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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G25190

Z-value: 1.64

Transcription factors associated with AT5G25190

Gene Symbol Gene ID Gene Info
AT5G25190
AT5G25190 Integrase-type DNA-binding superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ESE3arTal_v1_Chr5_-_8707885_87078850.633.5e-04Click!

Activity profile of AT5G25190 motif

Sorted Z-values of AT5G25190 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr4_-_18098633_18098633 8.91 AT4G38770.1
PRP4
proline-rich protein 4
arTal_v1_Chr2_+_14524607_14524607 8.47 AT2G34430.1
LHB1B1
light-harvesting chlorophyll-protein complex II subunit B1
arTal_v1_Chr4_+_13391293_13391344 7.22 AT4G26530.2
AT4G26530.1
FBA5
Aldolase superfamily protein
arTal_v1_Chr3_+_5505360_5505360 7.19 AT3G16240.1
DELTA-TIP
delta tonoplast integral protein
arTal_v1_Chr4_+_13390754_13390754 6.70 AT4G26530.3
FBA5
Aldolase superfamily protein
arTal_v1_Chr2_-_18744322_18744322 6.65 AT2G45470.1
FLA8
FASCICLIN-like arabinogalactan protein 8
arTal_v1_Chr1_+_3157501_3157501 6.53 AT1G09750.1
AT1G09750
Eukaryotic aspartyl protease family protein
arTal_v1_Chr1_+_27338034_27338062 6.32 AT1G72600.2
AT1G72600.1
AT1G72600
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr5_+_8863224_8863224 6.13 AT5G25460.1
DGR2
transmembrane protein, putative (Protein of unknown function, DUF642)
arTal_v1_Chr3_-_19139423_19139423 6.06 AT3G51600.1
LTP5
lipid transfer protein 5
arTal_v1_Chr4_-_7493080_7493080 5.63 AT4G12730.1
FLA2
FASCICLIN-like arabinogalactan 2
arTal_v1_Chr1_+_10371675_10371675 5.49 AT1G29660.1
AT1G29660
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr3_-_3357754_3357754 5.47 AT3G10720.2
AT3G10720
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr5_-_25343369_25343369 5.42 AT5G63180.1
AT5G63180
Pectin lyase-like superfamily protein
arTal_v1_Chr1_-_5447880_5447880 5.33 AT1G15820.1
LHCB6
light harvesting complex photosystem II subunit 6
arTal_v1_Chr3_-_23328789_23328789 5.23 AT3G63140.1
CSP41A
chloroplast stem-loop binding protein of 41 kDa
arTal_v1_Chr3_-_11013451_11013451 5.20 AT3G29030.1
EXPA5
expansin A5
arTal_v1_Chr2_-_9130212_9130240 5.15 AT2G21330.3
AT2G21330.2
FBA1
fructose-bisphosphate aldolase 1
arTal_v1_Chr1_-_4530222_4530222 5.14 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
arTal_v1_Chr3_+_6180621_6180621 5.13 AT3G18050.1
AT3G18050
GPI-anchored protein
arTal_v1_Chr2_-_17648945_17649062 5.13 AT2G42380.1
AT2G42380.4
AT2G42380.3
AT2G42380.2
AT2G42380.5
BZIP34
Basic-leucine zipper (bZIP) transcription factor family protein
arTal_v1_Chr4_+_6100714_6100714 5.12 AT4G09650.1
ATPD
F-type H+-transporting ATPase subunit delta
arTal_v1_Chr2_-_9130619_9130619 5.10 AT2G21330.1
FBA1
fructose-bisphosphate aldolase 1
arTal_v1_Chr3_-_4744263_4744263 5.08 AT3G14240.1
AT3G14240
Subtilase family protein
arTal_v1_Chr2_+_2199151_2199151 5.04 AT2G05790.1
AT2G05790
O-Glycosyl hydrolases family 17 protein
arTal_v1_Chr2_+_9844134_9844230 5.02 AT2G23130.1
AT2G23130.2
AGP17
arabinogalactan protein 17
arTal_v1_Chr5_+_426226_426226 4.90 AT5G02160.1
AT5G02160
transmembrane protein
arTal_v1_Chr1_+_898480_898480 4.89 AT1G03600.1
PSB27
photosystem II family protein
arTal_v1_Chr5_-_8916856_8916856 4.84 AT5G25610.1
RD22
BURP domain-containing protein
arTal_v1_Chr1_-_28419635_28419635 4.82 AT1G75680.1
GH9B7
glycosyl hydrolase 9B7
arTal_v1_Chr2_+_13647699_13647699 4.77 AT2G32100.1
OFP16
ovate family protein 16
arTal_v1_Chr5_-_25373904_25373904 4.73 AT5G63310.1
NDPK2
nucleoside diphosphate kinase 2
arTal_v1_Chr1_+_2249133_2249134 4.68 AT1G07320.2
AT1G07320.3
AT1G07320.4
RPL4
ribosomal protein L4
arTal_v1_Chr2_-_15137012_15137012 4.63 AT2G36050.1
OFP15
ovate family protein 15
arTal_v1_Chr3_+_21076505_21076505 4.59 AT3G56940.1
AT3G56940.2
CRD1
dicarboxylate diiron protein, putative (Crd1)
arTal_v1_Chr3_-_4008018_4008018 4.58 AT3G12610.1
DRT100
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr1_-_21614169_21614169 4.58 AT1G58270.1
ZW9
TRAF-like family protein
arTal_v1_Chr3_-_5469594_5469594 4.55 AT3G16140.1
PSAH-1
photosystem I subunit H-1
arTal_v1_Chr5_-_18371021_18371021 4.53 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
arTal_v1_Chr3_+_2717557_2717676 4.50 AT3G08940.2
AT3G08940.1
LHCB4.2
light harvesting complex photosystem II
arTal_v1_Chr3_-_21949796_21949796 4.50 AT3G59400.1
GUN4
protein GENOMES UNCOUPLED 4
arTal_v1_Chr3_+_3479673_3479673 4.50 AT3G11110.1
AT3G11110
RING/U-box superfamily protein
arTal_v1_Chr5_-_22560461_22560541 4.49 AT5G55730.2
AT5G55730.1
FLA1
FASCICLIN-like arabinogalactan 1
arTal_v1_Chr5_+_7222179_7222226 4.48 AT5G21430.1
AT5G21430.2
NdhU
Chaperone DnaJ-domain superfamily protein
arTal_v1_Chr3_+_2712236_2712236 4.42 AT3G08920.1
AT3G08920
Rhodanese/Cell cycle control phosphatase superfamily protein
arTal_v1_Chr3_+_19421397_19421397 4.40 AT3G52380.1
CP33
chloroplast RNA-binding protein 33
arTal_v1_Chr1_+_4899045_4899045 4.40 AT1G14345.1
AT1G14345
NAD(P)-linked oxidoreductase superfamily protein
arTal_v1_Chr1_+_2248967_2248967 4.39 AT1G07320.1
RPL4
ribosomal protein L4
arTal_v1_Chr1_+_3664187_3664187 4.38 AT1G10960.1
FD1
ferredoxin 1
arTal_v1_Chr3_-_3356811_3356811 4.38 AT3G10720.1
AT3G10720
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr2_+_18286321_18286321 4.36 AT2G44230.1
AT2G44230
hypothetical protein (DUF946)
arTal_v1_Chr3_+_17949416_17949416 4.36 AT3G48460.1
AT3G48460
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr3_+_23345754_23345754 4.35 AT3G63200.1
PLP9
PATATIN-like protein 9
arTal_v1_Chr4_+_12876822_12876948 4.31 AT4G25080.6
AT4G25080.5
AT4G25080.2
AT4G25080.1
AT4G25080.3
AT4G25080.4
CHLM
magnesium-protoporphyrin IX methyltransferase
arTal_v1_Chr2_+_8940833_8940833 4.31 AT2G20750.2
AT2G20750.1
EXPB1
expansin B1
arTal_v1_Chr3_-_8589754_8589754 4.29 AT3G23810.1
SAHH2
S-adenosyl-l-homocysteine (SAH) hydrolase 2
arTal_v1_Chr3_+_3698658_3698658 4.27 AT3G11700.1
FLA18
FASCICLIN-like arabinogalactan protein 18 precursor
arTal_v1_Chr4_-_17606924_17607050 4.26 AT4G37450.1
AT4G37450.2
AGP18
arabinogalactan protein 18
arTal_v1_Chr1_+_2047886_2047886 4.24 AT1G06680.2
PSBP-1
photosystem II subunit P-1
arTal_v1_Chr1_+_2047634_2047634 4.23 AT1G06680.1
PSBP-1
photosystem II subunit P-1
arTal_v1_Chr1_-_6319427_6319427 4.22 AT1G18360.1
AT1G18360
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr5_+_208866_208866 4.19 AT5G01530.1
LHCB4.1
light harvesting complex photosystem II
arTal_v1_Chr1_+_17918207_17918207 4.17 AT1G48480.1
RKL1
receptor-like kinase 1
arTal_v1_Chr5_+_2680401_2680401 4.15 AT5G08330.1
TCP11
TCP family transcription factor
arTal_v1_Chr3_+_22902491_22902638 4.14 AT3G61870.1
AT3G61870.2
AT3G61870
plant/protein
arTal_v1_Chr1_-_6999839_6999839 4.13 AT1G20190.1
EXPA11
expansin 11
arTal_v1_Chr3_-_2130451_2130451 4.10 AT3G06750.1
AT3G06750
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr5_-_7419335_7419335 4.10 AT5G22390.1
AT5G22390
FANTASTIC four-like protein (DUF3049)
arTal_v1_Chr5_-_20940895_20940895 4.09 AT5G51550.1
EXL3
EXORDIUM like 3
arTal_v1_Chr1_-_26515188_26515255 4.07 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
arTal_v1_Chr5_-_21068327_21068327 4.07 AT5G51820.1
PGM
phosphoglucomutase
arTal_v1_Chr2_-_15797059_15797059 4.06 AT2G37660.1
AT2G37660
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr1_+_1136078_1136078 4.05 AT1G04250.1
AXR3
AUX/IAA transcriptional regulator family protein
arTal_v1_Chr4_-_8307934_8307934 4.03 AT4G14440.1
HCD1
3-hydroxyacyl-CoA dehydratase 1
arTal_v1_Chr3_-_2334185_2334185 4.00 AT3G07320.1
AT3G07320
O-Glycosyl hydrolases family 17 protein
arTal_v1_Chr1_+_25374072_25374222 3.96 AT1G67700.1
AT1G67700.2
AT1G67700.5
AT1G67700.4
AT1G67700.3
AT1G67700
multidrug resistance protein
arTal_v1_Chr4_-_7591259_7591259 3.95 AT4G12980.1
AT4G12980
Auxin-responsive family protein
arTal_v1_Chr4_-_7545326_7545326 3.93 AT4G12880.2
ENODL19
early nodulin-like protein 19
arTal_v1_Chr2_-_12173951_12173991 3.93 AT2G28470.2
AT2G28470.4
AT2G28470.1
AT2G28470.3
BGAL8
beta-galactosidase 8
arTal_v1_Chr2_+_19191247_19191247 3.92 AT2G46710.1
ROPGAP3
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
arTal_v1_Chr3_+_22745514_22745514 3.92 AT3G61470.1
LHCA2
photosystem I light harvesting complex protein
arTal_v1_Chr2_+_14216771_14216771 3.92 AT2G33570.1
GALS1
glycosyltransferase family protein (DUF23)
arTal_v1_Chr1_+_29117500_29117542 3.92 AT1G77490.1
AT1G77490.2
TAPX
thylakoidal ascorbate peroxidase
arTal_v1_Chr1_-_4265156_4265156 3.91 AT1G12500.1
AT1G12500
Nucleotide-sugar transporter family protein
arTal_v1_Chr1_+_28428671_28428671 3.90 AT1G75710.1
AT1G75710
C2H2-like zinc finger protein
arTal_v1_Chr3_-_7796310_7796460 3.88 AT3G22120.1
AT3G22120.2
CWLP
cell wall-plasma membrane linker protein
arTal_v1_Chr4_-_13958107_13958107 3.88 AT4G28080.1
AT4G28080
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr3_+_11252807_11252807 3.88 AT3G29320.1
PHS1
Glycosyl transferase, family 35
arTal_v1_Chr4_-_9754161_9754161 3.87 AT4G17490.1
ERF6
ethylene responsive element binding factor 6
arTal_v1_Chr4_-_7545512_7545512 3.85 AT4G12880.1
ENODL19
early nodulin-like protein 19
arTal_v1_Chr4_+_14517393_14517393 3.83 AT4G29610.1
AT4G29610
Cytidine/deoxycytidylate deaminase family protein
arTal_v1_Chr5_-_2182538_2182538 3.79 AT5G07020.1
AT5G07020
proline-rich family protein
arTal_v1_Chr1_+_24229063_24229063 3.78 AT1G65230.1
AT1G65230
transmembrane protein, putative (DUF2358)
arTal_v1_Chr4_+_17986384_17986384 3.78 AT4G38430.1
ROPGEF1
rho guanyl-nucleotide exchange factor 1
arTal_v1_Chr2_-_7496292_7496292 3.77 AT2G17230.1
EXL5
EXORDIUM like 5
arTal_v1_Chr3_-_19595834_19595834 3.77 AT3G52870.1
AT3G52870
IQ calmodulin-binding motif family protein
arTal_v1_Chr1_-_6999523_6999523 3.76 AT1G20190.2
EXPA11
expansin 11
arTal_v1_Chr4_+_620691_620697 3.76 AT4G01460.1
AT4G01460.2
AT4G01460
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr4_+_9556783_9556783 3.76 AT4G16980.1
AT4G16980
arabinogalactan-protein family
arTal_v1_Chr2_-_15789605_15789605 3.76 AT2G37640.2
EXP3
Barwin-like endoglucanases superfamily protein
arTal_v1_Chr3_-_6855513_6855590 3.75 AT3G19720.3
AT3G19720.2
AT3G19720.1
ARC5
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr4_-_16806830_16806830 3.75 AT4G35320.1
AT4G35320
hypothetical protein
arTal_v1_Chr3_-_19467455_19467455 3.74 AT3G52500.1
AT3G52500
Eukaryotic aspartyl protease family protein
arTal_v1_Chr5_-_7026533_7026533 3.73 AT5G20740.1
AT5G20740
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr1_-_1768837_1768837 3.73 AT1G05850.2
AT1G05850.1
POM1
Chitinase family protein
arTal_v1_Chr5_+_26151333_26151422 3.72 AT5G65440.5
AT5G65440.4
AT5G65440.2
AT5G65440.1
AT5G65440.3
AT5G65440.7
AT5G65440.9
AT5G65440.8
AT5G65440.6
AT5G65440
transmembrane protein
arTal_v1_Chr3_+_20016837_20016892 3.70 AT3G54050.1
AT3G54050.2
HCEF1
high cyclic electron flow 1
arTal_v1_Chr4_+_9803624_9803624 3.70 AT4G17600.1
LIL3:1
Chlorophyll A-B binding family protein
arTal_v1_Chr3_+_18262290_18262511 3.69 AT3G49260.1
AT3G49260.3
AT3G49260.2
AT3G49260.4
iqd21
IQ-domain 21
arTal_v1_Chr1_+_4839801_4839853 3.69 AT1G14150.1
AT1G14150.2
PnsL2
PsbQ-like 2
arTal_v1_Chr4_+_16708552_16708552 3.68 AT4G35100.2
PIP3
plasma membrane intrinsic protein 3
arTal_v1_Chr2_-_15790139_15790139 3.68 AT2G37640.1
EXP3
Barwin-like endoglucanases superfamily protein
arTal_v1_Chr4_+_16708361_16708361 3.68 AT4G35100.1
PIP3
plasma membrane intrinsic protein 3
arTal_v1_Chr1_-_1169034_1169034 3.67 AT1G04360.1
AT1G04360
RING/U-box superfamily protein
arTal_v1_Chr4_+_9906821_9906840 3.66 AT4G17810.1
AT4G17810.2
AT4G17810
C2H2 and C2HC zinc fingers superfamily protein
arTal_v1_Chr5_+_733887_733887 3.66 AT5G03120.1
AT5G03120.2
AT5G03120
transmembrane protein
arTal_v1_Chr1_-_19101265_19101265 3.65 AT1G51500.1
ABCG12
ABC-2 type transporter family protein
arTal_v1_Chr1_-_26538437_26538437 3.65 AT1G70410.2
BCA4
beta carbonic anhydrase 4
arTal_v1_Chr4_+_160643_160643 3.65 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
arTal_v1_Chr4_-_1230164_1230164 3.65 AT4G02770.1
PSAD-1
photosystem I subunit D-1
arTal_v1_Chr5_+_1952505_1952505 3.64 AT5G06390.1
FLA17
FASCICLIN-like arabinogalactan protein 17 precursor
arTal_v1_Chr4_+_12220641_12220641 3.62 AT4G23400.1
PIP1%3B5
plasma membrane intrinsic protein 1;5
arTal_v1_Chr2_-_11173278_11173278 3.61 AT2G26250.1
KCS10
3-ketoacyl-CoA synthase 10
arTal_v1_Chr3_+_1225919_1225919 3.60 AT3G04550.1
AT3G04550
rubisco accumulation factor-like protein
arTal_v1_Chr5_+_7168106_7168106 3.58 AT5G21100.1
AT5G21100
Plant L-ascorbate oxidase
arTal_v1_Chr5_-_24990331_24990331 3.57 AT5G62220.1
GT18
glycosyltransferase 18
arTal_v1_Chr3_-_6436046_6436046 3.55 AT3G18710.1
PUB29
plant U-box 29
arTal_v1_Chr2_-_13020311_13020311 3.55 AT2G30570.1
PSBW
photosystem II reaction center W
arTal_v1_Chr3_+_7280792_7280792 3.53 AT3G20820.1
AT3G20820
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr5_-_14199431_14199431 3.53 AT5G36120.1
CCB3
cofactor assembly, complex C (B6F)
arTal_v1_Chr4_-_8454144_8454159 3.52 AT4G14740.4
AT4G14740.2
AT4G14740.1
AT4G14740
auxin canalization protein (DUF828)
arTal_v1_Chr1_-_26537422_26537426 3.52 AT1G70410.3
AT1G70410.1
BCA4
beta carbonic anhydrase 4
arTal_v1_Chr3_+_19639549_19639549 3.52 AT3G52960.1
AT3G52960
Thioredoxin superfamily protein
arTal_v1_Chr3_-_9723904_9723904 3.52 AT3G26520.1
TIP2
tonoplast intrinsic protein 2
arTal_v1_Chr1_-_754262_754262 3.51 AT1G03130.1
PSAD-2
photosystem I subunit D-2
arTal_v1_Chr1_+_25401514_25401514 3.50 AT1G67750.1
AT1G67750
Pectate lyase family protein
arTal_v1_Chr3_-_4775258_4775258 3.49 AT3G14310.1
PME3
pectin methylesterase 3
arTal_v1_Chr2_-_332781_332808 3.48 AT2G01755.1
AT2G01755.2
AT2G01755
hypothetical protein
arTal_v1_Chr3_-_8902835_8902835 3.46 AT3G24480.1
AT3G24480
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr2_-_183639_183764 3.46 AT2G01420.3
AT2G01420.1
AT2G01420.2
PIN4
Auxin efflux carrier family protein
arTal_v1_Chr1_+_23911024_23911024 3.46 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
arTal_v1_Chr5_+_6387341_6387489 3.43 AT5G19090.1
AT5G19090.4
AT5G19090.3
AT5G19090.2
AT5G19090
Heavy metal transport/detoxification superfamily protein
arTal_v1_Chr1_+_28458691_28458691 3.42 AT1G75800.1
AT1G75800
Pathogenesis-related thaumatin superfamily protein
arTal_v1_Chr1_+_10810877_10810877 3.40 AT1G30520.4
AT1G30520.3
AAE14
acyl-activating enzyme 14
arTal_v1_Chr1_+_9421009_9421069 3.40 AT1G27120.1
AT1G27120.2
AT1G27120
Galactosyltransferase family protein
arTal_v1_Chr5_-_20779464_20779488 3.39 AT5G51110.2
AT5G51110.1
AT5G51110
Transcriptional coactivator/pterin dehydratase
arTal_v1_Chr5_-_7026753_7026753 3.38 AT5G20740.2
AT5G20740
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr1_-_25649254_25649254 3.38 AT1G68400.1
AT1G68400
leucine-rich repeat transmembrane protein kinase family protein
arTal_v1_Chr5_-_740319_740319 3.38 AT5G03140.1
AT5G03140
Concanavalin A-like lectin protein kinase family protein
arTal_v1_Chr2_+_14849357_14849357 3.37 AT2G35260.1
AT2G35260
CAAX protease self-immunity protein
arTal_v1_Chr1_+_21028137_21028179 3.35 AT1G56190.1
AT1G56190.2
AT1G56190
Phosphoglycerate kinase family protein
arTal_v1_Chr1_-_18413016_18413016 3.35 AT1G49750.1
AT1G49750
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr2_+_1033598_1033598 3.34 AT2G03410.1
AT2G03410
Mo25 family protein
arTal_v1_Chr4_+_10231218_10231218 3.34 AT4G18570.2
AT4G18570.1
AT4G18570
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr1_-_464981_464981 3.33 AT1G02335.1
GL22
germin-like protein subfamily 2 member 2 precursor
arTal_v1_Chr2_+_11856571_11856571 3.33 AT2G27820.1
PD1
prephenate dehydratase 1
arTal_v1_Chr4_-_17355891_17356037 3.32 AT4G36850.3
AT4G36850.4
AT4G36850.2
AT4G36850.1
AT4G36850
PQ-loop repeat family protein / transmembrane family protein
arTal_v1_Chr1_-_18690503_18690503 3.31 AT1G50450.1
AT1G50450
Saccharopine dehydrogenase
arTal_v1_Chr3_+_10318455_10318505 3.30 AT3G27830.1
AT3G27830.2
RPL12-A
ribosomal protein L12-A
arTal_v1_Chr5_-_26845294_26845294 3.29 AT5G67280.1
RLK
receptor-like kinase
arTal_v1_Chr5_+_25016860_25016860 3.29 AT5G62280.1
AT5G62280
DUF1442 family protein (DUF1442)
arTal_v1_Chr1_+_10810397_10810397 3.25 AT1G30520.1
AT1G30520.2
AAE14
acyl-activating enzyme 14
arTal_v1_Chr5_+_15421573_15421573 3.25 AT5G38520.2
AT5G38520
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr4_+_9739518_9739518 3.25 AT4G17460.1
HAT1
Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein
arTal_v1_Chr3_+_20984635_20984635 3.24 AT3G56650.1
PPD6
thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)
arTal_v1_Chr3_-_20576249_20576249 3.24 AT3G55500.1
EXPA16
expansin A16
arTal_v1_Chr2_+_14733975_14733975 3.24 AT2G34925.1
CLE42
CLAVATA3/ESR-RELATED 42
arTal_v1_Chr5_+_26261136_26261136 3.23 AT5G65683.1
WAVH2
Zinc finger (C3HC4-type RING finger) family protein
arTal_v1_Chr2_+_12874465_12874465 3.22 AT2G30150.2
AT2G30150
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr5_+_15421289_15421289 3.22 AT5G38520.1
AT5G38520
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr5_-_3728726_3728726 3.20 AT5G11590.1
TINY2
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr3_+_22373013_22373013 3.20 AT3G60530.1
GATA4
GATA transcription factor 4
arTal_v1_Chr5_+_18697235_18697250 3.20 AT5G46110.2
AT5G46110.1
AT5G46110.3
AT5G46110.4
APE2
Glucose-6-phosphate/phosphate translocator-like protein
arTal_v1_Chr3_+_16569051_16569051 3.19 AT3G45230.1
AT3G45230
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr4_-_11785937_11785937 3.19 AT4G22290.1
AT4G22290
Ubiquitin-specific protease family C19-related protein
arTal_v1_Chr2_-_18630428_18630428 3.18 AT2G45190.2
AFO
Plant-specific transcription factor YABBY family protein
arTal_v1_Chr3_-_18834834_18834834 3.17 AT3G50685.1
AT3G50685
anti-muellerian hormone type-2 receptor
arTal_v1_Chr2_-_5051613_5051613 3.15 AT2G12462.1
AT2G12462
sterile alpha motif (SAM) domain protein
arTal_v1_Chr1_-_28581315_28581315 3.15 AT1G76160.1
sks5
SKU5 similar 5
arTal_v1_Chr4_-_15429113_15429225 3.15 AT4G31890.2
AT4G31890.1
AT4G31890.3
AT4G31890
ARM repeat superfamily protein
arTal_v1_Chr3_-_1855063_1855197 3.15 AT3G06130.2
AT3G06130.1
AT3G06130
Heavy metal transport/detoxification superfamily protein
arTal_v1_Chr3_-_20257916_20257916 3.14 AT3G54720.1
AMP1
Peptidase M28 family protein
arTal_v1_Chr2_+_12874706_12874706 3.14 AT2G30150.1
AT2G30150
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr4_-_947075_947085 3.13 AT4G02130.2
AT4G02130.3
GATL6
galacturonosyltransferase 6
arTal_v1_Chr5_+_7394443_7394473 3.12 AT5G22340.1
AT5G22340.2
AT5G22340
NF-kappa-B inhibitor-like protein
arTal_v1_Chr2_-_18630779_18630779 3.12 AT2G45190.1
AFO
Plant-specific transcription factor YABBY family protein
arTal_v1_Chr5_-_5310951_5310951 3.11 AT5G16250.1
AT5G16250
transmembrane protein
arTal_v1_Chr3_-_22881775_22881775 3.11 AT3G61820.1
AT3G61820
Eukaryotic aspartyl protease family protein
arTal_v1_Chr1_-_11872926_11872926 3.11 AT1G32780.1
AT1G32780
GroES-like zinc-binding dehydrogenase family protein
arTal_v1_Chr5_+_23559474_23559474 3.10 AT5G58250.1
EMB3143
YCF54
arTal_v1_Chr1_+_310169_310169 3.09 AT1G01900.1
SBTI1.1
subtilase family protein
arTal_v1_Chr3_-_22295529_22295529 3.09 AT3G60320.1
AT3G60320
bZIP domain class transcription factor (DUF630 and DUF632)
arTal_v1_Chr2_+_19469571_19469612 3.09 AT2G47440.2
AT2G47440.1
AT2G47440
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr1_+_116784_116784 3.08 AT1G01300.1
AT1G01300
Eukaryotic aspartyl protease family protein
arTal_v1_Chr3_-_9255083_9255083 3.07 AT3G25500.1
AFH1
formin homology 1
arTal_v1_Chr1_-_12054753_12054753 3.06 AT1G33240.1
AT1G33240.3
GTL1
GT-2-like 1
arTal_v1_Chr1_-_12053935_12053935 3.06 AT1G33240.2
GTL1
GT-2-like 1
arTal_v1_Chr5_-_16061043_16061043 3.05 AT5G40150.1
AT5G40150
Peroxidase superfamily protein
arTal_v1_Chr1_-_19565270_19565272 3.04 AT1G52510.2
AT1G52510.1
AT1G52510
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr4_+_14566183_14566265 3.04 AT4G29740.3
AT4G29740.2
AT4G29740.1
CKX4
cytokinin oxidase 4

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G25190

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
2.4 7.2 GO:0015840 urea transport(GO:0015840)
2.0 5.9 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
1.7 5.2 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
1.7 8.3 GO:0042549 photosystem II stabilization(GO:0042549)
1.5 27.7 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
1.4 4.3 GO:0042407 cristae formation(GO:0042407)
1.4 8.5 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
1.4 5.5 GO:0080094 response to trehalose-6-phosphate(GO:0080094)
1.3 6.3 GO:0010450 inflorescence meristem growth(GO:0010450)
1.2 3.7 GO:0050687 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
1.1 20.4 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
1.1 4.4 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
1.0 6.0 GO:0051098 regulation of binding(GO:0051098)
1.0 18.5 GO:0006949 syncytium formation(GO:0006949)
0.9 3.7 GO:0033306 phytol metabolic process(GO:0033306)
0.9 5.5 GO:0009650 UV protection(GO:0009650)
0.9 8.8 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.9 2.6 GO:0010198 synergid death(GO:0010198)
0.8 0.8 GO:0010253 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.8 5.9 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.8 4.2 GO:0005980 glycogen catabolic process(GO:0005980)
0.8 2.5 GO:0035436 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.8 4.1 GO:0009590 detection of gravity(GO:0009590)
0.8 3.2 GO:0048656 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.8 4.7 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.8 3.9 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.7 5.2 GO:1904278 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.7 2.9 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.7 4.2 GO:1904961 quiescent center organization(GO:1904961)
0.7 2.0 GO:0080051 cutin transport(GO:0080051)
0.7 1.4 GO:0009915 phloem sucrose loading(GO:0009915)
0.7 3.4 GO:0010422 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.7 8.7 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.7 2.0 GO:0090143 nucleoid organization(GO:0090143)
0.7 2.6 GO:0006065 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.6 17.3 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.6 7.7 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.6 1.8 GO:0006557 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.6 1.8 GO:0009660 amyloplast organization(GO:0009660)
0.6 0.6 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.6 2.9 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.6 2.3 GO:0006426 glycyl-tRNA aminoacylation(GO:0006426)
0.6 4.0 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.6 3.4 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.6 2.8 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.5 2.2 GO:0070206 protein trimerization(GO:0070206)
0.5 4.9 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.5 2.7 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.5 8.6 GO:0010315 auxin efflux(GO:0010315)
0.5 1.1 GO:0040019 positive regulation of embryonic development(GO:0040019)
0.5 3.2 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.5 14.2 GO:0009913 epidermis development(GO:0008544) epidermal cell differentiation(GO:0009913) epithelial cell differentiation(GO:0030855)
0.5 7.8 GO:0009098 leucine biosynthetic process(GO:0009098)
0.5 5.2 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.5 3.0 GO:0015855 pyrimidine nucleobase transport(GO:0015855) uracil transport(GO:0015857)
0.5 9.6 GO:0009959 negative gravitropism(GO:0009959)
0.5 13.0 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.5 10.0 GO:0010207 photosystem II assembly(GO:0010207)
0.5 4.0 GO:0031222 arabinan catabolic process(GO:0031222)
0.5 1.5 GO:1902975 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.5 6.3 GO:0032544 plastid translation(GO:0032544)
0.5 1.5 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.5 7.1 GO:0006022 aminoglycan metabolic process(GO:0006022)
0.5 0.9 GO:0046104 deoxyribonucleoside metabolic process(GO:0009120) thymidine metabolic process(GO:0046104) pyrimidine deoxyribonucleoside metabolic process(GO:0046125)
0.5 1.4 GO:0046085 adenosine metabolic process(GO:0046085)
0.5 4.2 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.4 9.4 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.4 3.5 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.4 2.2 GO:0010067 procambium histogenesis(GO:0010067)
0.4 5.2 GO:0042374 phylloquinone biosynthetic process(GO:0042372) phylloquinone metabolic process(GO:0042374)
0.4 2.2 GO:0006307 DNA dealkylation involved in DNA repair(GO:0006307)
0.4 37.6 GO:0045490 pectin catabolic process(GO:0045490)
0.4 2.6 GO:0019985 leading strand elongation(GO:0006272) translesion synthesis(GO:0019985)
0.4 1.7 GO:0099636 cytoplasmic streaming(GO:0099636)
0.4 1.2 GO:0009143 nucleoside triphosphate catabolic process(GO:0009143)
0.4 18.5 GO:0045489 pectin biosynthetic process(GO:0045489)
0.4 7.7 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.4 2.0 GO:0010361 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.4 2.0 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.4 1.9 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.4 0.8 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.4 1.5 GO:0010376 stomatal complex formation(GO:0010376)
0.4 1.1 GO:0042817 pyridoxal metabolic process(GO:0042817)
0.4 4.1 GO:0010233 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.4 1.5 GO:0051316 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation(GO:0051316) attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation(GO:0051455) microtubule cytoskeleton organization involved in homologous chromosome segregation(GO:0090172)
0.4 3.0 GO:0070592 xylan biosynthetic process(GO:0045492) cell wall polysaccharide biosynthetic process(GO:0070592)
0.4 7.2 GO:0031425 chloroplast RNA processing(GO:0031425)
0.4 1.4 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.4 2.1 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.3 1.7 GO:0019419 sulfate reduction(GO:0019419)
0.3 1.0 GO:0071422 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.3 1.0 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.3 1.0 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.3 0.7 GO:0042659 regulation of cell fate specification(GO:0042659)
0.3 2.0 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.3 4.7 GO:0010274 hydrotropism(GO:0010274)
0.3 3.3 GO:0009554 megasporogenesis(GO:0009554)
0.3 1.0 GO:0060429 epithelium development(GO:0060429)
0.3 1.9 GO:0010731 protein glutathionylation(GO:0010731)
0.3 2.2 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.3 0.9 GO:0010541 acropetal auxin transport(GO:0010541)
0.3 1.2 GO:0090207 regulation of triglyceride metabolic process(GO:0090207)
0.3 1.5 GO:0015939 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.3 1.5 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.3 1.1 GO:0090057 root radial pattern formation(GO:0090057)
0.3 2.0 GO:0080117 secondary growth(GO:0080117)
0.3 0.3 GO:0035264 multicellular organism growth(GO:0035264)
0.3 1.4 GO:0006549 isoleucine metabolic process(GO:0006549) isoleucine biosynthetic process(GO:0009097)
0.3 6.4 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.3 3.0 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.3 1.1 GO:0048462 carpel formation(GO:0048462)
0.3 0.5 GO:0046683 response to organophosphorus(GO:0046683)
0.3 1.3 GO:0090059 protoxylem development(GO:0090059)
0.3 4.8 GO:1901401 regulation of tetrapyrrole metabolic process(GO:1901401)
0.3 0.5 GO:0008295 spermidine biosynthetic process(GO:0008295)
0.3 2.1 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.3 1.0 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.3 2.6 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.3 3.9 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.3 1.8 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.3 2.8 GO:0042344 indole glucosinolate catabolic process(GO:0042344)
0.2 0.7 GO:0019593 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.2 1.5 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.2 8.6 GO:0042335 cuticle development(GO:0042335)
0.2 1.0 GO:0001887 selenium compound metabolic process(GO:0001887)
0.2 1.0 GO:0031110 regulation of microtubule polymerization or depolymerization(GO:0031110)
0.2 4.3 GO:0009641 shade avoidance(GO:0009641)
0.2 2.1 GO:0006771 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.2 2.8 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.2 1.6 GO:0009827 plant-type cell wall modification(GO:0009827)
0.2 1.1 GO:0006968 cellular defense response(GO:0006968)
0.2 1.6 GO:0006021 inositol biosynthetic process(GO:0006021)
0.2 0.7 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.2 0.7 GO:1901031 regulation of response to reactive oxygen species(GO:1901031)
0.2 4.4 GO:0042044 water transport(GO:0006833) fluid transport(GO:0042044)
0.2 2.4 GO:0070828 heterochromatin organization(GO:0070828)
0.2 1.1 GO:0033386 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.2 2.2 GO:0010439 regulation of glucosinolate biosynthetic process(GO:0010439)
0.2 3.7 GO:0010025 wax biosynthetic process(GO:0010025)
0.2 1.3 GO:0046345 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.2 1.5 GO:0009954 proximal/distal pattern formation(GO:0009954)
0.2 3.5 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.2 2.9 GO:0045493 xylan catabolic process(GO:0045493)
0.2 1.6 GO:0006526 arginine biosynthetic process(GO:0006526)
0.2 3.0 GO:0006547 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.2 0.8 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.2 4.0 GO:0010143 cutin biosynthetic process(GO:0010143)
0.2 0.6 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.2 1.0 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.2 0.6 GO:0009647 skotomorphogenesis(GO:0009647)
0.2 5.5 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.2 7.9 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.2 6.9 GO:0048825 cotyledon development(GO:0048825)
0.2 12.8 GO:0019684 photosynthesis, light reaction(GO:0019684)
0.2 3.6 GO:0005983 starch catabolic process(GO:0005983)
0.2 3.2 GO:0010109 regulation of photosynthesis(GO:0010109)
0.2 0.6 GO:0034626 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.2 3.6 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.2 1.5 GO:0043486 histone exchange(GO:0043486)
0.2 1.3 GO:0006880 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.2 3.7 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.2 8.9 GO:0016485 protein processing(GO:0016485)
0.2 0.2 GO:0072702 response to methyl methanesulfonate(GO:0072702)
0.2 4.5 GO:0010252 auxin homeostasis(GO:0010252)
0.2 5.8 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.2 1.0 GO:0046717 acid secretion(GO:0046717)
0.2 0.5 GO:0071452 cellular response to singlet oxygen(GO:0071452)
0.2 3.3 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.2 2.1 GO:0043255 regulation of carbohydrate biosynthetic process(GO:0043255)
0.2 0.5 GO:0097298 regulation of nucleus size(GO:0097298)
0.2 0.7 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.2 2.4 GO:0000373 Group II intron splicing(GO:0000373)
0.2 1.5 GO:0000963 mitochondrial RNA processing(GO:0000963)
0.2 2.7 GO:1901068 guanosine-containing compound metabolic process(GO:1901068)
0.2 0.6 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.2 2.9 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.2 1.7 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.2 7.1 GO:0015979 photosynthesis(GO:0015979)
0.2 0.9 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.2 3.2 GO:0019852 L-ascorbic acid metabolic process(GO:0019852)
0.2 1.7 GO:0015996 chlorophyll catabolic process(GO:0015996)
0.1 0.7 GO:0032012 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.1 0.3 GO:0048445 carpel morphogenesis(GO:0048445)
0.1 3.7 GO:0006284 base-excision repair(GO:0006284)
0.1 8.0 GO:0009630 gravitropism(GO:0009630)
0.1 1.0 GO:0009082 branched-chain amino acid biosynthetic process(GO:0009082)
0.1 1.3 GO:0071491 red light signaling pathway(GO:0010161) cellular response to red light(GO:0071491)
0.1 2.7 GO:0009269 response to desiccation(GO:0009269)
0.1 1.7 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.1 4.0 GO:0030148 sphingolipid biosynthetic process(GO:0030148)
0.1 13.5 GO:0080167 response to karrikin(GO:0080167)
0.1 1.4 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.1 3.4 GO:0045926 negative regulation of growth(GO:0045926)
0.1 1.2 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.1 3.8 GO:0010582 floral meristem determinacy(GO:0010582)
0.1 7.6 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.1 0.4 GO:0018196 peptidyl-asparagine modification(GO:0018196) protein N-linked glycosylation via asparagine(GO:0018279)
0.1 1.7 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.1 0.9 GO:0010358 leaf shaping(GO:0010358)
0.1 0.4 GO:0034389 lipid particle organization(GO:0034389)
0.1 0.5 GO:0006768 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.1 1.3 GO:0051446 positive regulation of meiotic cell cycle(GO:0051446)
0.1 4.8 GO:0009664 plant-type cell wall organization(GO:0009664)
0.1 0.3 GO:0032886 regulation of microtubule-based process(GO:0032886)
0.1 1.0 GO:0010199 formation of organ boundary(GO:0010160) organ boundary specification between lateral organs and the meristem(GO:0010199) formation of anatomical boundary(GO:0048859)
0.1 1.7 GO:0016556 mRNA modification(GO:0016556)
0.1 3.7 GO:0051225 spindle assembly(GO:0051225)
0.1 2.2 GO:0006817 phosphate ion transport(GO:0006817)
0.1 1.1 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.1 1.9 GO:0000959 mitochondrial RNA metabolic process(GO:0000959)
0.1 0.9 GO:0052544 defense response by callose deposition in cell wall(GO:0052544)
0.1 2.6 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.1 0.7 GO:0016926 protein desumoylation(GO:0016926)
0.1 1.8 GO:0015985 ATP biosynthetic process(GO:0006754) energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986)
0.1 2.0 GO:0008356 asymmetric cell division(GO:0008356)
0.1 0.4 GO:0048830 adventitious root development(GO:0048830)
0.1 0.4 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.1 1.5 GO:0006743 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.1 0.5 GO:0009819 drought recovery(GO:0009819)
0.1 2.8 GO:0006289 nucleotide-excision repair(GO:0006289)
0.1 1.3 GO:0050821 protein stabilization(GO:0050821)
0.1 1.6 GO:0006282 regulation of DNA repair(GO:0006282)
0.1 0.4 GO:0007265 Ras protein signal transduction(GO:0007265) Rho protein signal transduction(GO:0007266)
0.1 1.1 GO:0046855 phosphorylated carbohydrate dephosphorylation(GO:0046838) inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.1 5.2 GO:0009875 pollen-pistil interaction(GO:0009875)
0.1 0.2 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.1 2.2 GO:0010218 response to far red light(GO:0010218)
0.1 0.9 GO:0042793 transcription from plastid promoter(GO:0042793)
0.1 0.6 GO:0048658 anther wall tapetum development(GO:0048658)
0.1 0.4 GO:0071323 cellular response to chitin(GO:0071323)
0.1 1.5 GO:0010051 xylem and phloem pattern formation(GO:0010051)
0.1 1.1 GO:0009556 microsporogenesis(GO:0009556)
0.1 0.5 GO:0009920 cell plate formation involved in plant-type cell wall biogenesis(GO:0009920)
0.1 2.0 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.1 0.9 GO:0036297 interstrand cross-link repair(GO:0036297)
0.1 1.0 GO:0010821 regulation of mitochondrion organization(GO:0010821)
0.1 0.5 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.1 1.5 GO:0010584 pollen exine formation(GO:0010584)
0.1 0.9 GO:0006265 DNA topological change(GO:0006265)
0.1 0.2 GO:0055047 generative cell mitosis(GO:0055047)
0.1 2.5 GO:0051085 'de novo' posttranslational protein folding(GO:0051084) chaperone mediated protein folding requiring cofactor(GO:0051085)
0.1 0.6 GO:0052548 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.1 0.3 GO:0046500 S-adenosylmethionine metabolic process(GO:0046500)
0.1 4.0 GO:0045454 cell redox homeostasis(GO:0045454)
0.1 3.1 GO:0016125 sterol metabolic process(GO:0016125)
0.1 1.3 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.1 0.2 GO:0008333 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
0.1 2.0 GO:0030865 cortical cytoskeleton organization(GO:0030865)
0.1 1.8 GO:0009226 nucleotide-sugar biosynthetic process(GO:0009226)
0.1 0.4 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.1 0.9 GO:0046856 phosphatidylinositol dephosphorylation(GO:0046856)
0.1 2.6 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.0 0.7 GO:0006298 mismatch repair(GO:0006298)
0.0 0.2 GO:0002164 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.0 0.4 GO:0006825 copper ion transport(GO:0006825)
0.0 0.1 GO:0042732 D-xylose metabolic process(GO:0042732)
0.0 0.5 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.0 0.5 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.0 0.1 GO:0043132 NAD transport(GO:0043132)
0.0 0.3 GO:0042138 meiotic DNA double-strand break formation(GO:0042138)
0.0 0.8 GO:0009825 multidimensional cell growth(GO:0009825)
0.0 3.1 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.0 1.1 GO:0006891 intra-Golgi vesicle-mediated transport(GO:0006891)
0.0 2.3 GO:0048545 brassinosteroid mediated signaling pathway(GO:0009742) steroid hormone mediated signaling pathway(GO:0043401) response to steroid hormone(GO:0048545) cellular response to brassinosteroid stimulus(GO:0071367) cellular response to steroid hormone stimulus(GO:0071383)
0.0 1.1 GO:0006505 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 1.0 GO:0010212 response to ionizing radiation(GO:0010212)
0.0 0.7 GO:0034394 protein localization to cell surface(GO:0034394) regulation of protein localization to cell surface(GO:2000008)
0.0 0.2 GO:0071731 response to nitric oxide(GO:0071731)
0.0 0.6 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 0.3 GO:0017182 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.6 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.0 0.5 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.0 0.4 GO:0015772 oligosaccharide transport(GO:0015772)
0.0 0.7 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.0 1.0 GO:0009734 auxin-activated signaling pathway(GO:0009734)
0.0 0.9 GO:0009846 pollen germination(GO:0009846)
0.0 1.2 GO:0006414 translational elongation(GO:0006414)
0.0 0.2 GO:0010230 alternative respiration(GO:0010230)
0.0 0.5 GO:0048768 root hair cell tip growth(GO:0048768)
0.0 0.1 GO:1901001 negative regulation of response to salt stress(GO:1901001)
0.0 0.3 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.6 GO:0019750 chloroplast relocation(GO:0009902) chloroplast localization(GO:0019750) plastid localization(GO:0051644) establishment of plastid localization(GO:0051667)
0.0 0.3 GO:0061157 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 0.2 GO:2000142 regulation of DNA-templated transcription, initiation(GO:2000142)
0.0 1.3 GO:0008033 tRNA processing(GO:0008033)
0.0 0.4 GO:0019915 lipid storage(GO:0019915)
0.0 0.4 GO:0016575 histone deacetylation(GO:0016575)
0.0 0.2 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.0 0.5 GO:0042255 ribosome assembly(GO:0042255)
0.0 0.0 GO:0015784 GDP-mannose transport(GO:0015784) purine nucleotide-sugar transmembrane transport(GO:0090480) GDP-mannose transmembrane transport(GO:1990570)
0.0 0.3 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.8 14.4 GO:0009538 photosystem I reaction center(GO:0009538)
1.8 12.4 GO:0000311 plastid large ribosomal subunit(GO:0000311)
1.2 3.5 GO:0043674 pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
1.0 4.9 GO:0009897 external side of plasma membrane(GO:0009897)
0.9 23.1 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.8 52.7 GO:0010287 plastoglobule(GO:0010287)
0.7 2.2 GO:0031021 interphase microtubule organizing center(GO:0031021)
0.7 3.6 GO:0043036 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.7 2.8 GO:0070505 pollen coat(GO:0070505)
0.7 3.9 GO:0009522 photosystem I(GO:0009522)
0.6 1.8 GO:0009501 amyloplast(GO:0009501)
0.6 1.7 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.5 1.5 GO:0005775 vacuolar lumen(GO:0005775)
0.4 2.2 GO:0005960 glycine cleavage complex(GO:0005960)
0.4 2.9 GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)(GO:0045263)
0.4 1.6 GO:0031356 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.4 1.1 GO:0031897 Tic complex(GO:0031897)
0.3 4.9 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.3 10.0 GO:0009543 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.3 50.2 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.3 11.4 GO:0010319 stromule(GO:0010319)
0.3 0.9 GO:0005652 nuclear lamina(GO:0005652)
0.3 58.8 GO:0009505 plant-type cell wall(GO:0009505)
0.3 1.5 GO:0000812 Swr1 complex(GO:0000812)
0.3 2.6 GO:0005662 DNA replication factor A complex(GO:0005662)
0.3 4.5 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.3 3.3 GO:0009986 cell surface(GO:0009986)
0.3 91.5 GO:0009579 thylakoid(GO:0009579)
0.3 0.8 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.2 1.5 GO:0000796 condensin complex(GO:0000796)
0.2 2.1 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.2 3.2 GO:0005880 nuclear microtubule(GO:0005880)
0.2 1.6 GO:0005884 actin filament(GO:0005884)
0.2 2.0 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.2 3.1 GO:0000229 cytoplasmic chromosome(GO:0000229) plastid chromosome(GO:0009508)
0.2 5.0 GO:0016324 apical plasma membrane(GO:0016324)
0.2 1.5 GO:0034990 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.2 2.1 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.2 0.6 GO:0010369 chromocenter(GO:0010369)
0.2 54.9 GO:0030312 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.2 3.8 GO:0031307 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.1 1.5 GO:0042555 MCM complex(GO:0042555)
0.1 1.7 GO:0042644 chloroplast nucleoid(GO:0042644)
0.1 2.3 GO:0055028 cortical microtubule(GO:0055028)
0.1 2.0 GO:0000792 heterochromatin(GO:0000792)
0.1 4.1 GO:0009528 plastid inner membrane(GO:0009528)
0.1 41.9 GO:0009570 chloroplast stroma(GO:0009570)
0.1 0.8 GO:0032300 mismatch repair complex(GO:0032300)
0.1 1.1 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.1 1.6 GO:0000784 nuclear chromosome, telomeric region(GO:0000784)
0.1 0.4 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.1 3.4 GO:0009707 chloroplast outer membrane(GO:0009707)
0.1 0.5 GO:0070652 HAUS complex(GO:0070652)
0.1 5.7 GO:0000138 Golgi trans cisterna(GO:0000138)
0.1 1.4 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.1 3.0 GO:0099503 secretory vesicle(GO:0099503)
0.1 0.5 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.1 6.2 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.1 2.7 GO:0005797 Golgi medial cisterna(GO:0005797)
0.1 3.4 GO:0099512 supramolecular fiber(GO:0099512) polymeric cytoskeletal fiber(GO:0099513)
0.1 7.5 GO:0048046 apoplast(GO:0048046)
0.0 107.9 GO:0005576 extracellular region(GO:0005576)
0.0 1.1 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 0.2 GO:0030906 retromer, cargo-selective complex(GO:0030906)
0.0 0.2 GO:0001673 male germ cell nucleus(GO:0001673)
0.0 0.7 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 0.3 GO:0016471 vacuolar proton-transporting V-type ATPase complex(GO:0016471)
0.0 5.8 GO:0009941 chloroplast envelope(GO:0009941)
0.0 0.5 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.0 0.8 GO:0015934 large ribosomal subunit(GO:0015934)
0.0 0.3 GO:0031965 nuclear membrane(GO:0031965)
0.0 0.1 GO:0005687 U4 snRNP(GO:0005687)
0.0 0.1 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.0 2.2 GO:0005802 trans-Golgi network(GO:0005802)
0.0 0.1 GO:0005845 mRNA cap binding complex(GO:0005845)
0.0 0.9 GO:0016607 nuclear speck(GO:0016607)
0.0 0.1 GO:0010168 ER body(GO:0010168)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.4 7.2 GO:0015204 urea transmembrane transporter activity(GO:0015204)
2.0 5.9 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
1.7 24.1 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
1.7 6.8 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
1.6 4.7 GO:0016418 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
1.5 4.4 GO:0016802 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
1.4 4.3 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
1.2 4.9 GO:0016420 malonyltransferase activity(GO:0016420)
1.1 3.4 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
1.1 28.9 GO:0016168 chlorophyll binding(GO:0016168)
1.1 5.5 GO:0004001 adenosine kinase activity(GO:0004001)
1.1 3.2 GO:0008311 phosphodiesterase I activity(GO:0004528) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311)
1.0 5.2 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
1.0 4.2 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
1.0 1.0 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.9 3.7 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.9 2.7 GO:0010242 oxygen evolving activity(GO:0010242)
0.9 2.6 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.9 25.6 GO:0008266 poly(U) RNA binding(GO:0008266)
0.8 4.1 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.8 3.2 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.8 3.8 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.7 3.7 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.7 2.2 GO:0016642 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.7 3.5 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.7 2.1 GO:0035671 enone reductase activity(GO:0035671)
0.7 8.8 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.6 1.9 GO:0045174 oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor(GO:0016672) glutathione dehydrogenase (ascorbate) activity(GO:0045174)
0.6 1.8 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.6 1.8 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.6 11.4 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.6 2.3 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.6 3.4 GO:0016841 ammonia-lyase activity(GO:0016841)
0.6 5.1 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.5 2.7 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.5 2.7 GO:0004126 cytidine deaminase activity(GO:0004126)
0.5 1.6 GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity(GO:0004042)
0.5 15.4 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.5 2.7 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.5 4.8 GO:0009922 fatty acid elongase activity(GO:0009922)
0.5 2.1 GO:0003862 3-isopropylmalate dehydrogenase activity(GO:0003862)
0.5 13.2 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.5 2.6 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.5 1.6 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.5 4.1 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.5 10.3 GO:0005199 structural constituent of cell wall(GO:0005199)
0.5 2.0 GO:0015245 fatty acid transporter activity(GO:0015245)
0.5 1.5 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.5 12.6 GO:0004565 beta-galactosidase activity(GO:0004565)
0.5 1.4 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.5 3.3 GO:0003885 D-arabinono-1,4-lactone oxidase activity(GO:0003885)
0.5 3.7 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.5 3.7 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.5 1.8 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.4 2.7 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.4 12.1 GO:0008810 cellulase activity(GO:0008810)
0.4 3.5 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.4 3.9 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.4 3.3 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.4 1.2 GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity(GO:0003864)
0.4 2.1 GO:0010313 phytochrome binding(GO:0010313)
0.4 1.6 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.4 7.2 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.4 1.6 GO:0004817 cysteine-tRNA ligase activity(GO:0004817)
0.4 5.1 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.4 1.6 GO:0008934 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.4 1.2 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.4 3.8 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.4 3.0 GO:0005350 pyrimidine nucleobase transmembrane transporter activity(GO:0005350) uracil transmembrane transporter activity(GO:0015210)
0.4 1.4 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.3 3.8 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.3 1.0 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.3 1.0 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.3 2.0 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.3 2.3 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.3 1.3 GO:0016882 cyclo-ligase activity(GO:0016882)
0.3 2.9 GO:0043495 protein anchor(GO:0043495)
0.3 0.9 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.3 2.8 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.3 0.9 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.3 1.2 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.3 4.0 GO:0046556 alpha-L-arabinofuranosidase activity(GO:0046556)
0.3 2.9 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.3 1.1 GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.3 2.8 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.3 10.6 GO:0045735 nutrient reservoir activity(GO:0045735)
0.3 1.3 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.3 3.1 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.2 1.5 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.2 1.0 GO:0080161 auxin transmembrane transporter activity(GO:0080161)
0.2 1.2 GO:0004049 anthranilate synthase activity(GO:0004049)
0.2 1.5 GO:0031177 phosphopantetheine binding(GO:0031177)
0.2 3.1 GO:0070567 cytidylyltransferase activity(GO:0070567)
0.2 1.2 GO:0034511 U3 snoRNA binding(GO:0034511)
0.2 15.3 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.2 3.0 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.2 7.2 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.2 7.4 GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor(GO:0016682)
0.2 2.0 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.2 1.1 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.2 0.9 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.2 2.3 GO:0008725 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.2 1.7 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.2 2.3 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.2 1.4 GO:0016774 phosphotransferase activity, carboxyl group as acceptor(GO:0016774)
0.2 7.8 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.2 1.0 GO:0070704 sterol desaturase activity(GO:0070704)
0.2 1.6 GO:0008026 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.2 0.8 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.2 3.8 GO:0034595 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity(GO:0004439) phosphatidylinositol phosphate 5-phosphatase activity(GO:0034595)
0.2 3.6 GO:0008138 protein tyrosine/serine/threonine phosphatase activity(GO:0008138)
0.2 3.6 GO:0102337 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.2 1.0 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.2 1.1 GO:0008441 3'(2'),5'-bisphosphate nucleotidase activity(GO:0008441)
0.2 2.3 GO:0008061 chitin binding(GO:0008061)
0.2 3.8 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.2 1.7 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.2 0.9 GO:0001671 ATPase activator activity(GO:0001671)
0.2 20.2 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.2 1.8 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.2 1.6 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.2 0.7 GO:0070140 ubiquitin-like protein-specific isopeptidase activity(GO:0070138) SUMO-specific isopeptidase activity(GO:0070140)
0.2 2.1 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.2 17.1 GO:0009055 electron carrier activity(GO:0009055)
0.2 2.3 GO:0016872 intramolecular lyase activity(GO:0016872)
0.2 6.8 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.2 0.2 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.2 1.6 GO:0009378 four-way junction helicase activity(GO:0009378)
0.2 0.6 GO:0045181 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.2 2.6 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.2 1.7 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.2 0.6 GO:0033188 sphingomyelin synthase activity(GO:0033188) ceramide cholinephosphotransferase activity(GO:0047493)
0.2 4.7 GO:0008378 galactosyltransferase activity(GO:0008378)
0.1 9.8 GO:0004650 polygalacturonase activity(GO:0004650)
0.1 1.0 GO:0005247 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.1 4.3 GO:0008171 O-methyltransferase activity(GO:0008171)
0.1 1.2 GO:0004096 catalase activity(GO:0004096)
0.1 2.2 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.1 0.4 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.1 1.2 GO:0043047 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.1 4.9 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.1 2.2 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.1 0.4 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.1 2.3 GO:0030599 pectinesterase activity(GO:0030599)
0.1 0.8 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 4.3 GO:0018024 histone-lysine N-methyltransferase activity(GO:0018024)
0.1 1.0 GO:0004084 branched-chain-amino-acid transaminase activity(GO:0004084)
0.1 1.3 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.1 0.5 GO:0008296 3'-5'-exodeoxyribonuclease activity(GO:0008296)
0.1 1.1 GO:0004337 geranyltranstransferase activity(GO:0004337)
0.1 0.7 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.1 0.8 GO:0017091 AU-rich element binding(GO:0017091)
0.1 0.6 GO:0003913 DNA photolyase activity(GO:0003913)
0.1 0.8 GO:0005536 glucokinase activity(GO:0004340) glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.1 0.8 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.1 1.5 GO:0003688 DNA replication origin binding(GO:0003688)
0.1 5.0 GO:0030247 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.1 1.8 GO:0016844 strictosidine synthase activity(GO:0016844)
0.1 1.0 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 0.4 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.1 2.8 GO:0031593 polyubiquitin binding(GO:0031593)
0.1 5.1 GO:0043621 protein self-association(GO:0043621)
0.1 2.5 GO:0051087 chaperone binding(GO:0051087)
0.1 0.7 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 0.4 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.1 0.7 GO:0033613 activating transcription factor binding(GO:0033613)
0.1 3.5 GO:0016759 cellulose synthase activity(GO:0016759)
0.1 0.2 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.1 6.9 GO:0008757 S-adenosylmethionine-dependent methyltransferase activity(GO:0008757)
0.1 3.6 GO:0070001 aspartic-type peptidase activity(GO:0070001)
0.1 1.3 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.1 2.5 GO:0016881 acid-amino acid ligase activity(GO:0016881)
0.1 0.7 GO:0005471 ATP:ADP antiporter activity(GO:0005471)
0.1 0.3 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.1 0.3 GO:0015367 oxoglutarate:malate antiporter activity(GO:0015367)
0.1 0.3 GO:0048038 quinone binding(GO:0048038)
0.1 0.5 GO:0050307 sucrose-phosphate phosphatase activity(GO:0050307)
0.1 1.2 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.1 6.2 GO:0004857 enzyme inhibitor activity(GO:0004857)
0.1 3.9 GO:0004180 carboxypeptidase activity(GO:0004180)
0.1 0.2 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.1 0.3 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.1 0.2 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.1 17.9 GO:0042802 identical protein binding(GO:0042802)
0.1 0.4 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.1 0.2 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.1 0.5 GO:0016849 phosphorus-oxygen lyase activity(GO:0016849)
0.1 0.3 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.1 0.7 GO:0030983 mismatched DNA binding(GO:0030983)
0.1 0.6 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.1 0.2 GO:0032405 single base insertion or deletion binding(GO:0032138) single thymine insertion binding(GO:0032143) mismatch repair complex binding(GO:0032404) MutLalpha complex binding(GO:0032405)
0.0 1.1 GO:0016597 amino acid binding(GO:0016597)
0.0 0.9 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.0 2.8 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 12.0 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.3 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.0 3.6 GO:0003724 RNA helicase activity(GO:0003724)
0.0 1.5 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.9 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.0 0.8 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.5 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.0 4.7 GO:0005507 copper ion binding(GO:0005507)
0.0 3.8 GO:0016209 antioxidant activity(GO:0016209)
0.0 0.1 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 1.6 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 0.8 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 1.6 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.1 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.0 1.2 GO:0003697 single-stranded DNA binding(GO:0003697)
0.0 0.2 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.0 0.3 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.0 0.1 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.0 0.1 GO:0016979 lipoate-protein ligase activity(GO:0016979) lipoate synthase activity(GO:0016992)
0.0 7.6 GO:0046983 protein dimerization activity(GO:0046983)
0.0 1.3 GO:0003777 microtubule motor activity(GO:0003777)
0.0 0.7 GO:0008408 3'-5' exonuclease activity(GO:0008408)
0.0 0.5 GO:0016866 intramolecular transferase activity(GO:0016866)
0.0 0.1 GO:0035514 DNA demethylase activity(GO:0035514)
0.0 0.1 GO:0003916 DNA topoisomerase activity(GO:0003916)
0.0 0.5 GO:0004386 helicase activity(GO:0004386)
0.0 0.1 GO:0008079 translation release factor activity(GO:0003747) translation termination factor activity(GO:0008079)
0.0 0.1 GO:0017050 D-erythro-sphingosine kinase activity(GO:0017050)
0.0 2.1 GO:0043531 ADP binding(GO:0043531)
0.0 0.0 GO:0005458 GDP-mannose transmembrane transporter activity(GO:0005458)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 2.3 PID SMAD2 3NUCLEAR PATHWAY Regulation of nuclear SMAD2/3 signaling
0.5 3.0 PID AP1 PATHWAY AP-1 transcription factor network
0.4 1.6 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.4 2.5 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.3 0.9 PID PI3KCI PATHWAY Class I PI3K signaling events
0.2 1.5 PID CMYB PATHWAY C-MYB transcription factor network
0.2 2.0 PID E2F PATHWAY E2F transcription factor network
0.2 1.3 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.1 0.4 PID HDAC CLASSI PATHWAY Signaling events mediated by HDAC Class I
0.1 1.3 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.1 0.7 PID ATR PATHWAY ATR signaling pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 3.2 REACTOME REGULATION OF INSULIN SECRETION Genes involved in Regulation of Insulin Secretion
0.8 2.3 REACTOME SIGNALING BY TGF BETA RECEPTOR COMPLEX Genes involved in Signaling by TGF-beta Receptor Complex
0.6 3.2 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.4 1.3 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.4 9.0 REACTOME INFLUENZA VIRAL RNA TRANSCRIPTION AND REPLICATION Genes involved in Influenza Viral RNA Transcription and Replication
0.3 1.5 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.2 1.4 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.2 1.5 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.2 1.3 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.2 1.3 REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS Genes involved in Homologous recombination repair of replication-independent double-strand breaks
0.2 0.7 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.1 0.3 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.0 0.2 REACTOME GENERIC TRANSCRIPTION PATHWAY Genes involved in Generic Transcription Pathway
0.0 0.3 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production