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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G05550

Z-value: 4.42

Transcription factors associated with AT5G05550

Gene Symbol Gene ID Gene Info
AT5G05550
AT5G05550 sequence-specific DNA binding transcription factor

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT5G05550arTal_v1_Chr5_-_1640960_16409600.524.2e-03Click!

Activity profile of AT5G05550 motif

Sorted Z-values of AT5G05550 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr5_-_15825566_15825566 19.48 AT5G39520.1
AT5G39520
hypothetical protein (DUF1997)
arTal_v1_Chr3_-_20769324_20769410 15.87 AT3G55970.2
AT3G55970.1
JRG21
jasmonate-regulated gene 21
arTal_v1_Chr1_+_30150897_30151006 15.50 AT1G80160.3
AT1G80160.1
AT1G80160.2
GLYI7
Lactoylglutathione lyase / glyoxalase I family protein
arTal_v1_Chr4_-_9201643_9201643 15.44 AT4G16260.2
AT4G16260.1
AT4G16260
Glycosyl hydrolase superfamily protein
arTal_v1_Chr2_+_10906460_10906460 14.33 AT2G25625.2
AT2G25625
histone deacetylase-like protein
arTal_v1_Chr3_+_9208861_9208941 14.28 AT3G25290.1
AT3G25290.2
AT3G25290
Auxin-responsive family protein
arTal_v1_Chr2_+_10906215_10906215 13.83 AT2G25625.1
AT2G25625
histone deacetylase-like protein
arTal_v1_Chr4_+_6491017_6491017 13.44 AT4G10500.1
AT4G10500
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr5_-_15859911_15859911 13.43 AT5G39610.1
NAC6
NAC domain containing protein 6
arTal_v1_Chr1_-_30053936_30053936 13.35 AT1G79900.1
BAC2
Mitochondrial substrate carrier family protein
arTal_v1_Chr2_+_7606728_7606905 13.06 AT2G17500.2
AT2G17500.1
AT2G17500.3
AT2G17500.4
AT2G17500
Auxin efflux carrier family protein
arTal_v1_Chr4_-_12853845_12853845 13.03 AT4G25000.1
AMY1
alpha-amylase-like protein
arTal_v1_Chr3_-_2699257_2699257 12.86 AT3G08860.2
PYD4
PYRIMIDINE 4
arTal_v1_Chr5_+_3239617_3239617 12.81 AT5G10300.2
MES5
methyl esterase 5
arTal_v1_Chr4_+_15828228_15828228 12.75 AT4G32810.1
AT4G32810.2
CCD8
carotenoid cleavage dioxygenase 8
arTal_v1_Chr5_+_3239455_3239455 12.57 AT5G10300.1
MES5
methyl esterase 5
arTal_v1_Chr3_-_2699420_2699420 12.50 AT3G08860.1
PYD4
PYRIMIDINE 4
arTal_v1_Chr5_-_8659352_8659352 12.44 AT5G25110.1
CIPK25
CBL-interacting protein kinase 25
arTal_v1_Chr1_+_10892445_10892445 12.09 AT1G30700.1
AT1G30700
FAD-binding Berberine family protein
arTal_v1_Chr1_-_29622445_29622447 12.00 AT1G78780.1
AT1G78780.2
AT1G78780.4
AT1G78780
pathogenesis-related family protein
arTal_v1_Chr5_-_216773_216773 11.92 AT5G01550.1
LECRKA4.2
lectin receptor kinase a4.1
arTal_v1_Chr3_-_826585_826585 11.88 AT3G03470.1
CYP89A9
cytochrome P450, family 87, subfamily A, polypeptide 9
arTal_v1_Chr5_-_5033540_5033540 11.75 AT5G15500.2
AT5G15500.1
AT5G15500
Ankyrin repeat family protein
arTal_v1_Chr2_-_11980003_11980003 11.52 AT2G28110.1
FRA8
Exostosin family protein
arTal_v1_Chr5_+_5995479_5995479 11.47 AT5G18130.2
AT5G18130
transmembrane protein
arTal_v1_Chr5_-_23896702_23896702 11.45 AT5G59220.2
HAI1
PP2C protein (Clade A protein phosphatases type 2C)
arTal_v1_Chr3_-_4657723_4657723 11.42 AT3G14060.1
AT3G14060
hypothetical protein
arTal_v1_Chr5_+_5995323_5995323 11.40 AT5G18130.1
AT5G18130
transmembrane protein
arTal_v1_Chr3_+_9892791_9892791 11.39 AT3G26840.1
PES2
Esterase/lipase/thioesterase family protein
arTal_v1_Chr1_-_10356482_10356482 11.39 AT1G29640.1
AT1G29640
senescence regulator (Protein of unknown function, DUF584)
arTal_v1_Chr2_-_14541617_14541617 11.29 AT2G34500.1
CYP710A1
cytochrome P450, family 710, subfamily A, polypeptide 1
arTal_v1_Chr2_-_19166949_19166967 11.28 AT2G46680.2
AT2G46680.1
HB-7
homeobox 7
arTal_v1_Chr1_-_460696_460831 11.24 AT1G02310.1
AT1G02310.2
MAN1
Glycosyl hydrolase superfamily protein
arTal_v1_Chr5_-_23896939_23896939 11.21 AT5G59220.1
HAI1
PP2C protein (Clade A protein phosphatases type 2C)
arTal_v1_Chr5_-_26857086_26857086 10.93 AT5G67310.1
CYP81G1
cytochrome P450, family 81, subfamily G, polypeptide 1
arTal_v1_Chr1_+_26651840_26651840 10.91 AT1G70690.1
HWI1
Receptor-like protein kinase-related family protein
arTal_v1_Chr3_+_18634546_18634546 10.88 AT3G50260.1
CEJ1
cooperatively regulated by ethylene and jasmonate 1
arTal_v1_Chr3_+_19089026_19089026 10.71 AT3G51440.1
AT3G51440
Calcium-dependent phosphotriesterase superfamily protein
arTal_v1_Chr1_+_4794664_4794756 10.67 AT1G13990.1
AT1G13990.2
AT1G13990.3
AT1G13990
plant/protein
arTal_v1_Chr2_-_12149072_12149072 10.65 AT2G28400.1
AT2G28400
senescence regulator (Protein of unknown function, DUF584)
arTal_v1_Chr2_+_17251819_17251819 10.65 AT2G41380.1
AT2G41380
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr1_+_5389952_5389952 10.59 AT1G15670.1
AT1G15670
Galactose oxidase/kelch repeat superfamily protein
arTal_v1_Chr1_+_28177670_28177670 10.55 AT1G75040.1
PR5
pathogenesis-related protein 5
arTal_v1_Chr5_+_2938193_2938193 10.47 AT5G09440.1
EXL4
EXORDIUM like 4
arTal_v1_Chr1_-_27755297_27755297 10.45 AT1G73810.1
AT1G73810
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
arTal_v1_Chr5_-_9247540_9247540 10.44 AT5G26340.1
MSS1
Major facilitator superfamily protein
arTal_v1_Chr4_+_11269985_11270040 10.44 AT4G21120.1
AT4G21120.2
AAT1
amino acid transporter 1
arTal_v1_Chr3_-_3993886_3993886 10.30 AT3G12580.1
HSP70
heat shock protein 70
arTal_v1_Chr4_-_15903523_15903523 10.27 AT4G32940.1
GAMMA-VPE
gamma vacuolar processing enzyme
arTal_v1_Chr4_+_18409846_18409846 10.20 AT4G39670.1
AT4G39670
Glycolipid transfer protein (GLTP) family protein
arTal_v1_Chr1_-_3756998_3756998 10.18 AT1G11210.1
AT1G11210
cotton fiber protein, putative (DUF761)
arTal_v1_Chr3_-_10790553_10790553 10.10 AT3G28740.1
CYP81D11
Cytochrome P450 superfamily protein
arTal_v1_Chr5_-_3402389_3402389 10.09 AT5G10760.1
AT5G10760
Eukaryotic aspartyl protease family protein
arTal_v1_Chr1_-_4633299_4633299 10.09 AT1G13520.1
AT1G13520
hypothetical protein (DUF1262)
arTal_v1_Chr5_-_9000345_9000345 10.08 AT5G25820.1
AT5G25820
Exostosin family protein
arTal_v1_Chr3_-_23150606_23150606 9.99 AT3G62590.1
AT3G62590
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr5_-_2652535_2652535 9.97 AT5G08240.1
AT5G08240
transmembrane protein
arTal_v1_Chr4_-_15941493_15941493 9.94 AT4G33040.1
AT4G33040
Thioredoxin superfamily protein
arTal_v1_Chr2_-_11800928_11800928 9.93 AT2G27660.1
AT2G27660
Cysteine/Histidine-rich C1 domain family protein
arTal_v1_Chr4_+_7304323_7304323 9.90 AT4G12290.2
AT4G12290
Copper amine oxidase family protein
arTal_v1_Chr1_-_5645443_5645443 9.86 AT1G16510.1
AT1G16510
SAUR-like auxin-responsive protein family
arTal_v1_Chr2_+_12871984_12872134 9.85 AT2G30140.1
AT2G30140.2
UGT87A2
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr4_+_7303985_7303985 9.81 AT4G12290.1
AT4G12290
Copper amine oxidase family protein
arTal_v1_Chr3_-_4079627_4079627 9.80 AT3G12830.1
AT3G12830
SAUR-like auxin-responsive protein family
arTal_v1_Chr1_+_6100964_6101015 9.72 AT1G17745.1
AT1G17745.2
PGDH
D-3-phosphoglycerate dehydrogenase
arTal_v1_Chr1_-_25662276_25662276 9.67 AT1G68450.1
PDE337
VQ motif-containing protein
arTal_v1_Chr1_-_25238216_25238216 9.67 AT1G67360.2
AT1G67360
Rubber elongation factor protein (REF)
arTal_v1_Chr1_-_25238036_25238036 9.66 AT1G67360.1
AT1G67360
Rubber elongation factor protein (REF)
arTal_v1_Chr1_-_28920976_28920976 9.65 AT1G76960.1
AT1G76960
transmembrane protein
arTal_v1_Chr4_+_12121369_12121383 9.62 AT4G23140.1
AT4G23140.2
CRK6
cysteine-rich RLK (RECEPTOR-like protein kinase) 6
arTal_v1_Chr4_+_13653579_13653579 9.62 AT4G27260.1
WES1
Auxin-responsive GH3 family protein
arTal_v1_Chr1_-_23690807_23690807 9.54 AT1G63840.1
AT1G63840
RING/U-box superfamily protein
arTal_v1_Chr4_+_10398857_10398857 9.38 AT4G18980.1
AtS40-3
AtS40-3
arTal_v1_Chr2_+_12322386_12322386 9.38 AT2G28710.1
AT2G28710
C2H2-type zinc finger family protein
arTal_v1_Chr1_+_8164959_8164959 9.25 AT1G23040.3
AT1G23040.2
AT1G23040
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr3_-_10047453_10047453 9.25 AT3G27210.1
AT3G27210
hypothetical protein
arTal_v1_Chr1_-_7534927_7534927 9.18 AT1G21520.1
AT1G21520
hypothetical protein
arTal_v1_Chr4_+_12125664_12125664 9.18 AT4G23150.1
CRK7
cysteine-rich RLK (RECEPTOR-like protein kinase) 7
arTal_v1_Chr5_+_7138762_7138762 9.17 AT5G21020.2
AT5G21020
transmembrane protein
arTal_v1_Chr1_-_5338326_5338326 9.16 AT1G15520.1
AT1G15520.2
ABCG40
pleiotropic drug resistance 12
arTal_v1_Chr5_+_21984569_21984569 9.09 AT5G54165.1
AT5G54165
Avr9/Cf-9 rapidly elicited protein
arTal_v1_Chr2_+_18558885_18558938 9.08 AT2G44990.2
AT2G44990.3
AT2G44990.1
CCD7
carotenoid cleavage dioxygenase 7
arTal_v1_Chr4_+_17440177_17440177 9.08 AT4G36990.1
HSF4
heat shock factor 4
arTal_v1_Chr2_-_10585216_10585216 9.07 AT2G24850.1
TAT3
tyrosine aminotransferase 3
arTal_v1_Chr4_-_9368852_9368852 9.06 AT4G16640.1
AT4G16640
Matrixin family protein
arTal_v1_Chr1_-_27837443_27837443 9.05 AT1G74020.1
SS2
strictosidine synthase 2
arTal_v1_Chr1_+_12917070_12917070 9.02 AT1G35230.1
AGP5
arabinogalactan protein 5
arTal_v1_Chr5_-_5424615_5424749 9.02 AT5G16570.2
AT5G16570.1
GLN1%3B4
glutamine synthetase 1;4
arTal_v1_Chr1_-_23460884_23460884 8.96 AT1G63245.1
CLE14
CLAVATA3/ESR-RELATED 14
arTal_v1_Chr3_+_6097201_6097201 8.95 AT3G17820.1
GLN1.3
glutamine synthetase 1.3
arTal_v1_Chr3_-_18241341_18241341 8.92 AT3G49210.2
AT3G49210
O-acyltransferase (WSD1-like) family protein
arTal_v1_Chr1_+_28740540_28740540 8.91 AT1G76590.1
AT1G76590
PLATZ transcription factor family protein
arTal_v1_Chr5_+_15501126_15501184 8.84 AT5G38710.1
AT5G38710.2
AT5G38710
Methylenetetrahydrofolate reductase family protein
arTal_v1_Chr3_+_4346330_4346330 8.84 AT3G13380.1
BRL3
BRI1-like 3
arTal_v1_Chr5_+_26772644_26772644 8.78 AT5G67080.1
MAPKKK19
mitogen-activated protein kinase kinase kinase 19
arTal_v1_Chr5_-_5904380_5904380 8.77 AT5G17860.2
CAX7
calcium exchanger 7
arTal_v1_Chr2_+_16298110_16298110 8.77 AT2G39030.1
NATA1
Acyl-CoA N-acyltransferases (NAT) superfamily protein
arTal_v1_Chr4_+_17579618_17579618 8.76 AT4G37390.1
BRU6
Auxin-responsive GH3 family protein
arTal_v1_Chr3_-_19564195_19564195 8.74 AT3G52780.2
PAP20
Purple acid phosphatases superfamily protein
arTal_v1_Chr3_-_18241524_18241524 8.73 AT3G49210.1
AT3G49210
O-acyltransferase (WSD1-like) family protein
arTal_v1_Chr5_-_23281271_23281271 8.73 AT5G57480.1
AT5G57480
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr4_-_9393650_9393650 8.71 AT4G16690.1
MES16
methyl esterase 16
arTal_v1_Chr1_+_8164782_8164782 8.69 AT1G23040.1
AT1G23040
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr5_-_5904532_5904532 8.68 AT5G17860.1
CAX7
calcium exchanger 7
arTal_v1_Chr3_-_6788424_6788424 8.66 AT3G19550.1
AT3G19550
glutamate racemase
arTal_v1_Chr3_+_5243432_5243432 8.61 AT3G15510.1
NAC2
NAC domain containing protein 2
arTal_v1_Chr5_+_20764096_20764096 8.59 AT5G51070.1
ERD1
Clp ATPase
arTal_v1_Chr4_+_7239200_7239200 8.59 AT4G12080.1
AHL1
AT-hook motif nuclear-localized protein 1
arTal_v1_Chr3_-_19564350_19564350 8.58 AT3G52780.1
PAP20
Purple acid phosphatases superfamily protein
arTal_v1_Chr1_+_20617313_20617313 8.57 AT1G55265.1
AT1G55265
DUF538 family protein, putative (Protein of unknown function, DUF538)
arTal_v1_Chr5_+_24774980_24775028 8.57 AT5G61640.2
AT5G61640.1
PMSR1
peptidemethionine sulfoxide reductase 1
arTal_v1_Chr1_-_27834207_27834207 8.55 AT1G74010.1
AT1G74010
Calcium-dependent phosphotriesterase superfamily protein
arTal_v1_Chr5_-_1508927_1508927 8.54 AT5G05110.1
AT5G05110
Cystatin/monellin family protein
arTal_v1_Chr5_+_9038860_9038860 8.53 AT5G25910.1
RLP52
receptor like protein 52
arTal_v1_Chr5_-_3405571_3405571 8.51 AT5G10770.1
AT5G10770
Eukaryotic aspartyl protease family protein
arTal_v1_Chr3_-_8119490_8119490 8.49 AT3G22910.1
AT3G22910
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
arTal_v1_Chr4_+_2238370_2238373 8.49 AT4G04500.2
AT4G04500.3
AT4G04500.1
CRK37
cysteine-rich RLK (RECEPTOR-like protein kinase) 37
arTal_v1_Chr2_-_17806073_17806073 8.45 AT2G42790.1
CSY3
citrate synthase 3
arTal_v1_Chr1_-_977761_977911 8.44 AT1G03850.1
AT1G03850.2
AT1G03850.3
GRXS13
Glutaredoxin family protein
arTal_v1_Chr1_-_6101983_6101983 8.43 AT1G17744.1
AT1G17744
hypothetical protein
arTal_v1_Chr5_+_4271730_4271730 8.42 AT5G13330.1
Rap2.6L
related to AP2 6l
arTal_v1_Chr3_-_9471039_9471039 8.41 AT3G25882.1
NIMIN-2
NIM1-interacting 2
arTal_v1_Chr2_+_12767585_12767585 8.39 AT2G29950.1
ELF4-L1
ELF4-like 1
arTal_v1_Chr1_-_27119918_27119918 8.39 AT1G72070.1
AT1G72070
Chaperone DnaJ-domain superfamily protein
arTal_v1_Chr4_-_12345652_12345652 8.39 AT4G23700.2
CHX17
cation/H+ exchanger 17
arTal_v1_Chr3_-_19577141_19577141 8.38 AT3G52820.1
PAP22
purple acid phosphatase 22
arTal_v1_Chr5_+_523257_523257 8.36 AT5G02420.1
AT5G02420
cyclin-dependent kinase inhibitor SMR3-like protein
arTal_v1_Chr4_+_10818128_10818128 8.34 AT4G19970.1
AT4G19970
nucleotide-diphospho-sugar transferase family protein
arTal_v1_Chr4_-_16942060_16942060 8.33 AT4G35750.1
AT4G35750
SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
arTal_v1_Chr4_-_17571743_17571743 8.30 AT4G37370.1
CYP81D8
cytochrome P450, family 81, subfamily D, polypeptide 8
arTal_v1_Chr1_-_17266724_17266824 8.24 AT1G46768.3
AT1G46768.2
AT1G46768.1
RAP2.1
related to AP2 1
arTal_v1_Chr1_+_28296886_28296886 8.23 AT1G75400.1
AT1G75400
RING/U-box superfamily protein
arTal_v1_Chr5_+_19381519_19381519 8.23 AT5G47860.1
AT5G47860
Gut esterase (DUF1350)
arTal_v1_Chr2_-_6710856_6710856 8.22 AT2G15390.1
FUT4
fucosyltransferase 4
arTal_v1_Chr5_-_1580875_1580875 8.21 AT5G05340.1
PRX52
Peroxidase superfamily protein
arTal_v1_Chr5_-_14256284_14256284 8.18 AT5G36220.2
AT5G36220.1
CYP81D1
cytochrome p450 81d1
arTal_v1_Chr4_-_12346051_12346051 8.17 AT4G23700.1
CHX17
cation/H+ exchanger 17
arTal_v1_Chr2_-_6711156_6711156 8.15 AT2G15390.2
FUT4
fucosyltransferase 4
arTal_v1_Chr5_-_17994584_17994722 8.12 AT5G44610.3
AT5G44610.2
AT5G44610.1
MAP18
microtubule-associated protein 18
arTal_v1_Chr3_+_1635194_1635194 8.07 AT3G05630.1
PLDP2
phospholipase D P2
arTal_v1_Chr4_+_18530318_18530318 8.05 AT4G39955.1
AT4G39955
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr4_+_17631500_17631620 8.05 AT4G37520.1
AT4G37520.2
AT4G37520
Peroxidase superfamily protein
arTal_v1_Chr2_+_16303295_16303295 8.04 AT2G39050.1
EULS3
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr1_+_1469541_1469541 8.03 AT1G05100.1
MAPKKK18
mitogen-activated protein kinase kinase kinase 18
arTal_v1_Chr3_+_9685932_9685932 8.02 AT3G26470.1
AT3G26470
Powdery mildew resistance protein, RPW8 domain-containing protein
arTal_v1_Chr1_+_28291698_28291698 8.01 AT1G75390.1
AT1G75390.2
bZIP44
basic leucine-zipper 44
arTal_v1_Chr4_-_14393381_14393381 8.01 AT4G29190.1
OZF2
Zinc finger C-x8-C-x5-C-x3-H type family protein
arTal_v1_Chr1_+_20876440_20876440 7.99 AT1G55850.1
CSLE1
cellulose synthase like E1
arTal_v1_Chr1_+_26038905_26038905 7.97 AT1G69260.1
AFP1
ABI five binding protein
arTal_v1_Chr3_-_4654046_4654046 7.91 AT3G14050.1
RSH2
RELA/SPOT homolog 2
arTal_v1_Chr3_+_25355_25507 7.90 AT3G01080.2
AT3G01080.3
AT3G01080.1
WRKY58
WRKY DNA-binding protein 58
arTal_v1_Chr5_-_18804056_18804056 7.89 AT5G46350.1
WRKY8
WRKY DNA-binding protein 8
arTal_v1_Chr2_+_18577500_18577500 7.87 AT2G45040.1
AT2G45040
Matrixin family protein
arTal_v1_Chr1_-_7086873_7086873 7.86 AT1G20440.1
COR47
cold-regulated 47
arTal_v1_Chr5_-_16085213_16085213 7.84 AT5G40240.3
AT5G40240.1
UMAMIT40
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr1_-_2282828_2282828 7.84 AT1G07430.1
HAI2
highly ABA-induced PP2C protein 2
arTal_v1_Chr2_-_12618899_12618899 7.84 AT2G29420.1
GSTU7
glutathione S-transferase tau 7
arTal_v1_Chr4_-_11636720_11636720 7.84 AT4G21920.1
AT4G21920
hypothetical protein
arTal_v1_Chr2_-_8471644_8471644 7.83 AT2G19570.1
CDA1
cytidine deaminase 1
arTal_v1_Chr3_-_19643276_19643282 7.82 AT3G52970.1
AT3G52970.2
CYP76G1
cytochrome P450, family 76, subfamily G, polypeptide 1
arTal_v1_Chr1_-_23019494_23019494 7.81 AT1G62300.1
WRKY6
WRKY family transcription factor
arTal_v1_Chr2_-_275002_275002 7.80 AT2G01610.1
AT2G01610
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr1_-_28318362_28318375 7.79 AT1G75450.1
AT1G75450.2
CKX5
cytokinin oxidase 5
arTal_v1_Chr1_+_23168767_23168767 7.76 AT1G62570.1
FMO GS-OX4
flavin-monooxygenase glucosinolate S-oxygenase 4
arTal_v1_Chr3_+_20736508_20736512 7.75 AT3G55880.1
AT3G55880.3
AT3G55880.2
AT3G55880.4
SUE4
Alpha/beta hydrolase related protein
arTal_v1_Chr5_+_26416126_26416126 7.74 AT5G66052.1
AT5G66052
transmembrane protein
arTal_v1_Chr1_-_24362054_24362054 7.72 AT1G65520.1
ECI1
delta(3), delta(2)-enoyl CoA isomerase 1
arTal_v1_Chr3_+_815550_815550 7.71 AT3G03440.1
AT3G03440
ARM repeat superfamily protein
arTal_v1_Chr4_-_11971203_11971203 7.65 AT4G22780.1
ACR7
ACT domain repeat 7
arTal_v1_Chr5_-_8547822_8547906 7.65 AT5G24870.2
AT5G24870.1
AT5G24870
RING/U-box superfamily protein
arTal_v1_Chr2_-_13929763_13929763 7.65 AT2G32830.1
PHT1%3B5
phosphate transporter 1;5
arTal_v1_Chr4_+_9171280_9171280 7.63 AT4G16190.1
AT4G16190
Papain family cysteine protease
arTal_v1_Chr4_-_11971357_11971357 7.60 AT4G22780.2
ACR7
ACT domain repeat 7
arTal_v1_Chr4_+_12977192_12977341 7.59 AT4G25390.1
AT4G25390.2
AT4G25390
Protein kinase superfamily protein
arTal_v1_Chr2_+_16997078_16997177 7.59 AT2G40740.3
AT2G40740.2
AT2G40740.1
WRKY55
WRKY DNA-binding protein 55
arTal_v1_Chr1_+_4416315_4416315 7.59 AT1G12940.1
NRT2.5
nitrate transporter2.5
arTal_v1_Chr3_-_19165322_19165322 7.56 AT3G51660.1
AT3G51660
Tautomerase/MIF superfamily protein
arTal_v1_Chr1_-_23818481_23818481 7.53 AT1G64170.1
CHX16
cation/H+ exchanger 16
arTal_v1_Chr1_-_9935264_9935440 7.53 AT1G28330.3
AT1G28330.2
AT1G28330.4
AT1G28330.1
AT1G28330.6
AT1G28330.5
DYL1
dormancy-associated protein-like 1
arTal_v1_Chr4_+_12314025_12314025 7.52 AT4G23610.1
AT4G23610
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
arTal_v1_Chr3_-_21303230_21303230 7.50 AT3G57540.1
AT3G57540
Remorin family protein
arTal_v1_Chr2_-_13613573_13613728 7.49 AT2G31990.1
AT2G31990.3
AT2G31990.2
AT2G31990
Exostosin family protein
arTal_v1_Chr3_+_6093990_6093990 7.49 AT3G17810.1
PYD1
pyrimidine 1
arTal_v1_Chr3_-_20361560_20361560 7.48 AT3G54950.1
pPLAIIIbeta
patatin-like protein 6
arTal_v1_Chr4_-_437591_437605 7.43 AT4G01010.1
AT4G01010.2
CNGC13
cyclic nucleotide-gated channel 13
arTal_v1_Chr1_-_18124289_18124289 7.42 AT1G49000.1
AT1G49000
transmembrane protein
arTal_v1_Chr1_+_3945584_3945584 7.39 AT1G11700.1
AT1G11700
senescence regulator (Protein of unknown function, DUF584)
arTal_v1_Chr2_+_14685170_14685170 7.38 AT2G34810.1
AT2G34810
FAD-binding Berberine family protein
arTal_v1_Chr1_+_11774484_11774484 7.36 AT1G32560.1
AtLEA4-1
Late embryogenesis abundant protein, group 1 protein
arTal_v1_Chr4_-_8870801_8870979 7.36 AT4G15530.7
AT4G15530.6
AT4G15530.5
AT4G15530.3
AT4G15530.4
AT4G15530.1
PPDK
pyruvate orthophosphate dikinase
arTal_v1_Chr4_+_14348637_14348637 7.35 AT4G29110.1
AT4G29110
cotton fiber protein
arTal_v1_Chr3_-_1678968_1679061 7.34 AT3G05690.2
AT3G05690.1
NF-YA2
nuclear factor Y, subunit A2
arTal_v1_Chr1_+_22198266_22198266 7.33 AT1G60190.1
PUB19
ARM repeat superfamily protein
arTal_v1_Chr5_+_25210301_25210301 7.27 AT5G62770.1
AT5G62770
membrane-associated kinase regulator, putative (DUF1645)
arTal_v1_Chr2_+_9248525_9248573 7.26 AT2G21620.1
AT2G21620.2
RD2
Adenine nucleotide alpha hydrolases-like superfamily protein
arTal_v1_Chr1_+_6515373_6515373 7.23 AT1G18870.1
AT1G18870.3
ICS2
isochorismate synthase 2
arTal_v1_Chr3_+_4934330_4934330 7.23 AT3G14680.1
CYP72A14
cytochrome P450, family 72, subfamily A, polypeptide 14
arTal_v1_Chr2_-_17263017_17263017 7.22 AT2G41410.1
AT2G41410
Calcium-binding EF-hand family protein
arTal_v1_Chr5_-_8547423_8547423 7.18 AT5G24870.3
AT5G24870
RING/U-box superfamily protein
arTal_v1_Chr1_+_30135024_30135024 7.18 AT1G80110.1
PP2-B11
phloem protein 2-B11

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G05550

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
7.3 21.8 GO:0016118 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
6.3 25.4 GO:0016139 glycoside catabolic process(GO:0016139)
5.7 22.6 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
5.6 5.6 GO:0033591 response to L-ascorbic acid(GO:0033591)
5.2 15.5 GO:0015802 basic amino acid transport(GO:0015802)
5.1 15.4 GO:0002215 defense response to nematode(GO:0002215)
4.3 13.0 GO:0044259 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
4.0 4.0 GO:0019336 phenol-containing compound catabolic process(GO:0019336)
3.8 18.8 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
3.6 3.6 GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043162)
3.5 14.0 GO:1902457 negative regulation of stomatal opening(GO:1902457)
3.3 13.4 GO:0015697 quaternary ammonium group transport(GO:0015697)
3.2 12.8 GO:0080168 abscisic acid transport(GO:0080168)
3.2 9.5 GO:0016540 protein autoprocessing(GO:0016540)
3.1 3.1 GO:0060967 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
3.0 11.8 GO:0048838 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
2.7 19.1 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
2.7 8.1 GO:0031115 negative regulation of microtubule polymerization(GO:0031115)
2.7 16.1 GO:0043066 apoptotic process(GO:0006915) regulation of apoptotic process(GO:0042981) negative regulation of apoptotic process(GO:0043066)
2.6 13.1 GO:0051090 regulation of sequence-specific DNA binding transcription factor activity(GO:0051090)
2.6 10.2 GO:0016099 monoterpenoid metabolic process(GO:0016098) monoterpenoid biosynthetic process(GO:0016099)
2.5 20.0 GO:0046473 phosphatidic acid metabolic process(GO:0046473)
2.5 7.5 GO:0006210 thymine catabolic process(GO:0006210) uracil catabolic process(GO:0006212) beta-alanine biosynthetic process(GO:0019483) thymine metabolic process(GO:0019859)
2.4 7.2 GO:0016237 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) single-organism membrane invagination(GO:1902534)
2.3 6.8 GO:0080040 positive regulation of cellular response to phosphate starvation(GO:0080040)
2.2 38.2 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
2.2 6.7 GO:0031506 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506)
2.2 2.2 GO:0075733 intracellular transport of virus(GO:0075733)
2.2 2.2 GO:0009745 sucrose mediated signaling(GO:0009745)
2.2 6.5 GO:1902000 homogentisate metabolic process(GO:1901999) homogentisate catabolic process(GO:1902000)
2.1 6.4 GO:0030242 pexophagy(GO:0030242)
2.1 6.3 GO:2000693 positive regulation of seed maturation(GO:2000693)
2.1 20.6 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
2.0 8.2 GO:0010185 regulation of cellular defense response(GO:0010185)
2.0 6.0 GO:0046203 spermidine catabolic process(GO:0046203)
2.0 7.8 GO:0080029 cellular response to boron-containing substance levels(GO:0080029)
1.9 7.4 GO:0010507 negative regulation of autophagy(GO:0010507)
1.8 16.5 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
1.8 10.9 GO:0006624 vacuolar protein processing(GO:0006624)
1.8 12.6 GO:0035434 copper ion transmembrane transport(GO:0035434)
1.8 12.6 GO:0032957 inositol trisphosphate metabolic process(GO:0032957)
1.8 5.3 GO:1902066 regulation of cell wall pectin metabolic process(GO:1902066)
1.8 8.8 GO:0006564 L-serine biosynthetic process(GO:0006564)
1.7 5.2 GO:0006493 protein O-linked glycosylation(GO:0006493)
1.7 11.7 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
1.7 8.3 GO:0046218 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
1.6 4.9 GO:0061014 positive regulation of mRNA catabolic process(GO:0061014)
1.6 9.9 GO:0015785 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
1.6 9.7 GO:0046113 purine nucleobase catabolic process(GO:0006145) nucleobase catabolic process(GO:0046113)
1.6 15.8 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
1.6 12.5 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
1.5 4.5 GO:1900424 regulation of defense response to bacterium(GO:1900424)
1.5 4.5 GO:0071422 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
1.5 4.4 GO:0015696 ammonium transport(GO:0015696)
1.5 5.9 GO:0070509 calcium ion import(GO:0070509)
1.4 13.0 GO:0042357 thiamine diphosphate biosynthetic process(GO:0009229) thiamine diphosphate metabolic process(GO:0042357)
1.4 7.1 GO:0019323 pentose catabolic process(GO:0019323)
1.4 4.3 GO:0051938 L-amino acid import(GO:0043092) L-glutamate import(GO:0051938)
1.4 5.7 GO:0046786 viral replication complex formation and maintenance(GO:0046786)
1.4 4.1 GO:0034486 vacuolar transmembrane transport(GO:0034486)
1.4 12.3 GO:0010230 alternative respiration(GO:0010230)
1.4 23.0 GO:0000266 mitochondrial fission(GO:0000266)
1.4 5.4 GO:0019499 cyanide metabolic process(GO:0019499)
1.4 4.1 GO:0045332 phospholipid translocation(GO:0045332)
1.3 9.4 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
1.3 4.0 GO:0048281 inflorescence morphogenesis(GO:0048281)
1.3 4.0 GO:0071569 protein ufmylation(GO:0071569)
1.3 5.3 GO:0055073 cadmium ion homeostasis(GO:0055073)
1.3 6.7 GO:1900367 positive regulation of defense response to insect(GO:1900367)
1.3 7.9 GO:0010148 transpiration(GO:0010148)
1.3 3.9 GO:1903725 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0010322) regulation of phospholipid biosynthetic process(GO:0071071) regulation of phospholipid metabolic process(GO:1903725)
1.3 5.2 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
1.3 7.8 GO:0046087 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
1.3 3.9 GO:0032979 protein insertion into membrane from inner side(GO:0032978) protein insertion into mitochondrial membrane from inner side(GO:0032979) protein insertion into mitochondrial membrane(GO:0051204)
1.3 6.4 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
1.3 3.8 GO:0046416 D-amino acid metabolic process(GO:0046416)
1.3 5.0 GO:0006527 arginine catabolic process(GO:0006527)
1.3 3.8 GO:0051865 protein autoubiquitination(GO:0051865)
1.3 5.0 GO:0048480 stigma development(GO:0048480)
1.2 3.7 GO:0010246 rhamnogalacturonan I biosynthetic process(GO:0010246)
1.2 5.0 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
1.2 3.7 GO:0018065 protein-cofactor linkage(GO:0018065)
1.2 1.2 GO:0042178 xenobiotic catabolic process(GO:0042178)
1.2 7.3 GO:0034035 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
1.2 3.6 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
1.2 10.9 GO:0070301 cellular response to hydrogen peroxide(GO:0070301)
1.2 7.2 GO:0009970 cellular response to sulfate starvation(GO:0009970)
1.2 2.4 GO:0046085 adenosine metabolic process(GO:0046085)
1.2 4.8 GO:0010107 potassium ion import(GO:0010107)
1.2 6.0 GO:0033617 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
1.2 6.0 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
1.2 8.3 GO:0006542 glutamine biosynthetic process(GO:0006542)
1.2 13.0 GO:0002757 pattern recognition receptor signaling pathway(GO:0002221) immune response-activating signal transduction(GO:0002757) innate immune response-activating signal transduction(GO:0002758)
1.2 7.1 GO:0006878 cellular copper ion homeostasis(GO:0006878)
1.2 48.1 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
1.2 4.7 GO:0042256 mature ribosome assembly(GO:0042256)
1.2 2.3 GO:0051291 protein heterooligomerization(GO:0051291)
1.2 4.7 GO:0035305 negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
1.2 3.5 GO:1902586 transport of virus in host, cell to cell(GO:0046740) multi-organism intercellular transport(GO:1902586)
1.2 6.9 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
1.2 3.5 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
1.2 5.8 GO:1902065 response to L-glutamate(GO:1902065)
1.1 3.4 GO:0006884 cell volume homeostasis(GO:0006884)
1.1 11.4 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
1.1 14.8 GO:0048317 seed morphogenesis(GO:0048317)
1.1 44.0 GO:0043562 cellular response to nitrogen levels(GO:0043562)
1.1 5.6 GO:0009268 response to pH(GO:0009268)
1.1 4.4 GO:0051289 protein homotetramerization(GO:0051289)
1.1 25.4 GO:0002238 response to molecule of fungal origin(GO:0002238)
1.1 3.3 GO:0044090 positive regulation of vacuole organization(GO:0044090)
1.1 5.5 GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
1.1 8.6 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
1.1 51.9 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
1.0 1.0 GO:0018377 N-terminal protein lipidation(GO:0006498) N-terminal protein myristoylation(GO:0006499) protein myristoylation(GO:0018377)
1.0 3.1 GO:0043649 dicarboxylic acid catabolic process(GO:0043649)
1.0 5.2 GO:0010120 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
1.0 4.2 GO:0046794 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) transport of virus(GO:0046794) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
1.0 6.2 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
1.0 3.1 GO:0042787 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
1.0 10.3 GO:0015749 monosaccharide transport(GO:0015749)
1.0 4.1 GO:0090065 regulation of production of siRNA involved in RNA interference(GO:0090065)
1.0 1.9 GO:2000008 regulation of protein localization to cell surface(GO:2000008)
1.0 5.7 GO:0043617 cellular response to sucrose starvation(GO:0043617)
1.0 2.9 GO:2000029 regulation of proanthocyanidin biosynthetic process(GO:2000029)
0.9 4.7 GO:0015940 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.9 7.5 GO:0009061 anaerobic respiration(GO:0009061)
0.9 13.9 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.9 6.4 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.9 16.4 GO:0009065 glutamine family amino acid catabolic process(GO:0009065)
0.9 2.7 GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.9 2.7 GO:0052314 toxin biosynthetic process(GO:0009403) indole phytoalexin biosynthetic process(GO:0009700) indole phytoalexin metabolic process(GO:0046217) phytoalexin metabolic process(GO:0052314) phytoalexin biosynthetic process(GO:0052315)
0.9 6.3 GO:0090356 negative regulation of auxin metabolic process(GO:0090356)
0.9 0.9 GO:0042219 cellular modified amino acid catabolic process(GO:0042219)
0.9 2.7 GO:0030322 stabilization of membrane potential(GO:0030322)
0.9 9.7 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.9 5.3 GO:0005513 detection of calcium ion(GO:0005513)
0.9 2.7 GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress(GO:0043618)
0.9 17.6 GO:0030968 endoplasmic reticulum unfolded protein response(GO:0030968)
0.9 6.1 GO:0060866 leaf abscission(GO:0060866)
0.9 6.1 GO:0006072 glycerol-3-phosphate metabolic process(GO:0006072)
0.9 4.3 GO:0019433 triglyceride catabolic process(GO:0019433)
0.9 3.5 GO:0002230 positive regulation of defense response to virus by host(GO:0002230)
0.9 6.0 GO:0045898 regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045898) positive regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045899)
0.9 2.6 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.9 38.6 GO:0072665 protein targeting to vacuole(GO:0006623) protein localization to vacuole(GO:0072665) establishment of protein localization to vacuole(GO:0072666)
0.9 6.8 GO:0006121 mitochondrial electron transport, succinate to ubiquinone(GO:0006121)
0.8 1.7 GO:0015692 lead ion transport(GO:0015692)
0.8 13.5 GO:0015833 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.8 5.0 GO:0051775 response to redox state(GO:0051775)
0.8 3.4 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.8 10.9 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.8 23.4 GO:0060548 negative regulation of cell death(GO:0060548)
0.8 2.5 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.8 3.3 GO:0042040 molybdenum incorporation into molybdenum-molybdopterin complex(GO:0018315) metal incorporation into metallo-molybdopterin complex(GO:0042040)
0.8 2.5 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.8 4.9 GO:0009303 rRNA transcription(GO:0009303)
0.8 2.5 GO:0022610 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.8 2.4 GO:0045857 regulation of molecular function, epigenetic(GO:0040030) negative regulation of molecular function, epigenetic(GO:0045857)
0.8 3.2 GO:0060862 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.8 5.7 GO:0006285 base-excision repair, AP site formation(GO:0006285)
0.8 29.9 GO:0009062 fatty acid catabolic process(GO:0009062)
0.8 4.0 GO:0000972 transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000972)
0.8 2.4 GO:0006513 protein monoubiquitination(GO:0006513)
0.8 3.2 GO:0010366 negative regulation of ethylene biosynthetic process(GO:0010366) negative regulation of sulfur amino acid metabolic process(GO:0031336) negative regulation of cellular amine metabolic process(GO:0033239) negative regulation of cellular amino acid metabolic process(GO:0045763) negative regulation of sulfur metabolic process(GO:0051175) negative regulation of olefin metabolic process(GO:1900909) negative regulation of olefin biosynthetic process(GO:1900912)
0.8 2.4 GO:0061641 CENP-A containing nucleosome assembly(GO:0034080) CENP-A containing chromatin organization(GO:0061641)
0.8 23.0 GO:0031537 regulation of anthocyanin metabolic process(GO:0031537)
0.8 12.2 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.8 4.5 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.8 2.3 GO:0006620 posttranslational protein targeting to membrane(GO:0006620)
0.7 1.5 GO:0017145 stem cell division(GO:0017145)
0.7 2.2 GO:0043982 histone H4-K8 acetylation(GO:0043982)
0.7 4.5 GO:0070550 establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
0.7 3.7 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.7 4.4 GO:0009726 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.7 4.4 GO:0019509 L-methionine biosynthetic process from methylthioadenosine(GO:0019509) amino acid salvage(GO:0043102) L-methionine salvage(GO:0071267)
0.7 7.4 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.7 23.3 GO:0010941 regulation of cell death(GO:0010941)
0.7 4.4 GO:2000105 positive regulation of DNA endoreduplication(GO:0032877) positive regulation of DNA-dependent DNA replication(GO:2000105)
0.7 13.7 GO:0006814 sodium ion transport(GO:0006814)
0.7 3.6 GO:0006552 leucine catabolic process(GO:0006552)
0.7 8.6 GO:0051046 regulation of exocytosis(GO:0017157) regulation of secretion(GO:0051046) regulation of secretion by cell(GO:1903530)
0.7 1.4 GO:0046208 spermine catabolic process(GO:0046208)
0.7 4.2 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.7 16.1 GO:0090630 activation of GTPase activity(GO:0090630)
0.7 2.8 GO:0030002 cellular anion homeostasis(GO:0030002)
0.7 4.2 GO:0016559 peroxisome fission(GO:0016559)
0.7 2.8 GO:0070898 RNA polymerase III transcriptional preinitiation complex assembly(GO:0070898)
0.7 2.8 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.7 2.8 GO:0010219 regulation of vernalization response(GO:0010219)
0.7 2.7 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.7 2.0 GO:0000730 DNA recombinase assembly(GO:0000730)
0.7 1.4 GO:0006777 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.7 3.4 GO:0070525 tRNA threonylcarbamoyladenosine metabolic process(GO:0070525)
0.7 4.7 GO:0046822 regulation of nucleocytoplasmic transport(GO:0046822)
0.7 2.0 GO:0006348 chromatin silencing at telomere(GO:0006348)
0.7 4.0 GO:0034227 tRNA thio-modification(GO:0034227)
0.7 8.7 GO:1902074 response to salt(GO:1902074)
0.7 0.7 GO:2000011 regulation of adaxial/abaxial pattern formation(GO:2000011)
0.7 0.7 GO:2000068 regulation of defense response to insect(GO:2000068)
0.7 6.6 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.7 5.9 GO:0006625 protein targeting to peroxisome(GO:0006625) protein localization to peroxisome(GO:0072662) establishment of protein localization to peroxisome(GO:0072663)
0.7 5.9 GO:0033320 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.7 2.6 GO:0043461 proton-transporting ATP synthase complex assembly(GO:0043461) proton-transporting ATP synthase complex biogenesis(GO:0070272)
0.7 5.2 GO:0010264 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.6 1.9 GO:0048572 short-day photoperiodism(GO:0048572) short-day photoperiodism, flowering(GO:0048575)
0.6 3.2 GO:0048530 fruit morphogenesis(GO:0048530)
0.6 2.6 GO:0030259 lipid glycosylation(GO:0030259)
0.6 14.0 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.6 1.9 GO:0071494 cellular response to UV-C(GO:0071494)
0.6 5.0 GO:0050898 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.6 16.3 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.6 3.1 GO:0046039 GTP biosynthetic process(GO:0006183) GTP metabolic process(GO:0046039) guanosine-containing compound biosynthetic process(GO:1901070)
0.6 10.6 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.6 5.0 GO:0070070 proton-transporting V-type ATPase complex assembly(GO:0070070) proton-transporting two-sector ATPase complex assembly(GO:0070071)
0.6 34.3 GO:0009631 cold acclimation(GO:0009631)
0.6 9.3 GO:0009649 entrainment of circadian clock(GO:0009649)
0.6 23.5 GO:0000122 negative regulation of transcription from RNA polymerase II promoter(GO:0000122)
0.6 2.5 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.6 10.9 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.6 6.0 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.6 3.0 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.6 2.4 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.6 2.4 GO:0055078 sodium ion homeostasis(GO:0055078)
0.6 4.8 GO:0007029 endoplasmic reticulum organization(GO:0007029)
0.6 7.8 GO:0009750 response to fructose(GO:0009750)
0.6 7.1 GO:0006574 valine catabolic process(GO:0006574)
0.6 1.2 GO:0032527 protein exit from endoplasmic reticulum(GO:0032527)
0.6 5.3 GO:0046512 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.6 1.2 GO:0071398 response to fatty acid(GO:0070542) cellular response to fatty acid(GO:0071398)
0.6 1.2 GO:0000187 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.6 1.7 GO:0034508 centromere complex assembly(GO:0034508)
0.6 5.0 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.6 5.6 GO:0055083 phosphate ion homeostasis(GO:0055062) monovalent inorganic anion homeostasis(GO:0055083) trivalent inorganic anion homeostasis(GO:0072506)
0.6 1.7 GO:0042060 RNA (guanine-N7)-methylation(GO:0036265) wound healing(GO:0042060) rRNA (guanine-N7)-methylation(GO:0070476) callus formation(GO:1990110)
0.6 3.9 GO:0031119 tRNA pseudouridine synthesis(GO:0031119)
0.6 5.6 GO:0010044 response to aluminum ion(GO:0010044)
0.6 2.8 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.6 3.3 GO:0070370 cellular heat acclimation(GO:0070370)
0.6 1.7 GO:0010452 histone H3-K36 methylation(GO:0010452)
0.5 2.7 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.5 1.6 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.5 12.0 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.5 8.2 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.5 1.6 GO:0034247 snoRNA splicing(GO:0034247)
0.5 1.6 GO:0048446 petal morphogenesis(GO:0048446)
0.5 7.0 GO:0002253 activation of innate immune response(GO:0002218) activation of immune response(GO:0002253)
0.5 1.1 GO:0035264 multicellular organism growth(GO:0035264)
0.5 4.3 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.5 2.7 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.5 23.0 GO:0009626 plant-type hypersensitive response(GO:0009626)
0.5 7.4 GO:0009688 abscisic acid biosynthetic process(GO:0009688) apocarotenoid biosynthetic process(GO:0043289) tertiary alcohol biosynthetic process(GO:1902645)
0.5 1.6 GO:0033120 positive regulation of RNA splicing(GO:0033120)
0.5 7.4 GO:0002213 defense response to insect(GO:0002213)
0.5 1.6 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.5 20.2 GO:2000028 regulation of photoperiodism, flowering(GO:2000028)
0.5 1.5 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.5 1.0 GO:0006296 nucleotide-excision repair, DNA incision, 5'-to lesion(GO:0006296)
0.5 12.6 GO:0007030 Golgi organization(GO:0007030)
0.5 13.9 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.5 6.4 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.5 2.4 GO:0060919 auxin influx(GO:0060919)
0.5 6.8 GO:0019374 galactolipid metabolic process(GO:0019374)
0.5 6.8 GO:0043248 proteasome assembly(GO:0043248)
0.5 2.9 GO:0010187 negative regulation of seed germination(GO:0010187)
0.5 11.5 GO:0030433 ER-associated ubiquitin-dependent protein catabolic process(GO:0030433) ERAD pathway(GO:0036503)
0.5 1.9 GO:0055070 copper ion homeostasis(GO:0055070)
0.5 4.3 GO:0080144 amino acid homeostasis(GO:0080144)
0.5 1.4 GO:0090143 nucleoid organization(GO:0090143)
0.5 5.5 GO:0031349 positive regulation of defense response(GO:0031349)
0.5 3.6 GO:0009819 drought recovery(GO:0009819)
0.4 1.3 GO:0051601 exocyst localization(GO:0051601)
0.4 1.3 GO:0007099 centrosome cycle(GO:0007098) centriole replication(GO:0007099) centrosome organization(GO:0051297) centrosome duplication(GO:0051298) centriole assembly(GO:0098534)
0.4 1.3 GO:0034551 respiratory chain complex III assembly(GO:0017062) mitochondrial respiratory chain complex III assembly(GO:0034551) mitochondrial respiratory chain complex III biogenesis(GO:0097033)
0.4 6.6 GO:0010227 floral organ abscission(GO:0010227)
0.4 1.3 GO:0015800 acidic amino acid transport(GO:0015800)
0.4 4.0 GO:1902170 cellular response to reactive nitrogen species(GO:1902170)
0.4 1.3 GO:0006747 FAD biosynthetic process(GO:0006747) flavin adenine dinucleotide biosynthetic process(GO:0072388)
0.4 1.3 GO:0032786 positive regulation of DNA-templated transcription, elongation(GO:0032786)
0.4 1.7 GO:0006561 proline metabolic process(GO:0006560) proline biosynthetic process(GO:0006561) L-proline biosynthetic process(GO:0055129)
0.4 1.7 GO:1902914 regulation of protein polyubiquitination(GO:1902914) positive regulation of protein polyubiquitination(GO:1902916)
0.4 4.6 GO:0016553 base conversion or substitution editing(GO:0016553) cytidine to uridine editing(GO:0016554)
0.4 18.6 GO:0045732 positive regulation of protein catabolic process(GO:0045732)
0.4 0.4 GO:0032351 negative regulation of hormone metabolic process(GO:0032351)
0.4 3.3 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.4 4.1 GO:0009816 defense response to bacterium, incompatible interaction(GO:0009816)
0.4 2.4 GO:1900036 positive regulation of cellular response to heat(GO:1900036)
0.4 1.2 GO:1901976 regulation of cell cycle checkpoint(GO:1901976)
0.4 2.4 GO:0048207 regulation of COPII vesicle coating(GO:0003400) vesicle targeting, rough ER to cis-Golgi(GO:0048207) COPII vesicle coating(GO:0048208) regulation of ER to Golgi vesicle-mediated transport(GO:0060628) regulation of ER to Golgi vesicle-mediated transport by GTP hydrolysis(GO:0090113)
0.4 3.2 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.4 16.3 GO:0009744 response to sucrose(GO:0009744)
0.4 5.2 GO:0006338 chromatin remodeling(GO:0006338)
0.4 2.4 GO:0006368 transcription elongation from RNA polymerase II promoter(GO:0006368)
0.4 4.7 GO:0015996 chlorophyll catabolic process(GO:0015996) pigment catabolic process(GO:0046149)
0.4 0.8 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.4 10.9 GO:0006829 zinc II ion transport(GO:0006829)
0.4 0.8 GO:0019368 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.4 1.6 GO:0060149 negative regulation of posttranscriptional gene silencing(GO:0060149)
0.4 1.2 GO:0072337 modified amino acid transport(GO:0072337)
0.4 20.8 GO:0000380 alternative mRNA splicing, via spliceosome(GO:0000380)
0.4 7.7 GO:0055046 microgametogenesis(GO:0055046)
0.4 3.0 GO:0033523 histone H2B ubiquitination(GO:0033523)
0.4 1.1 GO:0035019 somatic stem cell population maintenance(GO:0035019)
0.4 3.6 GO:0009292 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.4 1.8 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.4 8.3 GO:0046219 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.4 3.3 GO:0043171 peptide catabolic process(GO:0043171)
0.4 6.1 GO:0051260 protein homooligomerization(GO:0051260)
0.4 1.8 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.4 7.4 GO:0006890 retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.4 2.1 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.3 4.5 GO:0034976 response to endoplasmic reticulum stress(GO:0034976)
0.3 3.1 GO:1904030 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.3 3.1 GO:0015850 organic hydroxy compound transport(GO:0015850)
0.3 2.4 GO:2000779 regulation of double-strand break repair(GO:2000779)
0.3 14.9 GO:0022406 membrane docking(GO:0022406) vesicle docking(GO:0048278)
0.3 2.1 GO:0006488 dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.3 17.0 GO:0048573 photoperiodism, flowering(GO:0048573)
0.3 5.4 GO:0009704 de-etiolation(GO:0009704)
0.3 11.1 GO:0002239 response to oomycetes(GO:0002239)
0.3 2.3 GO:0031053 primary miRNA processing(GO:0031053)
0.3 3.0 GO:0016575 histone deacetylation(GO:0016575)
0.3 7.3 GO:0048506 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.3 4.0 GO:0046688 response to copper ion(GO:0046688)
0.3 3.0 GO:0006102 isocitrate metabolic process(GO:0006102)
0.3 1.3 GO:0010589 leaf proximal/distal pattern formation(GO:0010589)
0.3 1.7 GO:0000082 G1/S transition of mitotic cell cycle(GO:0000082)
0.3 4.6 GO:0043044 ATP-dependent chromatin remodeling(GO:0043044)
0.3 1.0 GO:0045905 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.3 2.6 GO:0017006 protein-tetrapyrrole linkage(GO:0017006)
0.3 1.6 GO:0018027 peptidyl-lysine dimethylation(GO:0018027)
0.3 3.9 GO:0000919 cell plate assembly(GO:0000919)
0.3 2.6 GO:0052482 defense response by cell wall thickening(GO:0052482)
0.3 11.6 GO:0048232 male gamete generation(GO:0048232)
0.3 2.6 GO:0097035 regulation of membrane lipid distribution(GO:0097035)
0.3 1.0 GO:0000349 generation of catalytic spliceosome for first transesterification step(GO:0000349)
0.3 1.3 GO:0006723 cuticle hydrocarbon biosynthetic process(GO:0006723)
0.3 1.6 GO:0045931 positive regulation of mitotic cell cycle(GO:0045931)
0.3 3.5 GO:0042147 retrograde transport, endosome to Golgi(GO:0042147)
0.3 55.7 GO:0071456 cellular response to hypoxia(GO:0071456)
0.3 1.6 GO:0045324 late endosome to vacuole transport(GO:0045324)
0.3 1.6 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.3 0.9 GO:0008334 histone mRNA metabolic process(GO:0008334)
0.3 2.5 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122)
0.3 3.1 GO:0051781 positive regulation of cell division(GO:0051781)
0.3 0.9 GO:0043132 NAD transport(GO:0043132)
0.3 2.1 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.3 6.6 GO:0009696 salicylic acid metabolic process(GO:0009696)
0.3 10.3 GO:0006749 glutathione metabolic process(GO:0006749)
0.3 2.4 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.3 1.5 GO:0019320 hexose catabolic process(GO:0019320)
0.3 9.0 GO:0008219 cell death(GO:0008219)
0.3 0.3 GO:0007021 tubulin complex assembly(GO:0007021)
0.3 14.5 GO:0009567 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.3 1.5 GO:0009245 lipid A biosynthetic process(GO:0009245) lipid A metabolic process(GO:0046493) lipooligosaccharide metabolic process(GO:1901269) lipooligosaccharide biosynthetic process(GO:1901271)
0.3 2.6 GO:0006450 regulation of translational fidelity(GO:0006450)
0.3 1.2 GO:0006225 UDP biosynthetic process(GO:0006225) ribonucleoside diphosphate biosynthetic process(GO:0009188) pyrimidine ribonucleoside diphosphate metabolic process(GO:0009193) pyrimidine ribonucleoside diphosphate biosynthetic process(GO:0009194) UDP metabolic process(GO:0046048)
0.3 1.2 GO:0001934 positive regulation of protein phosphorylation(GO:0001934)
0.3 2.6 GO:0009625 response to insect(GO:0009625)
0.3 1.1 GO:0000012 single strand break repair(GO:0000012)
0.3 0.9 GO:0046037 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.3 2.3 GO:0010093 specification of floral organ identity(GO:0010093)
0.3 1.4 GO:0006517 protein deglycosylation(GO:0006517)
0.3 3.0 GO:0031365 N-terminal protein amino acid modification(GO:0031365)
0.3 1.9 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.3 1.6 GO:0070141 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.3 3.6 GO:0010076 maintenance of floral meristem identity(GO:0010076)
0.3 1.9 GO:0018344 protein geranylgeranylation(GO:0018344)
0.3 0.3 GO:0055122 response to very low light intensity stimulus(GO:0055122)
0.3 1.9 GO:1903050 regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032434) regulation of proteasomal protein catabolic process(GO:0061136) regulation of proteolysis involved in cellular protein catabolic process(GO:1903050) regulation of cellular protein catabolic process(GO:1903362)
0.3 7.4 GO:0009789 positive regulation of abscisic acid-activated signaling pathway(GO:0009789)
0.3 7.1 GO:0006012 galactose metabolic process(GO:0006012)
0.3 1.3 GO:0052543 callose deposition in cell wall(GO:0052543)
0.3 2.4 GO:0032365 intracellular lipid transport(GO:0032365)
0.3 7.8 GO:0006888 ER to Golgi vesicle-mediated transport(GO:0006888)
0.3 1.0 GO:0016598 protein arginylation(GO:0016598)
0.3 1.8 GO:0080186 developmental vegetative growth(GO:0080186)
0.3 1.0 GO:0080001 mucilage extrusion from seed coat(GO:0080001)
0.3 2.1 GO:0009132 nucleoside diphosphate metabolic process(GO:0009132)
0.3 20.2 GO:0006090 pyruvate metabolic process(GO:0006090)
0.3 1.0 GO:0070734 histone H3-K27 methylation(GO:0070734)
0.2 3.0 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.2 8.0 GO:0090332 stomatal closure(GO:0090332)
0.2 24.6 GO:0010200 response to chitin(GO:0010200)
0.2 6.5 GO:0006887 exocytosis(GO:0006887)
0.2 51.4 GO:0051603 proteolysis involved in cellular protein catabolic process(GO:0051603)
0.2 2.1 GO:0034620 cellular response to unfolded protein(GO:0034620)
0.2 2.4 GO:0042430 indole-containing compound metabolic process(GO:0042430)
0.2 2.1 GO:0010099 regulation of photomorphogenesis(GO:0010099)
0.2 9.0 GO:0019758 S-glycoside biosynthetic process(GO:0016144) glycosinolate biosynthetic process(GO:0019758) glucosinolate biosynthetic process(GO:0019761)
0.2 0.9 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.2 1.4 GO:0045739 positive regulation of DNA repair(GO:0045739)
0.2 3.2 GO:0019511 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.2 37.3 GO:0016192 vesicle-mediated transport(GO:0016192)
0.2 1.1 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.2 96.3 GO:0016567 protein ubiquitination(GO:0016567)
0.2 1.1 GO:0070125 mitochondrial translational elongation(GO:0070125)
0.2 1.5 GO:0016584 nucleosome positioning(GO:0016584)
0.2 3.1 GO:0006914 autophagy(GO:0006914)
0.2 2.0 GO:0051568 histone H3-K4 methylation(GO:0051568)
0.2 0.9 GO:0006741 NADP biosynthetic process(GO:0006741)
0.2 2.8 GO:0010821 regulation of mitochondrion organization(GO:0010821)
0.2 0.6 GO:0010599 production of lsiRNA involved in RNA interference(GO:0010599)
0.2 2.1 GO:1990937 xylan acetylation(GO:1990937)
0.2 2.3 GO:0008285 negative regulation of cell proliferation(GO:0008285)
0.2 11.4 GO:0009845 seed germination(GO:0009845)
0.2 13.9 GO:0042594 response to starvation(GO:0042594)
0.2 0.8 GO:0023014 signal transduction by protein phosphorylation(GO:0023014)
0.2 2.0 GO:0002237 response to molecule of bacterial origin(GO:0002237)
0.2 4.8 GO:0009694 jasmonic acid metabolic process(GO:0009694)
0.2 1.2 GO:0006360 transcription from RNA polymerase I promoter(GO:0006360)
0.2 0.2 GO:0031023 microtubule organizing center organization(GO:0031023)
0.2 1.0 GO:0033673 negative regulation of protein kinase activity(GO:0006469) negative regulation of kinase activity(GO:0033673)
0.2 2.6 GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic(GO:0090502)
0.2 8.7 GO:0010260 leaf senescence(GO:0010150) organ senescence(GO:0010260)
0.2 0.5 GO:0010255 hexose mediated signaling(GO:0009757) glucose mediated signaling pathway(GO:0010255)
0.2 8.1 GO:0009615 response to virus(GO:0009615)
0.2 2.3 GO:0031048 chromatin silencing by small RNA(GO:0031048)
0.2 1.0 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.2 4.6 GO:0006813 potassium ion transport(GO:0006813)
0.2 8.9 GO:0010228 vegetative to reproductive phase transition of meristem(GO:0010228)
0.2 36.9 GO:0006357 regulation of transcription from RNA polymerase II promoter(GO:0006357)
0.2 0.7 GO:0090646 mitochondrial tRNA processing(GO:0090646)
0.2 1.7 GO:0048766 root hair initiation(GO:0048766)
0.2 5.1 GO:0031347 regulation of defense response(GO:0031347)
0.2 0.3 GO:0006821 chloride transport(GO:0006821)
0.2 2.4 GO:0052325 cell wall pectin biosynthetic process(GO:0052325)
0.2 16.6 GO:0006457 protein folding(GO:0006457)
0.2 2.2 GO:0006188 IMP biosynthetic process(GO:0006188)
0.2 0.9 GO:0010078 maintenance of root meristem identity(GO:0010078)
0.2 0.5 GO:0006386 termination of RNA polymerase III transcription(GO:0006386) tRNA 3'-trailer cleavage(GO:0042779) tRNA 3'-end processing(GO:0042780)
0.2 1.9 GO:0019674 NAD metabolic process(GO:0019674)
0.2 0.5 GO:0071763 nuclear membrane organization(GO:0071763)
0.2 3.7 GO:0006101 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.2 2.4 GO:0000460 maturation of 5.8S rRNA(GO:0000460)
0.2 1.2 GO:0006312 mitotic recombination(GO:0006312)
0.2 6.9 GO:0010431 seed maturation(GO:0010431)
0.1 2.1 GO:0010286 heat acclimation(GO:0010286)
0.1 1.5 GO:0034765 regulation of transmembrane transport(GO:0034762) regulation of ion transmembrane transport(GO:0034765)
0.1 3.3 GO:0010043 response to zinc ion(GO:0010043)
0.1 0.4 GO:1901562 response to paraquat(GO:1901562)
0.1 0.6 GO:0000710 meiotic mismatch repair(GO:0000710) maintenance of DNA repeat elements(GO:0043570)
0.1 0.9 GO:0006591 ornithine metabolic process(GO:0006591)
0.1 0.4 GO:0031848 protection from non-homologous end joining at telomere(GO:0031848)
0.1 4.0 GO:0009846 pollen germination(GO:0009846)
0.1 17.4 GO:0009100 protein glycosylation(GO:0006486) glycoprotein metabolic process(GO:0009100) glycoprotein biosynthetic process(GO:0009101) macromolecule glycosylation(GO:0043413)
0.1 3.4 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.1 1.6 GO:0009641 shade avoidance(GO:0009641)
0.1 23.5 GO:0009414 response to water deprivation(GO:0009414)
0.1 13.2 GO:0000398 mRNA splicing, via spliceosome(GO:0000398)
0.1 2.2 GO:0032981 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.1 3.2 GO:0010345 suberin biosynthetic process(GO:0010345)
0.1 1.1 GO:0080156 mitochondrial mRNA modification(GO:0080156) mitochondrial RNA modification(GO:1900864)
0.1 0.9 GO:0042727 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231) flavin-containing compound biosynthetic process(GO:0042727)
0.1 0.6 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.1 0.7 GO:0015689 molybdate ion transport(GO:0015689)
0.1 3.7 GO:0072503 cellular calcium ion homeostasis(GO:0006874) calcium ion homeostasis(GO:0055074) cellular divalent inorganic cation homeostasis(GO:0072503)
0.1 0.3 GO:0071265 L-methionine biosynthetic process(GO:0071265)
0.1 3.1 GO:0016042 lipid catabolic process(GO:0016042)
0.1 0.4 GO:0080009 mRNA methylation(GO:0080009)
0.1 1.6 GO:0042325 regulation of phosphorylation(GO:0042325)
0.1 1.1 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.1 3.1 GO:0006333 chromatin assembly or disassembly(GO:0006333)
0.1 1.4 GO:0006352 DNA-templated transcription, initiation(GO:0006352)
0.1 3.0 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.1 1.8 GO:0051017 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.1 3.1 GO:0030490 maturation of SSU-rRNA(GO:0030490)
0.1 3.1 GO:0016579 protein deubiquitination(GO:0016579)
0.1 2.6 GO:0006366 transcription from RNA polymerase II promoter(GO:0006366)
0.1 0.2 GO:0051351 regulation of ligase activity(GO:0051340) positive regulation of ligase activity(GO:0051351)
0.1 1.1 GO:0030422 production of siRNA involved in RNA interference(GO:0030422)
0.1 1.3 GO:1900865 chloroplast RNA modification(GO:1900865)
0.1 2.5 GO:0042274 ribosomal small subunit biogenesis(GO:0042274)
0.1 1.8 GO:0019759 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.1 7.3 GO:0050832 defense response to fungus(GO:0050832)
0.1 3.8 GO:0048544 cell recognition(GO:0008037) recognition of pollen(GO:0048544)
0.1 0.1 GO:0010117 photoprotection(GO:0010117)
0.1 1.1 GO:0043449 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.1 1.2 GO:0035194 posttranscriptional gene silencing by RNA(GO:0035194)
0.1 16.7 GO:0006979 response to oxidative stress(GO:0006979)
0.1 2.6 GO:1902410 cytokinetic process(GO:0032506) mitotic cytokinetic process(GO:1902410)
0.1 0.7 GO:0005987 sucrose catabolic process(GO:0005987)
0.1 0.2 GO:0015867 ADP transport(GO:0015866) ATP transport(GO:0015867)
0.1 1.6 GO:0044744 protein import into nucleus(GO:0006606) protein targeting to nucleus(GO:0044744)
0.1 0.4 GO:0002098 tRNA wobble uridine modification(GO:0002098)
0.1 0.7 GO:0006383 transcription from RNA polymerase III promoter(GO:0006383)
0.0 0.3 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.0 0.3 GO:0009957 epidermal cell fate specification(GO:0009957)
0.0 1.3 GO:0009738 abscisic acid-activated signaling pathway(GO:0009738)
0.0 0.1 GO:0015919 peroxisomal membrane transport(GO:0015919)
0.0 0.3 GO:0090487 toxin metabolic process(GO:0009404) toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.0 2.0 GO:0009753 response to jasmonic acid(GO:0009753)
0.0 0.5 GO:0016573 internal protein amino acid acetylation(GO:0006475) histone acetylation(GO:0016573) internal peptidyl-lysine acetylation(GO:0018393) peptidyl-lysine acetylation(GO:0018394)
0.0 0.1 GO:0016197 endosomal transport(GO:0016197)
0.0 0.5 GO:0006626 protein targeting to mitochondrion(GO:0006626)
0.0 0.1 GO:0034644 cellular response to UV(GO:0034644)
0.0 0.1 GO:0051320 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) cell cycle phase(GO:0022403) biological phase(GO:0044848) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329) mitotic cell cycle phase(GO:0098763)
0.0 0.2 GO:0046653 tetrahydrofolate metabolic process(GO:0046653)
0.0 0.2 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.0 0.5 GO:0006730 one-carbon metabolic process(GO:0006730)
0.0 0.1 GO:0030174 regulation of DNA-dependent DNA replication initiation(GO:0030174)
0.0 1.9 GO:0006470 protein dephosphorylation(GO:0006470)
0.0 0.0 GO:0030030 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
0.0 0.3 GO:0019760 S-glycoside metabolic process(GO:0016143) glycosinolate metabolic process(GO:0019757) glucosinolate metabolic process(GO:0019760)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
3.0 12.1 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
2.6 10.3 GO:0034272 phosphatidylinositol 3-kinase complex(GO:0005942) phosphatidylinositol 3-kinase complex, class III, type I(GO:0034271) phosphatidylinositol 3-kinase complex, class III, type II(GO:0034272) phosphatidylinositol 3-kinase complex, class III(GO:0035032)
2.4 7.1 GO:0034703 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
2.1 12.6 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
1.9 7.6 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
1.9 5.6 GO:0000792 heterochromatin(GO:0000792)
1.9 1.9 GO:0031597 cytosolic proteasome complex(GO:0031597)
1.8 9.1 GO:0035061 interchromatin granule(GO:0035061)
1.7 25.1 GO:0005801 cis-Golgi network(GO:0005801)
1.6 6.5 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
1.4 12.3 GO:0089701 U2AF(GO:0089701)
1.3 1.3 GO:0005685 U1 snRNP(GO:0005685)
1.3 8.9 GO:0090395 plant cell papilla(GO:0090395)
1.2 2.5 GO:0030132 clathrin coat of coated pit(GO:0030132)
1.2 2.4 GO:0070603 SWI/SNF superfamily-type complex(GO:0070603)
1.2 7.2 GO:0005947 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947) mitochondrial tricarboxylic acid cycle enzyme complex(GO:0030062)
1.2 3.5 GO:0042709 succinate-CoA ligase complex(GO:0042709)
1.2 5.8 GO:0034657 GID complex(GO:0034657)
1.1 4.6 GO:0034715 pICln-Sm protein complex(GO:0034715)
1.1 4.6 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
1.1 4.4 GO:0033185 mannosyltransferase complex(GO:0031501) dolichol-phosphate-mannose synthase complex(GO:0033185)
1.1 4.4 GO:0043625 delta DNA polymerase complex(GO:0043625)
1.1 3.3 GO:0045334 clathrin-coated endocytic vesicle(GO:0045334)
1.1 6.3 GO:0000408 EKC/KEOPS complex(GO:0000408)
1.0 4.0 GO:0030897 HOPS complex(GO:0030897)
0.9 4.7 GO:0033263 CORVET complex(GO:0033263)
0.9 14.1 GO:0031231 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.9 4.5 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.9 13.3 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.8 7.6 GO:0000813 ESCRT I complex(GO:0000813)
0.8 4.2 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.8 6.6 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.8 4.0 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.8 2.4 GO:0031021 interphase microtubule organizing center(GO:0031021)
0.8 5.5 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.8 4.7 GO:0031931 TORC1 complex(GO:0031931) TOR complex(GO:0038201)
0.8 1.6 GO:0030130 clathrin coat of trans-Golgi network vesicle(GO:0030130)
0.8 3.8 GO:0030906 retromer, cargo-selective complex(GO:0030906)
0.8 6.0 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.8 4.5 GO:0035145 exon-exon junction complex(GO:0035145)
0.7 7.3 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.7 10.9 GO:0031970 organelle envelope lumen(GO:0031970)
0.7 13.5 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.7 2.1 GO:0097196 Shu complex(GO:0097196)
0.7 11.1 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.7 2.8 GO:0000126 transcription factor TFIIIB complex(GO:0000126)
0.7 11.0 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.7 4.0 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.7 12.4 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.7 7.2 GO:0000407 pre-autophagosomal structure(GO:0000407)
0.6 1.9 GO:0030874 nucleolar chromatin(GO:0030874)
0.6 4.4 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.6 5.0 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.6 1.9 GO:0000243 commitment complex(GO:0000243)
0.6 4.8 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.6 4.8 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.6 5.3 GO:0090544 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.6 2.3 GO:0010445 nuclear dicing body(GO:0010445)
0.6 5.2 GO:0017119 Golgi transport complex(GO:0017119)
0.6 5.7 GO:0016272 prefoldin complex(GO:0016272)
0.6 5.2 GO:1902562 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.6 5.7 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.6 2.3 GO:0005655 nucleolar ribonuclease P complex(GO:0005655) multimeric ribonuclease P complex(GO:0030681)
0.6 19.0 GO:0008287 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.6 6.7 GO:0070062 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.6 4.5 GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.6 5.5 GO:0005844 polysome(GO:0005844)
0.6 22.7 GO:0000323 lytic vacuole(GO:0000323)
0.6 5.5 GO:0072546 ER membrane protein complex(GO:0072546)
0.5 23.7 GO:0016592 mediator complex(GO:0016592)
0.5 17.3 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.5 2.6 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.5 2.6 GO:0031907 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.5 1.6 GO:0005712 chiasma(GO:0005712)
0.5 24.1 GO:0005770 late endosome(GO:0005770)
0.5 3.1 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.5 4.1 GO:0070390 transcription export complex 2(GO:0070390)
0.5 7.9 GO:0031965 nuclear membrane(GO:0031965)
0.5 2.5 GO:0005839 proteasome core complex(GO:0005839) proteasome core complex, alpha-subunit complex(GO:0019773)
0.5 6.8 GO:0045281 respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281)
0.5 5.3 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.4 2.7 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.4 1.3 GO:0005814 centrosome(GO:0005813) centriole(GO:0005814)
0.4 4.4 GO:0010168 ER body(GO:0010168)
0.4 10.8 GO:0000145 exocyst(GO:0000145)
0.4 15.7 GO:0031201 SNARE complex(GO:0031201)
0.4 7.5 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.4 1.7 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.4 1.7 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.4 3.3 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.4 21.4 GO:0005797 Golgi medial cisterna(GO:0005797)
0.4 2.4 GO:0017053 transcriptional repressor complex(GO:0017053)
0.4 22.1 GO:0016607 nuclear speck(GO:0016607)
0.4 2.0 GO:0042721 mitochondrial inner membrane protein insertion complex(GO:0042721)
0.4 1.5 GO:0005687 U4 snRNP(GO:0005687)
0.4 9.2 GO:0000118 histone deacetylase complex(GO:0000118)
0.4 2.7 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.4 2.2 GO:0044545 NSL complex(GO:0044545)
0.4 5.9 GO:0071011 precatalytic spliceosome(GO:0071011)
0.4 46.1 GO:0018995 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.4 2.9 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.4 2.9 GO:0005682 U5 snRNP(GO:0005682)
0.4 1.8 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.3 1.0 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.3 4.0 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.3 1.7 GO:0034425 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.3 2.3 GO:0072379 ER membrane insertion complex(GO:0072379)
0.3 2.6 GO:0000124 SAGA complex(GO:0000124)
0.3 1.9 GO:0000325 plant-type vacuole(GO:0000325)
0.3 3.0 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.3 24.9 GO:0005746 mitochondrial respiratory chain(GO:0005746) respiratory chain(GO:0070469)
0.3 18.1 GO:0090406 pollen tube(GO:0090406)
0.3 1.5 GO:0000938 GARP complex(GO:0000938)
0.3 3.5 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.3 1.1 GO:0001673 male germ cell nucleus(GO:0001673)
0.3 4.3 GO:0035097 histone methyltransferase complex(GO:0035097)
0.3 2.8 GO:0032806 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.3 34.0 GO:0000790 nuclear chromatin(GO:0000790)
0.3 11.5 GO:0005741 mitochondrial outer membrane(GO:0005741)
0.3 1.9 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.3 18.0 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.3 0.5 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.3 1.6 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.3 1.6 GO:0031082 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.3 1.6 GO:0005662 DNA replication factor A complex(GO:0005662)
0.3 1.5 GO:0035619 root hair tip(GO:0035619)
0.3 48.1 GO:0005789 endoplasmic reticulum membrane(GO:0005789)
0.3 1.3 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.2 2.5 GO:0030665 clathrin vesicle coat(GO:0030125) clathrin-coated vesicle membrane(GO:0030665)
0.2 1.7 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778)
0.2 1.7 GO:0031371 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.2 0.7 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.2 1.4 GO:0070552 BRISC complex(GO:0070552)
0.2 71.7 GO:0005777 peroxisome(GO:0005777) microbody(GO:0042579)
0.2 3.4 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.2 19.3 GO:0000138 Golgi trans cisterna(GO:0000138)
0.2 3.4 GO:0005838 proteasome regulatory particle(GO:0005838) proteasome accessory complex(GO:0022624)
0.2 1.3 GO:0000346 transcription export complex(GO:0000346) THO complex part of transcription export complex(GO:0000445)
0.2 4.9 GO:0005761 mitochondrial ribosome(GO:0005761) mitochondrial large ribosomal subunit(GO:0005762)
0.2 2.3 GO:0008023 transcription elongation factor complex(GO:0008023)
0.2 0.6 GO:0032301 MutSalpha complex(GO:0032301)
0.2 1.4 GO:0030014 CCR4-NOT complex(GO:0030014)
0.2 6.4 GO:0010008 endosome membrane(GO:0010008)
0.2 0.7 GO:0032592 integral component of mitochondrial membrane(GO:0032592)
0.2 3.2 GO:0032040 small-subunit processome(GO:0032040)
0.2 1.9 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.2 0.3 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.2 0.9 GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276)
0.2 4.1 GO:0009504 cell plate(GO:0009504)
0.2 2.6 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.2 8.4 GO:0005887 integral component of plasma membrane(GO:0005887)
0.2 1.7 GO:0000127 transcription factor TFIIIC complex(GO:0000127) RNA polymerase III transcription factor complex(GO:0090576)
0.2 4.5 GO:0044452 nucleolar part(GO:0044452)
0.2 4.7 GO:0000137 Golgi cis cisterna(GO:0000137)
0.2 72.8 GO:0005774 vacuolar membrane(GO:0005774)
0.2 3.2 GO:0000775 chromosome, centromeric region(GO:0000775)
0.1 1.4 GO:0000123 histone acetyltransferase complex(GO:0000123)
0.1 1.3 GO:0019774 proteasome core complex, beta-subunit complex(GO:0019774)
0.1 0.8 GO:0000974 Prp19 complex(GO:0000974)
0.1 3.4 GO:0071013 catalytic step 2 spliceosome(GO:0071013)
0.1 3.1 GO:0098687 chromosomal region(GO:0098687)
0.1 2.2 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.1 0.7 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.1 0.4 GO:0031352 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.1 1.3 GO:0030686 90S preribosome(GO:0030686)
0.1 2.5 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.1 17.4 GO:0000151 ubiquitin ligase complex(GO:0000151)
0.1 0.6 GO:0032300 mismatch repair complex(GO:0032300)
0.1 0.6 GO:0070652 HAUS complex(GO:0070652)
0.1 3.8 GO:0005635 nuclear envelope(GO:0005635)
0.1 0.8 GO:0005795 Golgi stack(GO:0005795)
0.0 5.5 GO:0005768 endosome(GO:0005768)
0.0 0.6 GO:0048475 membrane coat(GO:0030117) coated membrane(GO:0048475)
0.0 21.8 GO:0005783 endoplasmic reticulum(GO:0005783)
0.0 130.2 GO:0005739 mitochondrion(GO:0005739)
0.0 1.2 GO:0005681 spliceosomal complex(GO:0005681)
0.0 75.6 GO:0005829 cytosol(GO:0005829)
0.0 0.7 GO:0090575 RNA polymerase II transcription factor complex(GO:0090575)
0.0 80.8 GO:0005634 nucleus(GO:0005634)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
5.9 17.7 GO:0008909 isochorismate synthase activity(GO:0008909)
5.2 20.8 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
4.7 14.2 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
4.7 14.1 GO:0004353 glutamate dehydrogenase [NAD(P)+] activity(GO:0004353)
4.3 17.2 GO:0046593 mandelonitrile lyase activity(GO:0046593)
4.3 4.3 GO:0022858 L-alanine transmembrane transporter activity(GO:0015180) alanine transmembrane transporter activity(GO:0022858)
4.1 24.8 GO:0015189 arginine transmembrane transporter activity(GO:0015181) L-lysine transmembrane transporter activity(GO:0015189)
3.5 24.5 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
3.3 13.0 GO:0004556 alpha-amylase activity(GO:0004556)
3.1 9.3 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
2.9 26.4 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
2.8 11.2 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
2.6 7.9 GO:0008798 beta-aspartyl-peptidase activity(GO:0008798)
2.6 5.2 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
2.5 12.6 GO:0005355 glucose transmembrane transporter activity(GO:0005355)
2.5 27.7 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
2.5 7.4 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
2.4 9.7 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
2.4 9.7 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
2.4 7.2 GO:0019779 Atg8 activating enzyme activity(GO:0019779)
2.4 19.1 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
2.4 7.1 GO:0004750 ribulose-phosphate 3-epimerase activity(GO:0004750)
2.3 11.5 GO:0036440 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
2.2 6.7 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
2.2 6.5 GO:0008936 nicotinamidase activity(GO:0008936)
2.1 10.6 GO:0004165 dodecenoyl-CoA delta-isomerase activity(GO:0004165)
2.0 14.1 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
1.9 7.8 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
1.9 9.3 GO:0015116 sulfate transmembrane transporter activity(GO:0015116)
1.8 7.4 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
1.8 9.2 GO:0033744 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
1.8 5.4 GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity(GO:0003857)
1.8 3.6 GO:0004300 enoyl-CoA hydratase activity(GO:0004300)
1.7 5.2 GO:0015292 uniporter activity(GO:0015292)
1.7 5.2 GO:0050736 O-malonyltransferase activity(GO:0050736)
1.7 5.2 GO:0016041 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
1.7 5.2 GO:0004788 thiamine diphosphokinase activity(GO:0004788) thiamine binding(GO:0030975)
1.7 6.7 GO:0070006 metalloaminopeptidase activity(GO:0070006)
1.7 5.0 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
1.6 4.9 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
1.6 6.4 GO:0010296 prenylcysteine methylesterase activity(GO:0010296)
1.6 11.0 GO:0008157 protein phosphatase 1 binding(GO:0008157)
1.5 12.3 GO:0009916 alternative oxidase activity(GO:0009916)
1.5 6.1 GO:0052743 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
1.5 9.1 GO:0070547 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
1.5 6.0 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
1.5 16.5 GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
1.5 10.5 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
1.5 5.8 GO:0036218 dTTP diphosphatase activity(GO:0036218)
1.5 10.2 GO:0050551 myrcene synthase activity(GO:0050551)
1.4 5.8 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
1.4 24.5 GO:0070290 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
1.4 7.2 GO:0003680 AT DNA binding(GO:0003680)
1.4 7.2 GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity(GO:0003863)
1.4 4.3 GO:0032131 alkylated DNA binding(GO:0032131)
1.4 9.9 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
1.4 4.2 GO:0008265 Mo-molybdopterin cofactor sulfurase activity(GO:0008265)
1.4 5.6 GO:0003935 GTP cyclohydrolase II activity(GO:0003935) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity(GO:0008686)
1.4 4.1 GO:0043425 bHLH transcription factor binding(GO:0043425)
1.4 5.4 GO:0016920 pyroglutamyl-peptidase activity(GO:0016920)
1.3 25.5 GO:0015248 sterol transporter activity(GO:0015248)
1.3 3.9 GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726)
1.3 7.8 GO:0004126 cytidine deaminase activity(GO:0004126)
1.3 12.6 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
1.3 3.8 GO:0008481 sphinganine kinase activity(GO:0008481)
1.3 16.3 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
1.2 3.7 GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity(GO:0003864)
1.2 23.3 GO:0016844 strictosidine synthase activity(GO:0016844)
1.2 3.7 GO:0004438 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
1.2 7.3 GO:0008728 GTP diphosphokinase activity(GO:0008728)
1.2 3.6 GO:0008517 folic acid transporter activity(GO:0008517)
1.2 9.6 GO:0052634 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
1.2 3.6 GO:0004046 aminoacylase activity(GO:0004046)
1.2 8.3 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
1.2 3.5 GO:0004774 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
1.2 3.5 GO:0004359 glutaminase activity(GO:0004359)
1.2 3.5 GO:0001727 lipid kinase activity(GO:0001727)
1.1 13.8 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
1.1 8.0 GO:0001653 peptide receptor activity(GO:0001653)
1.1 4.4 GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity(GO:0004582)
1.1 4.4 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity(GO:0010309)
1.1 20.8 GO:0015020 glucuronosyltransferase activity(GO:0015020)
1.1 10.6 GO:0004806 triglyceride lipase activity(GO:0004806)
1.0 3.1 GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity(GO:0008963)
1.0 3.1 GO:0003856 3-dehydroquinate synthase activity(GO:0003856)
1.0 12.3 GO:0030628 pre-mRNA 3'-splice site binding(GO:0030628)
1.0 14.0 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
1.0 8.8 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
1.0 3.9 GO:1901982 disaccharide binding(GO:0048030) maltose binding(GO:1901982)
1.0 3.8 GO:0015924 mannosyl-oligosaccharide mannosidase activity(GO:0015924)
1.0 8.6 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
1.0 2.9 GO:0036402 proteasome-activating ATPase activity(GO:0036402)
0.9 2.8 GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity(GO:0052725)
0.9 2.8 GO:0004424 imidazoleglycerol-phosphate dehydratase activity(GO:0004424)
0.9 2.8 GO:0031210 phosphatidylcholine binding(GO:0031210) quaternary ammonium group binding(GO:0050997)
0.9 6.5 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.9 2.7 GO:0098748 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.9 2.7 GO:0016504 peptidase activator activity(GO:0016504)
0.9 4.5 GO:0030371 translation repressor activity(GO:0030371)
0.9 0.9 GO:0050284 sinapate 1-glucosyltransferase activity(GO:0050284)
0.9 4.5 GO:0022841 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.9 9.0 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.9 9.9 GO:0030674 protein binding, bridging(GO:0030674)
0.9 9.8 GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)
0.9 6.2 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.9 7.1 GO:0043995 histone acetyltransferase activity (H4-K5 specific)(GO:0043995)
0.9 4.4 GO:0010179 IAA-Ala conjugate hydrolase activity(GO:0010179)
0.9 3.5 GO:0008460 dTDP-glucose 4,6-dehydratase activity(GO:0008460)
0.9 4.3 GO:0008113 peptide-methionine (S)-S-oxide reductase activity(GO:0008113)
0.8 2.5 GO:0035671 enone reductase activity(GO:0035671)
0.8 9.7 GO:0017025 TBP-class protein binding(GO:0017025)
0.8 4.0 GO:0016629 12-oxophytodienoate reductase activity(GO:0016629)
0.8 5.6 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.8 4.0 GO:0030976 thiamine pyrophosphate binding(GO:0030976)
0.8 10.3 GO:0015175 neutral amino acid transmembrane transporter activity(GO:0015175)
0.8 1.6 GO:0019789 SUMO transferase activity(GO:0019789)
0.8 3.9 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.8 8.5 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.8 3.9 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.8 3.9 GO:0015166 myo-inositol transmembrane transporter activity(GO:0005365) myo-inositol:proton symporter activity(GO:0005366) polyol transmembrane transporter activity(GO:0015166)
0.8 5.4 GO:0000257 nitrilase activity(GO:0000257) hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles(GO:0016815) nitrile hydratase activity(GO:0018822) indole-3-acetonitrile nitrilase activity(GO:0080061)
0.8 3.0 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.8 2.3 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.8 2.3 GO:0060090 binding, bridging(GO:0060090)
0.7 5.2 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.7 4.5 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.7 7.4 GO:0035198 miRNA binding(GO:0035198)
0.7 2.2 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.7 3.7 GO:0038199 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.7 2.2 GO:0016906 sterol 3-beta-glucosyltransferase activity(GO:0016906)
0.7 5.1 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.7 6.5 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.7 2.8 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.7 2.1 GO:0070678 preprotein binding(GO:0070678)
0.7 2.8 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.7 6.2 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.7 2.8 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.7 1.4 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.7 2.0 GO:0010485 H4 histone acetyltransferase activity(GO:0010485)
0.7 2.0 GO:1990247 N6-methyladenosine-containing RNA binding(GO:1990247)
0.7 12.4 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.7 9.8 GO:0008144 drug binding(GO:0008144) cyclosporin A binding(GO:0016018)
0.7 3.9 GO:0015288 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.6 2.6 GO:0000268 peroxisome targeting sequence binding(GO:0000268)
0.6 79.2 GO:0019900 kinase binding(GO:0019900)
0.6 25.9 GO:0004707 MAP kinase activity(GO:0004707)
0.6 1.9 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
0.6 5.0 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.6 3.1 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.6 3.7 GO:0015368 calcium:cation antiporter activity(GO:0015368) calcium:proton antiporter activity(GO:0015369)
0.6 2.4 GO:0043546 molybdopterin cofactor binding(GO:0043546)
0.6 2.4 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.6 4.2 GO:0016004 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.6 9.6 GO:0051117 ATPase binding(GO:0051117)
0.6 22.7 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.6 2.4 GO:0016034 maleylacetoacetate isomerase activity(GO:0016034)
0.6 6.9 GO:0102391 acyl-CoA ligase activity(GO:0003996) decanoate--CoA ligase activity(GO:0102391)
0.6 8.4 GO:0004743 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.6 1.7 GO:0016435 rRNA (guanine) methyltransferase activity(GO:0016435)
0.6 6.2 GO:0019209 kinase activator activity(GO:0019209) protein kinase activator activity(GO:0030295)
0.5 3.3 GO:0030544 Hsp70 protein binding(GO:0030544)
0.5 69.5 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.5 2.2 GO:0051731 polynucleotide 5'-hydroxyl-kinase activity(GO:0051731)
0.5 3.8 GO:0004471 malic enzyme activity(GO:0004470) malate dehydrogenase (decarboxylating) (NAD+) activity(GO:0004471)
0.5 12.5 GO:0097602 cullin family protein binding(GO:0097602)
0.5 61.5 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.5 4.3 GO:0043891 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.5 14.2 GO:0051787 misfolded protein binding(GO:0051787)
0.5 1.6 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.5 18.8 GO:0044390 ubiquitin-like protein conjugating enzyme binding(GO:0044390)
0.5 7.8 GO:0031543 peptidyl-proline dioxygenase activity(GO:0031543)
0.5 8.2 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.5 36.0 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.5 30.3 GO:0051213 dioxygenase activity(GO:0051213)
0.5 3.5 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.5 9.5 GO:1901981 phosphatidylinositol phosphate binding(GO:1901981)
0.5 2.5 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.5 34.7 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.5 2.0 GO:0015081 sodium ion transmembrane transporter activity(GO:0015081)
0.5 6.4 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.5 5.4 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.5 1.4 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.5 2.4 GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds(GO:0016863)
0.5 1.9 GO:0097363 protein O-GlcNAc transferase activity(GO:0097363)
0.5 3.3 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.5 1.9 GO:0005247 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.5 4.1 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.5 3.7 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.5 14.6 GO:0016597 amino acid binding(GO:0016597)
0.5 3.2 GO:0016411 acylglycerol O-acyltransferase activity(GO:0016411)
0.5 0.9 GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor(GO:0016670)
0.5 0.9 GO:0004567 beta-mannosidase activity(GO:0004567)
0.4 6.5 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.4 50.8 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.4 24.9 GO:0005096 GTPase activator activity(GO:0005096)
0.4 47.6 GO:0046982 protein heterodimerization activity(GO:0046982)
0.4 1.7 GO:0035514 DNA demethylase activity(GO:0035514)
0.4 1.3 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.4 16.7 GO:0003714 transcription corepressor activity(GO:0003714)
0.4 2.9 GO:0019903 protein phosphatase binding(GO:0019903)
0.4 2.1 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.4 1.2 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.4 3.7 GO:0070300 phosphatidic acid binding(GO:0070300)
0.4 3.2 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.4 4.3 GO:0034647 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.4 21.8 GO:0005484 SNAP receptor activity(GO:0005484)
0.4 1.1 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.4 4.6 GO:0051879 Hsp90 protein binding(GO:0051879)
0.4 7.6 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.4 2.3 GO:0030527 structural constituent of chromatin(GO:0030527)
0.4 2.3 GO:0016426 tRNA (adenine) methyltransferase activity(GO:0016426)
0.4 7.9 GO:0070122 isopeptidase activity(GO:0070122)
0.4 1.1 GO:0008821 crossover junction endodeoxyribonuclease activity(GO:0008821)
0.4 92.5 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.4 10.3 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.4 1.5 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.4 4.3 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.4 1.1 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.4 3.2 GO:0031078 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.4 5.3 GO:0031491 nucleosome binding(GO:0031491)
0.3 4.9 GO:0004402 histone acetyltransferase activity(GO:0004402) peptide-lysine-N-acetyltransferase activity(GO:0061733)
0.3 1.0 GO:0010354 homogentisate prenyltransferase activity(GO:0010354)
0.3 1.4 GO:0004385 guanylate kinase activity(GO:0004385)
0.3 1.0 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.3 5.8 GO:0003746 translation elongation factor activity(GO:0003746)
0.3 1.7 GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity(GO:0046509)
0.3 1.0 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.3 6.6 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.3 1.3 GO:0031516 far-red light photoreceptor activity(GO:0031516)
0.3 1.6 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.3 1.6 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.3 1.0 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.3 4.4 GO:0004017 adenylate kinase activity(GO:0004017)
0.3 7.6 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.3 0.9 GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity(GO:0035242)
0.3 6.5 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.3 13.6 GO:0005347 ATP transmembrane transporter activity(GO:0005347)
0.3 1.2 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.3 20.6 GO:0042393 histone binding(GO:0042393)
0.3 5.7 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.3 3.6 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.3 3.8 GO:0008536 Ran GTPase binding(GO:0008536)
0.3 15.6 GO:0008234 cysteine-type peptidase activity(GO:0008234)
0.3 1.2 GO:0033862 UMP kinase activity(GO:0033862)
0.3 6.3 GO:0019887 protein kinase regulator activity(GO:0019887)
0.3 4.3 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.3 2.5 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.3 4.0 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.3 3.9 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.3 1.6 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.3 8.4 GO:0043022 ribosome binding(GO:0043022)
0.3 4.0 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.3 6.6 GO:0016790 thiolester hydrolase activity(GO:0016790)
0.3 1.0 GO:0004057 arginyltransferase activity(GO:0004057)
0.3 1.8 GO:0015391 nucleobase:cation symporter activity(GO:0015391)
0.3 1.3 GO:0036002 pre-mRNA binding(GO:0036002)
0.3 2.3 GO:0004526 ribonuclease P activity(GO:0004526)
0.2 1.7 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.2 2.2 GO:0043047 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.2 2.5 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.2 1.7 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.2 10.5 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.2 1.2 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.2 1.7 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.2 3.3 GO:0050136 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.2 0.7 GO:0004634 phosphopyruvate hydratase activity(GO:0004634)
0.2 11.7 GO:0043130 ubiquitin-like protein binding(GO:0032182) ubiquitin binding(GO:0043130)
0.2 1.6 GO:0032977 membrane insertase activity(GO:0032977)
0.2 2.0 GO:0008308 voltage-gated anion channel activity(GO:0008308)
0.2 1.1 GO:0015002 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.2 0.7 GO:0031219 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.2 0.9 GO:0003951 NAD+ kinase activity(GO:0003951)
0.2 3.2 GO:0015086 cadmium ion transmembrane transporter activity(GO:0015086)
0.2 14.6 GO:0003712 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.2 2.3 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.2 2.0 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.2 4.8 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.2 0.6 GO:0032138 single base insertion or deletion binding(GO:0032138) single thymine insertion binding(GO:0032143) mismatch repair complex binding(GO:0032404) MutLalpha complex binding(GO:0032405)
0.2 1.2 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.2 36.3 GO:0005516 calmodulin binding(GO:0005516)
0.2 1.7 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.2 0.8 GO:0000062 fatty-acyl-CoA binding(GO:0000062)
0.2 0.9 GO:0015203 polyamine transmembrane transporter activity(GO:0015203)
0.2 0.5 GO:0004106 chorismate mutase activity(GO:0004106)
0.2 1.8 GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors(GO:0016645)
0.2 85.0 GO:0000975 regulatory region DNA binding(GO:0000975) transcription regulatory region sequence-specific DNA binding(GO:0000976) regulatory region nucleic acid binding(GO:0001067) transcription regulatory region DNA binding(GO:0044212)
0.2 3.3 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.2 2.6 GO:0005548 phospholipid transporter activity(GO:0005548)
0.2 5.2 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.2 2.6 GO:0003725 double-stranded RNA binding(GO:0003725)
0.2 1.0 GO:0008235 metalloexopeptidase activity(GO:0008235)
0.2 1.6 GO:0016885 CoA carboxylase activity(GO:0016421) ligase activity, forming carbon-carbon bonds(GO:0016885)
0.2 1.4 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.2 1.8 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.1 12.5 GO:0051082 unfolded protein binding(GO:0051082)
0.1 1.8 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.1 7.2 GO:0005543 phospholipid binding(GO:0005543)
0.1 3.8 GO:0017137 Rab GTPase binding(GO:0017137)
0.1 2.2 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.1 1.3 GO:1904680 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.1 0.7 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.1 1.3 GO:0008327 methyl-CpG binding(GO:0008327)
0.1 1.1 GO:0016208 AMP binding(GO:0016208)
0.1 1.5 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.1 4.6 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 0.9 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.1 1.3 GO:0016161 amylase activity(GO:0016160) beta-amylase activity(GO:0016161)
0.1 2.9 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.1 0.3 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.1 2.2 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.1 1.1 GO:0043021 ribonucleoprotein complex binding(GO:0043021)
0.1 0.4 GO:0030151 molybdenum ion binding(GO:0030151)
0.1 0.6 GO:0004766 spermidine synthase activity(GO:0004766)
0.1 0.5 GO:0004325 ferrochelatase activity(GO:0004325)
0.1 0.3 GO:0031418 L-ascorbic acid binding(GO:0031418)
0.1 0.6 GO:0004661 protein geranylgeranyltransferase activity(GO:0004661) Rab geranylgeranyltransferase activity(GO:0004663)
0.1 0.5 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.1 3.6 GO:0004364 glutathione transferase activity(GO:0004364)
0.1 14.1 GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709)
0.1 29.5 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.1 3.1 GO:0004620 phospholipase activity(GO:0004620)
0.1 1.1 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.1 0.8 GO:0004340 glucokinase activity(GO:0004340)
0.1 1.9 GO:0031386 protein tag(GO:0031386)
0.1 3.2 GO:0016831 carboxy-lyase activity(GO:0016831)
0.1 11.7 GO:0003924 GTPase activity(GO:0003924)
0.1 1.4 GO:1901681 sulfur compound binding(GO:1901681)
0.1 0.6 GO:0030983 mismatched DNA binding(GO:0030983)
0.1 0.2 GO:0008022 protein C-terminus binding(GO:0008022)
0.1 1.1 GO:0003684 damaged DNA binding(GO:0003684)
0.1 18.0 GO:0043565 sequence-specific DNA binding(GO:0043565)
0.1 1.0 GO:0046961 proton-transporting ATPase activity, rotational mechanism(GO:0046961)
0.1 0.7 GO:0008097 5S rRNA binding(GO:0008097)
0.1 0.9 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.1 0.3 GO:0048029 monosaccharide binding(GO:0048029)
0.1 1.3 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.1 0.3 GO:0016849 phosphorus-oxygen lyase activity(GO:0016849)
0.1 4.0 GO:0004540 ribonuclease activity(GO:0004540)
0.0 2.0 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 2.4 GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds(GO:0016810)
0.0 0.4 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.0 0.2 GO:0050291 sphingosine N-acyltransferase activity(GO:0050291)
0.0 0.3 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.0 2.7 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.1 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.0 0.1 GO:0008905 mannose-phosphate guanylyltransferase activity(GO:0008905)
0.0 0.1 GO:0019825 oxygen binding(GO:0019825)
0.0 0.7 GO:0016832 aldehyde-lyase activity(GO:0016832)
0.0 0.4 GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor(GO:0016671)
0.0 0.1 GO:0008131 primary amine oxidase activity(GO:0008131)
0.0 0.1 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.0 1.3 GO:0003779 actin binding(GO:0003779)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
2.0 5.9 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
1.9 1.9 PID HIF2PATHWAY HIF-2-alpha transcription factor network
1.8 5.3 PID NFAT TFPATHWAY Calcineurin-regulated NFAT-dependent transcription in lymphocytes
1.6 4.9 PID IL12 2PATHWAY IL12-mediated signaling events
0.9 0.9 PID MYC PATHWAY C-MYC pathway
0.8 9.3 PID RAC1 PATHWAY RAC1 signaling pathway
0.8 3.3 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.8 0.8 PID RAS PATHWAY Regulation of Ras family activation
0.5 0.5 PID PDGFRA PATHWAY PDGFR-alpha signaling pathway
0.5 1.4 PID TAP63 PATHWAY Validated transcriptional targets of TAp63 isoforms
0.4 1.2 PID AMB2 NEUTROPHILS PATHWAY amb2 Integrin signaling
0.4 1.8 PID AP1 PATHWAY AP-1 transcription factor network
0.3 1.0 PID ATF2 PATHWAY ATF-2 transcription factor network
0.3 2.0 PID P73PATHWAY p73 transcription factor network
0.3 1.2 PID VEGF VEGFR PATHWAY VEGF and VEGFR signaling network
0.3 1.6 PID ERA GENOMIC PATHWAY Validated nuclear estrogen receptor alpha network
0.2 0.8 PID KIT PATHWAY Signaling events mediated by Stem cell factor receptor (c-Kit)
0.2 0.5 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.1 0.6 PID BARD1 PATHWAY BARD1 signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.8 12.7 REACTOME RESOLUTION OF AP SITES VIA THE MULTIPLE NUCLEOTIDE PATCH REPLACEMENT PATHWAY Genes involved in Resolution of AP sites via the multiple-nucleotide patch replacement pathway
1.5 7.6 REACTOME L1CAM INTERACTIONS Genes involved in L1CAM interactions
1.3 3.8 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
1.2 3.6 REACTOME TRANSPORT OF MATURE TRANSCRIPT TO CYTOPLASM Genes involved in Transport of Mature Transcript to Cytoplasm
1.1 1.1 REACTOME DOUBLE STRAND BREAK REPAIR Genes involved in Double-Strand Break Repair
1.0 3.1 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
1.0 3.1 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
1.0 3.0 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
1.0 6.0 REACTOME APOPTOSIS Genes involved in Apoptosis
0.9 2.8 REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha
0.8 2.4 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.8 4.6 REACTOME INTERFERON SIGNALING Genes involved in Interferon Signaling
0.8 3.0 REACTOME CITRIC ACID CYCLE TCA CYCLE Genes involved in Citric acid cycle (TCA cycle)
0.8 4.5 REACTOME BIOLOGICAL OXIDATIONS Genes involved in Biological oxidations
0.7 2.2 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER
0.5 6.9 REACTOME FATTY ACID TRIACYLGLYCEROL AND KETONE BODY METABOLISM Genes involved in Fatty acid, triacylglycerol, and ketone body metabolism
0.4 3.5 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.4 1.2 REACTOME PYRUVATE METABOLISM AND CITRIC ACID TCA CYCLE Genes involved in Pyruvate metabolism and Citric Acid (TCA) cycle
0.4 1.9 REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION Genes involved in Antigen processing: Ubiquitination & Proteasome degradation
0.4 1.1 REACTOME NEUROTRANSMITTER RECEPTOR BINDING AND DOWNSTREAM TRANSMISSION IN THE POSTSYNAPTIC CELL Genes involved in Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell
0.3 1.4 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.2 4.4 REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX Genes involved in Formation of the ternary complex, and subsequently, the 43S complex
0.2 5.6 REACTOME METABOLISM OF LIPIDS AND LIPOPROTEINS Genes involved in Metabolism of lipids and lipoproteins
0.2 0.8 REACTOME SIGNALING BY SCF KIT Genes involved in Signaling by SCF-KIT
0.1 0.8 REACTOME PLATELET ACTIVATION SIGNALING AND AGGREGATION Genes involved in Platelet activation, signaling and aggregation
0.1 0.2 REACTOME HIV INFECTION Genes involved in HIV Infection
0.0 0.1 REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS Genes involved in Association of TriC/CCT with target proteins during biosynthesis