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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT4G18450

Z-value: 0.53

Transcription factors associated with AT4G18450

Gene Symbol Gene ID Gene Info
AT4G18450
AT4G18450 Integrase-type DNA-binding superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT4G18450arTal_v1_Chr4_-_10191252_101912520.403.4e-02Click!

Activity profile of AT4G18450 motif

Sorted Z-values of AT4G18450 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr1_+_28177670_28177670 2.12 AT1G75040.1
PR5
pathogenesis-related protein 5
arTal_v1_Chr1_-_5645443_5645443 1.98 AT1G16510.1
AT1G16510
SAUR-like auxin-responsive protein family
arTal_v1_Chr4_+_17440177_17440177 1.83 AT4G36990.1
HSF4
heat shock factor 4
arTal_v1_Chr1_-_5338326_5338326 1.79 AT1G15520.1
AT1G15520.2
ABCG40
pleiotropic drug resistance 12
arTal_v1_Chr3_-_1776840_1776840 1.78 AT3G05937.1
AT3G05937
hypothetical protein
arTal_v1_Chr1_+_20876440_20876440 1.74 AT1G55850.1
CSLE1
cellulose synthase like E1
arTal_v1_Chr4_+_7239200_7239200 1.52 AT4G12080.1
AHL1
AT-hook motif nuclear-localized protein 1
arTal_v1_Chr4_-_12890261_12890262 1.51 AT4G25110.2
AT4G25110.1
MC2
metacaspase 2
arTal_v1_Chr1_-_19690589_19690589 1.47 AT1G52880.1
NAM
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
arTal_v1_Chr5_-_25764420_25764420 1.39 AT5G64430.1
AT5G64430
Octicosapeptide/Phox/Bem1p family protein
arTal_v1_Chr3_+_4049309_4049309 1.36 AT3G12740.1
ALIS1
ALA-interacting subunit 1
arTal_v1_Chr1_+_5090809_5090809 1.33 AT1G14780.1
AT1G14780
MAC/Perforin domain-containing protein
arTal_v1_Chr3_+_16383595_16383595 1.28 AT3G44880.1
ACD1
Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein
arTal_v1_Chr3_-_20361560_20361560 1.26 AT3G54950.1
pPLAIIIbeta
patatin-like protein 6
arTal_v1_Chr5_+_25692425_25692425 1.24 AT5G64230.1
AT5G64230
1,8-cineole synthase
arTal_v1_Chr3_+_19431095_19431095 1.23 AT3G52430.1
PAD4
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr1_-_25445357_25445357 1.23 AT1G67860.1
AT1G67860
transmembrane protein
arTal_v1_Chr1_-_25446952_25446952 1.21 AT1G67865.1
AT1G67865
hypothetical protein
arTal_v1_Chr1_-_25447622_25447622 1.21 AT1G67865.2
AT1G67865
hypothetical protein
arTal_v1_Chr3_-_1791887_1791887 1.16 AT3G05970.1
LACS6
long-chain acyl-CoA synthetase 6
arTal_v1_Chr1_+_8549191_8549251 1.15 AT1G24150.2
AT1G24150.1
FH4
formin homologue 4
arTal_v1_Chr1_-_30142697_30142697 1.15 AT1G80130.1
AT1G80130
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr3_+_6536534_6536534 1.13 AT3G18950.1
AT3G18950
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr3_+_590425_590425 1.11 AT3G02740.1
AT3G02740.2
AT3G02740
Eukaryotic aspartyl protease family protein
arTal_v1_Chr5_-_23725585_23725585 1.11 AT5G58730.1
Mik
pfkB-like carbohydrate kinase family protein
arTal_v1_Chr4_+_13847549_13847549 1.05 AT4G27780.2
AT4G27780.1
ACBP2
acyl-CoA binding protein 2
arTal_v1_Chr2_-_16115204_16115204 1.05 AT2G38490.1
CIPK22
CBL-interacting Serine/Threonine-kinase
arTal_v1_Chr4_-_15507176_15507312 1.04 AT4G32070.2
AT4G32070.1
Phox4
Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
arTal_v1_Chr2_-_11685342_11685342 1.04 AT2G27310.1
AT2G27310
F-box family protein
arTal_v1_Chr1_-_18477643_18477643 1.01 AT1G49900.1
AT1G49900
C2H2 type zinc finger transcription factor family
arTal_v1_Chr1_+_11181504_11181504 1.01 AT1G31280.1
AGO2
Argonaute family protein
arTal_v1_Chr4_-_9453300_9453300 1.00 AT4G16790.1
AT4G16790
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr2_+_15192480_15192480 0.97 AT2G36220.1
AT2G36220
hypothetical protein
arTal_v1_Chr4_+_17307709_17307709 0.94 AT4G36720.1
HVA22K
HVA22-like protein K
arTal_v1_Chr3_-_2695400_2695400 0.92 AT3G08850.1
RAPTOR1
Regulatory-associated protein of TOR 1
arTal_v1_Chr4_+_7731189_7731189 0.90 AT4G13270.1
AT4G13270
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
arTal_v1_Chr1_+_12004854_12004927 0.90 AT1G33110.1
AT1G33110.2
AT1G33110
MATE efflux family protein
arTal_v1_Chr2_-_9706217_9706217 0.90 AT2G22800.1
HAT9
Homeobox-leucine zipper protein family
arTal_v1_Chr5_-_7636576_7636576 0.89 AT5G22850.1
AT5G22850
Eukaryotic aspartyl protease family protein
arTal_v1_Chr1_+_28070295_28070296 0.88 AT1G74710.1
AT1G74710.2
EDS16
ADC synthase superfamily protein
arTal_v1_Chr1_+_22409298_22409298 0.88 AT1G60870.1
MEE9
maternal effect embryo arrest 9
arTal_v1_Chr5_+_866339_866339 0.86 AT5G03470.1
ATB' ALPHA
Protein phosphatase 2A regulatory B subunit family protein
arTal_v1_Chr5_+_16281394_16281404 0.86 AT5G40650.1
AT5G40650.2
SDH2-2
succinate dehydrogenase 2-2
arTal_v1_Chr3_+_21384146_21384146 0.85 AT3G57690.1
AGP23
arabinogalactan protein 23
arTal_v1_Chr1_-_7388512_7388512 0.85 AT1G21100.1
IGMT1
O-methyltransferase family protein
arTal_v1_Chr2_+_7564240_7564276 0.84 AT2G17420.1
AT2G17420.2
NTRA
NADPH-dependent thioredoxin reductase A
arTal_v1_Chr1_+_25788305_25788441 0.82 AT1G68690.2
AT1G68690.1
AT1G68690.3
PERK9
Protein kinase superfamily protein
arTal_v1_Chr3_+_2143488_2143488 0.82 AT3G06780.1
AT3G06780
glycine-rich protein
arTal_v1_Chr1_+_26830603_26830603 0.82 AT1G71170.1
AT1G71170
6-phosphogluconate dehydrogenase family protein
arTal_v1_Chr3_+_10782095_10782176 0.81 AT3G28720.2
AT3G28720.1
AT3G28720
transmembrane protein
arTal_v1_Chr2_-_9527845_9527845 0.79 AT2G22430.1
HB6
homeobox protein 6
arTal_v1_Chr5_+_4756057_4756057 0.79 AT5G14730.1
AT5G14730
hypothetical protein
arTal_v1_Chr3_+_6820926_6820926 0.79 AT3G19640.1
MGT4
magnesium transporter 4
arTal_v1_Chr4_+_16413974_16413998 0.78 AT4G34310.3
AT4G34310.1
AT4G34310.2
AT4G34310.5
AT4G34310.9
AT4G34310.8
AT4G34310.4
AT4G34310.7
AT4G34310.6
AT4G34310.10
AT4G34310
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr4_+_16997091_16997091 0.77 AT4G35890.2
AT4G35890.1
LARP1c
winged-helix DNA-binding transcription factor family protein
arTal_v1_Chr4_+_1042235_1042235 0.76 AT4G02370.1
AT4G02370
pectinesterase (Protein of unknown function, DUF538)
arTal_v1_Chr2_+_11669629_11669629 0.76 AT2G27260.1
AT2G27260
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
arTal_v1_Chr4_+_12909463_12909575 0.76 AT4G25170.1
AT4G25170.2
AT4G25170
Uncharacterized conserved protein (UCP012943)
arTal_v1_Chr2_-_17065813_17065813 0.74 AT2G40900.1
UMAMIT11
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr1_+_28163344_28163344 0.74 AT1G75000.1
AT1G75000
GNS1/SUR4 membrane protein family
arTal_v1_Chr4_+_10061214_10061214 0.73 AT4G18170.1
WRKY28
WRKY DNA-binding protein 28
arTal_v1_Chr2_+_114926_114926 0.73 AT2G01190.1
PDE331
Octicosapeptide/Phox/Bem1p family protein
arTal_v1_Chr1_-_12516521_12516521 0.73 AT1G34315.1
AT1G34315
transmembrane protein
arTal_v1_Chr4_-_9421857_9421857 0.73 AT4G16750.1
AT4G16750
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr4_-_8369312_8369312 0.73 AT4G14580.1
CIPK4
CBL-interacting protein kinase 4
arTal_v1_Chr1_-_344400_344400 0.72 AT1G01990.1
AT1G01990
hypothetical protein
arTal_v1_Chr1_-_27276317_27276317 0.72 AT1G72450.2
JAZ6
jasmonate-zim-domain protein 6
arTal_v1_Chr1_-_27276562_27276562 0.71 AT1G72450.1
JAZ6
jasmonate-zim-domain protein 6
arTal_v1_Chr4_+_9028262_9028262 0.70 AT4G15910.1
DI21
drought-induced 21
arTal_v1_Chr3_-_20552215_20552215 0.70 AT3G55430.1
AT3G55430
O-Glycosyl hydrolases family 17 protein
arTal_v1_Chr2_-_10988924_10988924 0.67 AT2G25760.2
AT2G25760
Protein kinase family protein
arTal_v1_Chr1_+_23527570_23527570 0.67 AT1G63440.1
HMA5
heavy metal atpase 5
arTal_v1_Chr1_-_2467058_2467165 0.66 AT1G07950.1
AT1G07950.2
MED22B
Surfeit locus protein 5 subunit 22 of Mediator complex
arTal_v1_Chr1_+_27784928_27784928 0.66 AT1G73880.1
UGT89B1
UDP-glucosyl transferase 89B1
arTal_v1_Chr2_-_10989117_10989117 0.66 AT2G25760.1
AT2G25760
Protein kinase family protein
arTal_v1_Chr5_-_9055255_9055255 0.66 AT5G25940.1
AT5G25940
early nodulin-like protein
arTal_v1_Chr1_+_17432433_17432500 0.66 AT1G47500.1
AT1G47500.2
RBP47C'
RNA-binding protein 47C'
arTal_v1_Chr4_+_9891051_9891051 0.66 AT4G17790.1
AT4G17790
SNARE associated Golgi protein family
arTal_v1_Chr3_+_2819040_2819094 0.65 AT3G09180.2
AT3G09180.1
AT3G09180.3
AT3G09180
mediator of RNA polymerase II transcription subunit
arTal_v1_Chr5_+_6369004_6369004 0.65 AT5G19050.1
AT5G19050
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr3_-_7445303_7445312 0.64 AT3G21215.2
AT3G21215.3
AT3G21215.4
AT3G21215.1
AT3G21215
RNA-binding (RRM/RBD/RNP motifs) family protein
arTal_v1_Chr4_+_14409772_14409871 0.64 AT4G29230.1
AT4G29230.2
AT4G29230.3
NAC075
NAC domain containing protein 75
arTal_v1_Chr3_-_1617339_1617339 0.64 AT3G05570.1
AT3G05570
dipeptide transport ATP-binding protein
arTal_v1_Chr1_-_29879204_29879279 0.63 AT1G79430.1
AT1G79430.2
APL
Homeodomain-like superfamily protein
arTal_v1_Chr2_+_6797111_6797111 0.63 AT2G15580.3
AT2G15580.1
AT2G15580
RING/U-box superfamily protein
arTal_v1_Chr3_-_4671796_4671796 0.62 AT3G14090.1
EXO70D3
exocyst subunit exo70 family protein D3
arTal_v1_Chr1_+_10214681_10214681 0.61 AT1G29230.1
CIPK18
CBL-interacting protein kinase 18
arTal_v1_Chr2_+_19079305_19079305 0.61 AT2G46490.1
AT2G46490
hypothetical protein
arTal_v1_Chr2_-_16042383_16042521 0.61 AT2G38290.2
AT2G38290.1
AMT2
ammonium transporter 2
arTal_v1_Chr2_+_6797335_6797335 0.61 AT2G15580.2
AT2G15580
RING/U-box superfamily protein
arTal_v1_Chr4_-_14859503_14859503 0.61 AT4G30370.1
AT4G30370
RING/U-box superfamily protein
arTal_v1_Chr1_-_30004083_30004083 0.61 AT1G79730.1
ELF7
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr1_+_2238017_2238154 0.61 AT1G07280.1
AT1G07280.2
AT1G07280.4
AT1G07280.3
AT1G07280
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr3_+_8163941_8163941 0.60 AT3G22990.1
LFR
ARM repeat superfamily protein
arTal_v1_Chr4_-_18062347_18062347 0.59 AT4G38640.1
AT4G38640
Plasma-membrane choline transporter family protein
arTal_v1_Chr5_-_20506354_20506354 0.58 AT5G50360.1
AT5G50360
von willebrand factor A domain protein
arTal_v1_Chr5_-_8343284_8343284 0.58 AT5G24430.1
AT5G24430
Calcium-dependent protein kinase (CDPK) family protein
arTal_v1_Chr1_-_16137463_16137463 0.58 AT1G42990.1
BZIP60
basic region/leucine zipper motif 60
arTal_v1_Chr3_-_5892216_5892332 0.57 AT3G17240.2
AT3G17240.3
AT3G17240.1
mtLPD2
lipoamide dehydrogenase 2
arTal_v1_Chr2_-_11777529_11777553 0.57 AT2G27580.2
AT2G27580.1
AT2G27580
A20/AN1-like zinc finger family protein
arTal_v1_Chr4_+_2471866_2471866 0.56 AT4G04885.1
PCFS4
PCF11P-similar protein 4
arTal_v1_Chr2_-_13835758_13835758 0.55 AT2G32600.1
AT2G32600
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr1_+_27026677_27026729 0.55 AT1G71860.1
AT1G71860.3
AT1G71860.2
PTP1
protein tyrosine phosphatase 1
arTal_v1_Chr1_+_12455653_12455653 0.55 AT1G34200.1
AT1G34200
Glyceraldehyde-3-phosphate dehydrogenase-like family protein
arTal_v1_Chr2_-_9266393_9266393 0.55 AT2G21660.2
GRP7
cold, circadian rhythm, and rna binding 2
arTal_v1_Chr4_-_7386931_7386931 0.54 AT4G12450.1
AT4G12450
zinc finger (C2H2 type) family protein
arTal_v1_Chr2_-_9266557_9266557 0.54 AT2G21660.1
GRP7
cold, circadian rhythm, and rna binding 2
arTal_v1_Chr2_-_17613591_17613660 0.51 AT2G42280.2
AT2G42280.3
AT2G42280.1
FBH4
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr2_+_216605_216695 0.50 AT2G01480.1
AT2G01480.2
AT2G01480
O-fucosyltransferase family protein
arTal_v1_Chr2_+_3618058_3618058 0.50 AT2G08986.1
AT2G08986
hypothetical protein
arTal_v1_Chr4_-_13016235_13016235 0.48 AT4G25470.1
CBF2
C-repeat/DRE binding factor 2
arTal_v1_Chr3_-_23200723_23200723 0.48 AT3G62710.1
AT3G62710
Glycosyl hydrolase family protein
arTal_v1_Chr5_+_8447954_8447954 0.47 AT5G24670.5
AT5G24670.4
AT5G24670.2
EMB2820
Cytidine/deoxycytidylate deaminase family protein
arTal_v1_Chr1_+_7404328_7404328 0.47 AT1G21140.1
AT1G21140
Vacuolar iron transporter (VIT) family protein
arTal_v1_Chr5_-_37999_37999 0.47 AT5G01100.1
FRB1
O-fucosyltransferase family protein
arTal_v1_Chr3_+_17937047_17937047 0.47 AT3G48430.2
REF6
relative of early flowering 6
arTal_v1_Chr5_+_21514896_21515026 0.47 AT5G53060.1
AT5G53060.3
AT5G53060.2
RCF3
RNA-binding KH domain-containing protein
arTal_v1_Chr5_-_6730395_6730407 0.46 AT5G19900.1
AT5G19900.2
AT5G19900.5
AT5G19900.4
AT5G19900.3
AT5G19900
PRLI-interacting factor
arTal_v1_Chr3_+_15405984_15405984 0.46 AT3G43520.1
AT3G43520
Transmembrane proteins 14C
arTal_v1_Chr1_+_25788600_25788600 0.46 AT1G68690.4
PERK9
Protein kinase superfamily protein
arTal_v1_Chr3_+_2940305_2940305 0.46 AT3G09570.1
AT3G09570
Lung seven transmembrane receptor family protein
arTal_v1_Chr1_+_5578265_5578265 0.45 AT1G16310.1
AT1G16310
Cation efflux family protein
arTal_v1_Chr1_+_23740493_23740562 0.45 AT1G63980.1
AT1G63980.2
AT1G63980
D111/G-patch domain-containing protein
arTal_v1_Chr1_-_30352208_30352208 0.44 AT1G80760.1
NIP6%3B1
NOD26-like intrinsic protein 6;1
arTal_v1_Chr4_+_9759203_9759203 0.44 AT4G17500.1
ERF-1
ethylene responsive element binding factor 1
arTal_v1_Chr2_+_3614986_3614986 0.43 AT2G07981.1
AT2G07981
hypothetical protein
arTal_v1_Chr5_+_9803647_9803647 0.43 AT5G27690.1
AT5G27690
Heavy metal transport/detoxification superfamily protein
arTal_v1_Chr1_+_3914774_3914774 0.43 AT1G11650.1
AT1G11650.2
RBP45B
RNA-binding (RRM/RBD/RNP motifs) family protein
arTal_v1_Chr5_+_26672873_26672878 0.42 AT5G66810.2
AT5G66810.1
AT5G66810.3
AT5G66810
Ran-binding protein in the microtubule-organising centre protein
arTal_v1_Chr3_+_17935256_17935256 0.42 AT3G48430.1
REF6
relative of early flowering 6
arTal_v1_Chr3_+_677240_677240 0.41 AT3G03000.1
AT3G03000
EF hand calcium-binding protein family
arTal_v1_Chr1_+_5578791_5578791 0.41 AT1G16310.2
AT1G16310
Cation efflux family protein
arTal_v1_Chr1_+_25325138_25325140 0.41 AT1G67570.1
AT1G67570.2
AT1G67570
zinc finger CONSTANS-like protein (DUF3537)
arTal_v1_Chr2_+_17012176_17012176 0.40 AT2G40765.1
AT2G40765
transmembrane protein
arTal_v1_Chr1_+_29665166_29665166 0.40 AT1G78910.2
AT1G78910.1
AT1G78910
Pseudouridine synthase family protein
arTal_v1_Chr5_+_3931349_3931484 0.40 AT5G12170.2
AT5G12170.3
CLT3
CRT (chloroquine-resistance transporter)-like transporter 3
arTal_v1_Chr3_-_4660945_4660945 0.39 AT3G14067.1
AT3G14067
Subtilase family protein
arTal_v1_Chr3_+_16871578_16871578 0.39 AT3G45890.1
RUS1
root UVB sensitive-like protein (Protein of unknown function, DUF647)
arTal_v1_Chr5_+_7524086_7524086 0.39 AT5G22630.1
ADT5
arogenate dehydratase 5
arTal_v1_Chr4_-_8305857_8305857 0.39 AT4G14430.1
IBR10
indole-3-butyric acid response 10
arTal_v1_Chr3_+_17558793_17558793 0.39 AT3G47620.1
TCP14
TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14
arTal_v1_Chr1_-_9733000_9733000 0.39 AT1G27930.1
AT1G27930
glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
arTal_v1_Chr3_+_4525033_4525033 0.39 AT3G13780.1
AT3G13780
SMAD/FHA domain-containing protein
arTal_v1_Chr1_-_1399053_1399122 0.39 AT1G04930.3
AT1G04930.2
AT1G04930.1
AT1G04930
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr3_+_270221_270229 0.39 AT3G01750.1
AT3G01750.2
AT3G01750
Ankyrin repeat family protein
arTal_v1_Chr5_+_8447378_8447497 0.38 AT5G24670.1
AT5G24670.3
EMB2820
Cytidine/deoxycytidylate deaminase family protein
arTal_v1_Chr1_-_23855658_23855658 0.38 AT1G64280.1
NPR1
regulatory protein (NPR1)
arTal_v1_Chr5_+_22261134_22261134 0.38 AT5G54800.1
GPT1
glucose 6-phosphate/phosphate translocator 1
arTal_v1_Chr4_-_4074735_4074735 0.38 AT4G06746.1
RAP2.9
related to AP2 9
arTal_v1_Chr2_+_12363426_12363456 0.37 AT2G28810.2
AT2G28810.1
AT2G28810
Dof-type zinc finger DNA-binding family protein
arTal_v1_Chr2_+_19625459_19625459 0.37 AT2G47960.1
AT2G47960
trafficking protein particle complex subunit-like protein
arTal_v1_Chr4_-_16853035_16853035 0.36 AT4G35480.1
RHA3B
RING-H2 finger A3B
arTal_v1_Chr3_+_6146015_6146058 0.36 AT3G17950.3
AT3G17950.1
AT3G17950.2
AT3G17950
transmembrane protein
arTal_v1_Chr3_+_9060836_9060836 0.35 AT3G24810.1
ICK3
Cyclin-dependent kinase inhibitor family protein
arTal_v1_Chr5_+_26673991_26673991 0.34 AT5G66810.4
AT5G66810
Ran-binding protein in the microtubule-organising centre protein
arTal_v1_Chr2_-_18556669_18556674 0.34 AT2G44980.2
AT2G44980.1
AT2G44980.3
ASG3
SNF2 domain-containing protein / helicase domain-containing protein
arTal_v1_Chr3_-_23301865_23301865 0.34 AT3G63060.1
EDL3
EID1-like 3
arTal_v1_Chr3_+_6273966_6273966 0.33 AT3G18290.1
BTS
zinc finger protein-like protein
arTal_v1_Chr5_-_1374787_1374787 0.33 AT5G04760.1
AT5G04760
Duplicated homeodomain-like superfamily protein
arTal_v1_Chr3_-_851741_851741 0.33 AT3G03550.1
AT3G03550
RING/U-box superfamily protein
arTal_v1_Chr2_+_9126263_9126263 0.33 AT2G21320.1
BBX18
B-box zinc finger family protein
arTal_v1_Chr5_-_25155983_25155983 0.32 AT5G62650.1
AT5G62650
Tic22-like family protein
arTal_v1_Chr3_-_10132759_10132882 0.32 AT3G27380.2
AT3G27380.1
SDH2-1
succinate dehydrogenase 2-1
arTal_v1_Chr3_+_2413623_2413642 0.32 AT3G07565.1
AT3G07565.3
AT3G07565.4
AT3G07565.2
AT3G07565
histone H2A deubiquitinase (DUF3755)
arTal_v1_Chr5_+_7207166_7207166 0.32 AT5G21170.3
AKINBETA1
5'-AMP-activated protein kinase beta-2 subunit protein
arTal_v1_Chr1_-_23101335_23101335 0.32 AT1G62422.1
AT1G62422
hypothetical protein
arTal_v1_Chr5_+_26799738_26799766 0.31 AT5G67170.3
AT5G67170.2
AT5G67170.1
AT5G67170
SEC-C motif-containing protein / OTU-like cysteine protease family protein
arTal_v1_Chr3_-_15885380_15885380 0.31 AT3G44140.1
AT3G44140
transmembrane protein
arTal_v1_Chr5_+_22341750_22341750 0.31 AT5G55060.2
AT5G55060.1
AT5G55060
Rab3 GTPase-activating protein catalytic subunit
arTal_v1_Chr1_+_1207344_1207344 0.31 AT1G04445.1
AT1G04445
C2H2-like zinc finger protein
arTal_v1_Chr2_-_18907973_18908121 0.31 AT2G45950.2
AT2G45950.1
AT2G45950.3
SK20
SKP1-like 20
arTal_v1_Chr5_+_20255173_20255191 0.30 AT5G49840.3
AT5G49840.2
AT5G49840.4
AT5G49840.1
AT5G49840
ATP-dependent Clp protease
arTal_v1_Chr4_+_578028_578028 0.30 AT4G01410.1
AT4G01410
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
arTal_v1_Chr5_+_21958059_21958076 0.30 AT5G54110.1
AT5G54110.2
MAMI
membrane-associated mannitol-induced
arTal_v1_Chr5_-_8982873_8982891 0.30 AT5G25800.2
AT5G25800.1
AT5G25800
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
arTal_v1_Chr5_+_4441858_4441858 0.30 AT5G13760.1
AT5G13760
Plasma-membrane choline transporter family protein
arTal_v1_Chr2_+_2055519_2055519 0.30 AT2G05580.1
AT2G05580
Glycine-rich protein family
arTal_v1_Chr3_-_16002163_16002163 0.30 AT3G44326.1
AT3G44326
F-box family protein
arTal_v1_Chr5_+_7205477_7205477 0.29 AT5G21170.1
AKINBETA1
5'-AMP-activated protein kinase beta-2 subunit protein
arTal_v1_Chr4_+_18315545_18315605 0.29 AT4G39390.2
AT4G39390.1
AT4G39390.3
NST-K1
nucleotide sugar transporter-KT 1
arTal_v1_Chr5_+_7205667_7205667 0.29 AT5G21170.2
AKINBETA1
5'-AMP-activated protein kinase beta-2 subunit protein
arTal_v1_Chr5_+_8735944_8736074 0.29 AT5G25220.1
AT5G25220.2
KNAT3
homeobox protein knotted-1-like 3
arTal_v1_Chr2_-_16740486_16740486 0.28 AT2G40090.1
ATH9
ABC2 homolog 9
arTal_v1_Chr4_+_13611796_13611796 0.28 AT4G27160.1
SESA3
seed storage albumin 3
arTal_v1_Chr1_-_28616785_28616785 0.28 AT1G76270.1
AT1G76270
O-fucosyltransferase family protein
arTal_v1_Chr2_-_16038972_16038972 0.26 AT2G38280.2
AT2G38280.1
FAC1
AMP deaminase, putative / myoadenylate deaminase
arTal_v1_Chr2_+_14746236_14746236 0.26 AT2G34970.1
AT2G34970
Trimeric LpxA-like enzyme
arTal_v1_Chr1_-_342040_342040 0.26 AT1G01980.1
AT1G01980
FAD-binding Berberine family protein
arTal_v1_Chr3_+_3232608_3232608 0.25 AT3G10400.1
U11/U12-31K
RNA recognition motif and CCHC-type zinc finger domains containing protein
arTal_v1_Chr1_+_26814260_26814260 0.25 AT1G71100.1
RSW10
Ribose 5-phosphate isomerase, type A protein
arTal_v1_Chr3_+_5121303_5121303 0.25 AT3G15210.1
ERF4
ethylene responsive element binding factor 4
arTal_v1_Chr1_-_22595338_22595338 0.25 AT1G61260.1
AT1G61260
cotton fiber (DUF761)
arTal_v1_Chr4_-_16282048_16282048 0.25 AT4G33970.1
AT4G33970
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr1_+_26626528_26626634 0.24 AT1G70620.5
AT1G70620.6
AT1G70620.4
AT1G70620.3
AT1G70620.8
AT1G70620.7
AT1G70620.1
AT1G70620.2
AT1G70620.9
AT1G70620
cyclin-like protein
arTal_v1_Chr4_+_16402129_16402265 0.24 AT4G34265.1
AT4G34265.4
AT4G34265.3
AT4G34265.2
AT4G34265.5
AT4G34265.6
AT4G34265
hypothetical protein
arTal_v1_Chr1_-_17976663_17976663 0.24 AT1G48620.1
HON5
high mobility group A5
arTal_v1_Chr3_+_2622849_2622849 0.24 AT3G08640.1
AT3G08640
alphavirus core family protein (DUF3411)
arTal_v1_Chr1_+_17424473_17424473 0.24 AT1G47490.2
AT1G47490.1
RBP47C
RNA-binding protein 47C
arTal_v1_Chr4_-_16758358_16758358 0.24 AT4G35230.1
BSK1
BR-signaling kinase 1
arTal_v1_Chr2_-_18907477_18907477 0.23 AT2G45950.4
AT2G45950.5
SK20
SKP1-like 20

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G18450

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.8 GO:0015692 lead ion transport(GO:0015692) abscisic acid transport(GO:0080168)
0.4 1.1 GO:0010288 response to lead ion(GO:0010288)
0.3 1.2 GO:0010618 response to trehalose(GO:0010353) aerenchyma formation(GO:0010618) positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.2 0.9 GO:0010507 negative regulation of autophagy(GO:0010507)
0.2 0.6 GO:0015696 ammonium transport(GO:0015696)
0.2 1.0 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.2 0.6 GO:0006369 termination of RNA polymerase II transcription(GO:0006369)
0.2 0.5 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.1 0.9 GO:0060866 leaf abscission(GO:0060866)
0.1 1.2 GO:0006121 mitochondrial electron transport, succinate to ubiquinone(GO:0006121)
0.1 0.4 GO:0015717 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.1 1.0 GO:0009061 anaerobic respiration(GO:0009061)
0.1 0.3 GO:0071763 nuclear membrane organization(GO:0071763)
0.1 1.4 GO:0015914 phospholipid transport(GO:0015914)
0.1 1.5 GO:0048317 seed morphogenesis(GO:0048317)
0.1 0.3 GO:0010481 epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482)
0.1 0.7 GO:1990169 detoxification of copper ion(GO:0010273) stress response to copper ion(GO:1990169)
0.1 0.9 GO:2000757 histone H3-K9 demethylation(GO:0033169) negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757)
0.1 1.1 GO:0010264 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.1 2.3 GO:0031540 regulation of anthocyanin biosynthetic process(GO:0031540)
0.1 0.4 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.1 0.4 GO:0042939 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.1 0.8 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.1 0.9 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.1 1.4 GO:0015996 chlorophyll catabolic process(GO:0015996)
0.1 1.2 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.1 0.7 GO:0042659 regulation of cell fate specification(GO:0042659)
0.1 0.4 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
0.1 0.2 GO:0035247 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.1 0.2 GO:0072337 modified amino acid transport(GO:0072337)
0.1 1.3 GO:0019374 galactolipid metabolic process(GO:0019374)
0.1 2.7 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.1 0.3 GO:0032877 positive regulation of DNA endoreduplication(GO:0032877) positive regulation of DNA-dependent DNA replication(GO:2000105)
0.1 1.5 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.1 1.7 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.1 0.8 GO:0006574 valine catabolic process(GO:0006574)
0.0 0.3 GO:0072334 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.0 1.2 GO:0052482 defense response by cell wall thickening(GO:0052482)
0.0 0.9 GO:0051177 meiotic sister chromatid segregation(GO:0045144) meiotic sister chromatid cohesion(GO:0051177)
0.0 0.3 GO:0009720 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.0 0.7 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.0 0.5 GO:0007155 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.0 0.1 GO:0010433 nectary development(GO:0010254) bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.0 0.3 GO:0048871 multicellular organismal homeostasis(GO:0048871)
0.0 0.3 GO:0070370 cellular heat acclimation(GO:0070370)
0.0 0.5 GO:0031053 primary miRNA processing(GO:0031053)
0.0 0.4 GO:0016584 nucleosome positioning(GO:0016584)
0.0 0.2 GO:0009972 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.0 0.3 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.0 0.3 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.0 0.1 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 0.1 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.0 0.6 GO:1905177 tracheary element differentiation(GO:1905177)
0.0 0.8 GO:0051781 positive regulation of cell division(GO:0051781)
0.0 0.6 GO:0030968 endoplasmic reticulum unfolded protein response(GO:0030968)
0.0 0.3 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.0 0.2 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.0 1.3 GO:0009626 plant-type hypersensitive response(GO:0009626)
0.0 0.6 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.0 0.9 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.0 0.3 GO:0060688 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.0 0.2 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.3 GO:0006188 IMP biosynthetic process(GO:0006188) purine nucleotide salvage(GO:0032261) purine-containing compound salvage(GO:0043101)
0.0 0.4 GO:0010193 response to ozone(GO:0010193)
0.0 0.2 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.0 0.6 GO:0006368 transcription elongation from RNA polymerase II promoter(GO:0006368)
0.0 0.5 GO:0043547 positive regulation of GTPase activity(GO:0043547)
0.0 0.9 GO:0034605 cellular response to heat(GO:0034605)
0.0 0.4 GO:0010229 inflorescence development(GO:0010229)
0.0 0.1 GO:0016577 protein demethylation(GO:0006482) protein dealkylation(GO:0008214) histone demethylation(GO:0016577) histone lysine demethylation(GO:0070076)
0.0 0.8 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.0 0.5 GO:0009251 glucan catabolic process(GO:0009251)
0.0 1.8 GO:0009408 response to heat(GO:0009408)
0.0 0.3 GO:0043044 ATP-dependent chromatin remodeling(GO:0043044)
0.0 0.1 GO:0042732 D-xylose metabolic process(GO:0042732)
0.0 0.4 GO:0043269 regulation of ion transport(GO:0043269)
0.0 2.2 GO:0050832 defense response to fungus(GO:0050832)
0.0 0.3 GO:0031348 negative regulation of defense response(GO:0031348)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.1 GO:0009514 glyoxysome(GO:0009514)
0.2 0.9 GO:0038201 TORC1 complex(GO:0031931) TOR complex(GO:0038201)
0.1 0.9 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.1 1.2 GO:0045281 respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281)
0.1 0.6 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.1 0.8 GO:0005844 polysome(GO:0005844)
0.1 0.4 GO:0017053 transcriptional repressor complex(GO:0017053)
0.1 0.6 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 0.6 GO:0016514 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.1 0.5 GO:0010445 nuclear dicing body(GO:0010445)
0.0 0.6 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.0 0.9 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 0.9 GO:0035097 histone methyltransferase complex(GO:0035097)
0.0 0.9 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 0.3 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.0 0.2 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.0 0.4 GO:0005750 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.0 1.3 GO:0009706 chloroplast inner membrane(GO:0009706)
0.0 1.5 GO:0098687 chromosomal region(GO:0098687)
0.0 0.4 GO:0072686 mitotic spindle(GO:0072686)
0.0 0.6 GO:0005686 U2 snRNP(GO:0005686)
0.0 0.1 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.0 0.3 GO:0034399 nuclear periphery(GO:0034399)
0.0 0.6 GO:0000145 exocyst(GO:0000145)
0.0 0.3 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.0 0.4 GO:0031306 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.2 GO:0000786 nucleosome(GO:0000786)
0.0 0.2 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.0 0.7 GO:0016592 mediator complex(GO:0016592)
0.0 0.3 GO:0032592 integral component of mitochondrial membrane(GO:0032592)
0.0 1.4 GO:0042025 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 2.1 GO:0099503 secretory vesicle(GO:0099503)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.5 GO:0003680 AT DNA binding(GO:0003680)
0.3 0.9 GO:0008909 isochorismate synthase activity(GO:0008909)
0.3 0.8 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
0.3 1.1 GO:0032791 lead ion binding(GO:0032791)
0.3 1.3 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.2 0.9 GO:1901982 disaccharide binding(GO:0048030) maltose binding(GO:1901982)
0.2 0.9 GO:0004000 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.2 0.6 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.2 1.0 GO:0035197 siRNA binding(GO:0035197)
0.2 1.2 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.1 0.7 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.1 0.4 GO:0015152 hexose phosphate transmembrane transporter activity(GO:0015119) glucose-6-phosphate transmembrane transporter activity(GO:0015152)
0.1 1.3 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.1 0.6 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.1 0.7 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
0.1 1.2 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.1 0.9 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.1 0.6 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.1 1.2 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.1 0.4 GO:0004165 dodecenoyl-CoA delta-isomerase activity(GO:0004165)
0.1 0.2 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.1 0.2 GO:0008517 folic acid transporter activity(GO:0008517)
0.1 0.9 GO:0030674 protein binding, bridging(GO:0030674)
0.1 0.4 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 0.3 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.1 0.8 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.1 0.2 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.1 1.7 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.0 0.2 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.0 0.3 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.0 0.3 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.0 0.1 GO:0001056 RNA polymerase I activity(GO:0001054) RNA polymerase III activity(GO:0001056)
0.0 0.1 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.0 0.3 GO:0030291 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.0 0.5 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044)
0.0 0.5 GO:0019239 deaminase activity(GO:0019239)
0.0 0.2 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.0 0.8 GO:0008143 poly(A) binding(GO:0008143)
0.0 1.0 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.0 0.1 GO:0016040 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.0 0.5 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.1 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.0 0.4 GO:0031369 translation initiation factor binding(GO:0031369)
0.0 0.4 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 1.5 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 1.6 GO:0019901 protein kinase binding(GO:0019901)
0.0 0.9 GO:0008171 O-methyltransferase activity(GO:0008171)
0.0 0.3 GO:0031491 nucleosome binding(GO:0031491)
0.0 0.9 GO:0019888 protein phosphatase regulator activity(GO:0019888)
0.0 0.9 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.0 1.7 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 0.5 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.1 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.0 1.6 GO:0061630 ubiquitin protein ligase activity(GO:0061630)