Project

GSE43616: Time-course of wild-type Arabidopsis leaf

Navigation
Downloads

Results for AT5G13910

Z-value: 1.14

Transcription factors associated with AT5G13910

Gene Symbol Gene ID Gene Info
AT5G13910
AT5G13910 Integrase-type DNA-binding superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
LEParTal_v1_Chr5_-_4483247_4483247-0.096.5e-01Click!

Activity profile of AT5G13910 motif

Sorted Z-values of AT5G13910 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr1_-_5645443_5645443 5.32 AT1G16510.1
AT1G16510
SAUR-like auxin-responsive protein family
arTal_v1_Chr1_+_6100964_6101015 5.29 AT1G17745.1
AT1G17745.2
PGDH
D-3-phosphoglycerate dehydrogenase
arTal_v1_Chr1_+_8164959_8164959 5.05 AT1G23040.3
AT1G23040.2
AT1G23040
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr4_+_17440177_17440177 4.96 AT4G36990.1
HSF4
heat shock factor 4
arTal_v1_Chr5_+_26772644_26772644 4.86 AT5G67080.1
MAPKKK19
mitogen-activated protein kinase kinase kinase 19
arTal_v1_Chr1_+_8164782_8164782 4.73 AT1G23040.1
AT1G23040
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr4_+_7239200_7239200 4.65 AT4G12080.1
AHL1
AT-hook motif nuclear-localized protein 1
arTal_v1_Chr1_-_17266724_17266824 4.52 AT1G46768.3
AT1G46768.2
AT1G46768.1
RAP2.1
related to AP2 1
arTal_v1_Chr1_-_24362054_24362054 4.21 AT1G65520.1
ECI1
delta(3), delta(2)-enoyl CoA isomerase 1
arTal_v1_Chr4_+_12977192_12977341 4.16 AT4G25390.1
AT4G25390.2
AT4G25390
Protein kinase superfamily protein
arTal_v1_Chr1_+_4416315_4416315 4.06 AT1G12940.1
NRT2.5
nitrate transporter2.5
arTal_v1_Chr2_+_8998450_8998450 3.77 AT2G20920.1
AT2G20920
chaperone (DUF3353)
arTal_v1_Chr3_+_16383595_16383595 3.74 AT3G44880.1
ACD1
Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein
arTal_v1_Chr5_-_315405_315405 3.57 AT5G01820.1
SR1
serine/threonine protein kinase 1
arTal_v1_Chr4_-_12890261_12890262 3.51 AT4G25110.2
AT4G25110.1
MC2
metacaspase 2
arTal_v1_Chr4_-_15507176_15507312 3.50 AT4G32070.2
AT4G32070.1
Phox4
Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
arTal_v1_Chr1_+_5090809_5090809 3.46 AT1G14780.1
AT1G14780
MAC/Perforin domain-containing protein
arTal_v1_Chr5_-_24317935_24317935 3.40 AT5G60460.2
AT5G60460
Preprotein translocase Sec, Sec61-beta subunit protein
arTal_v1_Chr1_-_18477643_18477643 3.38 AT1G49900.1
AT1G49900
C2H2 type zinc finger transcription factor family
arTal_v1_Chr1_-_19690589_19690589 3.37 AT1G52880.1
NAM
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
arTal_v1_Chr1_-_498539_498539 3.36 AT1G02450.1
NIMIN1
NIM1-interacting 1
arTal_v1_Chr5_-_24318241_24318241 3.34 AT5G60460.1
AT5G60460
Preprotein translocase Sec, Sec61-beta subunit protein
arTal_v1_Chr3_-_1791887_1791887 3.30 AT3G05970.1
LACS6
long-chain acyl-CoA synthetase 6
arTal_v1_Chr5_-_4722371_4722371 3.27 AT5G14640.1
SK13
shaggy-like kinase 13
arTal_v1_Chr5_-_4722048_4722048 3.19 AT5G14640.2
SK13
shaggy-like kinase 13
arTal_v1_Chr2_-_11685342_11685342 3.13 AT2G27310.1
AT2G27310
F-box family protein
arTal_v1_Chr5_-_19977620_19977620 3.11 AT5G49280.1
AT5G49280
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr1_-_30142697_30142697 3.09 AT1G80130.1
AT1G80130
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr1_-_29465249_29465249 3.08 AT1G78310.1
AT1G78310
VQ motif-containing protein
arTal_v1_Chr4_+_13847549_13847549 3.04 AT4G27780.2
AT4G27780.1
ACBP2
acyl-CoA binding protein 2
arTal_v1_Chr5_+_25692425_25692425 3.00 AT5G64230.1
AT5G64230
1,8-cineole synthase
arTal_v1_Chr1_-_25445357_25445357 2.98 AT1G67860.1
AT1G67860
transmembrane protein
arTal_v1_Chr3_+_6536534_6536534 2.98 AT3G18950.1
AT3G18950
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr1_-_9956960_9956980 2.97 AT1G28370.1
AT1G28370.2
ERF11
ERF domain protein 11
arTal_v1_Chr2_+_15750915_15750915 2.96 AT2G37530.1
AT2G37530
forkhead box protein G1
arTal_v1_Chr4_-_9920511_9920511 2.89 AT4G17840.1
AT4G17840
CAAX protease self-immunity protein
arTal_v1_Chr2_-_16115204_16115204 2.85 AT2G38490.1
CIPK22
CBL-interacting Serine/Threonine-kinase
arTal_v1_Chr1_-_27640643_27640643 2.83 AT1G73500.1
MKK9
MAP kinase kinase 9
arTal_v1_Chr5_+_25721733_25721733 2.80 AT5G64310.1
AGP1
arabinogalactan protein 1
arTal_v1_Chr5_-_26531176_26531176 2.79 AT5G66440.1
AT5G66440
tRNA-methyltransferase non-catalytic subunit trm6MTase subunit
arTal_v1_Chr5_-_23725585_23725585 2.74 AT5G58730.1
Mik
pfkB-like carbohydrate kinase family protein
arTal_v1_Chr2_+_15514923_15514923 2.71 AT2G36950.1
AT2G36950
Heavy metal transport/detoxification superfamily protein
arTal_v1_Chr3_+_19431095_19431095 2.67 AT3G52430.1
PAD4
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr2_+_15592552_15592552 2.59 AT2G37110.1
AT2G37110
PLAC8 family protein
arTal_v1_Chr5_-_4474530_4474530 2.58 AT5G13860.1
ELC-Like
ELCH-like protein
arTal_v1_Chr2_+_621058_621180 2.58 AT2G02370.1
AT2G02370.3
AT2G02370.2
AT2G02370
SNARE associated Golgi protein family
arTal_v1_Chr1_+_28163344_28163344 2.57 AT1G75000.1
AT1G75000
GNS1/SUR4 membrane protein family
arTal_v1_Chr2_-_17422747_17422747 2.47 AT2G41750.1
AT2G41750
DTW domain-containing protein
arTal_v1_Chr5_+_7090704_7090704 2.44 AT5G20900.1
JAZ12
jasmonate-zim-domain protein 12
arTal_v1_Chr3_+_590425_590425 2.43 AT3G02740.1
AT3G02740.2
AT3G02740
Eukaryotic aspartyl protease family protein
arTal_v1_Chr2_-_9706217_9706217 2.42 AT2G22800.1
HAT9
Homeobox-leucine zipper protein family
arTal_v1_Chr1_+_27397089_27397089 2.41 AT1G72800.1
AT1G72800
RNA-binding (RRM/RBD/RNP motifs) family protein
arTal_v1_Chr1_-_25446952_25446952 2.41 AT1G67865.1
AT1G67865
hypothetical protein
arTal_v1_Chr1_-_25447622_25447622 2.40 AT1G67865.2
AT1G67865
hypothetical protein
arTal_v1_Chr2_+_114926_114926 2.32 AT2G01190.1
PDE331
Octicosapeptide/Phox/Bem1p family protein
arTal_v1_Chr1_+_9951762_9951762 2.30 AT1G28360.1
ERF12
ERF domain protein 12
arTal_v1_Chr2_-_9266393_9266393 2.28 AT2G21660.2
GRP7
cold, circadian rhythm, and rna binding 2
arTal_v1_Chr1_+_11844660_11844666 2.25 AT1G32740.2
AT1G32740.1
AT1G32740.3
AT1G32740
SBP (S-ribonuclease binding protein) family protein
arTal_v1_Chr2_-_9266557_9266557 2.24 AT2G21660.1
GRP7
cold, circadian rhythm, and rna binding 2
arTal_v1_Chr4_-_15339613_15339613 2.19 AT4G31670.1
UBP18
ubiquitin-specific protease 18
arTal_v1_Chr1_+_27784928_27784928 2.19 AT1G73880.1
UGT89B1
UDP-glucosyl transferase 89B1
arTal_v1_Chr3_-_1002595_1002595 2.17 AT3G03890.1
AT3G03890
FMN binding protein
arTal_v1_Chr5_-_5358789_5358789 2.17 AT5G16370.1
AAE5
acyl activating enzyme 5
arTal_v1_Chr2_+_7564240_7564276 2.17 AT2G17420.1
AT2G17420.2
NTRA
NADPH-dependent thioredoxin reductase A
arTal_v1_Chr3_-_1002083_1002083 2.16 AT3G03890.2
AT3G03890
FMN binding protein
arTal_v1_Chr5_-_7636576_7636576 2.16 AT5G22850.1
AT5G22850
Eukaryotic aspartyl protease family protein
arTal_v1_Chr5_+_21505074_21505074 2.15 AT5G53030.1
AT5G53030.2
AT5G53030
hypothetical protein
arTal_v1_Chr4_+_7731189_7731189 2.11 AT4G13270.1
AT4G13270
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
arTal_v1_Chr4_+_16997091_16997091 2.10 AT4G35890.2
AT4G35890.1
LARP1c
winged-helix DNA-binding transcription factor family protein
arTal_v1_Chr5_-_16913991_16913991 2.10 AT5G42300.1
UBL5
ubiquitin-like protein 5
arTal_v1_Chr3_+_6820926_6820926 2.10 AT3G19640.1
MGT4
magnesium transporter 4
arTal_v1_Chr1_+_12004854_12004927 2.09 AT1G33110.1
AT1G33110.2
AT1G33110
MATE efflux family protein
arTal_v1_Chr3_-_7445303_7445312 2.07 AT3G21215.2
AT3G21215.3
AT3G21215.4
AT3G21215.1
AT3G21215
RNA-binding (RRM/RBD/RNP motifs) family protein
arTal_v1_Chr5_+_4756057_4756057 2.03 AT5G14730.1
AT5G14730
hypothetical protein
arTal_v1_Chr2_+_1156593_1156657 1.99 AT2G03800.2
AT2G03800.1
GEK1
D-aminoacyl-tRNA deacylase
arTal_v1_Chr4_-_9871646_9871646 1.96 AT4G17750.1
HSF1
heat shock factor 1
arTal_v1_Chr1_+_17432433_17432500 1.96 AT1G47500.1
AT1G47500.2
RBP47C'
RNA-binding protein 47C'
arTal_v1_Chr2_-_10988924_10988924 1.95 AT2G25760.2
AT2G25760
Protein kinase family protein
arTal_v1_Chr1_+_29502506_29502582 1.94 AT1G78410.1
AT1G78410.2
AT1G78410
VQ motif-containing protein
arTal_v1_Chr1_+_22409298_22409298 1.94 AT1G60870.1
MEE9
maternal effect embryo arrest 9
arTal_v1_Chr2_+_11669629_11669629 1.93 AT2G27260.1
AT2G27260
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
arTal_v1_Chr2_+_15928591_15928591 1.93 AT2G38070.1
AT2G38070
LOW protein: UPF0503-like protein, putative (DUF740)
arTal_v1_Chr2_-_10989117_10989117 1.92 AT2G25760.1
AT2G25760
Protein kinase family protein
arTal_v1_Chr5_-_20506354_20506354 1.91 AT5G50360.1
AT5G50360
von willebrand factor A domain protein
arTal_v1_Chr2_-_16042383_16042521 1.87 AT2G38290.2
AT2G38290.1
AMT2
ammonium transporter 2
arTal_v1_Chr3_-_10977527_10977527 1.84 AT3G28950.1
AT3G28950
AIG2-like (avirulence induced gene) family protein
arTal_v1_Chr1_-_2013459_2013545 1.82 AT1G06570.1
AT1G06570.2
PDS1
4-hydroxyphenylpyruvate dioxygenase
arTal_v1_Chr5_+_2560328_2560328 1.81 AT5G07990.1
TT7
Cytochrome P450 superfamily protein
arTal_v1_Chr2_-_13835758_13835758 1.81 AT2G32600.1
AT2G32600
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr5_+_26045327_26045327 1.81 AT5G65180.2
AT5G65180.1
AT5G65180
ENTH/VHS family protein
arTal_v1_Chr2_-_11777529_11777553 1.80 AT2G27580.2
AT2G27580.1
AT2G27580
A20/AN1-like zinc finger family protein
arTal_v1_Chr5_+_7946285_7946285 1.78 AT5G23575.1
AT5G23575
Transmembrane CLPTM1 family protein
arTal_v1_Chr4_+_14409772_14409871 1.74 AT4G29230.1
AT4G29230.2
AT4G29230.3
NAC075
NAC domain containing protein 75
arTal_v1_Chr4_+_9759203_9759203 1.73 AT4G17500.1
ERF-1
ethylene responsive element binding factor 1
arTal_v1_Chr3_+_6251315_6251315 1.70 AT3G18230.1
AT3G18230
Octicosapeptide/Phox/Bem1p family protein
arTal_v1_Chr1_-_22794714_22794714 1.66 AT1G61730.1
AT1G61730
DNA-binding storekeeper protein-related transcriptional regulator
arTal_v1_Chr3_-_5618322_5618322 1.60 AT3G16510.1
AT3G16510
Calcium-dependent lipid-binding (CaLB domain) family protein
arTal_v1_Chr4_-_8305857_8305857 1.59 AT4G14430.1
IBR10
indole-3-butyric acid response 10
arTal_v1_Chr1_-_2467058_2467165 1.58 AT1G07950.1
AT1G07950.2
MED22B
Surfeit locus protein 5 subunit 22 of Mediator complex
arTal_v1_Chr1_+_954290_954290 1.58 AT1G03790.1
SOM
Zinc finger C-x8-C-x5-C-x3-H type family protein
arTal_v1_Chr1_+_11844988_11844988 1.58 AT1G32740.4
AT1G32740
SBP (S-ribonuclease binding protein) family protein
arTal_v1_Chr1_-_11222789_11222827 1.57 AT1G31350.1
AT1G31350.2
KUF1
KAR-UP F-box 1
arTal_v1_Chr1_+_27026677_27026729 1.56 AT1G71860.1
AT1G71860.3
AT1G71860.2
PTP1
protein tyrosine phosphatase 1
arTal_v1_Chr4_+_9891051_9891051 1.54 AT4G17790.1
AT4G17790
SNARE associated Golgi protein family
arTal_v1_Chr1_+_345516_345516 1.53 AT1G02000.1
GAE2
UDP-D-glucuronate 4-epimerase 2
arTal_v1_Chr2_+_18795926_18795988 1.53 AT2G45630.1
AT2G45630.2
AT2G45630
D-isomer specific 2-hydroxyacid dehydrogenase family protein
arTal_v1_Chr4_-_8369312_8369312 1.50 AT4G14580.1
CIPK4
CBL-interacting protein kinase 4
arTal_v1_Chr1_+_3363432_3363432 1.49 AT1G10270.1
GRP23
glutamine-rich protein 23
arTal_v1_Chr1_-_11595982_11596056 1.48 AT1G32190.2
AT1G32190.1
AT1G32190
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr3_-_1261634_1261683 1.47 AT3G04640.2
AT3G04640.1
AT3G04640.3
AT3G04640
glycine-rich protein
arTal_v1_Chr1_+_2304435_2304435 1.47 AT1G07510.1
ftsh10
FTSH protease 10
arTal_v1_Chr2_+_216605_216695 1.45 AT2G01480.1
AT2G01480.2
AT2G01480
O-fucosyltransferase family protein
arTal_v1_Chr1_+_23740493_23740562 1.45 AT1G63980.1
AT1G63980.2
AT1G63980
D111/G-patch domain-containing protein
arTal_v1_Chr2_+_1025_1025 1.45 AT2G01008.1
AT2G01008
maternal effect embryo arrest protein
arTal_v1_Chr5_+_22388782_22388782 1.43 AT5G55180.2
AT5G55180
O-Glycosyl hydrolases family 17 protein
arTal_v1_Chr3_+_17867131_17867131 1.43 AT3G48240.1
AT3G48240
Octicosapeptide/Phox/Bem1p family protein
arTal_v1_Chr1_-_2406049_2406049 1.43 AT1G07750.1
AT1G07750
RmlC-like cupins superfamily protein
arTal_v1_Chr5_-_1918896_1918993 1.41 AT5G06280.3
AT5G06280.1
AT5G06280
hypothetical protein
arTal_v1_Chr5_-_20544857_20544857 1.41 AT5G50450.1
AT5G50450
HCP-like superfamily protein with MYND-type zinc finger
arTal_v1_Chr4_+_17388649_17388649 1.41 AT4G36900.1
RAP2.10
related to AP2 10
arTal_v1_Chr5_+_22388521_22388521 1.37 AT5G55180.1
AT5G55180
O-Glycosyl hydrolases family 17 protein
arTal_v1_Chr5_+_9149073_9149172 1.36 AT5G26180.1
AT5G26180.2
AT5G26180.4
AT5G26180.3
AT5G26180.5
AT5G26180
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr5_+_17731005_17731005 1.33 AT5G44060.1
AT5G44060
embryo sac development arrest protein
arTal_v1_Chr5_-_37999_37999 1.32 AT5G01100.1
FRB1
O-fucosyltransferase family protein
arTal_v1_Chr3_-_10941833_10941833 1.32 AT3G28920.1
HB34
homeobox protein 34
arTal_v1_Chr2_-_9767_9767 1.31 AT2G01023.1
AT2G01023
hypothetical protein
arTal_v1_Chr3_-_1617339_1617339 1.30 AT3G05570.1
AT3G05570
dipeptide transport ATP-binding protein
arTal_v1_Chr1_-_1399053_1399122 1.28 AT1G04930.3
AT1G04930.2
AT1G04930.1
AT1G04930
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr5_-_3148400_3148400 1.27 AT5G10060.1
AT5G10060
ENTH/VHS family protein
arTal_v1_Chr1_+_2762584_2762590 1.27 AT1G08680.4
AT1G08680.1
AT1G08680.3
AT1G08680.2
AT1G08680.5
ZIGA4
ARF GAP-like zinc finger-containing protein ZIGA4
arTal_v1_Chr3_+_5341356_5341356 1.26 AT3G15780.1
AT3G15780
transmembrane protein
arTal_v1_Chr5_+_3931349_3931484 1.25 AT5G12170.2
AT5G12170.3
CLT3
CRT (chloroquine-resistance transporter)-like transporter 3
arTal_v1_Chr2_+_19079305_19079305 1.25 AT2G46490.1
AT2G46490
hypothetical protein
arTal_v1_Chr4_-_16853035_16853035 1.25 AT4G35480.1
RHA3B
RING-H2 finger A3B
arTal_v1_Chr5_+_25831635_25831635 1.25 AT5G64620.1
C/VIF2
cell wall / vacuolar inhibitor of fructosidase 2
arTal_v1_Chr4_-_7386931_7386931 1.22 AT4G12450.1
AT4G12450
zinc finger (C2H2 type) family protein
arTal_v1_Chr1_+_25016402_25016402 1.20 AT1G67030.1
ZFP6
zinc finger protein 6
arTal_v1_Chr2_-_17613591_17613660 1.19 AT2G42280.2
AT2G42280.3
AT2G42280.1
FBH4
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr2_+_4802783_4802793 1.18 AT2G11890.2
AT2G11890.1
AT2G11890
adenylate cyclase
arTal_v1_Chr1_+_26814260_26814260 1.17 AT1G71100.1
RSW10
Ribose 5-phosphate isomerase, type A protein
arTal_v1_Chr3_+_17558793_17558793 1.15 AT3G47620.1
TCP14
TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14
arTal_v1_Chr2_+_18606410_18606410 1.14 AT2G45130.1
SPX3
SPX domain protein 3
arTal_v1_Chr2_+_19011462_19011462 1.14 AT2G46310.1
CRF5
cytokinin response factor 5
arTal_v1_Chr1_+_20895582_20895585 1.13 AT1G55870.3
AT1G55870.4
AT1G55870.1
AT1G55870.2
AHG2
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
arTal_v1_Chr3_-_6716178_6716178 1.12 AT3G19380.1
PUB25
plant U-box 25
arTal_v1_Chr3_-_3663986_3663986 1.11 AT3G11591.1
AT3G11591
bric-a-brac protein
arTal_v1_Chr5_-_3065889_3065889 1.11 AT5G09850.2
AT5G09850.1
AT5G09850.3
AT5G09850.4
AT5G09850.5
AT5G09850
Transcription elongation factor (TFIIS) family protein
arTal_v1_Chr1_-_23801720_23801799 1.10 AT1G64110.1
AT1G64110.3
AT1G64110.2
DAA1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr5_+_251686_251686 1.08 AT5G01670.2
AT5G01670.1
AT5G01670
NAD(P)-linked oxidoreductase superfamily protein
arTal_v1_Chr2_-_10905267_10905287 1.07 AT2G25620.2
AT2G25620.1
DBP1
DNA-binding protein phosphatase 1
arTal_v1_Chr4_-_9199840_9199840 1.05 AT4G16250.1
PHYD
phytochrome D
arTal_v1_Chr3_-_4660945_4660945 1.05 AT3G14067.1
AT3G14067
Subtilase family protein
arTal_v1_Chr1_-_30304428_30304428 1.02 AT1G80610.1
AT1G80610
hypothetical protein
arTal_v1_Chr3_+_22645492_22645492 1.01 AT3G61180.1
AT3G61180
RING/U-box superfamily protein
arTal_v1_Chr3_-_21685974_21686039 1.01 AT3G58630.2
AT3G58630.1
AT3G58630
sequence-specific DNA binding transcription factor
arTal_v1_Chr5_-_8982873_8982891 1.00 AT5G25800.2
AT5G25800.1
AT5G25800
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
arTal_v1_Chr1_-_29027108_29027108 1.00 AT1G77260.1
AT1G77260
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr1_+_8242369_8242369 0.99 AT1G23220.1
AT1G23220
Dynein light chain type 1 family protein
arTal_v1_Chr5_+_11713113_11713113 0.98 AT5G31787.1
AT5G31787

arTal_v1_Chr1_+_25325138_25325140 0.97 AT1G67570.1
AT1G67570.2
AT1G67570
zinc finger CONSTANS-like protein (DUF3537)
arTal_v1_Chr5_+_395567_395567 0.96 AT5G02030.1
RPL
POX (plant homeobox) family protein
arTal_v1_Chr1_+_27394598_27394598 0.96 AT1G72790.1
AT1G72790
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr3_+_8152038_8152038 0.95 AT3G22970.2
AT3G22970.1
AT3G22970
hypothetical protein (DUF506)
arTal_v1_Chr3_+_677240_677240 0.95 AT3G03000.1
AT3G03000
EF hand calcium-binding protein family
arTal_v1_Chr3_-_10147892_10147892 0.94 AT3G27416.1
AT3G27416
transmembrane protein
arTal_v1_Chr3_-_23301865_23301865 0.93 AT3G63060.1
EDL3
EID1-like 3
arTal_v1_Chr1_-_27026363_27026363 0.90 AT1G71850.1
AT1G71850
Ubiquitin carboxyl-terminal hydrolase family protein
arTal_v1_Chr5_+_8735944_8736074 0.90 AT5G25220.1
AT5G25220.2
KNAT3
homeobox protein knotted-1-like 3
arTal_v1_Chr2_+_9917443_9917520 0.90 AT2G23310.1
AT2G23310.2
ATRER1C1
Rer1 family protein
arTal_v1_Chr2_-_16038972_16038972 0.88 AT2G38280.2
AT2G38280.1
FAC1
AMP deaminase, putative / myoadenylate deaminase
arTal_v1_Chr3_+_6146015_6146058 0.87 AT3G17950.3
AT3G17950.1
AT3G17950.2
AT3G17950
transmembrane protein
arTal_v1_Chr3_+_2413623_2413642 0.86 AT3G07565.1
AT3G07565.3
AT3G07565.4
AT3G07565.2
AT3G07565
histone H2A deubiquitinase (DUF3755)
arTal_v1_Chr3_+_22818589_22818589 0.86 AT3G61670.1
AT3G61670.2
AT3G61670
extra-large G-like protein, putative (DUF3133)
arTal_v1_Chr5_+_1503232_1503232 0.85 AT5G05090.1
AT5G05090
Homeodomain-like superfamily protein
arTal_v1_Chr4_+_7042354_7042354 0.84 AT4G11660.1
AT-HSFB2B
winged-helix DNA-binding transcription factor family protein
arTal_v1_Chr1_+_29665166_29665166 0.84 AT1G78910.2
AT1G78910.1
AT1G78910
Pseudouridine synthase family protein
arTal_v1_Chr4_-_12725835_12725835 0.83 AT4G24660.1
HB22
homeobox protein 22
arTal_v1_Chr2_-_18907973_18908121 0.83 AT2G45950.2
AT2G45950.1
AT2G45950.3
SK20
SKP1-like 20
arTal_v1_Chr5_+_22341750_22341750 0.82 AT5G55060.2
AT5G55060.1
AT5G55060
Rab3 GTPase-activating protein catalytic subunit
arTal_v1_Chr1_-_21514022_21514022 0.82 AT1G58100.2
TCP8
TCP family transcription factor
arTal_v1_Chr5_+_7524086_7524086 0.81 AT5G22630.1
ADT5
arogenate dehydratase 5
arTal_v1_Chr1_-_21514189_21514189 0.81 AT1G58100.1
TCP8
TCP family transcription factor
arTal_v1_Chr3_+_16871578_16871578 0.79 AT3G45890.1
RUS1
root UVB sensitive-like protein (Protein of unknown function, DUF647)
arTal_v1_Chr5_+_23096024_23096024 0.79 AT5G57070.1
AT5G57070
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr2_-_14211693_14211693 0.78 AT2G33550.1
AT2G33550
Homeodomain-like superfamily protein
arTal_v1_Chr1_+_20901243_20901243 0.78 AT1G55890.1
AT1G55890
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr3_+_22331427_22331485 0.78 AT3G60410.2
AT3G60410.1
AT3G60410.3
AT3G60410
hypothetical protein (DUF1639)
arTal_v1_Chr3_+_5121303_5121303 0.77 AT3G15210.1
ERF4
ethylene responsive element binding factor 4
arTal_v1_Chr4_-_172845_172845 0.75 AT4G00390.1
AT4G00390
DNA-binding storekeeper protein-related transcriptional regulator
arTal_v1_Chr1_-_23801283_23801283 0.74 AT1G64110.5
AT1G64110.4
DAA1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr1_+_17424473_17424473 0.74 AT1G47490.2
AT1G47490.1
RBP47C
RNA-binding protein 47C
arTal_v1_Chr5_+_22957629_22957629 0.73 AT5G56750.1
NDL1
N-MYC downregulated-like 1
arTal_v1_Chr1_-_29492875_29492875 0.72 AT1G78390.1
NCED9
nine-cis-epoxycarotenoid dioxygenase 9
arTal_v1_Chr5_+_20255173_20255191 0.72 AT5G49840.3
AT5G49840.2
AT5G49840.4
AT5G49840.1
AT5G49840
ATP-dependent Clp protease
arTal_v1_Chr1_+_4556878_4556878 0.69 AT1G13300.1
HRS1
myb-like transcription factor family protein
arTal_v1_Chr2_-_18907477_18907477 0.69 AT2G45950.4
AT2G45950.5
SK20
SKP1-like 20
arTal_v1_Chr3_-_2524168_2524168 0.69 AT3G07910.1
AT3G07910
reactive oxygen species modulator-like protein
arTal_v1_Chr4_+_1573266_1573266 0.69 AT4G03550.1
GSL05
glucan synthase-like 5
arTal_v1_Chr3_-_6430517_6430517 0.68 AT3G18690.1
MKS1
MAP kinase substrate 1
arTal_v1_Chr5_-_25155983_25155983 0.66 AT5G62650.1
AT5G62650
Tic22-like family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G13910

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 5.3 GO:0006564 L-serine biosynthetic process(GO:0006564)
1.0 6.2 GO:1900367 positive regulation of defense response to insect(GO:1900367)
1.0 3.0 GO:0010288 response to lead ion(GO:0010288)
0.7 6.7 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.7 2.0 GO:0046416 D-amino acid metabolic process(GO:0046416)
0.6 1.9 GO:0015696 ammonium transport(GO:0015696)
0.4 4.0 GO:0071249 cellular response to nitrate(GO:0071249)
0.4 1.1 GO:0080040 positive regulation of cellular response to phosphate starvation(GO:0080040)
0.4 1.4 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.3 1.6 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
0.3 1.3 GO:0042939 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.3 2.7 GO:0033517 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.3 3.4 GO:0048317 seed morphogenesis(GO:0048317)
0.3 1.8 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.2 3.3 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.2 2.8 GO:0010120 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.2 2.1 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.2 0.6 GO:0072337 modified amino acid transport(GO:0072337)
0.2 0.8 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.2 3.7 GO:0015996 chlorophyll catabolic process(GO:0015996)
0.2 1.0 GO:2000576 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.2 0.7 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.2 3.4 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.2 1.0 GO:0048439 flower morphogenesis(GO:0048439)
0.1 1.0 GO:0009584 detection of visible light(GO:0009584)
0.1 1.2 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.1 0.4 GO:0055047 generative cell mitosis(GO:0055047)
0.1 2.4 GO:0071451 removal of superoxide radicals(GO:0019430) cellular response to oxygen radical(GO:0071450) cellular response to superoxide(GO:0071451)
0.1 0.9 GO:0009720 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.1 0.4 GO:0043970 histone H3-K9 acetylation(GO:0043970)
0.1 3.5 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.1 1.4 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.1 8.0 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.1 1.4 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.1 0.3 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.1 4.2 GO:0006635 fatty acid beta-oxidation(GO:0006635)
0.1 1.1 GO:0002697 regulation of immune effector process(GO:0002697) regulation of defense response to virus(GO:0050688)
0.1 3.1 GO:0031124 mRNA 3'-end processing(GO:0031124)
0.1 1.4 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.1 0.8 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.1 1.4 GO:2000032 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.1 0.7 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.1 0.8 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.1 1.7 GO:1905177 tracheary element differentiation(GO:1905177)
0.1 5.0 GO:0034605 cellular response to heat(GO:0034605)
0.1 1.8 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.1 0.7 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.1 0.9 GO:0006621 protein retention in ER lumen(GO:0006621)
0.1 3.5 GO:0009626 plant-type hypersensitive response(GO:0009626)
0.1 2.4 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.1 0.9 GO:0043101 IMP biosynthetic process(GO:0006188) purine nucleotide salvage(GO:0032261) purine-containing compound salvage(GO:0043101)
0.1 6.3 GO:0010200 response to chitin(GO:0010200)
0.1 1.6 GO:0031348 negative regulation of defense response(GO:0031348)
0.1 1.2 GO:0010229 inflorescence development(GO:0010229)
0.0 1.2 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 1.3 GO:1903338 regulation of cell wall organization or biogenesis(GO:1903338)
0.0 1.8 GO:0048235 pollen sperm cell differentiation(GO:0048235)
0.0 1.4 GO:0043547 positive regulation of GTPase activity(GO:0043547)
0.0 2.6 GO:0009873 ethylene-activated signaling pathway(GO:0009873)
0.0 0.8 GO:0010187 negative regulation of seed germination(GO:0010187)
0.0 0.5 GO:0032544 plastid translation(GO:0032544)
0.0 0.9 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.0 5.0 GO:0009408 response to heat(GO:0009408)
0.0 3.4 GO:0080167 response to karrikin(GO:0080167)
0.0 1.2 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.0 5.4 GO:0050832 defense response to fungus(GO:0050832)
0.0 2.2 GO:0016579 protein deubiquitination(GO:0016579)
0.0 3.0 GO:0019760 S-glycoside metabolic process(GO:0016143) glycosinolate metabolic process(GO:0019757) glucosinolate metabolic process(GO:0019760)
0.0 0.3 GO:0015749 monosaccharide transport(GO:0015749)
0.0 0.6 GO:0009880 embryonic pattern specification(GO:0009880)
0.0 0.9 GO:0043269 regulation of ion transport(GO:0043269)
0.0 0.5 GO:0061572 microsporogenesis(GO:0009556) actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.0 0.5 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.0 2.1 GO:0009753 response to jasmonic acid(GO:0009753)
0.0 4.6 GO:0009414 response to water deprivation(GO:0009414)
0.0 2.1 GO:0000398 mRNA splicing, via spliceosome(GO:0000398)
0.0 0.6 GO:0010102 post-embryonic root morphogenesis(GO:0010101) lateral root morphogenesis(GO:0010102)
0.0 1.0 GO:0048573 photoperiodism, flowering(GO:0048573)
0.0 0.1 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 6.7 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
1.0 3.0 GO:0009514 glyoxysome(GO:0009514)
0.3 2.6 GO:0000813 ESCRT I complex(GO:0000813)
0.2 1.3 GO:0017053 transcriptional repressor complex(GO:0017053)
0.2 1.0 GO:0030286 dynein complex(GO:0030286)
0.2 2.1 GO:0005844 polysome(GO:0005844)
0.1 2.4 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.1 0.4 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 0.6 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.1 1.8 GO:0005686 U2 snRNP(GO:0005686)
0.1 3.7 GO:0009706 chloroplast inner membrane(GO:0009706)
0.1 7.8 GO:0044216 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.1 1.4 GO:0031307 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.8 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 3.1 GO:0016591 DNA-directed RNA polymerase II, holoenzyme(GO:0016591)
0.0 1.6 GO:0016592 mediator complex(GO:0016592)
0.0 2.6 GO:0098687 chromosomal region(GO:0098687)
0.0 4.0 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 11.3 GO:0005777 peroxisome(GO:0005777) microbody(GO:0042579)
0.0 0.7 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.0 2.9 GO:0005759 mitochondrial matrix(GO:0005759)
0.0 0.9 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.5 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.5 GO:0009574 preprophase band(GO:0009574)
0.0 1.5 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.9 GO:0000325 plant-type vacuole(GO:0000325)
0.0 4.5 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.3 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 0.4 GO:0000123 histone acetyltransferase complex(GO:0000123)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.3 5.3 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
1.2 5.8 GO:0004165 dodecenoyl-CoA delta-isomerase activity(GO:0004165)
0.9 4.7 GO:0003680 AT DNA binding(GO:0003680)
0.8 3.0 GO:0032791 lead ion binding(GO:0032791)
0.7 3.7 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.7 6.7 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.6 1.9 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.4 2.2 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
0.4 1.1 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
0.3 8.0 GO:0097602 cullin family protein binding(GO:0097602)
0.3 4.0 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.3 2.1 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.3 1.2 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.3 3.3 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.2 1.4 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.2 1.1 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.2 1.6 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.2 2.8 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.2 0.6 GO:0008517 folic acid transporter activity(GO:0008517)
0.2 1.0 GO:0009883 red or far-red light photoreceptor activity(GO:0009883)
0.2 3.1 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.2 1.0 GO:0051959 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.2 0.6 GO:0045430 chalcone isomerase activity(GO:0045430)
0.2 0.7 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.1 2.1 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.1 0.8 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 2.9 GO:0008143 poly(A) binding(GO:0008143)
0.1 2.5 GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)
0.1 0.4 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.1 1.1 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.1 2.1 GO:0031386 protein tag(GO:0031386)
0.1 11.0 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.1 5.7 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.1 8.9 GO:0019900 kinase binding(GO:0019900)
0.1 0.5 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.0 2.6 GO:0005096 GTPase activator activity(GO:0005096)
0.0 0.8 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.8 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 2.2 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 1.4 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 1.9 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.0 1.6 GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding(GO:0000981)
0.0 1.2 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.5 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.2 GO:0016161 beta-amylase activity(GO:0016161)
0.0 0.3 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.0 1.0 GO:0004527 exonuclease activity(GO:0004527)
0.0 0.4 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.5 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 5.7 GO:0000975 regulatory region DNA binding(GO:0000975) transcription regulatory region sequence-specific DNA binding(GO:0000976) regulatory region nucleic acid binding(GO:0001067) transcription regulatory region DNA binding(GO:0044212)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.0 PID P73PATHWAY p73 transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 4.2 REACTOME FATTY ACID TRIACYLGLYCEROL AND KETONE BODY METABOLISM Genes involved in Fatty acid, triacylglycerol, and ketone body metabolism