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GSE43616: Time-course of wild-type Arabidopsis leaf
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Results for AT5G04340
Z-value: 0.06
Transcription factors associated with AT5G04340
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
AT5G04340
|
AT5G04340 | 6 |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| ZAT6 | arTal_v1_Chr5_-_1217362_1217362 | 0.41 | 3.1e-02 | Click! |
Activity profile of AT5G04340 motif
Sorted Z-values of AT5G04340 motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| arTal_v1_Chr1_+_22034423_22034423 | 0.04 |
AT1G59870.1
|
PEN3
|
ABC-2 and Plant PDR ABC-type transporter family protein |
| arTal_v1_Chr3_-_8734562_8734624 | 0.04 |
AT3G24170.3
AT3G24170.1 |
GR1
|
glutathione-disulfide reductase |
| arTal_v1_Chr3_-_8734362_8734362 | 0.03 |
AT3G24170.2
|
GR1
|
glutathione-disulfide reductase |
| arTal_v1_Chr5_+_17734706_17734708 | 0.03 |
AT5G44070.1
AT5G44070.2 |
CAD1
|
phytochelatin synthase 1 (PCS1) |
| arTal_v1_Chr5_-_9671015_9671015 | 0.02 |
AT5G27380.1
|
GSH2
|
glutathione synthetase 2 |
| arTal_v1_Chr4_-_12107565_12107695 | 0.02 |
AT4G23100.1
AT4G23100.3 |
GSH1
|
glutamate-cysteine ligase |
| arTal_v1_Chr4_-_12107299_12107299 | 0.02 |
AT4G23100.2
|
GSH1
|
glutamate-cysteine ligase |
Network of associatons between targets according to the STRING database.
First level regulatory network of AT5G04340
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0010792 | DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002) |
| 0.0 | 0.1 | GO:0019184 | glutathione biosynthetic process(GO:0006750) nonribosomal peptide biosynthetic process(GO:0019184) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0070336 | Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336) |