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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT4G38000

Z-value: 0.70

Transcription factors associated with AT4G38000

Gene Symbol Gene ID Gene Info
AT4G38000
AT4G38000 DNA binding with one finger 4.7

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
DOF4.7arTal_v1_Chr4_+_17858351_17858351-0.661.3e-04Click!

Activity profile of AT4G38000 motif

Sorted Z-values of AT4G38000 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr5_+_9072708_9072727 2.77 AT5G25980.2
AT5G25980.1
AT5G25980.3
TGG2
glucoside glucohydrolase 2
arTal_v1_Chr5_-_19648362_19648362 2.71 AT5G48490.1
AT5G48490
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr1_-_29635931_29635931 2.16 AT1G78820.1
AT1G78820
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
arTal_v1_Chr2_-_16950705_16950705 1.87 AT2G40610.1
EXPA8
expansin A8
arTal_v1_Chr1_-_10475969_10475969 1.80 AT1G29920.1
CAB2
chlorophyll A/B-binding protein 2
arTal_v1_Chr4_-_17777445_17777445 1.79 AT4G37800.1
XTH7
xyloglucan endotransglucosylase/hydrolase 7
arTal_v1_Chr2_+_14577083_14577083 1.78 AT2G34620.1
AT2G34620
Mitochondrial transcription termination factor family protein
arTal_v1_Chr1_+_10371675_10371675 1.74 AT1G29660.1
AT1G29660
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr3_-_8589754_8589754 1.74 AT3G23810.1
SAHH2
S-adenosyl-l-homocysteine (SAH) hydrolase 2
arTal_v1_Chr1_-_24606722_24606722 1.71 AT1G66100.1
AT1G66100
Plant thionin
arTal_v1_Chr4_-_17355891_17356037 1.71 AT4G36850.3
AT4G36850.4
AT4G36850.2
AT4G36850.1
AT4G36850
PQ-loop repeat family protein / transmembrane family protein
arTal_v1_Chr3_+_3857780_3857780 1.70 AT3G12110.1
ACT11
actin-11
arTal_v1_Chr2_-_9062093_9062093 1.68 AT2G21140.1
PRP2
proline-rich protein 2
arTal_v1_Chr3_-_1136397_1136397 1.59 AT3G04290.1
LTL1
Li-tolerant lipase 1
arTal_v1_Chr2_+_8940833_8940833 1.58 AT2G20750.2
AT2G20750.1
EXPB1
expansin B1
arTal_v1_Chr1_-_1940463_1940496 1.55 AT1G06360.1
AT1G06360.2
AT1G06360
Fatty acid desaturase family protein
arTal_v1_Chr3_-_6882235_6882315 1.54 AT3G19820.3
AT3G19820.1
AT3G19820.2
DWF1
cell elongation protein / DWARF1 / DIMINUTO (DIM)
arTal_v1_Chr5_+_18634041_18634041 1.50 AT5G45950.1
AT5G45950
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr3_-_4744263_4744263 1.48 AT3G14240.1
AT3G14240
Subtilase family protein
arTal_v1_Chr1_+_17918207_17918207 1.47 AT1G48480.1
RKL1
receptor-like kinase 1
arTal_v1_Chr2_+_6542166_6542166 1.42 AT2G15090.1
KCS8
3-ketoacyl-CoA synthase 8
arTal_v1_Chr1_+_907523_907651 1.40 AT1G03630.1
AT1G03630.2
POR C
protochlorophyllide oxidoreductase C
arTal_v1_Chr1_-_3880391_3880391 1.40 AT1G11545.1
XTH8
xyloglucan endotransglucosylase/hydrolase 8
arTal_v1_Chr4_+_11663186_11663186 1.37 AT4G22010.1
sks4
SKU5 similar 4
arTal_v1_Chr1_-_11740399_11740399 1.36 AT1G32470.1
AT1G32470
Single hybrid motif superfamily protein
arTal_v1_Chr1_-_4530222_4530222 1.36 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
arTal_v1_Chr5_+_625254_625254 1.35 AT5G02760.1
AT5G02760
Protein phosphatase 2C family protein
arTal_v1_Chr5_-_671687_671687 1.33 AT5G02890.1
AT5G02890
HXXXD-type acyl-transferase family protein
arTal_v1_Chr1_-_84864_84946 1.32 AT1G01190.1
AT1G01190.2
CYP78A8
cytochrome P450, family 78, subfamily A, polypeptide 8
arTal_v1_Chr5_-_18026077_18026077 1.29 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
arTal_v1_Chr3_+_5314817_5314817 1.29 AT3G15680.1
AT3G15680.2
AT3G15680
Ran BP2/NZF zinc finger-like superfamily protein
arTal_v1_Chr5_-_23308680_23308680 1.29 AT5G57560.1
TCH4
Xyloglucan endotransglucosylase/hydrolase family protein
arTal_v1_Chr2_+_6399621_6399621 1.28 AT2G14890.2
AGP9
arabinogalactan protein 9
arTal_v1_Chr1_-_28419635_28419635 1.28 AT1G75680.1
GH9B7
glycosyl hydrolase 9B7
arTal_v1_Chr4_-_18067873_18067873 1.27 AT4G38660.2
AT4G38660
Pathogenesis-related thaumatin superfamily protein
arTal_v1_Chr4_-_7857933_7857933 1.27 AT4G13500.1
AT4G13500
transmembrane protein
arTal_v1_Chr1_-_28423520_28423520 1.26 AT1G75690.1
LQY1
DnaJ/Hsp40 cysteine-rich domain superfamily protein
arTal_v1_Chr1_-_26468703_26468804 1.26 AT1G70280.1
AT1G70280.2
AT1G70280
NHL domain-containing protein
arTal_v1_Chr5_+_4944816_4944816 1.26 AT5G15230.1
GASA4
GAST1 protein homolog 4
arTal_v1_Chr1_-_30041952_30041952 1.26 AT1G79850.1
RPS17
ribosomal protein S17
arTal_v1_Chr5_+_5237970_5238178 1.25 AT5G16030.1
AT5G16030.4
AT5G16030.2
AT5G16030.3
AT5G16030
mental retardation GTPase activating protein
arTal_v1_Chr4_+_14944129_14944129 1.25 AT4G30610.1
BRS1
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr1_-_26515188_26515255 1.24 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
arTal_v1_Chr4_-_17181261_17181261 1.22 AT4G36360.2
BGAL3
beta-galactosidase 3
arTal_v1_Chr4_-_17181466_17181466 1.22 AT4G36360.1
BGAL3
beta-galactosidase 3
arTal_v1_Chr3_-_18559326_18559326 1.22 AT3G50060.1
MYB77
myb domain protein 77
arTal_v1_Chr4_-_18068293_18068293 1.21 AT4G38660.1
AT4G38660
Pathogenesis-related thaumatin superfamily protein
arTal_v1_Chr1_+_22444307_22444307 1.21 AT1G60950.1
FED A
2Fe-2S ferredoxin-like superfamily protein
arTal_v1_Chr2_+_6399405_6399405 1.19 AT2G14890.1
AGP9
arabinogalactan protein 9
arTal_v1_Chr2_+_15335284_15335284 1.19 AT2G36570.1
AT2G36570
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr5_+_5907775_5907775 1.18 AT5G17870.1
PSRP6
plastid-specific 50S ribosomal protein 6
arTal_v1_Chr5_+_5907589_5907589 1.18 AT5G17870.2
PSRP6
plastid-specific 50S ribosomal protein 6
arTal_v1_Chr1_-_22317070_22317070 1.17 AT1G60590.1
AT1G60590
Pectin lyase-like superfamily protein
arTal_v1_Chr1_-_28581315_28581315 1.17 AT1G76160.1
sks5
SKU5 similar 5
arTal_v1_Chr3_-_5854906_5854906 1.17 AT3G17170.1
RFC3
Translation elongation factor EF1B/ribosomal protein S6 family protein
arTal_v1_Chr4_+_16357421_16357421 1.17 AT4G34160.1
CYCD3%3B1
CYCLIN D3;1
arTal_v1_Chr2_+_12014412_12014412 1.16 AT2G28190.1
CSD2
copper/zinc superoxide dismutase 2
arTal_v1_Chr5_+_4945062_4945062 1.16 AT5G15230.2
GASA4
GAST1 protein homolog 4
arTal_v1_Chr1_+_20447157_20447208 1.16 AT1G54820.1
AT1G54820.2
AT1G54820.3
AT1G54820.4
AT1G54820
Protein kinase superfamily protein
arTal_v1_Chr3_+_188321_188384 1.13 AT3G01480.1
AT3G01480.2
CYP38
cyclophilin 38
arTal_v1_Chr3_+_19713799_19713799 1.12 AT3G53190.1
AT3G53190
Pectin lyase-like superfamily protein
arTal_v1_Chr4_+_16022269_16022368 1.12 AT4G33220.1
AT4G33220.2
PME44
pectin methylesterase 44
arTal_v1_Chr2_+_19191247_19191247 1.12 AT2G46710.1
ROPGAP3
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
arTal_v1_Chr5_+_20945676_20945676 1.11 AT5G51560.1
AT5G51560
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr1_+_17867102_17867102 1.11 AT1G48350.1
EMB3105
Ribosomal L18p/L5e family protein
arTal_v1_Chr5_+_5238502_5238502 1.11 AT5G16030.5
AT5G16030
mental retardation GTPase activating protein
arTal_v1_Chr3_-_6980523_6980523 1.10 AT3G20015.1
AT3G20015
Eukaryotic aspartyl protease family protein
arTal_v1_Chr3_+_17929581_17929581 1.09 AT3G48420.1
AT3G48420
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr3_+_6180621_6180621 1.08 AT3G18050.1
AT3G18050
GPI-anchored protein
arTal_v1_Chr1_-_8075037_8075037 1.08 AT1G22810.1
AT1G22810
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr1_+_23911024_23911024 1.07 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
arTal_v1_Chr3_-_7187521_7187521 1.07 AT3G20570.1
ENODL9
early nodulin-like protein 9
arTal_v1_Chr3_+_19613078_19613078 1.06 AT3G52900.1
AT3G52900
RAB6-interacting golgin (DUF662)
arTal_v1_Chr4_+_1415953_1415953 1.06 AT4G03210.2
XTH9
xyloglucan endotransglucosylase/hydrolase 9
arTal_v1_Chr5_+_1952505_1952505 1.06 AT5G06390.1
FLA17
FASCICLIN-like arabinogalactan protein 17 precursor
arTal_v1_Chr3_-_9342223_9342223 1.05 AT3G25660.1
AT3G25660
Amidase family protein
arTal_v1_Chr2_+_1289832_1289832 1.05 AT2G04032.1
ZIP7
zinc transporter 7 precursor
arTal_v1_Chr3_+_8550037_8550037 1.04 AT3G23730.1
XTH16
xyloglucan endotransglucosylase/hydrolase 16
arTal_v1_Chr1_+_9259750_9259750 1.04 AT1G26770.2
EXPA10
expansin A10
arTal_v1_Chr2_+_13647699_13647699 1.04 AT2G32100.1
OFP16
ovate family protein 16
arTal_v1_Chr1_+_9259432_9259432 1.04 AT1G26770.1
EXPA10
expansin A10
arTal_v1_Chr2_+_11550705_11550841 1.04 AT2G27060.1
AT2G27060.2
AT2G27060.3
AT2G27060
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr5_-_345457_345457 1.03 AT5G01890.1
AT5G01890
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr1_-_4265156_4265156 1.03 AT1G12500.1
AT1G12500
Nucleotide-sugar transporter family protein
arTal_v1_Chr1_+_16970214_16970240 1.02 AT1G44900.2
AT1G44900.1
MCM2
minichromosome maintenance (MCM2/3/5) family protein
arTal_v1_Chr4_-_13943732_13943732 1.02 AT4G28050.1
TET7
tetraspanin7
arTal_v1_Chr1_-_8940613_8940613 1.02 AT1G25450.1
KCS5
3-ketoacyl-CoA synthase 5
arTal_v1_Chr3_+_4128334_4128334 1.01 AT3G12930.1
AT3G12930
Lojap-related protein
arTal_v1_Chr5_+_6387341_6387489 1.01 AT5G19090.1
AT5G19090.4
AT5G19090.3
AT5G19090.2
AT5G19090
Heavy metal transport/detoxification superfamily protein
arTal_v1_Chr5_+_3889906_3889906 1.01 AT5G12050.1
AT5G12050
rho GTPase-activating protein
arTal_v1_Chr3_+_10505711_10505711 1.01 AT3G28180.1
CSLC04
Cellulose-synthase-like C4
arTal_v1_Chr1_-_15607966_15607966 1.01 AT1G41830.1
SKS6
SKU5-similar 6
arTal_v1_Chr2_-_12277417_12277417 1.01 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
arTal_v1_Chr2_+_9948594_9948594 1.01 AT2G23360.1
AT2G23360
filament-like protein (DUF869)
arTal_v1_Chr5_+_5078200_5078293 1.01 AT5G15600.1
AT5G15600.2
SP1L4
SPIRAL1-like4
arTal_v1_Chr3_+_9813223_9813223 1.01 AT3G26710.1
CCB1
cofactor assembly of complex C
arTal_v1_Chr1_+_1843463_1843568 1.00 AT1G06080.1
AT1G06080.2
ADS1
delta 9 desaturase 1
arTal_v1_Chr4_+_5839599_5839647 1.00 AT4G09160.1
AT4G09160.2
AT4G09160.3
AT4G09160
SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
arTal_v1_Chr4_-_846792_846814 0.99 AT4G01950.1
AT4G01950.2
GPAT3
glycerol-3-phosphate acyltransferase 3
arTal_v1_Chr2_+_15980848_15980848 0.99 AT2G38140.1
PSRP4
plastid-specific ribosomal protein 4
arTal_v1_Chr1_-_29647691_29647691 0.99 AT1G78860.1
AT1G78860
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
arTal_v1_Chr2_+_19469571_19469612 0.99 AT2G47440.2
AT2G47440.1
AT2G47440
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr4_+_1415617_1415617 0.98 AT4G03210.1
XTH9
xyloglucan endotransglucosylase/hydrolase 9
arTal_v1_Chr2_-_12277245_12277245 0.98 AT2G28630.1
KCS12
3-ketoacyl-CoA synthase 12
arTal_v1_Chr4_+_10651744_10651744 0.98 AT4G19530.1
AT4G19530.2
AT4G19530
disease resistance protein (TIR-NBS-LRR class) family
arTal_v1_Chr3_+_18417568_18417568 0.98 AT3G49670.1
BAM2
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr2_-_1824480_1824480 0.98 AT2G05100.1
AT2G05100.2
LHCB2.1
photosystem II light harvesting complex protein 2.1
arTal_v1_Chr1_-_1169034_1169034 0.97 AT1G04360.1
AT1G04360
RING/U-box superfamily protein
arTal_v1_Chr4_+_12376122_12376194 0.97 AT4G23750.1
AT4G23750.2
CRF2
cytokinin response factor 2
arTal_v1_Chr2_+_14733975_14733975 0.97 AT2G34925.1
CLE42
CLAVATA3/ESR-RELATED 42
arTal_v1_Chr5_+_5431584_5431584 0.97 AT5G16590.1
AT5G16590
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr4_+_10949573_10949573 0.97 AT4G20270.1
BAM3
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr2_-_16198577_16198577 0.96 AT2G38750.1
ANNAT4
annexin 4
arTal_v1_Chr1_+_23144385_23144385 0.96 AT1G62520.1
AT1G62520
sulfated surface-like glycoprotein
arTal_v1_Chr3_-_19553092_19553136 0.96 AT3G52750.3
AT3G52750.1
AT3G52750.4
FTSZ2-2
Tubulin/FtsZ family protein
arTal_v1_Chr2_-_12785037_12785037 0.95 AT2G29980.2
FAD3
fatty acid desaturase 3
arTal_v1_Chr3_+_5934033_5934064 0.95 AT3G17350.1
AT3G17350.2
AT3G17350
wall-associated receptor kinase carboxy-terminal protein
arTal_v1_Chr5_+_13831020_13831020 0.95 AT5G35630.2
GS2
glutamine synthetase 2
arTal_v1_Chr5_+_13830746_13830746 0.95 AT5G35630.3
GS2
glutamine synthetase 2
arTal_v1_Chr3_+_16569051_16569051 0.95 AT3G45230.1
AT3G45230
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr5_+_13830429_13830429 0.95 AT5G35630.1
GS2
glutamine synthetase 2
arTal_v1_Chr5_-_8707885_8707885 0.94 AT5G25190.1
ESE3
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr2_-_16198832_16198832 0.94 AT2G38750.2
ANNAT4
annexin 4
arTal_v1_Chr2_-_12785190_12785190 0.94 AT2G29980.1
FAD3
fatty acid desaturase 3
arTal_v1_Chr2_+_11021848_11021905 0.93 AT2G25840.2
AT2G25840.4
AT2G25840.3
OVA4
Nucleotidylyl transferase superfamily protein
arTal_v1_Chr3_+_2612175_2612175 0.93 AT3G08600.1
AT3G08600
transmembrane protein, putative (DUF1191)
arTal_v1_Chr2_-_1149261_1149261 0.93 AT2G03750.1
AT2G03750
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr1_+_7696427_7696427 0.93 AT1G21910.1
DREB26
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr2_-_10304812_10304812 0.93 AT2G24230.1
AT2G24230
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr1_+_17065858_17065858 0.93 AT1G45130.2
BGAL5
beta-galactosidase 5
arTal_v1_Chr1_-_30330944_30330944 0.93 AT1G80690.1
AT1G80690.2
AT1G80690
PPPDE putative thiol peptidase family protein
arTal_v1_Chr3_-_2407634_2407634 0.92 AT3G07540.1
AT3G07540
Actin-binding FH2 (formin homology 2) family protein
arTal_v1_Chr5_+_5223934_5223934 0.92 AT5G16000.1
NIK1
NSP-interacting kinase 1
arTal_v1_Chr4_+_14677661_14677695 0.92 AT4G30020.2
AT4G30020.3
AT4G30020
PA-domain containing subtilase family protein
arTal_v1_Chr3_-_1855063_1855197 0.92 AT3G06130.2
AT3G06130.1
AT3G06130
Heavy metal transport/detoxification superfamily protein
arTal_v1_Chr2_-_12885768_12885776 0.91 AT2G30200.2
AT2G30200.1
EMB3147
EMBRYO DEFECTIVE 3147
arTal_v1_Chr3_-_427095_427095 0.91 AT3G02250.1
AT3G02250
O-fucosyltransferase family protein
arTal_v1_Chr1_+_17065111_17065111 0.91 AT1G45130.1
BGAL5
beta-galactosidase 5
arTal_v1_Chr5_+_3157980_3157980 0.91 AT5G10100.2
TPPI
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr3_+_6266946_6267045 0.91 AT3G18280.2
AT3G18280.1
AT3G18280
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr5_+_7240659_7240659 0.90 AT5G21910.1
AT5G21910
transmembrane protein
arTal_v1_Chr1_-_17133809_17133809 0.90 AT1G45207.3
AT1G45207
Remorin family protein
arTal_v1_Chr3_-_15704152_15704152 0.89 AT3G43850.1
AT3G43850
hypothetical protein
arTal_v1_Chr5_+_25159208_25159208 0.89 AT5G62670.1
HA11
H[+]-ATPase 11
arTal_v1_Chr5_+_7778017_7778095 0.89 AT5G23120.2
AT5G23120.1
HCF136
photosystem II stability/assembly factor, chloroplast (HCF136)
arTal_v1_Chr3_-_8058764_8058782 0.89 AT3G22790.3
AT3G22790.2
NET1A
Kinase interacting (KIP1-like) family protein
arTal_v1_Chr1_+_5361865_5361865 0.89 AT1G15570.1
CYCA2%3B3
CYCLIN A2;3
arTal_v1_Chr4_-_8350030_8350030 0.88 AT4G14550.4
IAA14
indole-3-acetic acid inducible 14
arTal_v1_Chr5_-_24381599_24381599 0.88 AT5G60670.1
AT5G60670
Ribosomal protein L11 family protein
arTal_v1_Chr5_+_26061165_26061165 0.88 AT5G65220.1
AT5G65220
Ribosomal L29 family protein
arTal_v1_Chr5_-_26129547_26129547 0.88 AT5G65390.1
AGP7
arabinogalactan protein 7
arTal_v1_Chr4_-_14002069_14002124 0.87 AT4G28250.2
AT4G28250.3
AT4G28250.4
AT4G28250.1
EXPB3
expansin B3
arTal_v1_Chr3_-_7066729_7066729 0.87 AT3G20260.1
AT3G20260
DUF1666 family protein (DUF1666)
arTal_v1_Chr2_-_11727654_11727654 0.87 AT2G27420.1
AT2G27420
Cysteine proteinases superfamily protein
arTal_v1_Chr2_+_10229350_10229350 0.87 AT2G24060.1
AT2G24060
Translation initiation factor 3 protein
arTal_v1_Chr5_-_19899301_19899301 0.87 AT5G49100.1
AT5G49100
vitellogenin-like protein
arTal_v1_Chr5_+_21226721_21226721 0.86 AT5G52280.1
AT5G52280
Myosin heavy chain-related protein
arTal_v1_Chr5_-_24728244_24728244 0.86 AT5G61480.1
PXY
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr2_+_12000239_12000388 0.86 AT2G28150.2
AT2G28150.3
AT2G28150
UPSTREAM OF FLC protein (DUF966)
arTal_v1_Chr1_-_11872926_11872926 0.85 AT1G32780.1
AT1G32780
GroES-like zinc-binding dehydrogenase family protein
arTal_v1_Chr5_-_7419335_7419335 0.85 AT5G22390.1
AT5G22390
FANTASTIC four-like protein (DUF3049)
arTal_v1_Chr3_-_3277930_3277930 0.84 AT3G10520.1
HB2
hemoglobin 2
arTal_v1_Chr1_-_17133548_17133548 0.84 AT1G45207.2
AT1G45207
Remorin family protein
arTal_v1_Chr3_-_10877578_10877578 0.84 AT3G28860.1
ABCB19
ATP binding cassette subfamily B19
arTal_v1_Chr5_+_908563_908563 0.84 AT5G03590.3
AT5G03590.1
AT5G03590
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr3_+_20301759_20301759 0.83 AT3G54820.1
PIP2%3B5
plasma membrane intrinsic protein 2;5
arTal_v1_Chr1_+_6942625_6942717 0.83 AT1G20020.1
AT1G20020.2
AT1G20020.3
FNR2
ferredoxin-NADP[+]-oxidoreductase 2
arTal_v1_Chr4_-_8188811_8188811 0.83 AT4G14200.1
AT4G14200
Pentatricopeptide repeat (PPR) superfamily protein
arTal_v1_Chr5_+_6122725_6122725 0.82 AT5G18460.1
AT5G18460
carboxyl-terminal peptidase (DUF239)
arTal_v1_Chr5_-_24661241_24661241 0.82 AT5G61330.1
AT5G61330.2
AT5G61330
rRNA processing protein-like protein
arTal_v1_Chr5_-_8910063_8910063 0.82 AT5G25590.1
AT5G25590
DNA ligase (DUF630 and DUF632)
arTal_v1_Chr3_+_1813164_1813164 0.82 AT3G06020.1
FAF4
FANTASTIC four-like protein (DUF3049)
arTal_v1_Chr2_+_18691664_18691664 0.82 AT2G45340.1
AT2G45340
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr5_+_25243405_25243417 0.82 AT5G62890.3
AT5G62890.1
AT5G62890
Xanthine/uracil permease family protein
arTal_v1_Chr1_-_4953284_4953284 0.81 AT1G14460.1
AT1G14460
AAA-type ATPase family protein
arTal_v1_Chr4_+_14678096_14678096 0.81 AT4G30020.4
AT4G30020
PA-domain containing subtilase family protein
arTal_v1_Chr3_-_22256177_22256177 0.81 AT3G60220.1
ATL4
TOXICOS EN LEVADURA 4
arTal_v1_Chr1_+_19879405_19879405 0.81 AT1G53300.1
TTL1
tetratricopetide-repeat thioredoxin-like 1
arTal_v1_Chr5_-_14199431_14199431 0.81 AT5G36120.1
CCB3
cofactor assembly, complex C (B6F)
arTal_v1_Chr3_-_22295529_22295529 0.80 AT3G60320.1
AT3G60320
bZIP domain class transcription factor (DUF630 and DUF632)
arTal_v1_Chr5_+_26281642_26281711 0.80 AT5G65700.1
AT5G65700.2
BAM1
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr1_-_3272110_3272110 0.80 AT1G10020.1
AT1G10020
formin-like protein (DUF1005)
arTal_v1_Chr4_-_13194124_13194124 0.80 AT4G25990.1
AT4G25990.3
CIL
CCT motif family protein
arTal_v1_Chr5_-_13959830_13959830 0.80 AT5G35790.1
G6PD1
glucose-6-phosphate dehydrogenase 1
arTal_v1_Chr1_+_26093026_26093026 0.80 AT1G69420.2
AT1G69420.1
AT1G69420
DHHC-type zinc finger family protein
arTal_v1_Chr5_+_463073_463073 0.80 AT5G02260.1
EXPA9
expansin A9
arTal_v1_Chr3_+_18514266_18514266 0.80 AT3G49940.1
LBD38
LOB domain-containing protein 38
arTal_v1_Chr1_-_29352946_29352946 0.80 AT1G78060.1
AT1G78060
Glycosyl hydrolase family protein
arTal_v1_Chr4_-_8350263_8350263 0.80 AT4G14550.1
AT4G14550.2
AT4G14550.3
IAA14
indole-3-acetic acid inducible 14
arTal_v1_Chr2_-_444324_444324 0.79 AT2G01950.1
BRL2
BRI1-like 2
arTal_v1_Chr5_+_908251_908251 0.79 AT5G03590.2
AT5G03590
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr1_-_7040231_7040231 0.79 AT1G20330.1
SMT2
sterol methyltransferase 2
arTal_v1_Chr3_-_19552872_19552872 0.79 AT3G52750.2
FTSZ2-2
Tubulin/FtsZ family protein
arTal_v1_Chr5_+_25243148_25243251 0.79 AT5G62890.2
AT5G62890.4
AT5G62890
Xanthine/uracil permease family protein
arTal_v1_Chr3_-_1858946_1858946 0.79 AT3G06140.1
LUL4
RING/U-box superfamily protein
arTal_v1_Chr2_-_18443405_18443405 0.78 AT2G44740.1
CYCP4%3B1
cyclin p4;1
arTal_v1_Chr1_-_26560123_26560123 0.78 AT1G70470.1
AT1G70470
transmembrane protein
arTal_v1_Chr2_-_918671_918671 0.78 AT2G03090.1
EXPA15
expansin A15
arTal_v1_Chr3_-_8564717_8564717 0.78 AT3G23760.1
AT3G23760
transferring glycosyl group transferase
arTal_v1_Chr1_-_2190784_2190784 0.78 AT1G07135.1
AT1G07135
glycine-rich protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G38000

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.7 GO:0006436 tryptophanyl-tRNA aminoacylation(GO:0006436)
0.4 1.8 GO:0010480 microsporocyte differentiation(GO:0010480)
0.4 1.7 GO:0033353 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.4 3.2 GO:0010065 primary meristem tissue development(GO:0010065)
0.4 1.2 GO:0071457 cellular response to ozone(GO:0071457)
0.4 1.2 GO:0006110 regulation of glycolytic process(GO:0006110) regulation of nucleotide catabolic process(GO:0030811) regulation of carbohydrate catabolic process(GO:0043470) regulation of cellular carbohydrate catabolic process(GO:0043471)
0.4 7.2 GO:0006949 syncytium formation(GO:0006949)
0.4 1.8 GO:0046713 borate transport(GO:0046713)
0.4 1.1 GO:0048872 tissue homeostasis(GO:0001894) homeostasis of number of meristem cells(GO:0007639) homeostasis of number of cells(GO:0048872) homeostasis of number of cells within a tissue(GO:0048873)
0.4 2.5 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.3 1.0 GO:0010541 acropetal auxin transport(GO:0010541)
0.3 1.3 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.3 1.0 GO:0090058 metaxylem development(GO:0090058)
0.3 2.5 GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning(GO:0060774)
0.3 1.6 GO:0010226 response to lithium ion(GO:0010226)
0.3 2.2 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.3 0.3 GO:2000692 negative regulation of seed maturation(GO:2000692)
0.3 1.0 GO:1902292 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.3 6.1 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.2 1.2 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.2 2.5 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.2 1.7 GO:1904278 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.2 0.9 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.2 1.2 GO:0060631 regulation of meiosis I(GO:0060631)
0.2 0.9 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.2 1.3 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.2 0.8 GO:0015669 gas transport(GO:0015669)
0.2 0.6 GO:0044154 histone H3-K14 acetylation(GO:0044154)
0.2 0.4 GO:0009915 phloem sucrose loading(GO:0009915)
0.2 1.4 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.2 1.4 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.2 0.4 GO:0042539 hypotonic salinity response(GO:0042539)
0.2 0.7 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.2 2.0 GO:0010233 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.2 0.7 GO:0080003 thalianol metabolic process(GO:0080003)
0.2 0.9 GO:0051319 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.2 0.7 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.2 0.5 GO:2000029 regulation of proanthocyanidin biosynthetic process(GO:2000029)
0.2 1.6 GO:0006168 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.2 2.2 GO:0032544 plastid translation(GO:0032544)
0.2 1.2 GO:0080117 secondary growth(GO:0080117)
0.2 0.5 GO:0033259 plastid DNA metabolic process(GO:0033258) plastid DNA replication(GO:0033259)
0.2 1.2 GO:0009099 valine biosynthetic process(GO:0009099)
0.2 1.5 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.2 1.0 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769) positive regulation of reactive oxygen species biosynthetic process(GO:1903428)
0.2 0.6 GO:0050891 regulation of body fluid levels(GO:0050878) multicellular organismal water homeostasis(GO:0050891)
0.2 1.2 GO:0009643 photosynthetic acclimation(GO:0009643)
0.2 0.2 GO:0010254 nectary development(GO:0010254)
0.1 0.7 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.1 2.8 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.1 0.6 GO:0015959 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.1 0.7 GO:1902299 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.1 1.6 GO:0007143 female meiotic division(GO:0007143)
0.1 0.8 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.1 0.4 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.1 0.7 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.1 0.4 GO:2000011 regulation of multicellular organism growth(GO:0040014) sepal giant cell differentiation(GO:0090392) regulation of adaxial/abaxial pattern formation(GO:2000011)
0.1 0.5 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.1 1.0 GO:0071486 cellular response to high light intensity(GO:0071486)
0.1 1.1 GO:2000779 regulation of double-strand break repair(GO:2000779)
0.1 0.6 GO:0007020 microtubule nucleation(GO:0007020)
0.1 0.2 GO:0034502 protein localization to chromosome(GO:0034502)
0.1 0.8 GO:0010155 regulation of proton transport(GO:0010155)
0.1 0.2 GO:2000036 regulation of stem cell population maintenance(GO:2000036) regulation of stem cell differentiation(GO:2000736)
0.1 1.3 GO:0010206 photosystem II repair(GO:0010206)
0.1 0.7 GO:0006346 methylation-dependent chromatin silencing(GO:0006346)
0.1 3.1 GO:0010143 cutin biosynthetic process(GO:0010143)
0.1 0.7 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.1 1.6 GO:0018231 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.1 0.5 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.1 6.7 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.1 0.3 GO:0070212 protein ADP-ribosylation(GO:0006471) protein poly-ADP-ribosylation(GO:0070212)
0.1 0.5 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.1 0.4 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.1 0.9 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.1 1.8 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.1 0.5 GO:0010338 leaf formation(GO:0010338)
0.1 1.5 GO:0030497 fatty acid elongation(GO:0030497)
0.1 0.3 GO:0010981 regulation of cell wall macromolecule metabolic process(GO:0010981)
0.1 0.1 GO:0010253 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.1 0.4 GO:0006297 nucleotide-excision repair, DNA gap filling(GO:0006297)
0.1 0.3 GO:1990110 callus formation(GO:1990110)
0.1 1.4 GO:0010274 hydrotropism(GO:0010274)
0.1 1.1 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.1 0.6 GO:0031507 heterochromatin assembly(GO:0031507)
0.1 0.9 GO:0009957 epidermal cell fate specification(GO:0009957)
0.1 3.2 GO:0016131 phytosteroid metabolic process(GO:0016128) brassinosteroid metabolic process(GO:0016131)
0.1 0.4 GO:1900370 positive regulation of RNA interference(GO:1900370)
0.1 2.1 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.1 0.3 GO:1900909 negative regulation of ethylene biosynthetic process(GO:0010366) negative regulation of sulfur amino acid metabolic process(GO:0031336) negative regulation of cellular amine metabolic process(GO:0033239) negative regulation of cellular amino acid metabolic process(GO:0045763) negative regulation of sulfur metabolic process(GO:0051175) negative regulation of olefin metabolic process(GO:1900909) negative regulation of olefin biosynthetic process(GO:1900912)
0.1 0.6 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.1 0.5 GO:0000212 meiotic spindle organization(GO:0000212)
0.1 0.7 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.1 0.8 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.1 0.3 GO:0080119 ER body organization(GO:0080119)
0.1 0.3 GO:0048462 carpel formation(GO:0048462)
0.1 0.4 GO:0008295 spermidine biosynthetic process(GO:0008295)
0.1 2.6 GO:0030705 cytoskeleton-dependent intracellular transport(GO:0030705)
0.1 0.4 GO:0048629 trichome patterning(GO:0048629)
0.1 0.2 GO:0002009 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.1 0.6 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.1 1.1 GO:0010315 auxin efflux(GO:0010315)
0.1 0.1 GO:0048533 sporocyte differentiation(GO:0048533)
0.1 0.2 GO:0018364 box C/D snoRNA 3'-end processing(GO:0000494) peptidyl-glutamine methylation(GO:0018364) box C/D snoRNA metabolic process(GO:0033967) box C/D snoRNA processing(GO:0034963) histone glutamine methylation(GO:1990258)
0.1 0.4 GO:0005980 glycogen catabolic process(GO:0005980)
0.1 0.6 GO:0009799 specification of symmetry(GO:0009799)
0.1 0.4 GO:0043447 alkane biosynthetic process(GO:0043447)
0.1 1.0 GO:0010052 guard cell differentiation(GO:0010052)
0.1 0.4 GO:0034724 DNA replication-independent nucleosome organization(GO:0034724)
0.1 0.8 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.1 0.4 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.1 0.2 GO:0010434 bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.1 3.5 GO:0019759 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.1 0.9 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.1 0.5 GO:0015837 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.1 0.4 GO:0006915 apoptotic process(GO:0006915) regulation of apoptotic process(GO:0042981) negative regulation of apoptotic process(GO:0043066)
0.1 0.6 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655) phosphatidylglycerol metabolic process(GO:0046471)
0.1 0.6 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.1 2.0 GO:0019750 chloroplast localization(GO:0019750) plastid localization(GO:0051644)
0.1 0.3 GO:0090342 regulation of cell aging(GO:0090342)
0.1 0.7 GO:2000816 mitotic spindle assembly checkpoint(GO:0007094) spindle checkpoint(GO:0031577) negative regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032435) negative regulation of sister chromatid segregation(GO:0033046) negative regulation of mitotic sister chromatid segregation(GO:0033048) negative regulation of mitotic metaphase/anaphase transition(GO:0045841) negative regulation of chromosome segregation(GO:0051985) spindle assembly checkpoint(GO:0071173) mitotic spindle checkpoint(GO:0071174) negative regulation of proteasomal protein catabolic process(GO:1901799) negative regulation of metaphase/anaphase transition of cell cycle(GO:1902100) negative regulation of proteolysis involved in cellular protein catabolic process(GO:1903051) negative regulation of cellular protein catabolic process(GO:1903363) negative regulation of mitotic sister chromatid separation(GO:2000816)
0.1 0.6 GO:1903340 positive regulation of secondary cell wall biogenesis(GO:1901348) positive regulation of cell wall organization or biogenesis(GO:1903340)
0.1 1.5 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.1 1.4 GO:0000038 very long-chain fatty acid metabolic process(GO:0000038)
0.1 0.7 GO:0080111 DNA demethylation(GO:0080111)
0.1 0.2 GO:0009647 skotomorphogenesis(GO:0009647)
0.1 0.2 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.1 0.6 GO:0071514 regulation of gene expression by genetic imprinting(GO:0006349) genetic imprinting(GO:0071514)
0.1 0.8 GO:2000067 regulation of root morphogenesis(GO:2000067)
0.1 0.3 GO:0048359 mucilage metabolic process involved in seed coat development(GO:0048359)
0.1 0.2 GO:0035493 SNARE complex assembly(GO:0035493)
0.1 0.8 GO:0045492 xylan biosynthetic process(GO:0045492)
0.1 0.8 GO:0046348 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.1 0.2 GO:0071277 cellular response to calcium ion(GO:0071277)
0.1 0.2 GO:0010452 histone H3-K36 methylation(GO:0010452)
0.1 1.1 GO:0050821 protein stabilization(GO:0050821)
0.1 0.3 GO:0046208 spermine catabolic process(GO:0046208)
0.1 0.8 GO:0009704 de-etiolation(GO:0009704)
0.1 3.2 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.1 1.1 GO:0009944 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.1 0.8 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.1 2.0 GO:0051225 spindle assembly(GO:0051225)
0.1 0.5 GO:0033619 membrane protein proteolysis(GO:0033619)
0.1 0.2 GO:0010424 DNA methylation on cytosine within a CG sequence(GO:0010424)
0.1 2.4 GO:0048825 cotyledon development(GO:0048825)
0.1 0.3 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.1 0.8 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.1 0.3 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.1 0.6 GO:0044070 regulation of anion transport(GO:0044070)
0.1 0.2 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.0 0.5 GO:0048859 formation of organ boundary(GO:0010160) organ boundary specification between lateral organs and the meristem(GO:0010199) organ formation(GO:0048645) formation of anatomical boundary(GO:0048859)
0.0 0.4 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.0 0.7 GO:0048564 photosystem I assembly(GO:0048564)
0.0 0.2 GO:0006449 regulation of translational termination(GO:0006449)
0.0 4.9 GO:0009664 plant-type cell wall organization(GO:0009664)
0.0 0.1 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.0 1.9 GO:0009694 jasmonic acid metabolic process(GO:0009694)
0.0 0.1 GO:0006424 glutamyl-tRNA aminoacylation(GO:0006424) glutaminyl-tRNA aminoacylation(GO:0006425)
0.0 0.9 GO:0045493 xylan catabolic process(GO:0045493)
0.0 0.3 GO:0032886 regulation of microtubule-based process(GO:0032886)
0.0 1.1 GO:0043622 cortical microtubule organization(GO:0043622)
0.0 0.3 GO:0048446 petal morphogenesis(GO:0048446)
0.0 1.4 GO:0006730 one-carbon metabolic process(GO:0006730)
0.0 0.6 GO:0030488 tRNA methylation(GO:0030488)
0.0 0.2 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.0 0.1 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.0 0.2 GO:0042989 sequestering of actin monomers(GO:0042989)
0.0 0.2 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.0 1.2 GO:0010582 floral meristem determinacy(GO:0010582)
0.0 0.4 GO:0007076 mitotic chromosome condensation(GO:0007076)
0.0 0.5 GO:0006353 DNA-templated transcription, termination(GO:0006353)
0.0 0.9 GO:0009685 gibberellin metabolic process(GO:0009685) gibberellin biosynthetic process(GO:0009686)
0.0 2.8 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.0 0.6 GO:0055069 zinc ion homeostasis(GO:0055069)
0.0 1.2 GO:0070417 cellular response to cold(GO:0070417)
0.0 0.0 GO:0042177 negative regulation of protein catabolic process(GO:0042177)
0.0 0.5 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.0 0.7 GO:0000373 Group II intron splicing(GO:0000373)
0.0 0.4 GO:0010267 production of ta-siRNAs involved in RNA interference(GO:0010267)
0.0 0.4 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.0 1.1 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.4 GO:0017183 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.5 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.0 0.7 GO:0005983 starch catabolic process(GO:0005983)
0.0 0.6 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.0 0.2 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.0 0.1 GO:0045604 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.0 0.5 GO:0030865 cortical cytoskeleton organization(GO:0030865)
0.0 0.7 GO:0006935 chemotaxis(GO:0006935) pollen tube guidance(GO:0010183) taxis(GO:0042330) positive chemotaxis(GO:0050918)
0.0 0.2 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.0 0.4 GO:0009094 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.0 1.0 GO:0009851 auxin biosynthetic process(GO:0009851)
0.0 0.3 GO:0071249 cellular response to nitrate(GO:0071249)
0.0 0.7 GO:0009838 abscission(GO:0009838)
0.0 0.7 GO:0080155 regulation of fertilization(GO:0080154) regulation of double fertilization forming a zygote and endosperm(GO:0080155)
0.0 0.5 GO:0010152 pollen maturation(GO:0010152)
0.0 0.4 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.0 0.4 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.0 0.4 GO:0006547 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 1.0 GO:0010197 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.0 1.5 GO:0010102 post-embryonic root morphogenesis(GO:0010101) lateral root morphogenesis(GO:0010102)
0.0 1.5 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.7 GO:0007186 G-protein coupled receptor signaling pathway(GO:0007186)
0.0 0.4 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 0.2 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.0 0.2 GO:1990066 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.0 0.3 GO:0015914 phospholipid transport(GO:0015914)
0.0 1.9 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 0.4 GO:0033674 positive regulation of kinase activity(GO:0033674)
0.0 0.1 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.0 0.5 GO:0080022 primary root development(GO:0080022)
0.0 0.6 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.1 GO:0019747 regulation of isoprenoid metabolic process(GO:0019747)
0.0 0.1 GO:0006266 DNA ligation(GO:0006266) DNA ligation involved in DNA repair(GO:0051103)
0.0 0.1 GO:0090603 sieve element differentiation(GO:0090603)
0.0 0.3 GO:0006415 translational termination(GO:0006415)
0.0 0.9 GO:0016485 protein processing(GO:0016485)
0.0 0.2 GO:0016094 polyprenol biosynthetic process(GO:0016094)
0.0 0.5 GO:0009959 negative gravitropism(GO:0009959)
0.0 0.1 GO:0035627 ceramide transport(GO:0035627)
0.0 0.2 GO:1904668 positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.0 2.5 GO:0009860 pollen tube growth(GO:0009860)
0.0 0.3 GO:0043044 ATP-dependent chromatin remodeling(GO:0043044)
0.0 0.1 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.0 0.1 GO:0006491 N-glycan processing(GO:0006491)
0.0 0.3 GO:1900865 chloroplast RNA modification(GO:1900865)
0.0 0.1 GO:0060359 response to ammonium ion(GO:0060359)
0.0 0.4 GO:0006108 malate metabolic process(GO:0006108)
0.0 0.4 GO:0019827 stem cell population maintenance(GO:0019827) maintenance of cell number(GO:0098727)
0.0 0.7 GO:0009631 cold acclimation(GO:0009631)
0.0 0.2 GO:0001709 cell fate determination(GO:0001709)
0.0 0.2 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 1.1 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.4 GO:0022611 seed dormancy process(GO:0010162) dormancy process(GO:0022611)
0.0 0.2 GO:0006538 glutamate catabolic process(GO:0006538)
0.0 0.2 GO:0051026 chiasma assembly(GO:0051026)
0.0 0.1 GO:0048209 regulation of vesicle targeting, to, from or within Golgi(GO:0048209)
0.0 1.1 GO:0030036 actin cytoskeleton organization(GO:0030036)
0.0 0.3 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.6 GO:0006414 translational elongation(GO:0006414)
0.0 0.3 GO:0008356 asymmetric cell division(GO:0008356)
0.0 0.2 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.3 GO:0006722 triterpenoid metabolic process(GO:0006722)
0.0 0.1 GO:0006265 DNA topological change(GO:0006265)
0.0 0.1 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.0 0.2 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.0 0.1 GO:0045596 negative regulation of cell differentiation(GO:0045596) maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.0 0.2 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.0 0.1 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.0 0.0 GO:0018315 molybdenum incorporation into molybdenum-molybdopterin complex(GO:0018315) metal incorporation into metallo-molybdopterin complex(GO:0042040)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.3 GO:0016328 lateral plasma membrane(GO:0016328)
0.3 1.4 GO:0005960 glycine cleavage complex(GO:0005960)
0.2 0.9 GO:0016461 unconventional myosin complex(GO:0016461)
0.2 1.1 GO:0034425 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.2 2.4 GO:0005663 DNA replication factor C complex(GO:0005663)
0.2 0.6 GO:0016323 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.2 0.8 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.2 3.2 GO:0009531 secondary cell wall(GO:0009531)
0.2 1.7 GO:0042555 MCM complex(GO:0042555)
0.1 0.1 GO:0035101 FACT complex(GO:0035101)
0.1 0.7 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.1 0.5 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.1 0.9 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.1 0.7 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.1 1.1 GO:0009517 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.1 0.7 GO:0071818 BAT3 complex(GO:0071818)
0.1 0.5 GO:0032807 DNA ligase IV complex(GO:0032807)
0.1 0.6 GO:0090397 stigma papilla(GO:0090397)
0.1 0.9 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.1 0.4 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.1 0.7 GO:0005828 kinetochore microtubule(GO:0005828)
0.1 1.8 GO:0009986 cell surface(GO:0009986)
0.1 0.7 GO:0005763 organellar small ribosomal subunit(GO:0000314) mitochondrial small ribosomal subunit(GO:0005763)
0.1 2.1 GO:0005871 kinesin complex(GO:0005871)
0.1 0.7 GO:0009538 photosystem I reaction center(GO:0009538)
0.1 0.2 GO:0033281 TAT protein transport complex(GO:0033281)
0.1 0.2 GO:0044614 nuclear pore cytoplasmic filaments(GO:0044614)
0.1 0.2 GO:0000930 gamma-tubulin complex(GO:0000930)
0.1 0.5 GO:0070652 HAUS complex(GO:0070652)
0.1 2.1 GO:0055028 cortical microtubule(GO:0055028)
0.1 0.6 GO:0000922 spindle pole(GO:0000922)
0.1 0.4 GO:0000796 condensin complex(GO:0000796)
0.1 0.2 GO:0030896 checkpoint clamp complex(GO:0030896)
0.1 0.2 GO:0097361 CIA complex(GO:0097361)
0.1 10.2 GO:0099503 secretory vesicle(GO:0099503)
0.1 0.2 GO:0045495 P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.1 0.8 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.1 0.5 GO:0071556 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.1 2.3 GO:0009543 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.1 0.3 GO:0005719 nuclear euchromatin(GO:0005719)
0.1 13.8 GO:0055035 plastid thylakoid membrane(GO:0055035)
0.1 0.3 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.0 0.3 GO:0005845 mRNA cap binding complex(GO:0005845)
0.0 1.3 GO:0031976 chloroplast thylakoid(GO:0009534) plastid thylakoid(GO:0031976)
0.0 0.3 GO:0030897 HOPS complex(GO:0030897)
0.0 0.1 GO:0030689 Noc complex(GO:0030689)
0.0 11.1 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.6 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.9 GO:0042651 thylakoid membrane(GO:0042651)
0.0 0.2 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778)
0.0 0.5 GO:0045298 tubulin complex(GO:0045298)
0.0 0.6 GO:0044815 DNA packaging complex(GO:0044815)
0.0 0.6 GO:0016324 apical plasma membrane(GO:0016324)
0.0 0.2 GO:0009346 citrate lyase complex(GO:0009346)
0.0 0.1 GO:0000777 condensed chromosome kinetochore(GO:0000777)
0.0 0.3 GO:0010168 ER body(GO:0010168)
0.0 0.2 GO:0044545 NSL complex(GO:0044545)
0.0 0.3 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.0 0.1 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.0 0.2 GO:0043073 germ cell nucleus(GO:0043073)
0.0 0.1 GO:0000938 GARP complex(GO:0000938)
0.0 2.7 GO:0005615 extracellular space(GO:0005615)
0.0 4.2 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.3 GO:0016459 myosin complex(GO:0016459)
0.0 5.6 GO:0005618 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 0.1 GO:0043076 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.0 12.6 GO:0009570 chloroplast stroma(GO:0009570)
0.0 0.6 GO:0010319 stromule(GO:0010319)
0.0 0.5 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 0.2 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.0 0.5 GO:0000419 DNA-directed RNA polymerase V complex(GO:0000419)
0.0 0.2 GO:0009574 preprophase band(GO:0009574)
0.0 37.0 GO:0005576 extracellular region(GO:0005576)
0.0 2.7 GO:0048046 apoplast(GO:0048046)
0.0 0.2 GO:0005685 U1 snRNP(GO:0005685)
0.0 0.1 GO:0005732 small nucleolar ribonucleoprotein complex(GO:0005732)
0.0 0.1 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 0.1 GO:0005787 signal peptidase complex(GO:0005787)
0.0 0.2 GO:0046540 U4/U6 x U5 tri-snRNP complex(GO:0046540)
0.0 0.4 GO:0009706 chloroplast inner membrane(GO:0009706)
0.0 0.2 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 1.1 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.7 GO:0016802 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.6 1.7 GO:0004830 tryptophan-tRNA ligase activity(GO:0004830)
0.5 1.4 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.4 5.4 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.4 2.1 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.4 3.1 GO:0019137 thioglucosidase activity(GO:0019137)
0.4 1.8 GO:0046715 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.4 1.1 GO:0015026 coreceptor activity(GO:0015026)
0.4 2.5 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.4 1.8 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.4 1.1 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.3 1.3 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.3 1.2 GO:0009784 transmembrane receptor histidine kinase activity(GO:0009784) transmembrane histidine kinase cytokinin receptor activity(GO:0009885)
0.3 0.8 GO:0005344 oxygen transporter activity(GO:0005344)
0.3 1.1 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.3 1.0 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.2 0.7 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.2 5.7 GO:0004565 beta-galactosidase activity(GO:0004565)
0.2 0.9 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.2 1.7 GO:0070035 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.2 0.6 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.2 0.8 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.2 6.5 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.2 1.6 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.2 4.4 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.2 0.8 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.2 0.9 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.2 1.5 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.2 2.4 GO:0033170 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.2 1.1 GO:0022829 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.2 0.9 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.2 1.4 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.2 0.7 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.2 0.7 GO:0004556 alpha-amylase activity(GO:0004556)
0.2 0.8 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.2 1.8 GO:0016161 beta-amylase activity(GO:0016161)
0.2 0.8 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.2 1.9 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.2 0.5 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.1 0.4 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.1 0.4 GO:0004462 lactoylglutathione lyase activity(GO:0004462)
0.1 0.7 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.1 0.4 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
0.1 1.7 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.1 0.6 GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.1 0.4 GO:0071771 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.1 0.4 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.1 0.7 GO:0015434 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.1 0.7 GO:0008705 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.1 3.6 GO:0008810 cellulase activity(GO:0008810)
0.1 2.7 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.1 0.4 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.1 0.5 GO:0051011 microtubule minus-end binding(GO:0051011)
0.1 2.3 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.1 0.7 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.1 0.8 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.1 1.6 GO:0008097 5S rRNA binding(GO:0008097)
0.1 0.4 GO:0004400 histidinol-phosphate transaminase activity(GO:0004400)
0.1 2.8 GO:0016168 chlorophyll binding(GO:0016168)
0.1 0.6 GO:0043015 gamma-tubulin binding(GO:0043015)
0.1 0.4 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.1 1.2 GO:0016721 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.1 0.8 GO:0009011 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.1 1.3 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.1 0.3 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.1 0.4 GO:0070402 NADPH binding(GO:0070402)
0.1 0.6 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.1 0.9 GO:0004312 fatty acid synthase activity(GO:0004312)
0.1 0.4 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.1 1.6 GO:0019706 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.1 1.2 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 0.3 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.1 0.8 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.1 1.8 GO:0008146 sulfotransferase activity(GO:0008146)
0.1 0.6 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.1 1.9 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.1 0.7 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.1 1.1 GO:0016844 strictosidine synthase activity(GO:0016844)
0.1 2.3 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.1 1.6 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.1 0.8 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.1 0.4 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.1 0.7 GO:0000400 four-way junction DNA binding(GO:0000400)
0.1 0.7 GO:0003906 DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906)
0.1 0.3 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.1 0.2 GO:0036009 protein-glutamine N-methyltransferase activity(GO:0036009) histone-glutamine methyltransferase activity(GO:1990259)
0.1 0.4 GO:0008184 glycogen phosphorylase activity(GO:0008184)
0.1 1.2 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.1 1.8 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.1 0.8 GO:0008061 chitin binding(GO:0008061)
0.1 1.9 GO:0000146 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.1 4.5 GO:0004650 polygalacturonase activity(GO:0004650)
0.1 0.7 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.1 1.3 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.4 GO:0003913 DNA photolyase activity(GO:0003913)
0.1 0.5 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.1 0.4 GO:0003909 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.1 0.2 GO:0000035 acyl binding(GO:0000035)
0.1 0.4 GO:0004766 spermidine synthase activity(GO:0004766)
0.1 1.6 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.1 1.9 GO:0005249 voltage-gated potassium channel activity(GO:0005249)
0.1 0.2 GO:0008936 nicotinamidase activity(GO:0008936)
0.1 0.5 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.1 0.3 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.1 2.3 GO:0016759 cellulose synthase activity(GO:0016759)
0.1 0.6 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.1 0.3 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.1 0.5 GO:0004096 catalase activity(GO:0004096)
0.1 0.4 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.1 1.3 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.1 0.2 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.1 0.4 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.0 0.2 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.0 0.5 GO:0033613 activating transcription factor binding(GO:0033613)
0.0 3.1 GO:0003777 microtubule motor activity(GO:0003777)
0.0 0.1 GO:0005034 osmosensor activity(GO:0005034)
0.0 0.4 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.0 0.1 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.0 0.2 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.0 1.9 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 0.2 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.0 1.6 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.0 1.4 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.8 GO:0000822 inositol hexakisphosphate binding(GO:0000822)
0.0 1.1 GO:0051787 misfolded protein binding(GO:0051787)
0.0 4.3 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.2 GO:0047215 indole-3-acetate beta-glucosyltransferase activity(GO:0047215)
0.0 0.5 GO:0008409 5'-3' exonuclease activity(GO:0008409)
0.0 0.3 GO:0016149 translation release factor activity, codon specific(GO:0016149)
0.0 0.3 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.0 0.2 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.0 2.2 GO:0043621 protein self-association(GO:0043621)
0.0 0.3 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.0 1.5 GO:0043022 ribosome binding(GO:0043022)
0.0 1.5 GO:0019843 rRNA binding(GO:0019843)
0.0 0.5 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.0 0.3 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 0.6 GO:0008175 tRNA methyltransferase activity(GO:0008175)
0.0 0.2 GO:0003785 actin monomer binding(GO:0003785)
0.0 0.1 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475)
0.0 0.4 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.0 1.1 GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor(GO:0016628)
0.0 0.1 GO:1990825 sequence-specific mRNA binding(GO:1990825)
0.0 0.1 GO:0047158 sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity(GO:0047158)
0.0 5.2 GO:0008134 transcription factor binding(GO:0008134)
0.0 1.5 GO:0004185 serine-type carboxypeptidase activity(GO:0004185) serine-type exopeptidase activity(GO:0070008)
0.0 0.5 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 0.5 GO:0000250 lanosterol synthase activity(GO:0000250) oxidosqualene cyclase activity(GO:0031559)
0.0 0.3 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.0 0.3 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.0 0.2 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.0 0.4 GO:0003725 double-stranded RNA binding(GO:0003725)
0.0 2.1 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.3 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.0 0.3 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.0 0.3 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.1 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.0 0.1 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.0 0.1 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.2 GO:0043733 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.0 0.1 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.0 0.4 GO:0008420 CTD phosphatase activity(GO:0008420)
0.0 0.9 GO:0008171 O-methyltransferase activity(GO:0008171)
0.0 0.3 GO:0008137 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0 0.2 GO:0031127 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.2 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.0 0.1 GO:1902388 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.0 0.3 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 0.2 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.0 1.1 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.1 GO:0031177 phosphopantetheine binding(GO:0031177)
0.0 0.2 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.0 0.1 GO:0001046 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.0 4.0 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.2 GO:0010428 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.0 0.2 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.0 1.3 GO:0030599 pectinesterase activity(GO:0030599)
0.0 0.1 GO:0001671 ATPase activator activity(GO:0001671)
0.0 0.2 GO:0046556 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.0 0.8 GO:0001871 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.0 0.1 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.0 1.0 GO:0008017 microtubule binding(GO:0008017)
0.0 0.2 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.0 0.2 GO:0016273 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.0 0.2 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.0 0.3 GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds(GO:0016799)
0.0 0.1 GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.6 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.0 0.0 GO:0009824 AMP dimethylallyltransferase activity(GO:0009824)
0.0 0.2 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.1 GO:0008327 methyl-CpG binding(GO:0008327)
0.0 0.7 GO:0003697 single-stranded DNA binding(GO:0003697)
0.0 0.1 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 0.4 GO:0033558 histone deacetylase activity(GO:0004407) protein deacetylase activity(GO:0033558)
0.0 0.1 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.0 0.1 GO:0070300 phosphatidic acid binding(GO:0070300)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 2.2 PID ATR PATHWAY ATR signaling pathway
0.2 0.7 PID P53 REGULATION PATHWAY p53 pathway
0.2 0.5 SA CASPASE CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.1 0.7 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.1 0.6 PID MTOR 4PATHWAY mTOR signaling pathway
0.1 0.6 PID FANCONI PATHWAY Fanconi anemia pathway
0.1 0.4 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.1 0.3 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.1 0.4 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.0 0.1 PID ATM PATHWAY ATM pathway
0.0 0.1 PID IL8 CXCR2 PATHWAY IL8- and CXCR2-mediated signaling events
0.0 0.1 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.0 0.1 SA G1 AND S PHASES Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition.
0.0 0.0 PID ERA GENOMIC PATHWAY Validated nuclear estrogen receptor alpha network
0.0 0.1 PID E2F PATHWAY E2F transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.7 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.2 0.6 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.2 0.6 REACTOME DEADENYLATION OF MRNA Genes involved in Deadenylation of mRNA
0.2 0.8 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.2 0.7 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.1 0.3 REACTOME REGULATION OF HYPOXIA INDUCIBLE FACTOR HIF BY OXYGEN Genes involved in Regulation of Hypoxia-inducible Factor (HIF) by Oxygen
0.1 1.2 REACTOME ACTIVATION OF ATR IN RESPONSE TO REPLICATION STRESS Genes involved in Activation of ATR in response to replication stress
0.1 0.4 REACTOME G1 S SPECIFIC TRANSCRIPTION Genes involved in G1/S-Specific Transcription
0.1 0.5 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.1 0.3 REACTOME TRANSCRIPTIONAL ACTIVITY OF SMAD2 SMAD3 SMAD4 HETEROTRIMER Genes involved in Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer
0.1 0.4 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.1 0.2 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.0 0.9 REACTOME ACTIVATION OF THE MRNA UPON BINDING OF THE CAP BINDING COMPLEX AND EIFS AND SUBSEQUENT BINDING TO 43S Genes involved in Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S
0.0 0.1 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.0 0.1 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.0 0.1 REACTOME SEMAPHORIN INTERACTIONS Genes involved in Semaphorin interactions
0.0 0.2 REACTOME MEIOTIC RECOMBINATION Genes involved in Meiotic Recombination
0.0 0.1 REACTOME DOUBLE STRAND BREAK REPAIR Genes involved in Double-Strand Break Repair