycan processing(GO:0006491)
0.0 0.8 GO:0010200 response to chitin(GO:0010200)
0.0 0.3 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.3 GO:0005785 signal recognition particle receptor complex(GO:0005785)
0.6 2.3 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.6 1.7 GO:0034702 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
0.5 1.5 GO:0045334 clathrin-coated endocytic vesicle(GO:0045334)
0.4 1.6 GO:0034272 phosphatidylinositol 3-kinase complex(GO:0005942) phosphatidylinositol 3-kinase complex, class III, type I(GO:0034271) phosphatidylinositol 3-kinase complex, class III, type II(GO:0034272) phosphatidylinositol 3-kinase complex, class III(GO:0035032)
0.3 5.1 GO:0005801 cis-Golgi network(GO:0005801)
0.3 1.3 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.3 2.7 GO:0017119 Golgi transport complex(GO:0017119)
0.3 7.0 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.3 1.4 GO:0034657 GID complex(GO:0034657)
0.2 1.7 GO:0031372 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.2 0.7 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.2 0.6 GO:0030897 HOPS complex(GO:0030897)
0.2 0.4 GO:0005685 U1 snRNP(GO:0005685)
0.2 0.6 GO:0005712 chiasma(GO:0005712)
0.2 1.2 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.2 0.9 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.2 0.5 GO:0031417 N-terminal protein acetyltransferase complex(GO:0031414) NatC complex(GO:0031417)
0.2 1.5 GO:0030131 clathrin adaptor complex(GO:0030131)
0.2 0.7 GO:0000126 transcription factor TFIIIB complex(GO:0000126)
0.2 1.0 GO:0055038 recycling endosome membrane(GO:0055038)
0.2 0.5 GO:0030427 site of polarized growth(GO:0030427)
0.2 2.9 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.1 1.5 GO:0030904 retromer complex(GO:0030904)
0.1 1.3 GO:0010445 nuclear dicing body(GO:0010445)
0.1 3.0 GO:0031012 extracellular matrix(GO:0031012)
0.1 2.3 GO:0005771 multivesicular body(GO:0005771)
0.1 0.7 GO:0043036 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.1 0.5 GO:0031932 TORC2 complex(GO:0031932)
0.1 4.2 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.1 7.6 GO:0016607 nuclear speck(GO:0016607)
0.1 2.0 GO:0031965 nuclear membrane(GO:0031965)
0.1 1.5 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.1 1.2 GO:0035861 site of double-strand break(GO:0035861)
0.1 0.9 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.1 1.3 GO:1902562 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.1 1.4 GO:0005786 signal recognition particle, endoplasmic reticulum targeting(GO:0005786)
0.1 1.7 GO:0005769 early endosome(GO:0005769)
0.1 0.8 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.1 1.6 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.1 0.4 GO:0030681 nucleolar ribonuclease P complex(GO:0005655) multimeric ribonuclease P complex(GO:0030681)
0.1 4.3 GO:0009504 cell plate(GO:0009504)
0.1 0.6 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.1 0.8 GO:0000813 ESCRT I complex(GO:0000813)
0.1 1.3 GO:0000109 nucleotide-excision repair complex(GO:0000109)
0.1 1.0 GO:0030014 CCR4-NOT complex(GO:0030014)
0.1 0.8 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.1 1.8 GO:0005798 Golgi-associated vesicle(GO:0005798)
0.1 0.6 GO:0005677 chromatin silencing complex(GO:0005677)
0.1 1.0 GO:0008278 cohesin complex(GO:0008278)
0.1 0.4 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.1 0.7 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.1 13.8 GO:0000325 plant-type vacuole(GO:0000325)
0.1 0.3 GO:0005652 nuclear lamina(GO:0005652)
0.1 1.1 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.1 3.7 GO:0016592 mediator complex(GO:0016592)
0.1 0.3 GO:0005853 eukaryotic translation elongation factor 1 complex(GO:0005853)
0.1 0.6 GO:0030127 COPII vesicle coat(GO:0030127)
0.1 0.7 GO:0071256 translocon complex(GO:0071256)
0.1 0.7 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 0.5 GO:0000791 euchromatin(GO:0000791)
0.1 0.5 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.1 0.7 GO:0016272 prefoldin complex(GO:0016272)
0.1 0.3 GO:0018444 translation release factor complex(GO:0018444)
0.1 0.6 GO:1990726 Lsm1-7-Pat1 complex(GO:1990726)
0.1 0.3 GO:0000243 commitment complex(GO:0000243)
0.1 1.6 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.1 0.6 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.1 0.3 GO:0032044 DSIF complex(GO:0032044)
0.1 0.4 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.1 0.2 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.1 1.7 GO:0016604 nuclear body(GO:0016604)
0.1 1.7 GO:1903293 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.1 0.2 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.1 0.7 GO:0045257 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)(GO:0005749) succinate dehydrogenase complex (ubiquinone)(GO:0045257) fumarate reductase complex(GO:0045283)
0.1 0.8 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.1 3.9 GO:0090406 pollen tube(GO:0090406)
0.1 0.4 GO:0015934 large ribosomal subunit(GO:0015934)
0.1 0.6 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.1 0.3 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 0.8 GO:0030134 ER to Golgi transport vesicle(GO:0030134)
0.1 1.1 GO:0035097 histone methyltransferase complex(GO:0035097)
0.1 2.2 GO:0010287 plastoglobule(GO:0010287)
0.1 0.2 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.1 0.6 GO:0019774 proteasome core complex, beta-subunit complex(GO:0019774)
0.0 0.7 GO:0034399 nuclear periphery(GO:0034399)
0.0 0.5 GO:0030125 clathrin vesicle coat(GO:0030125)
0.0 0.3 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.0 0.2 GO:0033185 mannosyltransferase complex(GO:0031501) dolichol-phosphate-mannose synthase complex(GO:0033185)
0.0 0.1 GO:1990298 bub1-bub3 complex(GO:1990298)
0.0 2.0 GO:0000139 Golgi membrane(GO:0000139)
0.0 0.4 GO:0000439 core TFIIH complex(GO:0000439)
0.0 0.5 GO:0072546 ER membrane protein complex(GO:0072546)
0.0 2.6 GO:0009524 phragmoplast(GO:0009524)
0.0 19.9 GO:0005774 vacuolar membrane(GO:0005774)
0.0 0.6 GO:0008541 proteasome regulatory particle, lid subcomplex(GO:0008541)
0.0 0.2 GO:0005787 signal peptidase complex(GO:0005787)
0.0 1.0 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)
0.0 0.7 GO:0022624 proteasome regulatory particle(GO:0005838) proteasome accessory complex(GO:0022624)
0.0 1.7 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 1.3 GO:0032040 small-subunit processome(GO:0032040)
0.0 0.4 GO:0008180 COP9 signalosome(GO:0008180)
0.0 0.6 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 1.3 GO:0016591 DNA-directed RNA polymerase II, holoenzyme(GO:0016591)
0.0 4.2 GO:0005681 spliceosomal complex(GO:0005681)
0.0 0.3 GO:0005732 small nucleolar ribonucleoprotein complex(GO:0005732)
0.0 0.3 GO:0005844 polysome(GO:0005844)
0.0 0.3 GO:0000427 plastid-encoded plastid RNA polymerase complex(GO:0000427)
0.0 0.7 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 0.3 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.0 0.6 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.0 0.6 GO:0031306 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.6 GO:0000794 condensed nuclear chromosome(GO:0000794)
0.0 0.2 GO:0005758 mitochondrial intermembrane space(GO:0005758)
0.0 0.1 GO:1990429 Pex17p-Pex14p docking complex(GO:1990415) peroxisomal importomer complex(GO:1990429)
0.0 1.9 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 2.5 GO:0000790 nuclear chromatin(GO:0000790)
0.0 0.3 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.0 5.0 GO:0000151 ubiquitin ligase complex(GO:0000151)
0.0 0.6 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 0.1 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.0 0.5 GO:0005643 nuclear pore(GO:0005643)
0.0 0.1 GO:0000808 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.0 0.2 GO:0005635 nuclear envelope(GO:0005635)
0.0 1.7 GO:0005654 nucleoplasm(GO:0005654)
0.0 2.4 GO:0005743 mitochondrial inner membrane(GO:0005743)
0.0 0.2 GO:0032300 mismatch repair complex(GO:0032300)
0.0 0.9 GO:0005667 transcription factor complex(GO:0005667)
0.0 0.5 GO:0031903 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.0 1.4 GO:0005759 mitochondrial matrix(GO:0005759)
0.0 0.4 GO:0000145 exocyst(GO:0000145)
0.0 0.5 GO:0000785 chromatin(GO:0000785)
0.0 0.1 GO:0048475 membrane coat(GO:0030117) coated membrane(GO:0048475)
0.0 0.2 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 28.3 GO:0005829 cytosol(GO:0005829)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 3.7 GO:0008909 isochorismate synthase activity(GO:0008909)
1.1 3.3 GO:1901474 azole transmembrane transporter activity(GO:1901474)
1.1 7.5 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.9 5.6 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.9 3.7 GO:0016920 pyroglutamyl-peptidase activity(GO:0016920)
0.9 3.6 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
0.8 2.5 GO:0010331 gibberellin binding(GO:0010331)
0.8 4.0 GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity(GO:1902417)
0.8 3.1 GO:0015603 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.7 0.7 GO:0046524 sucrose-phosphate synthase activity(GO:0046524)
0.6 0.6 GO:0030620 U2 snRNA binding(GO:0030620) pre-mRNA intronic binding(GO:0097157)
0.6 3.1 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.6 1.7 GO:0050403 trans-zeatin O-beta-D-glucosyltransferase activity(GO:0050403) cis-zeatin O-beta-D-glucosyltransferase activity(GO:0050502)
0.6 1.7 GO:0015292 uniporter activity(GO:0015292)
0.5 2.0 GO:0004348 glucosylceramidase activity(GO:0004348)
0.5 2.4 GO:0004108 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.5 1.5 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.4 1.3 GO:0051752 phosphoglucan, water dikinase activity(GO:0051752)
0.4 6.6 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.4 1.8 GO:0019172 glyoxalase III activity(GO:0019172)
0.4 1.3 GO:0008428 ribonuclease inhibitor activity(GO:0008428) 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity(GO:0047443)
0.4 2.1 GO:0047780 citrate dehydratase activity(GO:0047780)
0.4 1.2 GO:0070336 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
0.4 1.2 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
0.4 2.0 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.4 3.1 GO:0045543 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.4 3.0 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.4 1.1 GO:0047326 inositol-1,4,5-trisphosphate 6-kinase activity(GO:0000823) inositol tetrakisphosphate 3-kinase activity(GO:0000824) inositol-1,4,5-trisphosphate 3-kinase activity(GO:0008440) inositol tetrakisphosphate 5-kinase activity(GO:0047326)
0.4 2.5 GO:0017112 Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.4 1.4 GO:0030742 GTP-dependent protein binding(GO:0030742)
0.4 1.8 GO:0046870 cadmium ion binding(GO:0046870)
0.4 2.1 GO:0015369 calcium:cation antiporter activity(GO:0015368) calcium:proton antiporter activity(GO:0015369)
0.3 2.1 GO:0030544 Hsp70 protein binding(GO:0030544)
0.3 1.0 GO:0000386 second spliceosomal transesterification activity(GO:0000386)
0.3 2.4 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.3 2.0 GO:0030527 structural constituent of chromatin(GO:0030527)
0.3 2.6 GO:0004383 guanylate cyclase activity(GO:0004383)
0.3 1.9 GO:0001653 peptide receptor activity(GO:0001653)
0.3 2.5 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.3 2.2 GO:0050551 myrcene synthase activity(GO:0050551)
0.3 1.5 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.3 1.2 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.3 1.4 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.3 0.9 GO:0098748 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.3 0.6 GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)(GO:0016703)
0.3 1.1 GO:0047215 indole-3-acetate beta-glucosyltransferase activity(GO:0047215) UDP-glucose:4-aminobenzoate acylglucosyltransferase activity(GO:0080002)
0.3 5.4 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.3 0.6 GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity(GO:0052725)
0.3 1.9 GO:0005047 signal recognition particle binding(GO:0005047)
0.3 1.3 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.3 1.6 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.3 2.6 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.3 4.3 GO:0016157 sucrose synthase activity(GO:0016157)
0.2 0.2 GO:0003994 aconitate hydratase activity(GO:0003994)
0.2 1.0 GO:0030523 dihydrolipoamide S-acyltransferase activity(GO:0030523)
0.2 3.6 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.2 0.5 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.2 1.0 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.2 0.7 GO:0008192 mRNA guanylyltransferase activity(GO:0004484) polynucleotide 5'-phosphatase activity(GO:0004651) RNA guanylyltransferase activity(GO:0008192)
0.2 0.9 GO:0010296 prenylcysteine methylesterase activity(GO:0010296)
0.2 0.9 GO:0070006 metalloaminopeptidase activity(GO:0070006)
0.2 2.2 GO:0004806 triglyceride lipase activity(GO:0004806)
0.2 0.7 GO:0000170 sphingosine hydroxylase activity(GO:0000170)
0.2 1.1 GO:0004765 shikimate kinase activity(GO:0004765)
0.2 0.7 GO:0046920 alpha-(1->3)-fucosyltransferase activity(GO:0046920)
0.2 1.1 GO:0015203 polyamine transmembrane transporter activity(GO:0015203)
0.2 0.8 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity(GO:0010309)
0.2 1.5 GO:0008022 protein C-terminus binding(GO:0008022)
0.2 1.5 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.2 10.3 GO:0003993 acid phosphatase activity(GO:0003993)
0.2 0.8 GO:0043916 DNA-7-methylguanine glycosylase activity(GO:0043916)
0.2 1.0 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.2 0.6 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.2 0.4 GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.2 0.9 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.2 1.1 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.2 1.3 GO:0005247 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.2 1.7 GO:0030291 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.2 2.6 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.2 0.4 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.2 0.5 GO:0051669 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.2 2.2 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.2 1.1 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.2 3.4 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.2 3.2 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.2 0.9 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.2 1.6 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.2 1.5 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.2 0.5 GO:0016504 peptidase activator activity(GO:0016504)
0.2 1.9 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.2 0.5 GO:0004106 chorismate mutase activity(GO:0004106)
0.2 0.5 GO:0004438 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.2 1.0 GO:0004362 glutathione-disulfide reductase activity(GO:0004362)
0.2 5.5 GO:0005179 hormone activity(GO:0005179)
0.2 0.5 GO:0008517 folic acid transporter activity(GO:0008517)
0.2 4.3 GO:0051787 misfolded protein binding(GO:0051787)
0.2 2.7 GO:0003746 translation elongation factor activity(GO:0003746)
0.2 1.9 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.2 1.5 GO:0035198 miRNA binding(GO:0035198)
0.2 0.6 GO:0050284 sinapate 1-glucosyltransferase activity(GO:0050284)
0.1 1.3 GO:0004096 catalase activity(GO:0004096)
0.1 1.5 GO:0008865 fructokinase activity(GO:0008865)
0.1 2.7 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.1 0.4 GO:0008821 crossover junction endodeoxyribonuclease activity(GO:0008821)
0.1 0.4 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.1 1.3 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.1 0.7 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.1 0.4 GO:0019781 NEDD8 activating enzyme activity(GO:0019781)
0.1 0.7 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.1 0.9 GO:0016408 C-acyltransferase activity(GO:0016408)
0.1 2.7 GO:0019902 phosphatase binding(GO:0019902)
0.1 0.8 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.1 0.4 GO:0004814 arginine-tRNA ligase activity(GO:0004814)
0.1 7.5 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.1 1.5 GO:0008312 7S RNA binding(GO:0008312)
0.1 0.7 GO:0005457 GDP-fucose transmembrane transporter activity(GO:0005457)
0.1 0.4 GO:0070678 preprotein binding(GO:0070678)
0.1 7.7 GO:0004364 glutathione transferase activity(GO:0004364)
0.1 0.2 GO:0004860 protein kinase inhibitor activity(GO:0004860)
0.1 2.0 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.1 0.1 GO:0051765 inositol tetrakisphosphate kinase activity(GO:0051765)
0.1 1.3 GO:0034647 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.1 1.6 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.1 2.0 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.1 0.5 GO:0008251 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.1 0.8 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 0.2 GO:0030619 U1 snRNA binding(GO:0030619)
0.1 1.1 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.1 1.0 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.1 0.6 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.1 4.4 GO:0004707 MAP kinase activity(GO:0004707)
0.1 0.5 GO:0003935 GTP cyclohydrolase II activity(GO:0003935) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity(GO:0008686)
0.1 2.2 GO:0030276 clathrin binding(GO:0030276)
0.1 1.5 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.1 1.5 GO:0051117 ATPase binding(GO:0051117)
0.1 0.8 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.1 0.6 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.1 5.8 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.1 0.8 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.1 0.3 GO:0031624 ubiquitin conjugating enzyme binding(GO:0031624) ubiquitin-like protein conjugating enzyme binding(GO:0044390)
0.1 5.4 GO:0010857 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.1 2.8 GO:0004713 protein tyrosine kinase activity(GO:0004713)
0.1 0.5 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.1 0.4 GO:0015924 mannosyl-oligosaccharide mannosidase activity(GO:0015924)
0.1 0.4 GO:0031516 far-red light photoreceptor activity(GO:0031516)
0.1 0.2 GO:0051019 mitogen-activated protein kinase binding(GO:0051019)
0.1 1.7 GO:0015248 sterol transporter activity(GO:0015248)
0.1 2.2 GO:0008143 poly(A) binding(GO:0008143)
0.1 0.5 GO:0048027 mRNA 5'-UTR binding(GO:0048027)
0.1 1.0 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.1 0.3 GO:0016971 flavin-linked sulfhydryl oxidase activity(GO:0016971) thiol oxidase activity(GO:0016972)
0.1 0.4 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.1 9.8 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.1 10.1 GO:0046982 protein heterodimerization activity(GO:0046982)
0.1 0.3 GO:0000035 acyl binding(GO:0000035)
0.1 0.2 GO:0032791 lead ion binding(GO:0032791)
0.1 1.7 GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor(GO:0016641)
0.1 0.7 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.1 1.2 GO:0016251 obsolete general RNA polymerase II transcription factor activity(GO:0016251)
0.1 1.3 GO:0035064 methylated histone binding(GO:0035064)
0.1 1.3 GO:0046961 proton-transporting ATPase activity, rotational mechanism(GO:0046961)
0.1 0.3 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
0.1 3.1 GO:0003713 transcription coactivator activity(GO:0003713)
0.1 1.8 GO:0031386 protein tag(GO:0031386)
0.1 0.4 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.1 0.9 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.1 0.7 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.1 1.9 GO:0034212 peptide N-acetyltransferase activity(GO:0034212)
0.1 0.3 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.1 0.6 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.1 0.2 GO:0004140 dephospho-CoA kinase activity(GO:0004140)
0.1 0.3 GO:0004112 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113) polynucleotide 5'-hydroxyl-kinase activity(GO:0051731)
0.1 2.6 GO:0017137 Rab GTPase binding(GO:0017137)
0.1 0.4 GO:0046923 ER retention sequence binding(GO:0046923)
0.1 1.0 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.1 0.2 GO:0045437 uridine nucleosidase activity(GO:0045437) ribosylpyrimidine nucleosidase activity(GO:0050263)
0.1 3.6 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.1 0.3 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.1 2.3 GO:0016597 amino acid binding(GO:0016597)
0.1 22.4 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.1 1.6 GO:0004568 chitinase activity(GO:0004568)
0.1 0.3 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.1 0.6 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.1 0.3 GO:0070137 ubiquitin-like protein-specific endopeptidase activity(GO:0070137) SUMO-specific endopeptidase activity(GO:0070139)
0.1 2.0 GO:0051536 iron-sulfur cluster binding(GO:0051536) metal cluster binding(GO:0051540)
0.1 4.2 GO:0004843 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459)
0.1 3.3 GO:0043130 ubiquitin-like protein binding(GO:0032182) ubiquitin binding(GO:0043130)
0.1 1.9 GO:0036442 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553) hydrogen-exporting ATPase activity(GO:0036442)
0.1 5.3 GO:0051213 dioxygenase activity(GO:0051213)
0.1 0.2 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.1 4.9 GO:0003724 RNA helicase activity(GO:0003724)
0.1 0.6 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.1 0.9 GO:0052742 phosphatidylinositol kinase activity(GO:0052742)
0.1 0.9 GO:0015238 xenobiotic-transporting ATPase activity(GO:0008559) drug transmembrane transporter activity(GO:0015238)
0.1 0.6 GO:0008079 translation release factor activity(GO:0003747) translation termination factor activity(GO:0008079)
0.1 2.4 GO:0005347 ATP transmembrane transporter activity(GO:0005347)
0.1 0.2 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.1 0.4 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 0.7 GO:0051879 Hsp90 protein binding(GO:0051879)
0.1 0.1 GO:0000295 adenine nucleotide transmembrane transporter activity(GO:0000295)
0.1 0.3 GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity(GO:0017176)
0.1 0.4 GO:0004849 uridine kinase activity(GO:0004849)
0.1 0.3 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.1 0.2 GO:0015119 hexose phosphate transmembrane transporter activity(GO:0015119) glucose-6-phosphate transmembrane transporter activity(GO:0015152)
0.1 2.5 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.1 0.3 GO:0016312 inositol bisphosphate phosphatase activity(GO:0016312)
0.1 0.5 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.1 0.1 GO:0002020 protease binding(GO:0002020)
0.0 0.1 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.0 0.1 GO:0003933 GTP cyclohydrolase activity(GO:0003933)
0.0 0.3 GO:0070300 phosphatidic acid binding(GO:0070300)
0.0 0.2 GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity(GO:0004582)
0.0 0.4 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 2.1 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.0 1.1 GO:0008066 glutamate receptor activity(GO:0008066)
0.0 1.0 GO:0005543 phospholipid binding(GO:0005543)
0.0 0.4 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.0 0.4 GO:0101005 ubiquitinyl hydrolase activity(GO:0101005)
0.0 2.0 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.0 0.2 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.0 0.8 GO:0008536 Ran GTPase binding(GO:0008536)
0.0 3.7 GO:0051082 unfolded protein binding(GO:0051082)
0.0 1.0 GO:0003954 NADH dehydrogenase activity(GO:0003954)
0.0 1.8 GO:0019888 protein phosphatase regulator activity(GO:0019888)
0.0 0.9 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 1.7 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 2.9 GO:0000989 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.0 0.3 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.0 1.2 GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor(GO:0016682)
0.0 1.6 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.0 0.4 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.2 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.0 0.5 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.3 GO:0070122 isopeptidase activity(GO:0070122)
0.0 0.2 GO:0004739 pyruvate dehydrogenase activity(GO:0004738) pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.0 0.3 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.0 0.1 GO:0051777 ent-kaurenoate oxidase activity(GO:0051777)
0.0 0.2 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.0 0.3 GO:0000339 RNA cap binding(GO:0000339)
0.0 0.6 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.8 GO:0045309 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.2 GO:0004766 spermidine synthase activity(GO:0004766)
0.0 0.4 GO:0016755 transferase activity, transferring amino-acyl groups(GO:0016755)
0.0 4.1 GO:0032561 GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561)
0.0 3.3 GO:0003682 chromatin binding(GO:0003682)
0.0 0.6 GO:0030515 snoRNA binding(GO:0030515)
0.0 0.5 GO:0008144 drug binding(GO:0008144) cyclosporin A binding(GO:0016018)
0.0 1.3 GO:0015079 potassium ion transmembrane transporter activity(GO:0015079)
0.0 0.5 GO:0044389 ubiquitin-like protein ligase binding(GO:0044389)
0.0 1.9 GO:0003924 GTPase activity(GO:0003924)
0.0 0.5 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.7 GO:0050897 cobalt ion binding(GO:0050897)
0.0 1.0 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.4 GO:0003951 NAD+ kinase activity(GO:0003951)
0.0 1.2 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 4.0 GO:0005509 calcium ion binding(GO:0005509)
0.0 0.6 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.0 0.1 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.0 0.3 GO:0036002 pre-mRNA binding(GO:0036002)
0.0 1.2 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.1 GO:0009973 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.0 0.8 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.2 GO:0097177 translation activator activity(GO:0008494) mitochondrial ribosome binding(GO:0097177)
0.0 0.8 GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor(GO:0016671)
0.0 0.1 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.0 1.1 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.0 0.1 GO:0016635 oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor(GO:0016635)
0.0 0.2 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.0 0.5 GO:0051753 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.0 0.5 GO:0080044 quercetin 7-O-glucosyltransferase activity(GO:0080044)
0.0 0.8 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 0.1 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.0 0.1 GO:0004049 anthranilate synthase activity(GO:0004049)
0.0 0.2 GO:0047631 ADP-ribose diphosphatase activity(GO:0047631)
0.0 0.1 GO:0003785 actin monomer binding(GO:0003785)
0.0 0.2 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 0.0 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.0 0.2 GO:0030983 mismatched DNA binding(GO:0030983)
0.0 0.4 GO:0005337 nucleoside transmembrane transporter activity(GO:0005337)
0.0 0.2 GO:0004805 trehalose-phosphatase activity(GO:0004805)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.5 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.3 1.5 PID S1P S1P1 PATHWAY S1P1 pathway
0.3 1.3 PID CIRCADIAN PATHWAY Circadian rhythm pathway
0.3 1.5 PID PLK1 PATHWAY PLK1 signaling events
0.2 0.5 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
0.2 1.1 NABA ECM GLYCOPROTEINS Genes encoding structural ECM glycoproteins
0.1 0.1 PID PDGFRA PATHWAY PDGFR-alpha signaling pathway
0.1 0.2 ST ADRENERGIC Adrenergic Pathway
0.1 0.4 PID P73PATHWAY p73 transcription factor network
0.0 0.3 PID MTOR 4PATHWAY mTOR signaling pathway
0.0 0.4 PID ERBB1 DOWNSTREAM PATHWAY ErbB1 downstream signaling
0.0 0.1 PID AP1 PATHWAY AP-1 transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 3.5 REACTOME RECYCLING OF BILE ACIDS AND SALTS Genes involved in Recycling of bile acids and salts
0.5 2.1 REACTOME CITRIC ACID CYCLE TCA CYCLE Genes involved in Citric acid cycle (TCA cycle)
0.4 1.3 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.3 1.3 REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
0.2 0.9 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.2 0.8 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.1 4.2 REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT Genes involved in ABC-family proteins mediated transport
0.1 0.3 REACTOME DEADENYLATION OF MRNA Genes involved in Deadenylation of mRNA
0.1 0.4 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.1 0.4 REACTOME INTERFERON SIGNALING Genes involved in Interferon Signaling
0.1 0.2 REACTOME ARMS MEDIATED ACTIVATION Genes involved in ARMS-mediated activation
0.1 0.1 REACTOME SIGNAL ATTENUATION Genes involved in Signal attenuation
0.0 0.3 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER
0.0 0.1 REACTOME DEADENYLATION DEPENDENT MRNA DECAY Genes involved in Deadenylation-dependent mRNA decay
0.0 0.0 REACTOME MTORC1 MEDIATED SIGNALLING Genes involved in mTORC1-mediated signalling
0.0 0.1 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.0 0.4 REACTOME METABOLISM OF LIPIDS AND LIPOPROTEINS Genes involved in Metabolism of lipids and lipoproteins
0.0 0.1 REACTOME POST TRANSLATIONAL PROTEIN MODIFICATION Genes involved in Post-translational protein modification