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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT4G29230

Z-value: 1.30

Transcription factors associated with AT4G29230

Gene Symbol Gene ID Gene Info
AT4G29230
AT4G29230 NAC domain containing protein 75

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
NAC075arTal_v1_Chr4_+_14409772_14409871-0.771.7e-06Click!

Activity profile of AT4G29230 motif

Sorted Z-values of AT4G29230 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr5_+_9072708_9072727 8.07 AT5G25980.2
AT5G25980.1
AT5G25980.3
TGG2
glucoside glucohydrolase 2
arTal_v1_Chr2_+_14524607_14524607 7.35 AT2G34430.1
LHB1B1
light-harvesting chlorophyll-protein complex II subunit B1
arTal_v1_Chr1_+_3157501_3157501 6.38 AT1G09750.1
AT1G09750
Eukaryotic aspartyl protease family protein
arTal_v1_Chr5_-_9082384_9082384 6.23 AT5G26000.1
AT5G26000.2
TGG1
thioglucoside glucohydrolase 1
arTal_v1_Chr3_+_5556710_5556710 5.78 AT3G16370.1
AT3G16370
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr4_+_18291218_18291218 5.53 AT4G39330.1
AT4G39330.2
CAD9
cinnamyl alcohol dehydrogenase 9
arTal_v1_Chr5_+_4757856_4757972 5.53 AT5G14740.3
AT5G14740.6
AT5G14740.1
AT5G14740.7
AT5G14740.8
AT5G14740.2
AT5G14740.4
AT5G14740.5
CA2
carbonic anhydrase 2
arTal_v1_Chr3_+_17228642_17228642 5.12 AT3G46780.1
PTAC16
plastid transcriptionally active 16
arTal_v1_Chr5_-_6222300_6222300 5.11 AT5G18660.1
PCB2
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr5_+_4758921_4758921 4.93 AT5G14740.9
CA2
carbonic anhydrase 2
arTal_v1_Chr1_+_10371675_10371675 4.90 AT1G29660.1
AT1G29660
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr1_-_10473502_10473502 4.90 AT1G29910.1
CAB3
chlorophyll A/B binding protein 3
arTal_v1_Chr5_+_2578211_2578211 4.77 AT5G08050.1
AT5G08050
wiskott-aldrich syndrome family protein, putative (DUF1118)
arTal_v1_Chr3_-_9492655_9492655 4.73 AT3G25920.1
RPL15
ribosomal protein L15
arTal_v1_Chr4_-_10391298_10391298 4.73 AT4G18970.1
AT4G18970
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr4_-_10390991_10390991 4.69 AT4G18970.2
AT4G18970
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr1_-_59215_59215 4.67 AT1G01120.1
KCS1
3-ketoacyl-CoA synthase 1
arTal_v1_Chr5_+_22038165_22038165 4.54 AT5G54270.1
LHCB3
light-harvesting chlorophyll B-binding protein 3
arTal_v1_Chr4_+_12660687_12660687 4.40 AT4G24510.1
CER2
HXXXD-type acyl-transferase family protein
arTal_v1_Chr3_+_23345754_23345754 4.32 AT3G63200.1
PLP9
PATATIN-like protein 9
arTal_v1_Chr2_-_12433796_12433796 4.27 AT2G28950.1
EXPA6
expansin A6
arTal_v1_Chr1_-_11740399_11740399 4.08 AT1G32470.1
AT1G32470
Single hybrid motif superfamily protein
arTal_v1_Chr3_+_251868_251868 4.04 AT3G01680.1
SEOR1
sieve element occlusion amino-terminus protein
arTal_v1_Chr1_+_17918207_17918207 3.97 AT1G48480.1
RKL1
receptor-like kinase 1
arTal_v1_Chr5_+_21020014_21020014 3.94 AT5G51750.1
SBT1.3
subtilase 1.3
arTal_v1_Chr5_-_1293723_1293723 3.92 AT5G04530.1
KCS19
3-ketoacyl-CoA synthase 19
arTal_v1_Chr1_+_898480_898480 3.89 AT1G03600.1
PSB27
photosystem II family protein
arTal_v1_Chr4_+_13725546_13725546 3.88 AT4G27440.2
AT4G27440.1
PORB
protochlorophyllide oxidoreductase B
arTal_v1_Chr4_+_6408007_6408007 3.78 AT4G10340.1
LHCB5
light harvesting complex of photosystem II 5
arTal_v1_Chr1_+_10477885_10477885 3.70 AT1G29930.1
CAB1
chlorophyll A/B binding protein 1
arTal_v1_Chr4_+_620691_620697 3.68 AT4G01460.1
AT4G01460.2
AT4G01460
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr4_+_11202728_11202728 3.67 AT4G20940.1
GHR1
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr2_+_9636346_9636492 3.64 AT2G22670.1
AT2G22670.4
AT2G22670.2
AT2G22670.5
AT2G22670.3
IAA8
indoleacetic acid-induced protein 8
arTal_v1_Chr2_+_1676999_1676999 3.63 AT2G04780.2
FLA7
FASCICLIN-like arabinoogalactan 7
arTal_v1_Chr5_+_2680401_2680401 3.57 AT5G08330.1
TCP11
TCP family transcription factor
arTal_v1_Chr4_+_493546_493548 3.56 AT4G01150.1
AT4G01150.2
AT4G01150
CURVATURE THYLAKOID 1A-like protein
arTal_v1_Chr2_+_1676717_1676717 3.53 AT2G04780.1
FLA7
FASCICLIN-like arabinoogalactan 7
arTal_v1_Chr3_+_6180621_6180621 3.51 AT3G18050.1
AT3G18050
GPI-anchored protein
arTal_v1_Chr1_+_27452748_27452766 3.49 AT1G72970.1
AT1G72970.2
HTH
Glucose-methanol-choline (GMC) oxidoreductase family protein
arTal_v1_Chr3_-_20903080_20903080 3.49 AT3G56370.1
AT3G56370
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr5_-_17581275_17581275 3.48 AT5G43750.1
PnsB5
NAD(P)H dehydrogenase 18
arTal_v1_Chr5_-_8338032_8338032 3.39 AT5G24420.1
PGL5
6-phosphogluconolactonase 5
arTal_v1_Chr5_-_6842946_6842946 3.38 AT5G20270.1
HHP1
heptahelical transmembrane protein1
arTal_v1_Chr2_+_19191247_19191247 3.38 AT2G46710.1
ROPGAP3
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
arTal_v1_Chr5_-_20712386_20712473 3.35 AT5G50915.4
AT5G50915.2
AT5G50915.1
AT5G50915.3
AT5G50915
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr4_-_18165740_18165740 3.34 AT4G38970.2
FBA2
fructose-bisphosphate aldolase 2
arTal_v1_Chr1_-_30041952_30041952 3.34 AT1G79850.1
RPS17
ribosomal protein S17
arTal_v1_Chr5_-_671687_671687 3.34 AT5G02890.1
AT5G02890
HXXXD-type acyl-transferase family protein
arTal_v1_Chr4_-_18166008_18166008 3.33 AT4G38970.1
FBA2
fructose-bisphosphate aldolase 2
arTal_v1_Chr5_+_2803833_2803957 3.29 AT5G08640.1
AT5G08640.2
FLS1
flavonol synthase 1
arTal_v1_Chr4_-_13398307_13398307 3.29 AT4G26540.1
AT4G26540
Leucine-rich repeat receptor-like protein kinase family protein
arTal_v1_Chr4_-_7353117_7353135 3.27 AT4G12420.1
AT4G12420.2
SKU5
Cupredoxin superfamily protein
arTal_v1_Chr4_-_10203469_10203469 3.21 AT4G18480.1
CHLI1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr2_+_18286321_18286321 3.20 AT2G44230.1
AT2G44230
hypothetical protein (DUF946)
arTal_v1_Chr3_-_23165387_23165387 3.19 AT3G62630.1
AT3G62630
stress response NST1-like protein (DUF1645)
arTal_v1_Chr5_+_18945543_18945543 3.16 AT5G46690.2
AT5G46690.1
bHLH071
beta HLH protein 71
arTal_v1_Chr1_+_1231452_1231452 3.15 AT1G04520.1
PDLP2
plasmodesmata-located protein 2
arTal_v1_Chr5_+_19825078_19825078 3.11 AT5G48900.1
AT5G48900
Pectin lyase-like superfamily protein
arTal_v1_Chr2_+_6542166_6542166 3.09 AT2G15090.1
KCS8
3-ketoacyl-CoA synthase 8
arTal_v1_Chr2_-_7727404_7727503 3.08 AT2G17780.2
AT2G17780.4
AT2G17780.5
AT2G17780.8
AT2G17780.10
AT2G17780.9
AT2G17780.1
AT2G17780.6
AT2G17780.3
AT2G17780.7
MCA2
PLAC8 family protein
arTal_v1_Chr3_-_6436046_6436046 3.08 AT3G18710.1
PUB29
plant U-box 29
arTal_v1_Chr5_+_4974671_4974671 3.08 AT5G15310.2
AT5G15310.4
AT5G15310.3
AT5G15310.1
MYB16
myb domain protein 16
arTal_v1_Chr1_+_23911024_23911024 3.07 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
arTal_v1_Chr5_+_1952505_1952505 3.06 AT5G06390.1
FLA17
FASCICLIN-like arabinogalactan protein 17 precursor
arTal_v1_Chr1_-_6940832_6940832 3.04 AT1G20010.1
TUB5
tubulin beta-5 chain
arTal_v1_Chr1_+_2047886_2047886 3.03 AT1G06680.2
PSBP-1
photosystem II subunit P-1
arTal_v1_Chr1_+_2047634_2047634 3.03 AT1G06680.1
PSBP-1
photosystem II subunit P-1
arTal_v1_Chr3_-_18559326_18559326 3.02 AT3G50060.1
MYB77
myb domain protein 77
arTal_v1_Chr3_-_18628888_18628914 2.98 AT3G50240.3
AT3G50240.2
AT3G50240.4
AT3G50240.1
KICP-02
ATP binding microtubule motor family protein
arTal_v1_Chr2_+_1033598_1033598 2.95 AT2G03410.1
AT2G03410
Mo25 family protein
arTal_v1_Chr5_-_5966785_5966785 2.95 AT5G18020.1
SAUR20
SAUR-like auxin-responsive protein family
arTal_v1_Chr4_-_1114151_1114158 2.95 AT4G02530.1
AT4G02530.2
AT4G02530.3
AT4G02530
chloroplast thylakoid lumen protein
arTal_v1_Chr4_+_11663186_11663186 2.94 AT4G22010.1
sks4
SKU5 similar 4
arTal_v1_Chr1_+_24149208_24149208 2.93 AT1G65010.1
AT1G65010
WEB family protein (DUF827)
arTal_v1_Chr1_-_1063809_1063809 2.91 AT1G04110.1
SDD1
Subtilase family protein
arTal_v1_Chr5_-_2182538_2182538 2.90 AT5G07020.1
AT5G07020
proline-rich family protein
arTal_v1_Chr4_+_14677661_14677695 2.90 AT4G30020.2
AT4G30020.3
AT4G30020
PA-domain containing subtilase family protein
arTal_v1_Chr3_-_7187521_7187521 2.89 AT3G20570.1
ENODL9
early nodulin-like protein 9
arTal_v1_Chr5_+_6387341_6387489 2.86 AT5G19090.1
AT5G19090.4
AT5G19090.3
AT5G19090.2
AT5G19090
Heavy metal transport/detoxification superfamily protein
arTal_v1_Chr3_+_20709294_20709294 2.84 AT3G55800.1
SBPASE
sedoheptulose-bisphosphatase
arTal_v1_Chr3_+_6752422_6752422 2.84 AT3G19480.1
AT3G19480
D-3-phosphoglycerate dehydrogenase
arTal_v1_Chr2_+_15980848_15980848 2.84 AT2G38140.1
PSRP4
plastid-specific ribosomal protein 4
arTal_v1_Chr4_-_18160158_18160158 2.83 AT4G38950.2
AT4G38950.1
AT4G38950.3
AT4G38950
ATP binding microtubule motor family protein
arTal_v1_Chr1_-_24023424_24023424 2.83 AT1G64640.1
ENODL8
early nodulin-like protein 8
arTal_v1_Chr5_-_1726932_1727068 2.82 AT5G05740.1
AT5G05740.3
AT5G05740.2
EGY2
ethylene-dependent gravitropism-deficient and yellow-green-like 2
arTal_v1_Chr4_-_947075_947085 2.82 AT4G02130.2
AT4G02130.3
GATL6
galacturonosyltransferase 6
arTal_v1_Chr1_-_1702749_1702749 2.79 AT1G05675.1
AT1G05675
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr3_+_19713799_19713799 2.77 AT3G53190.1
AT3G53190
Pectin lyase-like superfamily protein
arTal_v1_Chr1_+_24647121_24647121 2.77 AT1G66180.1
AT1G66180
Eukaryotic aspartyl protease family protein
arTal_v1_Chr5_-_18588792_18588792 2.76 AT5G45820.1
CIPK20
CBL-interacting protein kinase 20
arTal_v1_Chr4_-_2352025_2352025 2.75 AT4G04640.1
ATPC1
ATPase, F1 complex, gamma subunit protein
arTal_v1_Chr2_+_10662190_10662190 2.74 AT2G25060.1
ENODL14
early nodulin-like protein 14
arTal_v1_Chr1_+_23144385_23144385 2.72 AT1G62520.1
AT1G62520
sulfated surface-like glycoprotein
arTal_v1_Chr4_-_14439723_14439769 2.70 AT4G29310.1
AT4G29310.2
AT4G29310
DUF1005 family protein (DUF1005)
arTal_v1_Chr2_-_14523568_14523568 2.69 AT2G34420.1
LHB1B2
photosystem II light harvesting complex protein B1B2
arTal_v1_Chr5_+_23400715_23400715 2.68 AT5G57760.1
AT5G57760
hypothetical protein
arTal_v1_Chr1_-_3518035_3518035 2.67 AT1G10640.1
AT1G10640
Pectin lyase-like superfamily protein
arTal_v1_Chr1_-_24033600_24033674 2.65 AT1G64670.1
AT1G64670.3
AT1G64670.2
BDG1
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr4_-_18158873_18158873 2.65 AT4G38950.4
AT4G38950.5
AT4G38950
ATP binding microtubule motor family protein
arTal_v1_Chr4_-_10304612_10304624 2.65 AT4G18740.3
AT4G18740.4
AT4G18740.1
AT4G18740.2
AT4G18740
Rho termination factor
arTal_v1_Chr3_+_10505711_10505711 2.62 AT3G28180.1
CSLC04
Cellulose-synthase-like C4
arTal_v1_Chr3_-_10877578_10877578 2.59 AT3G28860.1
ABCB19
ATP binding cassette subfamily B19
arTal_v1_Chr4_-_947249_947249 2.58 AT4G02130.1
GATL6
galacturonosyltransferase 6
arTal_v1_Chr5_+_25727126_25727268 2.57 AT5G64330.1
AT5G64330.2
AT5G64330.3
NPH3
Phototropic-responsive NPH3 family protein
arTal_v1_Chr3_+_2612175_2612175 2.57 AT3G08600.1
AT3G08600
transmembrane protein, putative (DUF1191)
arTal_v1_Chr3_-_9255083_9255083 2.56 AT3G25500.1
AFH1
formin homology 1
arTal_v1_Chr2_+_11856571_11856571 2.56 AT2G27820.1
PD1
prephenate dehydratase 1
arTal_v1_Chr1_-_11539896_11539896 2.56 AT1G32080.1
LrgB
membrane protein
arTal_v1_Chr4_+_14678096_14678096 2.56 AT4G30020.4
AT4G30020
PA-domain containing subtilase family protein
arTal_v1_Chr2_-_18914739_18914739 2.55 AT2G45970.1
CYP86A8
cytochrome P450, family 86, subfamily A, polypeptide 8
arTal_v1_Chr5_+_18894378_18894378 2.54 AT5G46570.1
BSK2
BR-signaling kinase 2
arTal_v1_Chr4_+_12376122_12376194 2.53 AT4G23750.1
AT4G23750.2
CRF2
cytokinin response factor 2
arTal_v1_Chr1_+_5602786_5602786 2.53 AT1G16390.1
OCT3
organic cation/carnitine transporter 3
arTal_v1_Chr5_-_13959830_13959830 2.53 AT5G35790.1
G6PD1
glucose-6-phosphate dehydrogenase 1
arTal_v1_Chr4_-_17486358_17486400 2.52 AT4G37110.4
AT4G37110.3
AT4G37110.1
AT4G37110.2
AT4G37110
Zinc-finger domain of monoamine-oxidase A repressor R1
arTal_v1_Chr1_+_26439556_26439556 2.51 AT1G70210.1
CYCD1%3B1
CYCLIN D1;1
arTal_v1_Chr4_-_18510555_18510555 2.51 AT4G39900.1
AT4G39900
adenine deaminase
arTal_v1_Chr1_+_12188678_12188678 2.51 AT1G33610.1
AT1G33610
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr4_-_14827211_14827211 2.50 AT4G30280.1
XTH18
xyloglucan endotransglucosylase/hydrolase 18
arTal_v1_Chr1_+_19879405_19879405 2.49 AT1G53300.1
TTL1
tetratricopetide-repeat thioredoxin-like 1
arTal_v1_Chr5_-_20779464_20779488 2.49 AT5G51110.2
AT5G51110.1
AT5G51110
Transcriptional coactivator/pterin dehydratase
arTal_v1_Chr1_-_4807517_4807517 2.48 AT1G14030.1
LSMT-L
Rubisco methyltransferase family protein
arTal_v1_Chr4_+_14192569_14192569 2.47 AT4G28720.1
YUC8
Flavin-binding monooxygenase family protein
arTal_v1_Chr4_+_10949573_10949573 2.47 AT4G20270.1
BAM3
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr2_+_12589866_12590058 2.47 AT2G29310.3
AT2G29310.1
AT2G29310.2
AT2G29310.4
AT2G29310
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr4_-_9754161_9754161 2.46 AT4G17490.1
ERF6
ethylene responsive element binding factor 6
arTal_v1_Chr2_+_15906555_15906645 2.45 AT2G38010.2
AT2G38010.3
AT2G38010
Neutral/alkaline non-lysosomal ceramidase
arTal_v1_Chr5_-_24326827_24326827 2.45 AT5G60490.1
FLA12
FASCICLIN-like arabinogalactan-protein 12
arTal_v1_Chr2_-_1861934_1862064 2.43 AT2G05160.3
AT2G05160.1
AT2G05160.2
AT2G05160
CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein
arTal_v1_Chr5_+_26061165_26061165 2.42 AT5G65220.1
AT5G65220
Ribosomal L29 family protein
arTal_v1_Chr5_-_5833989_5834000 2.41 AT5G17700.2
AT5G17700.1
AT5G17700.3
AT5G17700
MATE efflux family protein
arTal_v1_Chr3_+_18514266_18514266 2.40 AT3G49940.1
LBD38
LOB domain-containing protein 38
arTal_v1_Chr2_+_9219252_9219252 2.40 AT2G21530.1
AT2G21530
SMAD/FHA domain-containing protein
arTal_v1_Chr1_-_21418115_21418115 2.40 AT1G57820.1
AT1G57820.3
VIM1
Zinc finger (C3HC4-type RING finger) family protein
arTal_v1_Chr4_+_14677141_14677141 2.40 AT4G30020.1
AT4G30020
PA-domain containing subtilase family protein
arTal_v1_Chr2_+_11852078_11852080 2.40 AT2G27810.1
AT2G27810.3
AT2G27810.2
AT2G27810.4
NAT12
nucleobase-ascorbate transporter 12
arTal_v1_Chr1_+_26705420_26705428 2.38 AT1G70820.1
AT1G70820.2
AT1G70820
phosphoglucomutase, putative / glucose phosphomutase
arTal_v1_Chr5_+_20900859_20900860 2.38 AT5G51460.1
AT5G51460.4
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr5_-_3356656_3356686 2.38 AT5G10620.2
AT5G10620.1
AT5G10620
methyltransferase
arTal_v1_Chr2_+_15906862_15906862 2.35 AT2G38010.1
AT2G38010
Neutral/alkaline non-lysosomal ceramidase
arTal_v1_Chr5_+_24667873_24667873 2.35 AT5G61350.1
AT5G61350
Protein kinase superfamily protein
arTal_v1_Chr5_-_26845294_26845294 2.35 AT5G67280.1
RLK
receptor-like kinase
arTal_v1_Chr1_+_5878390_5878390 2.34 AT1G17200.1
AT1G17200
Uncharacterized protein family (UPF0497)
arTal_v1_Chr2_-_18443405_18443405 2.34 AT2G44740.1
CYCP4%3B1
cyclin p4;1
arTal_v1_Chr3_+_3012094_3012094 2.33 AT3G09820.2
ADK1
adenosine kinase 1
arTal_v1_Chr5_+_463073_463073 2.33 AT5G02260.1
EXPA9
expansin A9
arTal_v1_Chr2_+_16049918_16049918 2.31 AT2G38310.1
PYL4
PYR1-like 4
arTal_v1_Chr4_-_13777437_13777458 2.31 AT4G27595.2
AT4G27595.1
AT4G27595
WEB family protein (DUF827)
arTal_v1_Chr3_+_3011780_3011780 2.30 AT3G09820.1
ADK1
adenosine kinase 1
arTal_v1_Chr3_-_9981620_9981620 2.29 AT3G27060.1
TSO2
Ferritin/ribonucleotide reductase-like family protein
arTal_v1_Chr5_+_20902087_20902087 2.28 AT5G51460.2
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr2_-_444324_444324 2.27 AT2G01950.1
BRL2
BRI1-like 2
arTal_v1_Chr1_-_28722550_28722550 2.27 AT1G76540.1
CDKB2%3B1
cyclin-dependent kinase B2;1
arTal_v1_Chr5_+_26671273_26671273 2.26 AT5G66800.1
AT5G66800
membrane-associated kinase regulator-like protein
arTal_v1_Chr3_+_7812861_7812876 2.25 AT3G22150.2
AT3G22150.1
AT3G22150
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr4_+_16394600_16394600 2.25 AT4G34250.1
KCS16
3-ketoacyl-CoA synthase 16
arTal_v1_Chr1_+_28327698_28327698 2.24 AT1G75460.1
AT1G75460
ATP-dependent protease La (LON) domain protein
arTal_v1_Chr2_+_12000239_12000388 2.23 AT2G28150.2
AT2G28150.3
AT2G28150
UPSTREAM OF FLC protein (DUF966)
arTal_v1_Chr4_+_10148951_10149031 2.23 AT4G18370.1
AT4G18370.2
AT4G18370.3
DEG5
DEGP protease 5
arTal_v1_Chr5_+_25243405_25243417 2.23 AT5G62890.3
AT5G62890.1
AT5G62890
Xanthine/uracil permease family protein
arTal_v1_Chr5_+_6138717_6138717 2.23 AT5G18500.3
AT5G18500.4
AT5G18500.5
AT5G18500
Protein kinase superfamily protein
arTal_v1_Chr5_+_20901835_20901835 2.22 AT5G51460.5
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr5_-_23230749_23230749 2.22 AT5G57345.1
AT5G57345
transmembrane protein
arTal_v1_Chr2_+_15934244_15934244 2.21 AT2G38080.1
IRX12
Laccase/Diphenol oxidase family protein
arTal_v1_Chr5_+_2446669_2446669 2.20 AT5G07690.1
MYB29
myb domain protein 29
arTal_v1_Chr5_+_20901537_20901537 2.19 AT5G51460.3
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr5_-_8412240_8412265 2.18 AT5G24580.3
AT5G24580.2
AT5G24580
Heavy metal transport/detoxification superfamily protein
arTal_v1_Chr2_+_16869189_16869334 2.18 AT2G40400.1
AT2G40400.2
AT2G40400.3
AT2G40400
DUF399 family protein, putative (DUF399 and DUF3411)
arTal_v1_Chr4_+_1440146_1440177 2.17 AT4G03280.1
AT4G03280.2
PETC
photosynthetic electron transfer C
arTal_v1_Chr2_+_12588191_12588197 2.17 AT2G29300.2
AT2G29300.1
AT2G29300
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr2_+_417427_417427 2.17 AT2G01910.2
ATMAP65-6
Microtubule associated protein (MAP65/ASE1) family protein
arTal_v1_Chr5_+_25243148_25243251 2.16 AT5G62890.2
AT5G62890.4
AT5G62890
Xanthine/uracil permease family protein
arTal_v1_Chr1_-_23251195_23251195 2.16 AT1G62780.1
AT1G62780
dimethylallyl, adenosine tRNA methylthiotransferase
arTal_v1_Chr1_-_47019_47059 2.16 AT1G01080.2
AT1G01080.3
AT1G01080.1
AT1G01080
RNA-binding (RRM/RBD/RNP motifs) family protein
arTal_v1_Chr3_-_18892508_18892508 2.15 AT3G50820.1
PSBO2
photosystem II subunit O-2
arTal_v1_Chr3_-_6818329_6818329 2.15 AT3G19620.1
AT3G19620
Glycosyl hydrolase family protein
arTal_v1_Chr1_-_5265103_5265155 2.14 AT1G15290.2
AT1G15290.1
AT1G15290
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr5_+_733887_733887 2.13 AT5G03120.1
AT5G03120.2
AT5G03120
transmembrane protein
arTal_v1_Chr4_-_6023852_6023852 2.13 AT4G09510.2
CINV2
cytosolic invertase 2
arTal_v1_Chr5_+_2212826_2212826 2.13 AT5G07140.1
AT5G07140
Protein kinase superfamily protein
arTal_v1_Chr5_+_880148_880148 2.12 AT5G03510.1
AT5G03510
C2H2-type zinc finger family protein
arTal_v1_Chr5_+_25191860_25191860 2.12 AT5G62720.2
AT5G62720
Integral membrane HPP family protein
arTal_v1_Chr1_-_12130444_12130444 2.11 AT1G33440.1
AT1G33440
Major facilitator superfamily protein
arTal_v1_Chr1_+_4084162_4084162 2.11 AT1G12080.1
AT1G12080.2
AT1G12080
Vacuolar calcium-binding protein-like protein
arTal_v1_Chr5_+_6387735_6387735 2.10 AT5G19090.5
AT5G19090
Heavy metal transport/detoxification superfamily protein
arTal_v1_Chr5_+_25191402_25191402 2.09 AT5G62720.1
AT5G62720
Integral membrane HPP family protein
arTal_v1_Chr5_+_6138242_6138242 2.09 AT5G18500.1
AT5G18500.2
AT5G18500
Protein kinase superfamily protein
arTal_v1_Chr4_-_6024042_6024042 2.08 AT4G09510.1
CINV2
cytosolic invertase 2
arTal_v1_Chr3_+_8550037_8550037 2.08 AT3G23730.1
XTH16
xyloglucan endotransglucosylase/hydrolase 16
arTal_v1_Chr2_+_416021_416021 2.07 AT2G01910.1
ATMAP65-6
Microtubule associated protein (MAP65/ASE1) family protein
arTal_v1_Chr5_-_8412453_8412512 2.07 AT5G24580.1
AT5G24580.4
AT5G24580
Heavy metal transport/detoxification superfamily protein
arTal_v1_Chr5_+_2202364_2202397 2.06 AT5G07090.1
AT5G07090.3
AT5G07090.2
AT5G07090
Ribosomal protein S4 (RPS4A) family protein
arTal_v1_Chr1_+_24257216_24257216 2.05 AT1G65310.1
XTH17
xyloglucan endotransglucosylase/hydrolase 17
arTal_v1_Chr1_-_18413016_18413016 2.05 AT1G49750.1
AT1G49750
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr5_+_20054501_20054501 2.05 AT5G49460.2
AT5G49460.1
ACLB-2
ATP citrate lyase subunit B 2
arTal_v1_Chr5_-_3930305_3930441 2.05 AT5G12150.2
AT5G12150.1
AT5G12150
Rho GTPase activation protein (RhoGAP) with PH domain-containing protein
arTal_v1_Chr5_+_7168106_7168106 2.04 AT5G21100.1
AT5G21100
Plant L-ascorbate oxidase
arTal_v1_Chr3_+_7096310_7096310 2.04 AT3G20350.1
AT3G20350
actin cytoskeleton-regulatory complex pan-like protein
arTal_v1_Chr5_-_5365391_5365391 2.04 AT5G16400.1
TRXF2
thioredoxin F2
arTal_v1_Chr1_-_8310916_8310916 2.04 AT1G23390.1
AT1G23390
Kelch repeat-containing F-box family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G29230

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
2.4 14.6 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
1.2 3.7 GO:0071485 positive regulation of transporter activity(GO:0032411) positive regulation of ion transmembrane transporter activity(GO:0032414) cellular response to absence of light(GO:0071485) positive regulation of anion channel activity(GO:1901529) positive regulation of anion transport(GO:1903793) positive regulation of anion transmembrane transport(GO:1903961)
1.2 4.6 GO:0080094 response to trehalose-6-phosphate(GO:0080094)
1.1 4.4 GO:0090308 regulation of methylation-dependent chromatin silencing(GO:0090308) positive regulation of methylation-dependent chromatin silencing(GO:0090309)
1.0 3.1 GO:0035017 cuticle pattern formation(GO:0035017)
1.0 5.0 GO:0071260 cellular response to mechanical stimulus(GO:0071260)
1.0 4.8 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.9 2.7 GO:0010062 negative regulation of cell fate specification(GO:0009996) negative regulation of trichoblast fate specification(GO:0010062) negative regulation of plant epidermal cell differentiation(GO:1903889)
0.9 2.6 GO:0010541 acropetal auxin transport(GO:0010541)
0.8 3.3 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.8 4.1 GO:0042549 photosystem II stabilization(GO:0042549)
0.8 3.1 GO:0070509 calcium ion import(GO:0070509)
0.7 3.7 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.7 10.7 GO:0030497 fatty acid elongation(GO:0030497)
0.7 7.8 GO:0010206 photosystem II repair(GO:0010206)
0.7 4.2 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.7 4.2 GO:0031116 positive regulation of microtubule polymerization(GO:0031116)
0.7 10.5 GO:0015976 carbon utilization(GO:0015976)
0.7 12.4 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.7 2.0 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.7 2.6 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.6 3.2 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.6 1.9 GO:0045717 negative regulation of fatty acid biosynthetic process(GO:0045717) regulation of cell cycle arrest(GO:0071156) positive regulation of cell cycle arrest(GO:0071158)
0.6 2.4 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.6 3.6 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.6 4.1 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.5 9.5 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.5 2.6 GO:0035970 peptidyl-threonine dephosphorylation(GO:0035970)
0.5 1.6 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.5 4.1 GO:0016045 detection of bacterium(GO:0016045)
0.5 4.1 GO:0031222 arabinan catabolic process(GO:0031222)
0.5 2.6 GO:0006571 tyrosine biosynthetic process(GO:0006571)
0.5 2.0 GO:0046949 fatty-acyl-CoA biosynthetic process(GO:0046949)
0.5 2.4 GO:0051329 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.5 6.2 GO:0032544 plastid translation(GO:0032544)
0.5 5.9 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.4 1.7 GO:0050792 regulation of viral process(GO:0050792)
0.4 1.3 GO:0000730 DNA recombinase assembly(GO:0000730) strand invasion(GO:0042148)
0.4 1.6 GO:0018023 peptidyl-lysine trimethylation(GO:0018023)
0.4 1.6 GO:0019499 cyanide metabolic process(GO:0019499)
0.4 1.6 GO:1901600 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.4 1.6 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.4 1.2 GO:0009915 phloem sucrose loading(GO:0009915)
0.4 2.4 GO:0042659 regulation of cell fate specification(GO:0042659)
0.4 2.8 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.4 2.3 GO:0009263 deoxyribonucleotide biosynthetic process(GO:0009263)
0.4 1.1 GO:0006148 inosine catabolic process(GO:0006148) inosine metabolic process(GO:0046102)
0.4 2.7 GO:0010148 transpiration(GO:0010148)
0.4 1.5 GO:0009660 amyloplast organization(GO:0009660)
0.4 2.2 GO:0009120 deoxyribonucleoside metabolic process(GO:0009120) thymidine metabolic process(GO:0046104) pyrimidine deoxyribonucleoside metabolic process(GO:0046125)
0.4 5.1 GO:0045493 xylan catabolic process(GO:0045493)
0.4 2.6 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.3 1.4 GO:0046741 transport of virus in host, tissue to tissue(GO:0046741)
0.3 2.1 GO:0007112 male meiosis cytokinesis(GO:0007112)
0.3 22.7 GO:0007018 microtubule-based movement(GO:0007018)
0.3 1.0 GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.3 1.6 GO:0009806 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.3 1.2 GO:0009305 protein biotinylation(GO:0009305)
0.3 1.6 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.3 1.2 GO:0080140 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.3 2.4 GO:0046739 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.3 4.4 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.3 2.9 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.3 13.6 GO:0019762 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.3 0.9 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.3 6.6 GO:1905177 tracheary element differentiation(GO:1905177)
0.3 0.8 GO:1905182 regulation of urease activity(GO:1905181) positive regulation of urease activity(GO:1905182)
0.3 2.2 GO:1990066 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.3 0.8 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.3 4.0 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.3 1.8 GO:0010065 primary meristem tissue development(GO:0010065)
0.3 1.0 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.3 0.8 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.3 1.0 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.3 1.0 GO:0080119 ER body organization(GO:0080119)
0.3 1.3 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.2 2.0 GO:0034471 rRNA 5'-end processing(GO:0000967) ncRNA 5'-end processing(GO:0034471)
0.2 0.7 GO:0071457 cellular response to ozone(GO:0071457)
0.2 0.7 GO:0007130 synaptonemal complex assembly(GO:0007130) synaptonemal complex organization(GO:0070193)
0.2 3.7 GO:0055069 zinc ion homeostasis(GO:0055069)
0.2 1.5 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.2 0.2 GO:0045827 negative regulation of isoprenoid metabolic process(GO:0045827)
0.2 8.7 GO:0045492 xylan biosynthetic process(GO:0045492)
0.2 6.3 GO:0008360 regulation of cell shape(GO:0008360)
0.2 0.7 GO:0080178 5-carbamoylmethyl uridine residue modification(GO:0080178)
0.2 0.9 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.2 1.6 GO:0090057 root radial pattern formation(GO:0090057)
0.2 2.1 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.2 0.7 GO:0048729 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.2 2.2 GO:0010088 phloem development(GO:0010088)
0.2 14.9 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.2 0.9 GO:0048462 carpel formation(GO:0048462)
0.2 3.3 GO:0010588 cotyledon vascular tissue pattern formation(GO:0010588)
0.2 1.1 GO:0006549 isoleucine metabolic process(GO:0006549) isoleucine biosynthetic process(GO:0009097)
0.2 0.8 GO:0010253 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.2 4.8 GO:0071483 cellular response to blue light(GO:0071483)
0.2 1.0 GO:0035279 leaf proximal/distal pattern formation(GO:0010589) mRNA cleavage involved in gene silencing by miRNA(GO:0035279) mRNA cleavage involved in gene silencing(GO:0098795)
0.2 1.6 GO:0010205 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155)
0.2 3.0 GO:0009098 leucine biosynthetic process(GO:0009098)
0.2 1.2 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.2 1.2 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.2 1.4 GO:0009957 epidermal cell fate specification(GO:0009957)
0.2 1.0 GO:0007142 male meiosis II(GO:0007142)
0.2 3.6 GO:0006949 syncytium formation(GO:0006949)
0.2 0.6 GO:0008153 para-aminobenzoic acid biosynthetic process(GO:0008153)
0.2 2.6 GO:0006353 DNA-templated transcription, termination(GO:0006353)
0.2 4.9 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.2 8.8 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.2 2.7 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.2 0.5 GO:1990532 stress response to nickel ion(GO:1990532)
0.2 5.3 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.2 2.8 GO:0048829 root cap development(GO:0048829)
0.2 0.7 GO:0042939 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.2 0.7 GO:1901672 positive regulation of systemic acquired resistance(GO:1901672)
0.2 2.0 GO:0080086 stamen filament development(GO:0080086)
0.2 1.7 GO:0033619 membrane protein proteolysis(GO:0033619)
0.2 1.6 GO:0036065 fucosylation(GO:0036065)
0.2 1.1 GO:0051955 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.2 0.8 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.2 13.7 GO:0045490 pectin catabolic process(GO:0045490)
0.2 0.9 GO:0015969 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.1 1.9 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.1 4.6 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.1 1.8 GO:0042793 transcription from plastid promoter(GO:0042793)
0.1 1.1 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.1 5.8 GO:0045489 pectin biosynthetic process(GO:0045489)
0.1 0.4 GO:1903175 fatty alcohol biosynthetic process(GO:1903175)
0.1 0.5 GO:0046068 cGMP biosynthetic process(GO:0006182) cGMP metabolic process(GO:0046068)
0.1 8.1 GO:0007267 cell-cell signaling(GO:0007267)
0.1 2.2 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.1 0.8 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.1 0.5 GO:0034389 lipid particle organization(GO:0034389)
0.1 0.5 GO:0046416 D-amino acid metabolic process(GO:0046416)
0.1 0.7 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.1 8.8 GO:0019684 photosynthesis, light reaction(GO:0019684)
0.1 1.0 GO:0018344 protein geranylgeranylation(GO:0018344)
0.1 1.1 GO:0071249 cellular response to nitrate(GO:0071249)
0.1 0.4 GO:0010520 regulation of reciprocal meiotic recombination(GO:0010520)
0.1 2.2 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.1 0.6 GO:0045597 positive regulation of cell differentiation(GO:0045597)
0.1 2.9 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.1 1.4 GO:0046520 sphingoid biosynthetic process(GO:0046520)
0.1 1.6 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.1 0.4 GO:0010338 leaf formation(GO:0010338)
0.1 5.1 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.1 0.6 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.1 3.7 GO:0000272 polysaccharide catabolic process(GO:0000272)
0.1 1.5 GO:0031425 chloroplast RNA processing(GO:0031425)
0.1 0.5 GO:0080009 mRNA methylation(GO:0080009)
0.1 3.6 GO:0009682 induced systemic resistance(GO:0009682)
0.1 1.0 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.1 0.3 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.1 1.3 GO:0031408 oxylipin biosynthetic process(GO:0031408)
0.1 2.2 GO:0009944 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.1 0.5 GO:0006297 nucleotide-excision repair, DNA gap filling(GO:0006297)
0.1 0.7 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.1 0.7 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.1 1.3 GO:0006384 transcription initiation from RNA polymerase III promoter(GO:0006384)
0.1 1.4 GO:2000104 negative regulation of DNA-dependent DNA replication(GO:2000104)
0.1 1.7 GO:0007064 mitotic sister chromatid cohesion(GO:0007064)
0.1 1.1 GO:0034644 cellular response to UV(GO:0034644)
0.1 1.7 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.1 0.7 GO:0009803 cinnamic acid metabolic process(GO:0009803)
0.1 0.9 GO:1904668 positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.1 0.4 GO:0043406 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.1 1.2 GO:0048766 root hair initiation(GO:0048766)
0.1 4.0 GO:0035266 meristem growth(GO:0035266)
0.1 0.5 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.1 0.8 GO:0010951 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.1 2.4 GO:0009686 gibberellin biosynthetic process(GO:0009686)
0.1 0.4 GO:0070525 tRNA threonylcarbamoyladenosine metabolic process(GO:0070525)
0.1 1.8 GO:0080154 regulation of fertilization(GO:0080154) regulation of double fertilization forming a zygote and endosperm(GO:0080155)
0.1 0.6 GO:0010115 regulation of abscisic acid biosynthetic process(GO:0010115)
0.1 1.3 GO:0050821 protein stabilization(GO:0050821)
0.1 0.9 GO:0042726 flavin-containing compound metabolic process(GO:0042726)
0.1 0.2 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.1 6.0 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.1 1.4 GO:1901068 guanosine-containing compound metabolic process(GO:1901068)
0.1 0.6 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.1 3.7 GO:0009664 plant-type cell wall organization(GO:0009664)
0.1 0.3 GO:0032950 regulation of beta-glucan metabolic process(GO:0032950) regulation of beta-glucan biosynthetic process(GO:0032951) regulation of cellulose biosynthetic process(GO:2001006)
0.1 0.9 GO:0009704 de-etiolation(GO:0009704)
0.1 0.3 GO:0010424 DNA methylation on cytosine within a CG sequence(GO:0010424)
0.1 2.3 GO:0046916 cellular transition metal ion homeostasis(GO:0046916)
0.1 1.0 GO:0006094 gluconeogenesis(GO:0006094)
0.1 1.8 GO:0030705 vesicle transport along actin filament(GO:0030050) cytoskeleton-dependent intracellular transport(GO:0030705) vesicle cytoskeletal trafficking(GO:0099518)
0.1 0.8 GO:0008216 spermidine metabolic process(GO:0008216)
0.1 0.7 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.1 0.5 GO:0071585 detoxification of cadmium ion(GO:0071585)
0.1 0.9 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.1 1.5 GO:0010090 trichome morphogenesis(GO:0010090)
0.1 0.2 GO:0016094 polyprenol biosynthetic process(GO:0016094)
0.1 1.8 GO:0051225 spindle assembly(GO:0051225)
0.1 2.2 GO:0016126 sterol biosynthetic process(GO:0016126)
0.1 1.6 GO:0010027 thylakoid membrane organization(GO:0010027)
0.1 0.6 GO:0010093 specification of floral organ identity(GO:0010093)
0.1 0.7 GO:0048658 anther wall tapetum development(GO:0048658)
0.1 1.6 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.1 1.6 GO:0006284 base-excision repair(GO:0006284)
0.1 0.2 GO:0042276 translesion synthesis(GO:0019985) error-prone translesion synthesis(GO:0042276)
0.1 0.4 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.1 1.0 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.1 3.1 GO:0010119 regulation of stomatal movement(GO:0010119)
0.1 0.6 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.1 0.2 GO:0030031 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
0.1 0.7 GO:0002098 tRNA wobble uridine modification(GO:0002098)
0.1 1.1 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.1 0.7 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.1 0.4 GO:0080060 integument development(GO:0080060)
0.1 0.2 GO:0032011 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.1 0.7 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.1 1.4 GO:0006270 DNA replication initiation(GO:0006270)
0.1 0.4 GO:0032456 endocytic recycling(GO:0032456)
0.0 0.7 GO:0006544 glycine metabolic process(GO:0006544)
0.0 1.6 GO:0016144 S-glycoside biosynthetic process(GO:0016144) glycosinolate biosynthetic process(GO:0019758) glucosinolate biosynthetic process(GO:0019761)
0.0 0.7 GO:0006298 mismatch repair(GO:0006298)
0.0 0.3 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.0 0.7 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.0 0.7 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.1 GO:0010124 phenylacetate catabolic process(GO:0010124)
0.0 0.2 GO:0032309 icosanoid secretion(GO:0032309) acid secretion(GO:0046717) arachidonic acid secretion(GO:0050482) icosanoid transport(GO:0071715) fatty acid derivative transport(GO:1901571) arachidonate transport(GO:1903963)
0.0 1.6 GO:0007131 reciprocal meiotic recombination(GO:0007131) reciprocal DNA recombination(GO:0035825)
0.0 0.8 GO:0000373 Group II intron splicing(GO:0000373)
0.0 0.6 GO:0010274 hydrotropism(GO:0010274)
0.0 6.2 GO:0009657 plastid organization(GO:0009657)
0.0 2.4 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.0 1.3 GO:0070588 calcium ion transmembrane transport(GO:0070588)
0.0 0.2 GO:0051103 lagging strand elongation(GO:0006273) DNA ligation involved in DNA repair(GO:0051103)
0.0 1.0 GO:0070417 cellular response to cold(GO:0070417)
0.0 0.9 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.0 1.2 GO:0048481 plant ovule development(GO:0048481)
0.0 0.1 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.0 0.4 GO:0006301 postreplication repair(GO:0006301)
0.0 0.2 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.0 0.4 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.0 0.5 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.0 0.5 GO:0019471 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.6 GO:0010821 regulation of mitochondrion organization(GO:0010821)
0.0 0.3 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.0 0.8 GO:0006816 calcium ion transport(GO:0006816)
0.0 0.3 GO:0080027 response to herbivore(GO:0080027)
0.0 0.3 GO:0009405 pathogenesis(GO:0009405)
0.0 0.8 GO:0010212 response to ionizing radiation(GO:0010212)
0.0 0.3 GO:0045910 negative regulation of chromatin silencing(GO:0031936) negative regulation of DNA recombination(GO:0045910)
0.0 0.6 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.7 GO:0046470 phosphatidylcholine metabolic process(GO:0046470)
0.0 0.9 GO:0006261 DNA-dependent DNA replication(GO:0006261)
0.0 1.0 GO:0009911 positive regulation of flower development(GO:0009911)
0.0 0.6 GO:0006378 mRNA polyadenylation(GO:0006378)
0.0 0.3 GO:0045116 protein neddylation(GO:0045116)
0.0 0.3 GO:0015749 monosaccharide transport(GO:0015749)
0.0 0.9 GO:0009559 embryo sac central cell differentiation(GO:0009559)
0.0 0.3 GO:1900865 chloroplast RNA modification(GO:1900865)
0.0 0.3 GO:0016925 protein sumoylation(GO:0016925)
0.0 0.5 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.0 0.4 GO:0007009 plasma membrane organization(GO:0007009)
0.0 0.7 GO:0030490 maturation of SSU-rRNA(GO:0030490)
0.0 0.3 GO:0006302 double-strand break repair(GO:0006302)
0.0 0.5 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.0 0.3 GO:0009695 jasmonic acid biosynthetic process(GO:0009695)
0.0 0.1 GO:0071108 protein K48-linked deubiquitination(GO:0071108)
0.0 0.1 GO:0006021 inositol biosynthetic process(GO:0006021)
0.0 0.2 GO:0046246 terpene biosynthetic process(GO:0046246)
0.0 0.5 GO:0009789 positive regulation of abscisic acid-activated signaling pathway(GO:0009789)
0.0 0.2 GO:0006275 regulation of DNA replication(GO:0006275)
0.0 0.5 GO:0000122 negative regulation of transcription from RNA polymerase II promoter(GO:0000122)
0.0 0.4 GO:0010311 lateral root formation(GO:0010311)
0.0 0.3 GO:0006613 cotranslational protein targeting to membrane(GO:0006613) SRP-dependent cotranslational protein targeting to membrane(GO:0006614)
0.0 0.1 GO:0060321 acceptance of pollen(GO:0060321)
0.0 0.9 GO:0043086 negative regulation of catalytic activity(GO:0043086)
0.0 0.3 GO:0048825 cotyledon development(GO:0048825)
0.0 0.5 GO:0006310 DNA recombination(GO:0006310)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 8.3 GO:0009503 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.8 2.5 GO:0031390 Ctf18 RFC-like complex(GO:0031390)
0.8 4.1 GO:0005960 glycine cleavage complex(GO:0005960)
0.8 2.4 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.7 4.7 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.6 3.2 GO:0010007 magnesium chelatase complex(GO:0010007)
0.6 2.9 GO:0009897 external side of plasma membrane(GO:0009897)
0.5 1.6 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.5 1.6 GO:0035371 microtubule plus-end(GO:0035371)
0.5 9.1 GO:0009531 secondary cell wall(GO:0009531)
0.5 4.4 GO:0010369 chromocenter(GO:0010369)
0.4 29.4 GO:0010287 plastoglobule(GO:0010287)
0.4 3.3 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.4 4.1 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.4 2.4 GO:0009360 DNA polymerase III complex(GO:0009360)
0.4 15.9 GO:0031978 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.3 2.1 GO:0009346 citrate lyase complex(GO:0009346)
0.3 2.8 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.3 5.9 GO:0009508 plastid chromosome(GO:0009508)
0.3 5.9 GO:0009574 preprophase band(GO:0009574)
0.2 1.2 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.2 3.0 GO:0045298 tubulin complex(GO:0045298)
0.2 0.6 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.2 1.2 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.2 1.4 GO:0031261 DNA replication preinitiation complex(GO:0031261)
0.2 1.7 GO:0071556 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.2 48.0 GO:0048046 apoplast(GO:0048046)
0.2 8.8 GO:0005875 microtubule associated complex(GO:0005875)
0.1 1.0 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.1 0.4 GO:0005775 vacuolar lumen(GO:0005775)
0.1 0.8 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.1 1.0 GO:0070531 BRCA1-A complex(GO:0070531)
0.1 1.8 GO:0016459 myosin complex(GO:0016459)
0.1 0.6 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.1 17.6 GO:0009505 plant-type cell wall(GO:0009505)
0.1 0.7 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.1 3.7 GO:0009706 chloroplast inner membrane(GO:0009706)
0.1 1.3 GO:0005880 nuclear microtubule(GO:0005880)
0.1 1.8 GO:0042644 chloroplast nucleoid(GO:0042644)
0.1 0.9 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.1 24.0 GO:0009534 chloroplast thylakoid(GO:0009534)
0.1 2.0 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.1 0.4 GO:0005876 spindle microtubule(GO:0005876)
0.1 1.0 GO:0030125 clathrin vesicle coat(GO:0030125)
0.1 0.6 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.1 1.0 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.1 16.9 GO:0031225 anchored component of membrane(GO:0031225)
0.1 0.4 GO:0000408 EKC/KEOPS complex(GO:0000408)
0.1 25.8 GO:0009532 plastid stroma(GO:0009532)
0.1 0.5 GO:0030139 endocytic vesicle(GO:0030139)
0.1 1.5 GO:0005686 U2 snRNP(GO:0005686)
0.1 0.2 GO:0097361 CIA complex(GO:0097361)
0.0 13.3 GO:0022626 cytosolic ribosome(GO:0022626)
0.0 0.6 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 0.5 GO:0071011 precatalytic spliceosome(GO:0071011)
0.0 0.2 GO:0030681 ribonuclease MRP complex(GO:0000172) nucleolar ribonuclease P complex(GO:0005655) multimeric ribonuclease P complex(GO:0030681)
0.0 1.3 GO:0000794 condensed nuclear chromosome(GO:0000794)
0.0 1.1 GO:0009504 cell plate(GO:0009504)
0.0 0.6 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.3 GO:0005720 nuclear heterochromatin(GO:0005720)
0.0 0.5 GO:0000784 nuclear chromosome, telomeric region(GO:0000784)
0.0 2.6 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.4 GO:1903561 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.0 1.0 GO:0009579 thylakoid(GO:0009579)
0.0 1.5 GO:0005811 lipid particle(GO:0005811)
0.0 0.8 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 0.2 GO:0031209 SCAR complex(GO:0031209)
0.0 0.3 GO:0005786 signal recognition particle, endoplasmic reticulum targeting(GO:0005786)
0.0 0.4 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 0.2 GO:0030131 clathrin adaptor complex(GO:0030131)
0.0 0.5 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 0.5 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.3 GO:0000786 nucleosome(GO:0000786)
0.0 1.7 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 0.2 GO:0046540 U4/U6 x U5 tri-snRNP complex(GO:0046540)
0.0 0.3 GO:0000145 exocyst(GO:0000145)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.8 14.5 GO:0019137 thioglucosidase activity(GO:0019137)
1.4 4.1 GO:0010242 oxygen evolving activity(GO:0010242)
1.3 3.9 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
1.1 3.4 GO:0000170 sphingosine hydroxylase activity(GO:0000170)
0.9 4.6 GO:0004001 adenosine kinase activity(GO:0004001)
0.9 3.5 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.9 22.4 GO:0016168 chlorophyll binding(GO:0016168)
0.8 6.6 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.8 3.3 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.8 2.3 GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.7 3.7 GO:0016463 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.7 2.8 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.7 2.8 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.7 2.6 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.6 2.5 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.6 14.6 GO:0102337 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.6 1.7 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.6 3.4 GO:0045431 flavonol synthase activity(GO:0045431)
0.6 3.4 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.5 1.6 GO:0051010 microtubule plus-end binding(GO:0051010)
0.5 3.2 GO:0016851 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.5 1.6 GO:0047661 racemase and epimerase activity, acting on amino acids and derivatives(GO:0016855) racemase activity, acting on amino acids and derivatives(GO:0036361) amino-acid racemase activity(GO:0047661)
0.5 4.7 GO:0010429 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.5 1.6 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.5 3.6 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.5 2.5 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.5 6.7 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.5 6.1 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.5 3.7 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.5 2.8 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.5 1.8 GO:0003862 3-isopropylmalate dehydrogenase activity(GO:0003862)
0.4 5.1 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.4 2.6 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.4 8.3 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.4 1.2 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.4 1.2 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.4 1.2 GO:0035671 enone reductase activity(GO:0035671)
0.4 3.1 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.4 3.0 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.4 1.5 GO:0004075 biotin carboxylase activity(GO:0004075)
0.4 27.1 GO:0003777 microtubule motor activity(GO:0003777)
0.4 2.5 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.4 1.1 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.4 1.1 GO:0004044 amidophosphoribosyltransferase activity(GO:0004044)
0.3 3.8 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.3 2.1 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.3 4.4 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.3 4.1 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.3 8.4 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.3 1.0 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.3 1.6 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.3 10.5 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.3 8.2 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.3 4.1 GO:0046556 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556) xylanase activity(GO:0097599)
0.3 1.2 GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity(GO:0004077) biotin-protein ligase activity(GO:0018271)
0.3 1.6 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.3 1.2 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.3 2.4 GO:0005350 pyrimidine nucleobase transmembrane transporter activity(GO:0005350) uracil transmembrane transporter activity(GO:0015210)
0.3 0.9 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.3 1.1 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.3 1.4 GO:0008430 selenium binding(GO:0008430)
0.3 0.8 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.3 1.6 GO:0050017 L-3-cyanoalanine synthase activity(GO:0050017)
0.3 1.6 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.3 0.8 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.3 3.6 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.3 0.8 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.3 1.3 GO:0000150 recombinase activity(GO:0000150)
0.2 9.2 GO:0005262 calcium channel activity(GO:0005262)
0.2 1.6 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.2 2.0 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.2 0.7 GO:0004651 mRNA guanylyltransferase activity(GO:0004484) polynucleotide 5'-phosphatase activity(GO:0004651) RNA guanylyltransferase activity(GO:0008192)
0.2 24.4 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.2 1.1 GO:0016841 ammonia-lyase activity(GO:0016841)
0.2 6.2 GO:0008266 poly(U) RNA binding(GO:0008266)
0.2 0.8 GO:0070006 metalloaminopeptidase activity(GO:0070006)
0.2 5.8 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.2 0.6 GO:0019789 SUMO transferase activity(GO:0019789)
0.2 1.7 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.2 1.2 GO:0048027 mRNA 5'-UTR binding(GO:0048027)
0.2 1.0 GO:0008171 O-methyltransferase activity(GO:0008171)
0.2 1.0 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.2 2.0 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.2 1.0 GO:0004663 Rab geranylgeranyltransferase activity(GO:0004663)
0.2 0.5 GO:0052692 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
0.2 0.9 GO:0051996 farnesyl-diphosphate farnesyltransferase activity(GO:0004310) squalene synthase activity(GO:0051996)
0.2 1.1 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.2 0.9 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.1 1.5 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.1 3.0 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.1 0.9 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.1 1.6 GO:0043733 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.1 7.0 GO:0016759 cellulose synthase activity(GO:0016759)
0.1 0.7 GO:0010179 IAA-Ala conjugate hydrolase activity(GO:0010179)
0.1 1.4 GO:0019843 rRNA binding(GO:0019843)
0.1 9.2 GO:0004650 polygalacturonase activity(GO:0004650)
0.1 0.7 GO:0000048 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.1 5.7 GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor(GO:0016628)
0.1 1.9 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.1 0.8 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.1 0.4 GO:0050377 UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
0.1 0.5 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.1 0.5 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.1 1.0 GO:0005536 glucokinase activity(GO:0004340) glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.1 2.9 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.1 0.9 GO:0016151 nickel cation binding(GO:0016151)
0.1 0.7 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.1 1.2 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.1 0.5 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.1 0.3 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.1 2.7 GO:0010427 abscisic acid binding(GO:0010427)
0.1 0.7 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 0.5 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.1 1.1 GO:0016161 beta-amylase activity(GO:0016161)
0.1 1.4 GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor(GO:0016634)
0.1 1.6 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.1 1.6 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.1 1.6 GO:0008417 fucosyltransferase activity(GO:0008417)
0.1 1.9 GO:0048029 monosaccharide binding(GO:0048029)
0.1 0.7 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.1 0.3 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.1 0.9 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.1 0.6 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.1 1.3 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.1 1.7 GO:0030599 pectinesterase activity(GO:0030599)
0.1 0.8 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.1 5.8 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.1 1.2 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.1 0.9 GO:0008061 chitin binding(GO:0008061)
0.1 0.3 GO:0004488 methenyltetrahydrofolate cyclohydrolase activity(GO:0004477) methylenetetrahydrofolate dehydrogenase (NADP+) activity(GO:0004488)
0.1 0.4 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.1 0.2 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.1 0.5 GO:0003985 acetyl-CoA C-acetyltransferase activity(GO:0003985) C-acetyltransferase activity(GO:0016453)
0.1 2.6 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 0.5 GO:0001653 peptide receptor activity(GO:0001653)
0.1 0.2 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
0.1 1.4 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.1 0.6 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 0.4 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.1 0.7 GO:0008175 tRNA methyltransferase activity(GO:0008175)
0.1 0.7 GO:1904680 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.1 0.9 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.1 2.4 GO:0031490 chromatin DNA binding(GO:0031490)
0.1 1.7 GO:0015925 beta-galactosidase activity(GO:0004565) galactosidase activity(GO:0015925)
0.1 0.3 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.1 0.7 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.1 0.5 GO:0004383 guanylate cyclase activity(GO:0004383)
0.1 0.9 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.1 0.3 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.1 1.5 GO:0030276 clathrin binding(GO:0030276)
0.1 0.3 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.1 0.6 GO:0002020 protease binding(GO:0002020)
0.1 0.3 GO:0030942 endoplasmic reticulum signal peptide binding(GO:0030942)
0.1 1.8 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.1 0.5 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.1 0.7 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.1 0.5 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.1 1.2 GO:0010333 terpene synthase activity(GO:0010333)
0.1 2.7 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.1 0.7 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.1 0.6 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.1 2.4 GO:0016279 lysine N-methyltransferase activity(GO:0016278) protein-lysine N-methyltransferase activity(GO:0016279)
0.1 0.2 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.3 GO:0004849 uridine kinase activity(GO:0004849)
0.0 0.1 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.0 2.9 GO:0043621 protein self-association(GO:0043621)
0.0 0.2 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.0 0.5 GO:0043566 structure-specific DNA binding(GO:0043566)
0.0 0.2 GO:0003910 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.0 2.3 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.0 12.1 GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding(GO:0000981)
0.0 0.5 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.0 0.3 GO:0030151 molybdenum ion binding(GO:0030151)
0.0 0.4 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.0 0.7 GO:0008420 CTD phosphatase activity(GO:0008420)
0.0 1.3 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 9.7 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 1.3 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 0.2 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.0 0.1 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.0 0.3 GO:0017022 myosin binding(GO:0017022)
0.0 1.4 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.6 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 1.6 GO:0017137 Rab GTPase binding(GO:0017137)
0.0 0.2 GO:0048365 Rac GTPase binding(GO:0048365)
0.0 0.8 GO:0008810 cellulase activity(GO:0008810)
0.0 0.5 GO:0070628 proteasome binding(GO:0070628)
0.0 0.1 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.0 5.4 GO:0043531 ADP binding(GO:0043531)
0.0 0.6 GO:0005548 phospholipid transporter activity(GO:0005548)
0.0 1.0 GO:0016782 transferase activity, transferring sulfur-containing groups(GO:0016782)
0.0 0.6 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.0 0.2 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.0 1.6 GO:0038023 signaling receptor activity(GO:0038023)
0.0 0.3 GO:0004499 N,N-dimethylaniline monooxygenase activity(GO:0004499)
0.0 2.5 GO:0008757 S-adenosylmethionine-dependent methyltransferase activity(GO:0008757)
0.0 0.3 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.0 0.8 GO:0003714 transcription corepressor activity(GO:0003714)
0.0 0.1 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.0 1.4 GO:0008017 microtubule binding(GO:0008017)
0.0 0.2 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.0 0.5 GO:0005085 guanyl-nucleotide exchange factor activity(GO:0005085)
0.0 0.2 GO:0004526 ribonuclease P activity(GO:0004526)
0.0 0.3 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.0 0.3 GO:0051119 sugar transmembrane transporter activity(GO:0051119)
0.0 1.9 GO:0019001 GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561)
0.0 0.1 GO:0051018 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.0 1.2 GO:0051082 unfolded protein binding(GO:0051082)
0.0 1.8 GO:0009055 electron carrier activity(GO:0009055)
0.0 0.2 GO:0030983 mismatched DNA binding(GO:0030983)
0.0 0.1 GO:0008083 growth factor activity(GO:0008083)
0.0 0.2 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.0 0.3 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.5 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.2 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 4.0 PID BARD1 PATHWAY BARD1 signaling events
0.3 1.1 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.3 0.8 SA CASPASE CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.2 0.6 PID TCR JNK PATHWAY JNK signaling in the CD4+ TCR pathway
0.2 0.6 PID P53 REGULATION PATHWAY p53 pathway
0.1 0.7 PID AP1 PATHWAY AP-1 transcription factor network
0.1 0.5 PID HDAC CLASSI PATHWAY Signaling events mediated by HDAC Class I
0.1 0.7 NABA CORE MATRISOME Ensemble of genes encoding core extracellular matrix including ECM glycoproteins, collagens and proteoglycans
0.1 0.4 PID IL8 CXCR2 PATHWAY IL8- and CXCR2-mediated signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.7 10.5 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.7 2.7 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.4 1.1 REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha
0.4 8.1 REACTOME INFLUENZA VIRAL RNA TRANSCRIPTION AND REPLICATION Genes involved in Influenza Viral RNA Transcription and Replication
0.4 1.1 REACTOME GASTRIN CREB SIGNALLING PATHWAY VIA PKC AND MAPK Genes involved in Gastrin-CREB signalling pathway via PKC and MAPK
0.3 2.7 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.3 0.9 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.3 0.8 REACTOME SIGNALING BY TGF BETA RECEPTOR COMPLEX Genes involved in Signaling by TGF-beta Receptor Complex
0.3 1.4 REACTOME PROCESSIVE SYNTHESIS ON THE LAGGING STRAND Genes involved in Processive synthesis on the lagging strand
0.3 1.3 REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS Genes involved in Homologous recombination repair of replication-independent double-strand breaks
0.2 0.6 REACTOME SIGNAL ATTENUATION Genes involved in Signal attenuation
0.1 2.1 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis
0.1 0.4 REACTOME SEMAPHORIN INTERACTIONS Genes involved in Semaphorin interactions
0.0 0.1 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase