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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT4G01280

Z-value: 0.93

Transcription factors associated with AT4G01280

Gene Symbol Gene ID Gene Info
AT4G01280
AT4G01280 Homeodomain-like superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT4G01280arTal_v1_Chr4_+_535198_5352410.222.6e-01Click!

Activity profile of AT4G01280 motif

Sorted Z-values of AT4G01280 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr1_+_6927736_6927736 1.79 AT1G19960.1
AT1G19960
transcription factor
arTal_v1_Chr1_-_5133860_5133860 1.72 AT1G14880.1
PCR1
PLANT CADMIUM RESISTANCE 1
arTal_v1_Chr3_-_21189859_21189967 1.67 AT3G57260.1
AT3G57260.2
BGL2
beta-1,3-glucanase 2
arTal_v1_Chr2_+_10856271_10856372 1.54 AT2G25510.1
AT2G25510.2
AT2G25510
transmembrane protein
arTal_v1_Chr4_+_8294446_8294452 1.52 AT4G14400.2
AT4G14400.3
ACD6
ankyrin repeat family protein
arTal_v1_Chr1_+_7949476_7949476 1.50 AT1G22500.1
ATL15
RING/U-box superfamily protein
arTal_v1_Chr5_+_7718118_7718118 1.50 AT5G23020.1
IMS2
2-isopropylmalate synthase 2
arTal_v1_Chr4_+_8294165_8294165 1.38 AT4G14400.1
ACD6
ankyrin repeat family protein
arTal_v1_Chr3_+_17268700_17268700 1.31 AT3G46900.1
COPT2
copper transporter 2
arTal_v1_Chr2_+_1966806_1966816 1.28 AT2G05380.1
AT2G05380.2
GRP3S
glycine-rich protein 3 short isoform
arTal_v1_Chr3_+_11033665_11033665 1.20 AT3G29035.1
NAC3
NAC domain containing protein 3
arTal_v1_Chr1_+_5204312_5204433 1.20 AT1G15125.1
AT1G15125.2
AT1G15125
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr4_+_10481619_10481619 1.19 AT4G19170.1
NCED4
nine-cis-epoxycarotenoid dioxygenase 4
arTal_v1_Chr2_+_1966610_1966610 1.11 AT2G05380.3
GRP3S
glycine-rich protein 3 short isoform
arTal_v1_Chr1_-_26726652_26726652 1.10 AT1G70890.1
MLP43
MLP-like protein 43
arTal_v1_Chr3_-_9575215_9575215 1.07 AT3G26170.1
CYP71B19
cytochrome P450, family 71, subfamily B, polypeptide 19
arTal_v1_Chr2_-_16690182_16690182 1.06 AT2G39980.1
AT2G39980
HXXXD-type acyl-transferase family protein
arTal_v1_Chr1_-_3756998_3756998 1.05 AT1G11210.1
AT1G11210
cotton fiber protein, putative (DUF761)
arTal_v1_Chr4_+_2445775_2445794 1.05 AT4G04830.1
AT4G04830.2
MSRB5
methionine sulfoxide reductase B5
arTal_v1_Chr2_+_2026162_2026162 1.04 AT2G05520.4
AT2G05520.5
AT2G05520.6
AT2G05520.3
GRP-3
glycine-rich protein 3
arTal_v1_Chr2_+_2025991_2025991 1.00 AT2G05520.2
AT2G05520.1
GRP-3
glycine-rich protein 3
arTal_v1_Chr4_-_7316871_7316871 0.99 AT4G12320.1
CYP706A6
cytochrome P450, family 706, subfamily A, polypeptide 6
arTal_v1_Chr2_-_6242541_6242541 0.98 AT2G14610.1
PR1
pathogenesis-related protein 1
arTal_v1_Chr1_-_28245453_28245581 0.96 AT1G75250.1
AT1G75250.2
RL6
RAD-like 6
arTal_v1_Chr5_+_5995479_5995479 0.95 AT5G18130.2
AT5G18130
transmembrane protein
arTal_v1_Chr5_-_9247540_9247540 0.95 AT5G26340.1
MSS1
Major facilitator superfamily protein
arTal_v1_Chr5_+_5995323_5995323 0.94 AT5G18130.1
AT5G18130
transmembrane protein
arTal_v1_Chr4_-_8870801_8870979 0.94 AT4G15530.7
AT4G15530.6
AT4G15530.5
AT4G15530.3
AT4G15530.4
AT4G15530.1
PPDK
pyruvate orthophosphate dikinase
arTal_v1_Chr5_-_15859911_15859911 0.94 AT5G39610.1
NAC6
NAC domain containing protein 6
arTal_v1_Chr4_-_1112033_1112033 0.92 AT4G02520.1
GSTF2
glutathione S-transferase PHI 2
arTal_v1_Chr4_+_11150049_11150049 0.92 AT4G20820.1
AT4G20820
FAD-binding Berberine family protein
arTal_v1_Chr4_-_15903523_15903523 0.90 AT4G32940.1
GAMMA-VPE
gamma vacuolar processing enzyme
arTal_v1_Chr5_+_7703041_7703092 0.90 AT5G23010.2
AT5G23010.1
AT5G23010.3
MAM1
methylthioalkylmalate synthase 1
arTal_v1_Chr2_+_15528877_15528877 0.89 AT2G36970.1
AT2G36970
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr3_-_826585_826585 0.88 AT3G03470.1
CYP89A9
cytochrome P450, family 87, subfamily A, polypeptide 9
arTal_v1_Chr1_-_30142697_30142697 0.88 AT1G80130.1
AT1G80130
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr2_+_11087280_11087280 0.87 AT2G26010.1
PDF1.3
plant defensin 1.3
arTal_v1_Chr3_-_2890520_2890574 0.86 AT3G09390.2
AT3G09390.1
MT2A
metallothionein 2A
arTal_v1_Chr4_+_13391293_13391344 0.84 AT4G26530.2
AT4G26530.1
FBA5
Aldolase superfamily protein
arTal_v1_Chr5_+_23225951_23225951 0.84 AT5G57340.2
AT5G57340.1
AT5G57340
ras guanine nucleotide exchange factor Q-like protein
arTal_v1_Chr3_+_22602816_22602910 0.84 AT3G61060.1
AT3G61060.2
PP2-A13
phloem protein 2-A13
arTal_v1_Chr3_-_9375671_9375671 0.83 AT3G25717.1
RTFL16
ROTUNDIFOLIA like 16
arTal_v1_Chr1_+_7366775_7366775 0.82 AT1G21050.1
AT1G21050
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
arTal_v1_Chr5_-_17831336_17831336 0.82 AT5G44260.1
AT5G44260
Zinc finger C-x8-C-x5-C-x3-H type family protein
arTal_v1_Chr5_-_7828724_7828724 0.82 AT5G23240.1
AT5G23240
DNAJ heat shock N-terminal domain-containing protein
arTal_v1_Chr5_+_17806397_17806397 0.81 AT5G44210.1
ERF9
erf domain protein 9
arTal_v1_Chr5_-_24083528_24083562 0.81 AT5G59780.2
AT5G59780.1
AT5G59780.3
MYB59
myb domain protein 59
arTal_v1_Chr2_-_11295918_11295918 0.80 AT2G26560.1
PLA2A
phospholipase A 2A
arTal_v1_Chr2_+_16765920_16765920 0.80 AT2G40130.2
AT2G40130
Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr5_-_16634012_16634012 0.80 AT5G41590.1
AT5G41590
LURP-one-like protein (DUF567)
arTal_v1_Chr1_-_24502776_24502776 0.79 AT1G65860.1
FMO GS-OX1
flavin-monooxygenase glucosinolate S-oxygenase 1
arTal_v1_Chr1_+_7366590_7366590 0.79 AT1G21050.2
AT1G21050
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
arTal_v1_Chr2_+_16765709_16765709 0.79 AT2G40130.1
AT2G40130
Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr1_-_13117235_13117235 0.79 AT1G35560.1
AT1G35560
TCP family transcription factor
arTal_v1_Chr5_+_23734273_23734273 0.78 AT5G58770.1
cPT4
Undecaprenyl pyrophosphate synthetase family protein
arTal_v1_Chr3_+_10538005_10538105 0.78 AT3G28270.2
AT3G28270.1
AT3G28270
transmembrane protein, putative (DUF677)
arTal_v1_Chr1_-_19443624_19443631 0.78 AT1G52200.1
AT1G52200.2
AT1G52200
PLAC8 family protein
arTal_v1_Chr3_-_16074929_16074929 0.78 AT3G44450.1
AT3G44450
hypothetical protein
arTal_v1_Chr3_-_18857040_18857040 0.78 AT3G50740.1
UGT72E1
UDP-glucosyl transferase 72E1
arTal_v1_Chr3_+_23135630_23135630 0.77 AT3G62550.1
AT3G62550
Adenine nucleotide alpha hydrolases-like superfamily protein
arTal_v1_Chr4_+_13390754_13390754 0.77 AT4G26530.3
FBA5
Aldolase superfamily protein
arTal_v1_Chr1_+_18932766_18932766 0.77 AT1G51090.1
AT1G51090
Heavy metal transport/detoxification superfamily protein
arTal_v1_Chr1_+_27670626_27670626 0.77 AT1G73600.1
AT1G73600
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr4_-_8869319_8869319 0.77 AT4G15530.2
PPDK
pyruvate orthophosphate dikinase
arTal_v1_Chr3_-_21183144_21183144 0.77 AT3G57240.1
BG3
beta-1,3-glucanase 3
arTal_v1_Chr1_+_27669152_27669152 0.77 AT1G73600.2
AT1G73600
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr4_-_13022996_13022996 0.76 AT4G25490.1
CBF1
C-repeat/DRE binding factor 1
arTal_v1_Chr1_-_21329944_21329944 0.76 AT1G57590.1
AT1G57590
Pectinacetylesterase family protein
arTal_v1_Chr1_-_29518028_29518028 0.76 AT1G78450.1
AT1G78450
SOUL heme-binding family protein
arTal_v1_Chr4_-_14393381_14393381 0.75 AT4G29190.1
OZF2
Zinc finger C-x8-C-x5-C-x3-H type family protein
arTal_v1_Chr1_-_28284036_28284168 0.75 AT1G75380.3
AT1G75380.1
AT1G75380.2
AT1G75380.4
BBD1
bifunctional nuclease in basal defense response 1
arTal_v1_Chr2_+_15192480_15192480 0.74 AT2G36220.1
AT2G36220
hypothetical protein
arTal_v1_Chr2_+_1076863_1076863 0.74 AT2G03550.1
AT2G03550
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr3_+_19431095_19431095 0.74 AT3G52430.1
PAD4
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr5_-_24501770_24501770 0.74 AT5G60900.1
RLK1
receptor-like protein kinase 1
arTal_v1_Chr5_-_17591737_17591737 0.74 AT5G43780.1
APS4
Pseudouridine synthase/archaeosine transglycosylase-like family protein
arTal_v1_Chr2_+_11364996_11364996 0.73 AT2G26695.2
AT2G26695.1
AT2G26695
Ran BP2/NZF zinc finger-like superfamily protein
arTal_v1_Chr5_+_17324909_17324909 0.72 AT5G43150.1
AT5G43150
elongation factor
arTal_v1_Chr1_-_20949281_20949281 0.71 AT1G56010.2
NAC1
NAC domain containing protein 1
arTal_v1_Chr5_+_6424779_6424779 0.71 AT5G19140.3
AILP1
aluminum induced protein with YGL and LRDR motifs
arTal_v1_Chr5_-_22312832_22312832 0.70 AT5G54960.1
PDC2
pyruvate decarboxylase-2
arTal_v1_Chr5_-_8101330_8101330 0.70 AT5G23980.1
FRO4
ferric reduction oxidase 4
arTal_v1_Chr1_-_11297379_11297379 0.69 AT1G31550.1
AT1G31550.2
AT1G31550
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr2_+_1682856_1682856 0.69 AT2G04795.1
AT2G04795
hypothetical protein
arTal_v1_Chr4_+_7304323_7304323 0.68 AT4G12290.2
AT4G12290
Copper amine oxidase family protein
arTal_v1_Chr1_-_149806_149848 0.68 AT1G01390.1
AT1G01390.2
AT1G01390
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr3_+_10694444_10694444 0.68 AT3G28540.2
AT3G28540
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr4_+_18130237_18130237 0.68 AT4G38860.1
AT4G38860
SAUR-like auxin-responsive protein family
arTal_v1_Chr4_+_17583992_17583992 0.68 AT4G37400.1
CYP81F3
cytochrome P450, family 81, subfamily F, polypeptide 3
arTal_v1_Chr2_+_9259511_9259511 0.68 AT2G21650.1
MEE3
Homeodomain-like superfamily protein
arTal_v1_Chr3_+_8172479_8172479 0.67 AT3G23000.1
CIPK7
CBL-interacting protein kinase 7
arTal_v1_Chr4_+_7303985_7303985 0.67 AT4G12290.1
AT4G12290
Copper amine oxidase family protein
arTal_v1_Chr3_-_1860797_1860797 0.67 AT3G06145.1
AT3G06145
RING zinc finger protein
arTal_v1_Chr4_-_13019400_13019400 0.67 AT4G25480.1
DREB1A
dehydration response element B1A
arTal_v1_Chr1_+_25213852_25213852 0.67 AT1G67330.1
AT1G67330
glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
arTal_v1_Chr5_+_25523827_25523827 0.67 AT5G63780.1
SHA1
RING/FYVE/PHD zinc finger superfamily protein
arTal_v1_Chr2_+_6518749_6518749 0.67 AT2G15050.3
AT2G15050.1
AT2G15050.2
LTP
lipid transfer protein
arTal_v1_Chr5_+_25524045_25524045 0.67 AT5G63780.2
SHA1
RING/FYVE/PHD zinc finger superfamily protein
arTal_v1_Chr1_-_7099892_7099892 0.66 AT1G20490.1
AT1G20490.2
AT1G20490
AMP-dependent synthetase and ligase family protein
arTal_v1_Chr4_-_8095749_8095749 0.66 AT4G14020.1
AT4G14020
Rapid alkalinization factor (RALF) family protein
arTal_v1_Chr1_+_28458691_28458691 0.66 AT1G75800.1
AT1G75800
Pathogenesis-related thaumatin superfamily protein
arTal_v1_Chr5_+_6423153_6423269 0.65 AT5G19140.2
AT5G19140.1
AILP1
aluminum induced protein with YGL and LRDR motifs
arTal_v1_Chr5_-_8916856_8916856 0.65 AT5G25610.1
RD22
BURP domain-containing protein
arTal_v1_Chr4_+_12414058_12414058 0.65 AT4G23870.1
AT4G23870
hypothetical protein
arTal_v1_Chr2_-_1359290_1359403 0.65 AT2G04080.2
AT2G04080.1
AT2G04080
MATE efflux family protein
arTal_v1_Chr1_+_2238017_2238154 0.64 AT1G07280.1
AT1G07280.2
AT1G07280.4
AT1G07280.3
AT1G07280
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr1_-_24062804_24062804 0.64 AT1G64780.1
AMT1%3B2
ammonium transporter 1;2
arTal_v1_Chr1_+_27975168_27975168 0.64 AT1G74430.1
MYB95
myb domain protein 95
arTal_v1_Chr4_-_11648644_11648644 0.64 AT4G21960.1
PRXR1
Peroxidase superfamily protein
arTal_v1_Chr5_-_17705793_17705793 0.64 AT5G44005.1
AT5G44005
hypothetical protein
arTal_v1_Chr5_+_25040540_25040540 0.64 AT5G62360.1
AT5G62360
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr3_+_21982989_21982989 0.64 AT3G59480.1
AT3G59480
pfkB-like carbohydrate kinase family protein
arTal_v1_Chr3_+_8152038_8152038 0.63 AT3G22970.2
AT3G22970.1
AT3G22970
hypothetical protein (DUF506)
arTal_v1_Chr3_+_10694175_10694175 0.63 AT3G28540.1
AT3G28540
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr4_-_17289728_17289728 0.63 AT4G36670.1
PMT6
Major facilitator superfamily protein
arTal_v1_Chr5_+_26664842_26664842 0.63 AT5G66790.1
AT5G66790
Protein kinase superfamily protein
arTal_v1_Chr4_-_15614544_15614544 0.62 AT4G32340.1
AT4G32340
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr2_-_14310608_14310608 0.62 AT2G33830.2
AT2G33830
Dormancy/auxin associated family protein
arTal_v1_Chr5_+_7379187_7379187 0.62 AT5G22300.1
AT5G22300.2
NIT4
nitrilase 4
arTal_v1_Chr2_+_7964326_7964326 0.62 AT2G18328.1
RL4
RAD-like 4
arTal_v1_Chr2_-_14310339_14310339 0.61 AT2G33830.1
AT2G33830
Dormancy/auxin associated family protein
arTal_v1_Chr1_+_3349082_3349220 0.61 AT1G10210.1
AT1G10210.3
AT1G10210.2
MPK1
mitogen-activated protein kinase 1
arTal_v1_Chr1_+_21136835_21136835 0.61 AT1G56430.1
NAS4
nicotianamine synthase 4
arTal_v1_Chr3_-_23319636_23319636 0.61 AT3G63110.1
IPT3
isopentenyltransferase 3
arTal_v1_Chr3_-_1776840_1776840 0.61 AT3G05937.1
AT3G05937
hypothetical protein
arTal_v1_Chr1_+_10236337_10236337 0.61 AT1G29280.1
WRKY65
WRKY DNA-binding protein 65
arTal_v1_Chr1_-_26540818_26540818 0.60 AT1G70420.1
AT1G70420
DNA ligase-like protein, putative (DUF1645)
arTal_v1_Chr2_-_1007186_1007186 0.60 AT2G03310.1
AT2G03310
transmembrane protein
arTal_v1_Chr5_+_17798262_17798281 0.60 AT5G44190.2
AT5G44190.1
GLK2
GOLDEN2-like 2
arTal_v1_Chr4_+_2076832_2076832 0.60 AT4G04293.1
AT4G04293

arTal_v1_Chr5_+_16324310_16324346 0.59 AT5G40780.2
AT5G40780.3
LHT1
lysine histidine transporter 1
arTal_v1_Chr3_-_16558169_16558169 0.59 AT3G45210.1
AT3G45210
transcription initiation factor TFIID subunit (Protein of unknown function, DUF584)
arTal_v1_Chr5_+_22246519_22246519 0.59 AT5G54770.1
THI1
thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4)
arTal_v1_Chr1_+_27976510_27976510 0.59 AT1G74430.2
MYB95
myb domain protein 95
arTal_v1_Chr5_+_2938193_2938193 0.59 AT5G09440.1
EXL4
EXORDIUM like 4
arTal_v1_Chr2_-_15623104_15623160 0.58 AT2G37200.1
AT2G37200.2
AT2G37200
Uncharacterized protein family (UPF0497)
arTal_v1_Chr1_-_16917053_16917053 0.58 AT1G44800.1
SIAR1
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr5_+_16675582_16675868 0.58 AT5G41700.5
AT5G41700.1
AT5G41700.3
AT5G41700.4
AT5G41700.2
UBC8
ubiquitin conjugating enzyme 8
arTal_v1_Chr2_-_8880388_8880440 0.58 AT2G20610.2
AT2G20610.1
SUR1
Tyrosine transaminase family protein
arTal_v1_Chr1_+_8003223_8003223 0.58 AT1G22630.1
AT1G22630
SSUH2-like protein
arTal_v1_Chr5_+_2446669_2446669 0.57 AT5G07690.1
MYB29
myb domain protein 29
arTal_v1_Chr5_-_3845711_3845711 0.57 AT5G11930.1
AT5G11930
Thioredoxin superfamily protein
arTal_v1_Chr2_-_10831655_10831655 0.57 AT2G25450.1
AT2G25450
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr2_+_6313883_6313883 0.57 AT2G14750.1
APK
APS kinase
arTal_v1_Chr2_+_13138882_13138997 0.57 AT2G30860.1
AT2G30860.2
GSTF9
glutathione S-transferase PHI 9
arTal_v1_Chr4_+_5244865_5244865 0.57 AT4G08300.1
UMAMIT17
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr1_-_27568281_27568281 0.57 AT1G73325.1
AT1G73325
Kunitz family trypsin and protease inhibitor protein
arTal_v1_Chr3_+_5554197_5554197 0.57 AT3G16360.2
AHP4
HPT phosphotransmitter 4
arTal_v1_Chr1_+_19603147_19603147 0.56 AT1G52618.1
AT1G52618
hypothetical protein
arTal_v1_Chr1_+_28145978_28145978 0.56 AT1G74940.1
AT1G74940
cyclin-dependent kinase, putative (DUF581)
arTal_v1_Chr1_+_7404328_7404328 0.56 AT1G21140.1
AT1G21140
Vacuolar iron transporter (VIT) family protein
arTal_v1_Chr2_-_7954680_7954785 0.56 AT2G18300.1
AT2G18300.3
AT2G18300.2
HBI1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr2_+_18626188_18626188 0.56 AT2G45180.1
AT2G45180
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr2_+_14783254_14783254 0.55 AT2G35070.1
AT2G35070.2
AT2G35070
transmembrane protein
arTal_v1_Chr1_+_26651840_26651840 0.55 AT1G70690.1
HWI1
Receptor-like protein kinase-related family protein
arTal_v1_Chr4_-_11393226_11393226 0.55 AT4G21380.2
AT4G21380.1
RK3
receptor kinase 3
arTal_v1_Chr1_+_24113109_24113109 0.55 AT1G64900.1
CYP89A2
cytochrome P450, family 89, subfamily A, polypeptide 2
arTal_v1_Chr1_-_7900335_7900335 0.55 AT1G22370.1
AT1G22370.2
UGT85A5
UDP-glucosyl transferase 85A5
arTal_v1_Chr4_-_11885533_11885533 0.55 AT4G22570.2
AT4G22570.1
APT3
adenine phosphoribosyl transferase 3
arTal_v1_Chr5_+_9617440_9617440 0.54 AT5G27280.1
AT5G27280
Zim17-type zinc finger protein
arTal_v1_Chr5_+_8217191_8217213 0.54 AT5G24210.1
AT5G24210.2
AT5G24210.3
AT5G24210
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr1_-_1969656_1969656 0.54 AT1G06460.1
ACD32.1
alpha-crystallin domain 32.1
arTal_v1_Chr2_+_16556801_16556801 0.54 AT2G39705.1
RTFL8
ROTUNDIFOLIA like 8
arTal_v1_Chr1_+_28740540_28740540 0.54 AT1G76590.1
AT1G76590
PLATZ transcription factor family protein
arTal_v1_Chr1_+_20048434_20048434 0.54 AT1G53700.1
WAG1
WAG 1
arTal_v1_Chr1_+_25999837_25999837 0.54 AT1G69160.1
AT1G69160
suppressor
arTal_v1_Chr4_+_6491017_6491017 0.54 AT4G10500.1
AT4G10500
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr5_+_15501126_15501184 0.54 AT5G38710.1
AT5G38710.2
AT5G38710
Methylenetetrahydrofolate reductase family protein
arTal_v1_Chr2_-_13307572_13307572 0.54 AT2G31230.1
ERF15
ethylene-responsive element binding factor 15
arTal_v1_Chr1_-_7504274_7504275 0.53 AT1G21440.1
AT1G21440.2
AT1G21440
Phosphoenolpyruvate carboxylase family protein
arTal_v1_Chr2_+_15228714_15228714 0.53 AT2G36320.1
AT2G36320
A20/AN1-like zinc finger family protein
arTal_v1_Chr1_-_7706198_7706254 0.53 AT1G21920.2
AT1G21920.1
AT1G21920
Histone H3 K4-specific methyltransferase SET7/9 family protein
arTal_v1_Chr4_+_8218261_8218261 0.52 AT4G14270.2
AT4G14270
polyadenylate-binding protein interacting protein
arTal_v1_Chr1_-_20172364_20172364 0.52 AT1G54040.1
ESP
epithiospecifier protein
arTal_v1_Chr4_+_2324878_2324878 0.52 AT4G04610.1
APR1
APS reductase 1
arTal_v1_Chr1_-_20173933_20173949 0.52 AT1G54040.3
AT1G54040.2
ESP
epithiospecifier protein
arTal_v1_Chr4_+_12314025_12314025 0.52 AT4G23610.1
AT4G23610
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
arTal_v1_Chr5_-_25517833_25517891 0.52 AT5G63760.1
AT5G63760.2
AT5G63760.3
AT5G63760.4
ARI15
RING/U-box superfamily protein
arTal_v1_Chr5_-_18588792_18588792 0.52 AT5G45820.1
CIPK20
CBL-interacting protein kinase 20
arTal_v1_Chr4_+_2505979_2505979 0.52 AT4G04925.1
AT4G04925
transmembrane protein
arTal_v1_Chr4_+_8218083_8218083 0.52 AT4G14270.1
AT4G14270
polyadenylate-binding protein interacting protein
arTal_v1_Chr1_-_20948969_20948969 0.52 AT1G56010.1
NAC1
NAC domain containing protein 1
arTal_v1_Chr3_-_16448844_16448844 0.52 AT3G44990.1
XTH31
xyloglucan endo-transglycosylase-related 8
arTal_v1_Chr4_+_12134973_12134973 0.52 AT4G23170.1
EP1
receptor-like protein kinase-related family protein
arTal_v1_Chr2_+_19151481_19151481 0.52 AT2G46650.1
CB5-C
cytochrome B5 isoform C
arTal_v1_Chr3_-_16735951_16735951 0.52 AT3G45600.1
AT3G45600.2
TET3
tetraspanin3
arTal_v1_Chr1_+_18984281_18984442 0.51 AT1G51200.1
AT1G51200.3
AT1G51200.4
AT1G51200.2
AT1G51200
A20/AN1-like zinc finger family protein
arTal_v1_Chr1_-_7978810_7978810 0.51 AT1G22570.1
AT1G22570
Major facilitator superfamily protein
arTal_v1_Chr4_+_14400920_14400932 0.51 AT4G29210.2
AT4G29210.1
GGT4
gamma-glutamyl transpeptidase 4
arTal_v1_Chr1_+_18030704_18030704 0.51 AT1G48745.1
AT1G48745
hypothetical protein
arTal_v1_Chr2_-_1824480_1824480 0.51 AT2G05100.1
AT2G05100.2
LHCB2.1
photosystem II light harvesting complex protein 2.1
arTal_v1_Chr4_+_8360996_8360996 0.51 AT4G14560.1
IAA1
indole-3-acetic acid inducible
arTal_v1_Chr1_-_7978447_7978447 0.51 AT1G22570.2
AT1G22570
Major facilitator superfamily protein
arTal_v1_Chr1_+_7337605_7337605 0.50 AT1G21000.1
AT1G21000
PLATZ transcription factor family protein
arTal_v1_Chr5_+_15911350_15911350 0.50 AT5G39760.1
HB23
homeobox protein 23
arTal_v1_Chr5_+_22980638_22980638 0.50 AT5G56840.1
AT5G56840
myb-like transcription factor family protein
arTal_v1_Chr5_-_20634618_20634618 0.50 AT5G50720.1
HVA22E
HVA22 homologue E
arTal_v1_Chr3_-_5598027_5598044 0.50 AT3G16470.2
AT3G16470.1
JR1
Mannose-binding lectin superfamily protein
arTal_v1_Chr4_-_9064786_9064786 0.50 AT4G16000.1
AT4G16000
hypothetical protein
arTal_v1_Chr2_-_6710856_6710856 0.50 AT2G15390.1
FUT4
fucosyltransferase 4

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G01280

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.1 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.4 1.3 GO:0017014 protein nitrosylation(GO:0017014) peptidyl-cysteine S-nitrosylation(GO:0018119) peptidyl-cysteine S-trans-nitrosylation(GO:0035606)
0.4 2.0 GO:0033591 response to L-ascorbic acid(GO:0033591)
0.3 1.0 GO:0010266 response to vitamin B1(GO:0010266)
0.3 0.3 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.3 0.9 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
0.3 2.8 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.3 0.8 GO:0033506 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.3 0.8 GO:1902347 response to strigolactone(GO:1902347)
0.2 1.5 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.2 1.5 GO:0043090 amino acid import(GO:0043090)
0.2 0.8 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.2 2.2 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.2 0.6 GO:0009228 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.2 0.6 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.2 2.4 GO:0010044 response to aluminum ion(GO:0010044)
0.2 2.5 GO:0009098 leucine biosynthetic process(GO:0009098)
0.2 1.5 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.2 0.5 GO:0033194 response to hydroperoxide(GO:0033194)
0.2 0.6 GO:0019499 cyanide metabolic process(GO:0019499)
0.2 0.6 GO:0030418 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.2 0.9 GO:0006624 vacuolar protein processing(GO:0006624)
0.1 0.4 GO:0080058 protein deglutathionylation(GO:0080058)
0.1 0.7 GO:0071466 xenobiotic metabolic process(GO:0006805) cellular response to xenobiotic stimulus(GO:0071466)
0.1 0.4 GO:0046521 sphingoid catabolic process(GO:0046521)
0.1 0.7 GO:0048464 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.1 0.8 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.1 0.4 GO:0010541 acropetal auxin transport(GO:0010541)
0.1 0.4 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.1 0.6 GO:0035627 ceramide transport(GO:0035627)
0.1 0.3 GO:0015800 acidic amino acid transport(GO:0015800)
0.1 0.5 GO:1902914 regulation of protein polyubiquitination(GO:1902914) positive regulation of protein polyubiquitination(GO:1902916)
0.1 0.5 GO:2000692 negative regulation of seed maturation(GO:2000692)
0.1 0.3 GO:0010028 xanthophyll cycle(GO:0010028)
0.1 0.4 GO:0015669 gas transport(GO:0015669)
0.1 1.0 GO:0043266 regulation of potassium ion transport(GO:0043266)
0.1 0.5 GO:1901404 regulation of chlorophyll catabolic process(GO:0010271) regulation of tetrapyrrole catabolic process(GO:1901404)
0.1 2.5 GO:0009269 response to desiccation(GO:0009269)
0.1 0.5 GO:0019419 sulfate reduction(GO:0019419)
0.1 1.3 GO:0010158 abaxial cell fate specification(GO:0010158)
0.1 0.4 GO:0030259 lipid glycosylation(GO:0030259)
0.1 0.3 GO:0035019 somatic stem cell population maintenance(GO:0035019)
0.1 0.7 GO:0015804 neutral amino acid transport(GO:0015804)
0.1 0.4 GO:0061062 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.1 0.3 GO:0010184 cytokinin transport(GO:0010184)
0.1 1.1 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.1 0.7 GO:0006597 spermine biosynthetic process(GO:0006597)
0.1 0.3 GO:0000050 urea cycle(GO:0000050)
0.1 0.8 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.1 0.6 GO:0009726 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.1 0.2 GO:0046898 response to cycloheximide(GO:0046898) cellular response to external biotic stimulus(GO:0071217)
0.1 0.8 GO:0090355 positive regulation of auxin metabolic process(GO:0090355)
0.1 1.6 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.1 0.4 GO:0015720 allantoin transport(GO:0015720)
0.1 0.3 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.1 0.4 GO:0008614 pyridoxine metabolic process(GO:0008614)
0.1 0.4 GO:0030322 stabilization of membrane potential(GO:0030322)
0.1 0.3 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.1 1.3 GO:0006538 glutamate catabolic process(GO:0006538)
0.1 0.6 GO:2000306 positive regulation of photomorphogenesis(GO:2000306)
0.1 0.4 GO:0010336 gibberellic acid homeostasis(GO:0010336)
0.1 0.9 GO:0010262 somatic embryogenesis(GO:0010262)
0.1 0.6 GO:0009061 anaerobic respiration(GO:0009061)
0.1 1.3 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.1 1.0 GO:0016559 peroxisome fission(GO:0016559)
0.1 0.3 GO:0071732 cellular response to nitric oxide(GO:0071732)
0.1 0.4 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.1 0.4 GO:0034766 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of ion transport(GO:0043271) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.1 0.2 GO:0046203 spermidine catabolic process(GO:0046203)
0.1 0.2 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 0.2 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.1 0.4 GO:1901568 icosanoid metabolic process(GO:0006690) fatty acid derivative metabolic process(GO:1901568)
0.1 0.2 GO:0009747 hexokinase-dependent signaling(GO:0009747)
0.1 0.1 GO:0015857 pyrimidine nucleobase transport(GO:0015855) uracil transport(GO:0015857)
0.1 1.0 GO:0010274 hydrotropism(GO:0010274)
0.1 0.3 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.1 0.7 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.1 0.7 GO:0009610 response to symbiotic fungus(GO:0009610)
0.1 0.9 GO:0080036 regulation of cytokinin-activated signaling pathway(GO:0080036)
0.1 0.5 GO:0006165 nucleoside diphosphate phosphorylation(GO:0006165)
0.1 1.0 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.1 0.2 GO:0009915 phloem sucrose loading(GO:0009915)
0.1 0.6 GO:0034052 positive regulation of plant-type hypersensitive response(GO:0034052)
0.1 0.2 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.1 0.7 GO:0015749 monosaccharide transport(GO:0015749)
0.1 0.6 GO:0080183 response to photooxidative stress(GO:0080183)
0.1 0.3 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.1 0.1 GO:0006517 protein deglycosylation(GO:0006517)
0.1 0.5 GO:0006882 cellular zinc ion homeostasis(GO:0006882)
0.1 0.4 GO:0010325 raffinose family oligosaccharide biosynthetic process(GO:0010325)
0.1 0.2 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.1 0.3 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.1 0.2 GO:0045332 phospholipid translocation(GO:0045332)
0.1 0.3 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.1 0.3 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.1 1.4 GO:0030091 protein repair(GO:0030091)
0.1 0.3 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.1 0.2 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.1 0.2 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.1 0.4 GO:0010359 regulation of anion channel activity(GO:0010359) regulation of transmembrane transporter activity(GO:0022898) regulation of ion transmembrane transporter activity(GO:0032412)
0.1 0.2 GO:2000058 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.1 0.8 GO:1901401 regulation of tetrapyrrole metabolic process(GO:1901401)
0.1 0.3 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.1 0.2 GO:0060964 regulation of gene silencing by miRNA(GO:0060964)
0.1 0.2 GO:0010289 homogalacturonan biosynthetic process(GO:0010289)
0.0 1.0 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 0.4 GO:0045903 positive regulation of translational fidelity(GO:0045903)
0.0 0.5 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.0 0.1 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.0 0.4 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.0 0.2 GO:0019745 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.0 0.9 GO:0031408 oxylipin metabolic process(GO:0031407) oxylipin biosynthetic process(GO:0031408)
0.0 0.9 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.0 0.1 GO:0045117 thiamine pyrophosphate transport(GO:0030974) vitamin transmembrane transport(GO:0035461) azole transport(GO:0045117)
0.0 0.7 GO:0051346 negative regulation of hydrolase activity(GO:0051346)
0.0 0.8 GO:0010492 maintenance of shoot apical meristem identity(GO:0010492)
0.0 0.1 GO:0010235 guard mother cell cytokinesis(GO:0010235)
0.0 0.2 GO:0006678 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.0 0.6 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 0.1 GO:0042539 hypotonic salinity response(GO:0042539)
0.0 0.3 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.0 0.3 GO:0015969 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.0 0.1 GO:0010507 negative regulation of autophagy(GO:0010507)
0.0 0.2 GO:0043153 entrainment of circadian clock by photoperiod(GO:0043153)
0.0 0.1 GO:0006474 N-terminal protein amino acid acetylation(GO:0006474) N-terminal peptidyl-methionine acetylation(GO:0017196)
0.0 0.4 GO:0033617 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.0 0.6 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.4 GO:1900457 regulation of brassinosteroid mediated signaling pathway(GO:1900457)
0.0 0.2 GO:0035308 negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
0.0 0.2 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.0 1.9 GO:0010043 response to zinc ion(GO:0010043)
0.0 0.1 GO:0071569 protein ufmylation(GO:0071569)
0.0 0.4 GO:0043096 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.0 0.2 GO:0071836 nectar secretion(GO:0071836)
0.0 0.8 GO:0009944 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.0 0.3 GO:0010196 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.0 0.2 GO:0009660 amyloplast organization(GO:0009660)
0.0 0.5 GO:0010076 maintenance of floral meristem identity(GO:0010076)
0.0 0.4 GO:0052317 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.0 0.4 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.0 0.2 GO:0009745 sucrose mediated signaling(GO:0009745)
0.0 0.2 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.0 0.6 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.5 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.0 0.8 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.0 0.3 GO:0006552 leucine catabolic process(GO:0006552)
0.0 0.1 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.0 0.2 GO:0080190 lateral growth(GO:0080190)
0.0 0.1 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.0 0.1 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.0 0.3 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.0 0.3 GO:0009649 entrainment of circadian clock(GO:0009649)
0.0 0.3 GO:0007021 tubulin complex assembly(GO:0007021)
0.0 0.3 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.0 0.2 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.0 0.1 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.0 0.2 GO:0009684 indoleacetic acid biosynthetic process(GO:0009684)
0.0 0.4 GO:0007143 female meiotic division(GO:0007143)
0.0 0.2 GO:1900384 regulation of flavonol biosynthetic process(GO:1900384)
0.0 0.2 GO:0072334 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.0 0.4 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.0 0.3 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.0 0.2 GO:0010222 stem vascular tissue pattern formation(GO:0010222)
0.0 0.2 GO:0034059 response to anoxia(GO:0034059)
0.0 0.1 GO:0006751 glutathione catabolic process(GO:0006751)
0.0 0.4 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.0 0.1 GO:0080065 4-alpha-methyl-delta7-sterol oxidation(GO:0080065)
0.0 0.2 GO:0048530 fruit morphogenesis(GO:0048530)
0.0 0.3 GO:0006491 N-glycan processing(GO:0006491)
0.0 0.1 GO:0009590 detection of gravity(GO:0009590)
0.0 0.8 GO:0032509 endosome transport via multivesicular body sorting pathway(GO:0032509)
0.0 1.5 GO:0009626 plant-type hypersensitive response(GO:0009626)
0.0 0.2 GO:0006968 cellular defense response(GO:0006968)
0.0 0.0 GO:0010451 floral meristem growth(GO:0010451)
0.0 0.2 GO:0052482 defense response by cell wall thickening(GO:0052482)
0.0 0.2 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.0 0.1 GO:0080003 thalianol metabolic process(GO:0080003)
0.0 0.2 GO:0052543 callose deposition in cell wall(GO:0052543)
0.0 0.2 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.0 0.4 GO:0010229 inflorescence development(GO:0010229)
0.0 0.2 GO:2000114 regulation of establishment of cell polarity(GO:2000114)
0.0 0.1 GO:0010500 transmitting tissue development(GO:0010500)
0.0 0.5 GO:0006814 sodium ion transport(GO:0006814)
0.0 0.3 GO:0032366 intracellular sterol transport(GO:0032366)
0.0 0.3 GO:0009957 epidermal cell fate specification(GO:0009957)
0.0 0.7 GO:0009960 endosperm development(GO:0009960)
0.0 0.1 GO:0010792 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
0.0 0.2 GO:0019632 shikimate metabolic process(GO:0019632)
0.0 0.2 GO:0009554 megasporogenesis(GO:0009554)
0.0 1.8 GO:0009734 auxin-activated signaling pathway(GO:0009734)
0.0 0.3 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.0 0.3 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.0 0.4 GO:0052803 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 0.1 GO:0055078 sodium ion homeostasis(GO:0055078)
0.0 0.9 GO:0048506 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.0 0.1 GO:0019323 pentose catabolic process(GO:0019323)
0.0 0.2 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.0 0.1 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.0 0.3 GO:0043966 histone H3 acetylation(GO:0043966)
0.0 0.3 GO:0032544 plastid translation(GO:0032544)
0.0 1.3 GO:0006090 pyruvate metabolic process(GO:0006090)
0.0 0.3 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.0 0.8 GO:1903052 positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436) positive regulation of proteasomal protein catabolic process(GO:1901800) positive regulation of proteolysis involved in cellular protein catabolic process(GO:1903052) positive regulation of cellular protein catabolic process(GO:1903364)
0.0 0.6 GO:0016575 histone deacetylation(GO:0016575)
0.0 0.2 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.0 0.7 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.0 0.1 GO:0051101 regulation of DNA binding(GO:0051101)
0.0 0.3 GO:0046352 disaccharide catabolic process(GO:0046352)
0.0 0.3 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.0 0.1 GO:0016598 protein arginylation(GO:0016598)
0.0 0.7 GO:0002239 response to oomycetes(GO:0002239)
0.0 0.2 GO:0010115 regulation of abscisic acid biosynthetic process(GO:0010115)
0.0 0.1 GO:0043903 regulation of symbiosis, encompassing mutualism through parasitism(GO:0043903) regulation of viral process(GO:0050792)
0.0 1.0 GO:0009631 cold acclimation(GO:0009631)
0.0 0.1 GO:0045905 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.0 0.1 GO:0046391 5-phosphoribose 1-diphosphate biosynthetic process(GO:0006015) 5-phosphoribose 1-diphosphate metabolic process(GO:0046391)
0.0 0.3 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.0 0.1 GO:0007266 Rho protein signal transduction(GO:0007266)
0.0 0.2 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.0 0.2 GO:0060688 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.0 0.1 GO:0050898 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.0 0.3 GO:0006465 signal peptide processing(GO:0006465)
0.0 1.5 GO:0019684 photosynthesis, light reaction(GO:0019684)
0.0 0.2 GO:0046520 sphingoid biosynthetic process(GO:0046520)
0.0 0.6 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.1 GO:0015866 ADP transport(GO:0015866) ATP transport(GO:0015867)
0.0 1.2 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 1.4 GO:0009630 gravitropism(GO:0009630)
0.0 0.1 GO:0072337 modified amino acid transport(GO:0072337)
0.0 0.4 GO:1900424 regulation of defense response to bacterium(GO:1900424)
0.0 0.1 GO:0019433 triglyceride catabolic process(GO:0019433)
0.0 0.2 GO:0030834 regulation of actin filament depolymerization(GO:0030834)
0.0 0.3 GO:0005983 starch catabolic process(GO:0005983)
0.0 0.1 GO:0046713 borate transport(GO:0046713)
0.0 0.3 GO:0009901 anther dehiscence(GO:0009901)
0.0 0.1 GO:0071323 cellular response to chitin(GO:0071323)
0.0 0.1 GO:0006013 mannose metabolic process(GO:0006013)
0.0 0.1 GO:0010396 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.0 0.1 GO:0071108 protein K48-linked deubiquitination(GO:0071108)
0.0 0.2 GO:0009641 shade avoidance(GO:0009641)
0.0 0.1 GO:0018344 protein geranylgeranylation(GO:0018344)
0.0 0.2 GO:0042814 monopolar cell growth(GO:0042814)
0.0 0.1 GO:0016098 monoterpenoid metabolic process(GO:0016098) monoterpenoid biosynthetic process(GO:0016099)
0.0 0.2 GO:0042732 D-xylose metabolic process(GO:0042732)
0.0 0.3 GO:0071804 cellular potassium ion transport(GO:0071804) potassium ion transmembrane transport(GO:0071805)
0.0 0.1 GO:1902767 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.0 0.1 GO:1901001 negative regulation of response to salt stress(GO:1901001)
0.0 1.1 GO:0048527 lateral root development(GO:0048527)
0.0 0.1 GO:0015739 sialic acid transport(GO:0015739)
0.0 0.0 GO:0031538 negative regulation of anthocyanin metabolic process(GO:0031538)
0.0 0.1 GO:0070534 protein K63-linked ubiquitination(GO:0070534)
0.0 0.1 GO:0032418 lysosome localization(GO:0032418)
0.0 0.0 GO:0019859 thymine catabolic process(GO:0006210) thymine metabolic process(GO:0019859)
0.0 0.1 GO:0000304 response to singlet oxygen(GO:0000304)
0.0 0.1 GO:0061087 positive regulation of histone H3-K27 methylation(GO:0061087)
0.0 0.1 GO:0010093 specification of floral organ identity(GO:0010093)
0.0 0.1 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.0 0.3 GO:0045927 positive regulation of growth(GO:0045927)
0.0 0.0 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.0 0.0 GO:0009866 induced systemic resistance, ethylene mediated signaling pathway(GO:0009866)
0.0 0.1 GO:0046822 regulation of nucleocytoplasmic transport(GO:0046822)
0.0 0.2 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 0.1 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.0 0.1 GO:0018210 peptidyl-threonine phosphorylation(GO:0018107) peptidyl-threonine modification(GO:0018210)
0.0 0.2 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.0 GO:0031929 TOR signaling(GO:0031929)
0.0 0.6 GO:0000381 regulation of alternative mRNA splicing, via spliceosome(GO:0000381)
0.0 0.1 GO:0031053 primary miRNA processing(GO:0031053)
0.0 0.1 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.0 0.1 GO:0055075 potassium ion homeostasis(GO:0055075)
0.0 0.3 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.3 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.0 0.1 GO:0006379 mRNA cleavage(GO:0006379)
0.0 0.1 GO:0010160 formation of organ boundary(GO:0010160) organ formation(GO:0048645) formation of anatomical boundary(GO:0048859)
0.0 0.5 GO:0006897 endocytosis(GO:0006897)
0.0 0.0 GO:0010387 COP9 signalosome assembly(GO:0010387)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 2.8 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.1 0.9 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.1 0.3 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.1 0.8 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.1 0.4 GO:0009522 photosystem I(GO:0009522)
0.1 0.5 GO:0031372 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.1 1.5 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.1 0.4 GO:0005787 signal peptidase complex(GO:0005787)
0.1 1.0 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.1 0.2 GO:0097196 Shu complex(GO:0097196)
0.1 3.7 GO:0030176 integral component of endoplasmic reticulum membrane(GO:0030176)
0.1 0.3 GO:0005765 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)
0.0 0.4 GO:0016471 vacuolar proton-transporting V-type ATPase complex(GO:0016471)
0.0 0.1 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.0 0.1 GO:0031417 N-terminal protein acetyltransferase complex(GO:0031414) NatC complex(GO:0031417)
0.0 0.3 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.0 0.6 GO:0031231 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.0 0.2 GO:0016461 unconventional myosin complex(GO:0016461)
0.0 2.4 GO:0010287 plastoglobule(GO:0010287)
0.0 0.1 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.0 2.3 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 1.2 GO:0009543 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.0 0.4 GO:0000815 ESCRT III complex(GO:0000815)
0.0 0.2 GO:0070552 BRISC complex(GO:0070552)
0.0 0.1 GO:0016328 lateral plasma membrane(GO:0016328)
0.0 0.3 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 0.2 GO:0030897 HOPS complex(GO:0030897)
0.0 0.1 GO:0005846 nuclear cap binding complex(GO:0005846)
0.0 1.1 GO:0009504 cell plate(GO:0009504)
0.0 0.2 GO:0016272 prefoldin complex(GO:0016272)
0.0 0.4 GO:0030125 clathrin vesicle coat(GO:0030125)
0.0 0.3 GO:0005675 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.0 0.1 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.0 0.1 GO:0005775 vacuolar lumen(GO:0005775)
0.0 0.1 GO:0002189 ribose phosphate diphosphokinase complex(GO:0002189)
0.0 0.2 GO:0000813 ESCRT I complex(GO:0000813)
0.0 0.3 GO:0005720 nuclear heterochromatin(GO:0005720)
0.0 1.1 GO:0009707 chloroplast outer membrane(GO:0009707)
0.0 0.1 GO:0038201 TORC1 complex(GO:0031931) TOR complex(GO:0038201)
0.0 0.1 GO:0055038 recycling endosome membrane(GO:0055038)
0.0 2.2 GO:0000790 nuclear chromatin(GO:0000790)
0.0 0.1 GO:1990726 Lsm1-7-Pat1 complex(GO:1990726)
0.0 0.0 GO:0097361 CIA complex(GO:0097361)
0.0 0.3 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.0 0.3 GO:0031306 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.1 GO:0043078 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.0 0.3 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.1 GO:0090397 stigma papilla(GO:0090397)
0.0 0.0 GO:0000243 commitment complex(GO:0000243)
0.0 1.1 GO:0016604 nuclear body(GO:0016604)
0.0 0.6 GO:0009528 plastid inner membrane(GO:0009528)
0.0 0.1 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 2.4 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.4 1.3 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.4 1.3 GO:0035605 peptidyl-cysteine S-nitrosylase activity(GO:0035605)
0.4 2.8 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.3 0.8 GO:0080106 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.2 0.7 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.2 0.7 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.2 0.8 GO:0019156 isoamylase activity(GO:0019156)
0.2 0.6 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.2 0.7 GO:0004349 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.2 0.9 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.2 0.9 GO:0005355 glucose transmembrane transporter activity(GO:0005355)
0.2 0.7 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.2 0.7 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.2 0.5 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
0.2 1.4 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.2 0.6 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.1 0.6 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.1 0.4 GO:0005344 oxygen transporter activity(GO:0005344)
0.1 0.6 GO:0047158 sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity(GO:0047158)
0.1 0.9 GO:0016815 nitrilase activity(GO:0000257) hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles(GO:0016815) nitrile hydratase activity(GO:0018822) indole-3-acetonitrile nitrilase activity(GO:0080061)
0.1 0.4 GO:0016906 sterol 3-beta-glucosyltransferase activity(GO:0016906)
0.1 0.4 GO:0008428 ribonuclease inhibitor activity(GO:0008428) 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity(GO:0047443)
0.1 0.8 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.1 0.5 GO:0033741 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.1 0.7 GO:0016768 spermine synthase activity(GO:0016768)
0.1 1.3 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.1 0.4 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.1 1.3 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.1 0.4 GO:0050403 trans-zeatin O-beta-D-glucosyltransferase activity(GO:0050403) cis-zeatin O-beta-D-glucosyltransferase activity(GO:0050502)
0.1 0.4 GO:0004424 imidazoleglycerol-phosphate dehydratase activity(GO:0004424)
0.1 0.6 GO:0046624 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.1 0.6 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.1 0.3 GO:0016643 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.1 1.6 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.1 0.3 GO:0046422 violaxanthin de-epoxidase activity(GO:0046422)
0.1 0.4 GO:0032791 lead ion binding(GO:0032791)
0.1 0.8 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.1 0.5 GO:0000048 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.1 0.3 GO:0010331 gibberellin binding(GO:0010331)
0.1 0.5 GO:0030371 translation repressor activity(GO:0030371)
0.1 1.1 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.1 1.3 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.1 0.3 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.1 0.5 GO:0015367 oxoglutarate:malate antiporter activity(GO:0015367)
0.1 0.4 GO:0019825 oxygen binding(GO:0019825)
0.1 0.3 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.1 0.4 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.1 1.0 GO:0031127 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.1 0.3 GO:0016262 protein N-acetylglucosaminyltransferase activity(GO:0016262)
0.1 0.3 GO:0033984 indole-3-glycerol-phosphate lyase activity(GO:0033984)
0.1 0.4 GO:0022840 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.1 0.4 GO:0008905 mannose-phosphate guanylyltransferase activity(GO:0008905)
0.1 0.8 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.1 0.6 GO:0042299 lupeol synthase activity(GO:0042299)
0.1 0.6 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.1 0.7 GO:0035198 miRNA binding(GO:0035198)
0.1 0.3 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.1 0.8 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.1 0.2 GO:0043812 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.1 0.3 GO:0004127 cytidylate kinase activity(GO:0004127)
0.1 0.2 GO:0004557 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
0.1 0.2 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.1 0.4 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.1 0.5 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.1 0.5 GO:0005350 pyrimidine nucleobase transmembrane transporter activity(GO:0005350) uracil transmembrane transporter activity(GO:0015210)
0.1 0.6 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.1 1.0 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.1 0.2 GO:0035197 siRNA binding(GO:0035197)
0.1 0.3 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 0.6 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.1 0.5 GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors(GO:0016730)
0.1 0.2 GO:0051777 ent-kaurenoate oxidase activity(GO:0051777)
0.1 0.2 GO:0046524 sucrose-phosphate synthase activity(GO:0046524)
0.1 0.3 GO:0047780 citrate dehydratase activity(GO:0047780)
0.0 0.8 GO:0015179 L-amino acid transmembrane transporter activity(GO:0015179)
0.0 0.4 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.0 0.9 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.1 GO:0052625 4-aminobenzoate amino acid synthetase activity(GO:0052625) benzoate amino acid synthetase activity(GO:0052626) vanillate amino acid synthetase activity(GO:0052627) 4-hydroxybenzoate amino acid synthetase activity(GO:0052628)
0.0 0.1 GO:0090422 azole transporter activity(GO:0045118) thiamine pyrophosphate transporter activity(GO:0090422)
0.0 0.2 GO:0004348 glucosylceramidase activity(GO:0004348)
0.0 0.4 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.0 0.3 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.0 0.7 GO:0015301 anion:anion antiporter activity(GO:0015301)
0.0 0.3 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.0 0.3 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.0 0.4 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.0 0.2 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.0 0.3 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.0 0.3 GO:0010011 auxin binding(GO:0010011)
0.0 0.1 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
0.0 0.2 GO:0030527 structural constituent of chromatin(GO:0030527)
0.0 0.2 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.0 0.2 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.0 0.5 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.9 GO:0004693 cyclin-dependent protein serine/threonine kinase activity(GO:0004693) cyclin-dependent protein kinase activity(GO:0097472)
0.0 1.4 GO:0044390 ubiquitin-like protein conjugating enzyme binding(GO:0044390)
0.0 0.1 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.0 0.2 GO:0004765 shikimate kinase activity(GO:0004765)
0.0 0.2 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.0 0.5 GO:0030674 protein binding, bridging(GO:0030674)
0.0 0.1 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.0 1.0 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.0 0.2 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.0 0.4 GO:0004565 beta-galactosidase activity(GO:0004565) galactosidase activity(GO:0015925)
0.0 0.4 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.0 1.6 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.8 GO:0016168 chlorophyll binding(GO:0016168)
0.0 4.0 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 0.1 GO:1990247 N6-methyladenosine-containing RNA binding(GO:1990247)
0.0 0.2 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.0 0.2 GO:0017112 Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.0 0.2 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.0 0.2 GO:0017050 D-erythro-sphingosine kinase activity(GO:0017050)
0.0 0.1 GO:1990381 ubiquitin-specific protease binding(GO:1990381)
0.0 0.2 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.0 0.2 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.0 0.3 GO:0034647 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.0 0.2 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.0 0.4 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.4 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.0 1.5 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.0 0.2 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.0 0.4 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.0 0.3 GO:0034979 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 0.1 GO:0000403 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
0.0 0.2 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.0 0.2 GO:0005221 intracellular cyclic nucleotide activated cation channel activity(GO:0005221) cyclic nucleotide-gated ion channel activity(GO:0043855)
0.0 0.1 GO:0000170 sphingosine hydroxylase activity(GO:0000170)
0.0 0.2 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.0 0.5 GO:0030276 clathrin binding(GO:0030276)
0.0 0.2 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.0 0.2 GO:2001070 starch binding(GO:2001070)
0.0 0.1 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.0 0.6 GO:0032934 sterol binding(GO:0032934)
0.0 0.4 GO:0004029 aldehyde dehydrogenase (NAD) activity(GO:0004029)
0.0 0.1 GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity(GO:0008534)
0.0 0.3 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.0 0.1 GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity(GO:0008963)
0.0 0.9 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.1 GO:0031177 phosphopantetheine binding(GO:0031177)
0.0 0.1 GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity(GO:0003848) dihydropteroate synthase activity(GO:0004156)
0.0 0.1 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.0 0.5 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 0.1 GO:0072328 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.0 0.5 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.8 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.1 GO:0019776 Atg8 ligase activity(GO:0019776) Atg8 activating enzyme activity(GO:0019779)
0.0 0.1 GO:0004057 arginyltransferase activity(GO:0004057)
0.0 0.1 GO:0008936 nicotinamidase activity(GO:0008936)
0.0 1.5 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 0.1 GO:0051723 protein methylesterase activity(GO:0051723)
0.0 0.4 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.1 GO:0004749 ribose phosphate diphosphokinase activity(GO:0004749)
0.0 0.2 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.0 2.6 GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709)
0.0 1.3 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.0 0.3 GO:0047631 ADP-ribose diphosphatase activity(GO:0047631)
0.0 0.4 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.0 0.1 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.0 0.0 GO:0080042 ADP-glucose pyrophosphohydrolase activity(GO:0080042)
0.0 0.3 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.0 0.1 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.0 0.4 GO:0070566 adenylyltransferase activity(GO:0070566)
0.0 0.4 GO:0008066 intracellular ligand-gated ion channel activity(GO:0005217) glutamate receptor activity(GO:0008066)
0.0 0.1 GO:0052654 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.0 0.1 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.0 2.7 GO:0030246 carbohydrate binding(GO:0030246)
0.0 1.9 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 0.1 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.0 0.1 GO:0070569 uridylyltransferase activity(GO:0070569)
0.0 0.3 GO:0060590 ATPase regulator activity(GO:0060590)
0.0 0.3 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.0 0.0 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.0 0.8 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.0 0.1 GO:0043546 molybdopterin cofactor binding(GO:0043546)
0.0 0.1 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.0 0.3 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 0.2 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.0 0.1 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.0 0.1 GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity(GO:0003857)
0.0 0.1 GO:0015105 arsenite transmembrane transporter activity(GO:0015105)
0.0 0.1 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.0 0.1 GO:0016463 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.0 0.1 GO:0048487 beta-tubulin binding(GO:0048487)
0.0 0.1 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.0 0.3 GO:0031386 protein tag(GO:0031386)
0.0 0.1 GO:0005247 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.0 0.1 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.2 GO:0004311 farnesyltranstransferase activity(GO:0004311)
0.0 0.2 GO:0019210 kinase inhibitor activity(GO:0019210)
0.0 0.2 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.0 3.1 GO:0020037 heme binding(GO:0020037)
0.0 0.1 GO:0008079 translation release factor activity(GO:0003747) translation termination factor activity(GO:0008079)
0.0 0.2 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.0 0.3 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 0.1 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.0 0.1 GO:0003906 DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906)
0.0 0.0 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.0 0.0 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.0 0.0 GO:0097001 sphingolipid binding(GO:0046625) ceramide binding(GO:0097001)
0.0 0.1 GO:0016844 strictosidine synthase activity(GO:0016844)
0.0 0.1 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.0 3.1 GO:0019787 ubiquitin-like protein transferase activity(GO:0019787)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.8 PID CIRCADIAN PATHWAY Circadian rhythm pathway
0.1 0.9 PID AP1 PATHWAY AP-1 transcription factor network
0.1 0.4 PID NFAT TFPATHWAY Calcineurin-regulated NFAT-dependent transcription in lymphocytes
0.1 0.2 PID ENDOTHELIN PATHWAY Endothelins
0.1 0.3 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.0 0.5 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.0 0.2 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.0 0.2 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.0 0.2 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway
0.0 0.2 PID E2F PATHWAY E2F transcription factor network
0.0 0.0 PID RAC1 PATHWAY RAC1 signaling pathway
0.0 0.0 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.3 REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION Genes involved in GABA synthesis, release, reuptake and degradation
0.2 0.8 REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
0.1 0.6 REACTOME METABOLISM OF NUCLEOTIDES Genes involved in Metabolism of nucleotides
0.1 0.3 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.1 0.9 REACTOME INTERFERON SIGNALING Genes involved in Interferon Signaling
0.1 0.2 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.1 0.2 REACTOME P130CAS LINKAGE TO MAPK SIGNALING FOR INTEGRINS Genes involved in p130Cas linkage to MAPK signaling for integrins
0.0 0.2 REACTOME PHASE II CONJUGATION Genes involved in Phase II conjugation
0.0 0.1 REACTOME PREFOLDIN MEDIATED TRANSFER OF SUBSTRATE TO CCT TRIC Genes involved in Prefoldin mediated transfer of substrate to CCT/TriC
0.0 0.1 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.0 0.2 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.0 0.1 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.0 0.2 REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION Genes involved in Antigen processing: Ubiquitination & Proteasome degradation
0.0 0.1 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER
0.0 0.0 REACTOME DEADENYLATION DEPENDENT MRNA DECAY Genes involved in Deadenylation-dependent mRNA decay