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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G15210

Z-value: 0.36

Transcription factors associated with AT5G15210

Gene Symbol Gene ID Gene Info
AT5G15210
AT5G15210 homeobox protein 30

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
HB30arTal_v1_Chr5_-_4939207_4939207-0.598.5e-04Click!

Activity profile of AT5G15210 motif

Sorted Z-values of AT5G15210 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr5_+_24167996_24168072 1.52 AT5G60020.1
AT5G60020.2
LAC17
laccase 17
arTal_v1_Chr5_+_24168245_24168245 1.17 AT5G60020.3
LAC17
laccase 17
arTal_v1_Chr4_-_10316886_10316886 1.16 AT4G18780.1
IRX1
cellulose synthase family protein
arTal_v1_Chr5_+_25050679_25050679 0.81 AT5G62380.2
NAC101
NAC-domain protein 101
arTal_v1_Chr3_-_6421983_6422141 0.77 AT3G18660.1
AT3G18660.3
AT3G18660.2
PGSIP1
plant glycogenin-like starch initiation protein 1
arTal_v1_Chr5_-_24422274_24422274 0.74 AT5G60720.1
AT5G60720
electron transporter, putative (Protein of unknown function, DUF547)
arTal_v1_Chr5_+_25050152_25050152 0.74 AT5G62380.1
NAC101
NAC-domain protein 101
arTal_v1_Chr2_-_15589369_15589369 0.65 AT2G37090.1
IRX9
Nucleotide-diphospho-sugar transferases superfamily protein
arTal_v1_Chr3_+_3203988_3203988 0.60 AT3G10340.1
PAL4
phenylalanine ammonia-lyase 4
arTal_v1_Chr2_-_14644355_14644355 0.53 AT2G34710.1
PHB
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
arTal_v1_Chr2_-_17060652_17060652 0.39 AT2G40890.1
CYP98A3
cytochrome P450, family 98, subfamily A, polypeptide 3
arTal_v1_Chr1_-_19161737_19161737 0.34 AT1G51680.1
4CL1
4-coumarate:CoA ligase 1
arTal_v1_Chr1_-_19161552_19161552 0.34 AT1G51680.3
AT1G51680.2
4CL1
4-coumarate:CoA ligase 1

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G15210

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.6 GO:0090058 metaxylem development(GO:0090058)
0.3 1.2 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.1 0.4 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.1 1.4 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.1 0.6 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.1 0.5 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.0 2.7 GO:0009809 lignin biosynthetic process(GO:0009809)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.6 GO:0009531 secondary cell wall(GO:0009531)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.7 GO:0047517 1,4-beta-D-xylan synthase activity(GO:0047517)
0.2 0.8 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.1 0.6 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.1 0.4 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.1 2.7 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 0.7 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 1.2 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)