Project

GSE43616: Time-course of wild-type Arabidopsis leaf

Navigation
Downloads

Results for AT5G44210

Z-value: 0.32

Transcription factors associated with AT5G44210

Gene Symbol Gene ID Gene Info
AT5G44210
AT5G44210 erf domain protein 9

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ERF9arTal_v1_Chr5_+_17806397_17806397-0.826.8e-08Click!

Activity profile of AT5G44210 motif

Sorted Z-values of AT5G44210 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr5_-_5741500_5741500 0.71 AT5G17420.1
IRX3
Cellulose synthase family protein
arTal_v1_Chr5_+_17714390_17714390 0.61 AT5G44030.2
AT5G44030.1
CESA4
cellulose synthase A4
arTal_v1_Chr1_+_3111694_3111694 0.61 AT1G09610.1
GXM3
glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
arTal_v1_Chr3_+_3203988_3203988 0.56 AT3G10340.1
PAL4
phenylalanine ammonia-lyase 4
arTal_v1_Chr2_-_15589369_15589369 0.45 AT2G37090.1
IRX9
Nucleotide-diphospho-sugar transferases superfamily protein
arTal_v1_Chr5_+_5084524_5084695 0.39 AT5G15630.1
AT5G15630.2
AT5G15630.3
AT5G15630.4
AT5G15630.5
IRX6
COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
arTal_v1_Chr5_+_17715687_17715687 0.36 AT5G44030.3
CESA4
cellulose synthase A4
arTal_v1_Chr1_+_27076020_27076020 0.24 AT1G71930.1
VND7
vascular related NAC-domain protein 7
arTal_v1_Chr1_+_27074702_27074702 0.20 AT1G71930.2
VND7
vascular related NAC-domain protein 7
arTal_v1_Chr3_-_2578276_2578276 0.16 AT3G08500.1
MYB83
myb domain protein 83
arTal_v1_Chr2_-_12996012_12996012 0.11 AT2G30490.1
C4H
cinnamate-4-hydroxylase

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G44210

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.7 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.1 0.6 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.1 0.4 GO:0090059 protoxylem development(GO:0090059)
0.0 0.5 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.0 1.0 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.0 0.4 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:0010330 cellulose synthase complex(GO:0010330)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.6 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.1 0.5 GO:0047517 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018) 1,4-beta-D-xylan synthase activity(GO:0047517)
0.1 1.7 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)