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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G62000

Z-value: 2.42

Transcription factors associated with AT5G62000

Gene Symbol Gene ID Gene Info
AT5G62000
AT5G62000 auxin response factor 2

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ARF2arTal_v1_Chr5_+_24910191_24910358-0.671.1e-04Click!

Activity profile of AT5G62000 motif

Sorted Z-values of AT5G62000 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr4_-_18098633_18098633 8.40 AT4G38770.1
PRP4
proline-rich protein 4
arTal_v1_Chr3_+_5505360_5505360 7.82 AT3G16240.1
DELTA-TIP
delta tonoplast integral protein
arTal_v1_Chr1_-_24606722_24606722 7.62 AT1G66100.1
AT1G66100
Plant thionin
arTal_v1_Chr4_+_13391293_13391344 7.44 AT4G26530.2
AT4G26530.1
FBA5
Aldolase superfamily protein
arTal_v1_Chr4_-_17777445_17777445 7.23 AT4G37800.1
XTH7
xyloglucan endotransglucosylase/hydrolase 7
arTal_v1_Chr4_+_13390754_13390754 6.99 AT4G26530.3
FBA5
Aldolase superfamily protein
arTal_v1_Chr5_+_4757856_4757972 6.91 AT5G14740.3
AT5G14740.6
AT5G14740.1
AT5G14740.7
AT5G14740.8
AT5G14740.2
AT5G14740.4
AT5G14740.5
CA2
carbonic anhydrase 2
arTal_v1_Chr5_+_26298728_26298728 6.85 AT5G65730.1
XTH6
xyloglucan endotransglucosylase/hydrolase 6
arTal_v1_Chr5_-_9082384_9082384 6.85 AT5G26000.1
AT5G26000.2
TGG1
thioglucoside glucohydrolase 1
arTal_v1_Chr3_+_5556710_5556710 6.69 AT3G16370.1
AT3G16370
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr1_+_10375754_10375754 6.30 AT1G29670.1
AT1G29670
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr3_-_5508414_5508414 6.26 AT3G16250.1
PnsB3
NDH-dependent cyclic electron flow 1
arTal_v1_Chr1_+_10375599_10375599 6.21 AT1G29670.2
AT1G29670
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr1_-_7531108_7531108 6.16 AT1G21500.1
AT1G21500
hypothetical protein
arTal_v1_Chr5_-_25343369_25343369 6.15 AT5G63180.1
AT5G63180
Pectin lyase-like superfamily protein
arTal_v1_Chr5_+_22038165_22038165 6.07 AT5G54270.1
LHCB3
light-harvesting chlorophyll B-binding protein 3
arTal_v1_Chr5_+_4758921_4758921 6.06 AT5G14740.9
CA2
carbonic anhydrase 2
arTal_v1_Chr5_-_19648362_19648362 5.86 AT5G48490.1
AT5G48490
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr5_-_4392227_4392227 5.78 AT5G13630.2
GUN5
magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
arTal_v1_Chr5_-_4392429_4392429 5.77 AT5G13630.1
GUN5
magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
arTal_v1_Chr2_+_16130290_16130290 5.73 AT2G38540.1
LP1
lipid transfer protein 1
arTal_v1_Chr5_+_21009347_21009347 5.67 AT5G51720.1
NEET
2 iron, 2 sulfur cluster binding protein
arTal_v1_Chr3_-_3357754_3357754 5.59 AT3G10720.2
AT3G10720
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr3_-_9492655_9492655 5.52 AT3G25920.1
RPL15
ribosomal protein L15
arTal_v1_Chr5_-_6222300_6222300 5.49 AT5G18660.1
PCB2
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr3_-_16448844_16448844 5.48 AT3G44990.1
XTH31
xyloglucan endo-transglycosylase-related 8
arTal_v1_Chr2_+_17592038_17592038 5.44 AT2G42220.1
AT2G42220
Rhodanese/Cell cycle control phosphatase superfamily protein
arTal_v1_Chr1_+_10371675_10371675 5.42 AT1G29660.1
AT1G29660
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr5_+_625254_625254 5.42 AT5G02760.1
AT5G02760
Protein phosphatase 2C family protein
arTal_v1_Chr1_-_5447880_5447880 5.39 AT1G15820.1
LHCB6
light harvesting complex photosystem II subunit 6
arTal_v1_Chr4_-_7493080_7493080 5.39 AT4G12730.1
FLA2
FASCICLIN-like arabinogalactan 2
arTal_v1_Chr1_+_4001113_4001295 5.35 AT1G11860.3
AT1G11860.1
AT1G11860.2
AT1G11860
Glycine cleavage T-protein family
arTal_v1_Chr1_+_3008910_3008910 5.33 AT1G09310.1
AT1G09310
plant/protein (Protein of unknown function, DUF538)
arTal_v1_Chr3_-_11013451_11013451 5.24 AT3G29030.1
EXPA5
expansin A5
arTal_v1_Chr5_+_426226_426226 5.21 AT5G02160.1
AT5G02160
transmembrane protein
arTal_v1_Chr5_-_25898171_25898171 5.20 AT5G64770.1
RGF9
root meristem growth factor
arTal_v1_Chr1_-_59215_59215 5.20 AT1G01120.1
KCS1
3-ketoacyl-CoA synthase 1
arTal_v1_Chr5_+_26767599_26767599 5.16 AT5G67070.1
RALFL34
ralf-like 34
arTal_v1_Chr2_-_7954680_7954785 5.14 AT2G18300.1
AT2G18300.3
AT2G18300.2
HBI1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr1_-_26711462_26711587 5.12 AT1G70830.4
AT1G70830.2
AT1G70830.1
AT1G70830.5
AT1G70830.3
MLP28
MLP-like protein 28
arTal_v1_Chr3_+_6510982_6510982 4.94 AT3G18890.1
Tic62
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr3_-_7377186_7377226 4.94 AT3G21055.1
AT3G21055.2
PSBTN
photosystem II subunit T
arTal_v1_Chr3_-_20341103_20341176 4.92 AT3G54890.3
AT3G54890.4
AT3G54890.2
AT3G54890.1
LHCA1
chlorophyll a-b binding protein 6
arTal_v1_Chr1_+_10477885_10477885 4.89 AT1G29930.1
CAB1
chlorophyll A/B binding protein 1
arTal_v1_Chr4_-_17831619_17831619 4.88 AT4G37925.1
NdhM
subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex
arTal_v1_Chr5_-_14562863_14562863 4.86 AT5G36910.1
THI2.2
thionin 2.2
arTal_v1_Chr5_+_1664040_1664062 4.79 AT5G05580.2
AT5G05580.1
FAD8
fatty acid desaturase 8
arTal_v1_Chr5_-_8916856_8916856 4.78 AT5G25610.1
RD22
BURP domain-containing protein
arTal_v1_Chr1_-_6999839_6999839 4.75 AT1G20190.1
EXPA11
expansin 11
arTal_v1_Chr2_-_15474717_15474828 4.74 AT2G36870.2
AT2G36870.1
XTH32
xyloglucan endotransglucosylase/hydrolase 32
arTal_v1_Chr1_+_898480_898480 4.73 AT1G03600.1
PSB27
photosystem II family protein
arTal_v1_Chr2_+_13647699_13647699 4.72 AT2G32100.1
OFP16
ovate family protein 16
arTal_v1_Chr1_-_11216141_11216141 4.67 AT1G31330.1
PSAF
photosystem I subunit F
arTal_v1_Chr5_-_8707885_8707885 4.66 AT5G25190.1
ESE3
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr2_-_12433796_12433796 4.64 AT2G28950.1
EXPA6
expansin A6
arTal_v1_Chr3_-_3356811_3356811 4.64 AT3G10720.1
AT3G10720
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr4_+_12660687_12660687 4.61 AT4G24510.1
CER2
HXXXD-type acyl-transferase family protein
arTal_v1_Chr2_+_9636346_9636492 4.47 AT2G22670.1
AT2G22670.4
AT2G22670.2
AT2G22670.5
AT2G22670.3
IAA8
indoleacetic acid-induced protein 8
arTal_v1_Chr2_-_1824480_1824480 4.45 AT2G05100.1
AT2G05100.2
LHCB2.1
photosystem II light harvesting complex protein 2.1
arTal_v1_Chr1_-_6999523_6999523 4.45 AT1G20190.2
EXPA11
expansin 11
arTal_v1_Chr3_-_6882235_6882315 4.44 AT3G19820.3
AT3G19820.1
AT3G19820.2
DWF1
cell elongation protein / DWARF1 / DIMINUTO (DIM)
arTal_v1_Chr5_+_6457026_6457026 4.42 AT5G19190.1
AT5G19190
hypothetical protein
arTal_v1_Chr1_-_1043887_1043887 4.42 AT1G04040.1
AT1G04040
HAD superfamily, subfamily IIIB acid phosphatase
arTal_v1_Chr5_-_3183984_3184110 4.40 AT5G10150.2
AT5G10150.1
AT5G10150
UPSTREAM OF FLC protein (DUF966)
arTal_v1_Chr4_+_13725546_13725546 4.39 AT4G27440.2
AT4G27440.1
PORB
protochlorophyllide oxidoreductase B
arTal_v1_Chr3_+_21076505_21076505 4.37 AT3G56940.1
AT3G56940.2
CRD1
dicarboxylate diiron protein, putative (Crd1)
arTal_v1_Chr3_+_22086333_22086333 4.33 AT3G59780.1
AT3G59780
Rhodanese/Cell cycle control phosphatase superfamily protein
arTal_v1_Chr3_+_18049571_18049571 4.33 AT3G48730.1
GSA2
glutamate-1-semialdehyde 2,1-aminomutase 2
arTal_v1_Chr5_-_3183484_3183484 4.28 AT5G10150.3
AT5G10150.4
AT5G10150
UPSTREAM OF FLC protein (DUF966)
arTal_v1_Chr4_+_12876822_12876948 4.27 AT4G25080.6
AT4G25080.5
AT4G25080.2
AT4G25080.1
AT4G25080.3
AT4G25080.4
CHLM
magnesium-protoporphyrin IX methyltransferase
arTal_v1_Chr3_+_23345754_23345754 4.26 AT3G63200.1
PLP9
PATATIN-like protein 9
arTal_v1_Chr3_-_23165387_23165387 4.25 AT3G62630.1
AT3G62630
stress response NST1-like protein (DUF1645)
arTal_v1_Chr5_+_21479382_21479382 4.24 AT5G52970.1
AT5G52970.2
AT5G52970
thylakoid lumen 15.0 kDa protein
arTal_v1_Chr4_-_16583075_16583075 4.22 AT4G34760.1
AT4G34760
SAUR-like auxin-responsive protein family
arTal_v1_Chr4_-_18165740_18165740 4.21 AT4G38970.2
FBA2
fructose-bisphosphate aldolase 2
arTal_v1_Chr4_-_18166008_18166008 4.21 AT4G38970.1
FBA2
fructose-bisphosphate aldolase 2
arTal_v1_Chr3_-_5469594_5469594 4.19 AT3G16140.1
PSAH-1
photosystem I subunit H-1
arTal_v1_Chr1_+_24778257_24778257 4.19 AT1G66430.1
AT1G66430
pfkB-like carbohydrate kinase family protein
arTal_v1_Chr5_+_1919080_1919179 4.17 AT5G06290.1
AT5G06290.2
2-Cys Prx B
2-cysteine peroxiredoxin B
arTal_v1_Chr4_-_15059846_15059846 4.16 AT4G30950.1
FAD6
fatty acid desaturase 6
arTal_v1_Chr1_+_2047886_2047886 4.15 AT1G06680.2
PSBP-1
photosystem II subunit P-1
arTal_v1_Chr1_+_2047634_2047634 4.15 AT1G06680.1
PSBP-1
photosystem II subunit P-1
arTal_v1_Chr5_-_9620533_9620588 4.14 AT5G27290.2
AT5G27290.1
AT5G27290
stress regulated protein
arTal_v1_Chr2_+_17894796_17894796 4.14 AT2G43030.1
AT2G43030
Ribosomal protein L3 family protein
arTal_v1_Chr1_+_4839801_4839853 4.10 AT1G14150.1
AT1G14150.2
PnsL2
PsbQ-like 2
arTal_v1_Chr1_-_28603932_28603932 4.10 AT1G76240.1
AT1G76240
DUF241 domain protein (DUF241)
arTal_v1_Chr1_+_17918207_17918207 4.10 AT1G48480.1
RKL1
receptor-like kinase 1
arTal_v1_Chr1_+_10149791_10149791 4.10 AT1G29070.1
AT1G29070
Ribosomal protein L34
arTal_v1_Chr2_+_19191247_19191247 4.09 AT2G46710.1
ROPGAP3
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
arTal_v1_Chr1_-_23956260_23956304 4.09 AT1G64510.1
AT1G64510.2
AT1G64510
Translation elongation factor EF1B/ribosomal protein S6 family protein
arTal_v1_Chr3_+_188321_188384 4.08 AT3G01480.1
AT3G01480.2
CYP38
cyclophilin 38
arTal_v1_Chr4_+_7521257_7521322 4.05 AT4G12800.2
AT4G12800.1
PSAL
photosystem I subunit l
arTal_v1_Chr5_+_22530007_22530007 4.05 AT5G55620.1
AT5G55620
hypothetical protein
arTal_v1_Chr1_+_3664187_3664187 4.04 AT1G10960.1
FD1
ferredoxin 1
arTal_v1_Chr2_-_12173951_12173991 4.04 AT2G28470.2
AT2G28470.4
AT2G28470.1
AT2G28470.3
BGAL8
beta-galactosidase 8
arTal_v1_Chr1_+_9740508_9740508 4.04 AT1G27950.1
LTPG1
glycosylphosphatidylinositol-anchored lipid protein transfer 1
arTal_v1_Chr5_+_208866_208866 4.04 AT5G01530.1
LHCB4.1
light harvesting complex photosystem II
arTal_v1_Chr4_-_17355891_17356037 4.03 AT4G36850.3
AT4G36850.4
AT4G36850.2
AT4G36850.1
AT4G36850
PQ-loop repeat family protein / transmembrane family protein
arTal_v1_Chr4_+_620691_620697 4.03 AT4G01460.1
AT4G01460.2
AT4G01460
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr3_-_2334185_2334185 4.02 AT3G07320.1
AT3G07320
O-Glycosyl hydrolases family 17 protein
arTal_v1_Chr2_-_2588448_2588448 4.01 AT2G06520.1
PSBX
photosystem II subunit X
arTal_v1_Chr2_-_15790139_15790139 4.00 AT2G37640.1
EXP3
Barwin-like endoglucanases superfamily protein
arTal_v1_Chr3_-_19595834_19595834 3.98 AT3G52870.1
AT3G52870
IQ calmodulin-binding motif family protein
arTal_v1_Chr1_-_4265156_4265156 3.97 AT1G12500.1
AT1G12500
Nucleotide-sugar transporter family protein
arTal_v1_Chr1_+_24647121_24647121 3.97 AT1G66180.1
AT1G66180
Eukaryotic aspartyl protease family protein
arTal_v1_Chr2_-_15789605_15789605 3.96 AT2G37640.2
EXP3
Barwin-like endoglucanases superfamily protein
arTal_v1_Chr1_-_26515188_26515255 3.95 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
arTal_v1_Chr3_-_8589754_8589754 3.94 AT3G23810.1
SAHH2
S-adenosyl-l-homocysteine (SAH) hydrolase 2
arTal_v1_Chr4_-_12822497_12822497 3.94 AT4G24930.1
AT4G24930
thylakoid lumenal 17.9 kDa protein, chloroplast
arTal_v1_Chr1_+_7886323_7886323 3.94 AT1G22330.1
AT1G22330
RNA-binding (RRM/RBD/RNP motifs) family protein
arTal_v1_Chr5_-_18588792_18588792 3.91 AT5G45820.1
CIPK20
CBL-interacting protein kinase 20
arTal_v1_Chr2_-_12277417_12277417 3.91 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
arTal_v1_Chr4_+_13177356_13177356 3.91 AT4G25960.1
ABCB2
P-glycoprotein 2
arTal_v1_Chr1_+_1136078_1136078 3.90 AT1G04250.1
AXR3
AUX/IAA transcriptional regulator family protein
arTal_v1_Chr5_+_18530834_18530834 3.90 AT5G45680.1
FKBP13
FK506-binding protein 13
arTal_v1_Chr1_+_28428671_28428671 3.89 AT1G75710.1
AT1G75710
C2H2-like zinc finger protein
arTal_v1_Chr3_-_3277930_3277930 3.89 AT3G10520.1
HB2
hemoglobin 2
arTal_v1_Chr1_-_84864_84946 3.88 AT1G01190.1
AT1G01190.2
CYP78A8
cytochrome P450, family 78, subfamily A, polypeptide 8
arTal_v1_Chr3_+_2563803_2563803 3.88 AT3G08030.1
AT3G08030
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
arTal_v1_Chr1_-_21614169_21614169 3.84 AT1G58270.1
ZW9
TRAF-like family protein
arTal_v1_Chr5_+_17937622_17937622 3.84 AT5G44530.3
AT5G44530.2
AT5G44530.1
AT5G44530
Subtilase family protein
arTal_v1_Chr3_+_2564153_2564153 3.83 AT3G08030.2
AT3G08030
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
arTal_v1_Chr4_-_11885533_11885533 3.82 AT4G22570.2
AT4G22570.1
APT3
adenine phosphoribosyl transferase 3
arTal_v1_Chr5_-_7419335_7419335 3.81 AT5G22390.1
AT5G22390
FANTASTIC four-like protein (DUF3049)
arTal_v1_Chr5_+_24494291_24494291 3.79 AT5G60890.1
MYB34
myb domain protein 34
arTal_v1_Chr2_-_12277245_12277245 3.78 AT2G28630.1
KCS12
3-ketoacyl-CoA synthase 12
arTal_v1_Chr5_-_24990331_24990331 3.77 AT5G62220.1
GT18
glycosyltransferase 18
arTal_v1_Chr4_-_13958107_13958107 3.77 AT4G28080.1
AT4G28080
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr4_-_15931332_15931422 3.77 AT4G33010.2
AT4G33010.1
GLDP1
glycine decarboxylase P-protein 1
arTal_v1_Chr1_+_25374072_25374222 3.76 AT1G67700.1
AT1G67700.2
AT1G67700.5
AT1G67700.4
AT1G67700.3
AT1G67700
multidrug resistance protein
arTal_v1_Chr1_-_227302_227302 3.76 AT1G01620.2
PIP1C
plasma membrane intrinsic protein 1C
arTal_v1_Chr1_-_227543_227543 3.75 AT1G01620.1
PIP1C
plasma membrane intrinsic protein 1C
arTal_v1_Chr5_+_4974671_4974671 3.75 AT5G15310.2
AT5G15310.4
AT5G15310.3
AT5G15310.1
MYB16
myb domain protein 16
arTal_v1_Chr4_-_17606924_17607050 3.73 AT4G37450.1
AT4G37450.2
AGP18
arabinogalactan protein 18
arTal_v1_Chr3_+_18973126_18973126 3.73 AT3G51080.1
GATA6
GATA transcription factor 6
arTal_v1_Chr1_-_23137254_23137254 3.72 AT1G62510.1
AT1G62510
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr2_+_10241875_10241875 3.72 AT2G24090.1
PRPL35
Ribosomal protein L35
arTal_v1_Chr4_+_15819489_15819489 3.71 AT4G32800.1
AT4G32800
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr1_-_26538437_26538437 3.71 AT1G70410.2
BCA4
beta carbonic anhydrase 4
arTal_v1_Chr1_-_21626402_21626402 3.70 AT1G58290.1
HEMA1
Glutamyl-tRNA reductase family protein
arTal_v1_Chr5_+_25016860_25016860 3.70 AT5G62280.1
AT5G62280
DUF1442 family protein (DUF1442)
arTal_v1_Chr4_+_10651744_10651744 3.69 AT4G19530.1
AT4G19530.2
AT4G19530
disease resistance protein (TIR-NBS-LRR class) family
arTal_v1_Chr5_-_16820195_16820195 3.69 AT5G42070.1
AT5G42070
hypothetical protein
arTal_v1_Chr3_+_18417568_18417568 3.67 AT3G49670.1
BAM2
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr4_-_18370698_18370698 3.66 AT4G39510.1
CYP96A12
cytochrome P450, family 96, subfamily A, polypeptide 12
arTal_v1_Chr3_+_19342014_19342024 3.66 AT3G52150.1
AT3G52150.2
PSRP2
RNA-binding (RRM/RBD/RNP motifs) family protein
arTal_v1_Chr2_-_1149261_1149261 3.66 AT2G03750.1
AT2G03750
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr4_+_17986384_17986384 3.64 AT4G38430.1
ROPGEF1
rho guanyl-nucleotide exchange factor 1
arTal_v1_Chr3_-_19467455_19467455 3.63 AT3G52500.1
AT3G52500
Eukaryotic aspartyl protease family protein
arTal_v1_Chr1_-_6487153_6487153 3.63 AT1G18810.1
AT1G18810
phytochrome kinase substrate-like protein
arTal_v1_Chr3_+_20016837_20016892 3.63 AT3G54050.1
AT3G54050.2
HCEF1
high cyclic electron flow 1
arTal_v1_Chr2_+_14733975_14733975 3.61 AT2G34925.1
CLE42
CLAVATA3/ESR-RELATED 42
arTal_v1_Chr5_-_20940895_20940895 3.61 AT5G51550.1
EXL3
EXORDIUM like 3
arTal_v1_Chr1_-_16709713_16709713 3.59 AT1G44000.1
AT1G44000
STAY-GREEN-like protein
arTal_v1_Chr3_-_489467_489467 3.59 AT3G02380.1
COL2
CONSTANS-like 2
arTal_v1_Chr5_-_19899301_19899301 3.58 AT5G49100.1
AT5G49100
vitellogenin-like protein
arTal_v1_Chr5_+_21020014_21020014 3.58 AT5G51750.1
SBT1.3
subtilase 1.3
arTal_v1_Chr5_-_990630_990630 3.57 AT5G03760.1
ATCSLA09
Nucleotide-diphospho-sugar transferases superfamily protein
arTal_v1_Chr4_+_9803624_9803624 3.54 AT4G17600.1
LIL3:1
Chlorophyll A-B binding family protein
arTal_v1_Chr1_-_6283348_6283348 3.53 AT1G18265.1
AT1G18265
zein-binding protein (Protein of unknown function, DUF593)
arTal_v1_Chr2_+_19521774_19521774 3.51 AT2G47590.1
PHR2
photolyase/blue-light receptor 2
arTal_v1_Chr5_+_25524045_25524045 3.51 AT5G63780.2
SHA1
RING/FYVE/PHD zinc finger superfamily protein
arTal_v1_Chr4_-_2352025_2352025 3.51 AT4G04640.1
ATPC1
ATPase, F1 complex, gamma subunit protein
arTal_v1_Chr1_+_22699715_22699715 3.51 AT1G61520.3
LHCA3
PSI type III chlorophyll a/b-binding protein
arTal_v1_Chr1_+_22700073_22700073 3.51 AT1G61520.2
LHCA3
PSI type III chlorophyll a/b-binding protein
arTal_v1_Chr1_-_15607966_15607966 3.50 AT1G41830.1
SKS6
SKU5-similar 6
arTal_v1_Chr1_+_22699893_22699893 3.50 AT1G61520.1
LHCA3
PSI type III chlorophyll a/b-binding protein
arTal_v1_Chr5_+_25523827_25523827 3.50 AT5G63780.1
SHA1
RING/FYVE/PHD zinc finger superfamily protein
arTal_v1_Chr1_-_20172364_20172364 3.49 AT1G54040.1
ESP
epithiospecifier protein
arTal_v1_Chr1_-_20173933_20173949 3.49 AT1G54040.3
AT1G54040.2
ESP
epithiospecifier protein
arTal_v1_Chr4_-_17835017_17835017 3.49 AT4G37930.1
SHM1
serine transhydroxymethyltransferase 1
arTal_v1_Chr2_-_14523568_14523568 3.48 AT2G34420.1
LHB1B2
photosystem II light harvesting complex protein B1B2
arTal_v1_Chr4_-_1114151_1114158 3.48 AT4G02530.1
AT4G02530.2
AT4G02530.3
AT4G02530
chloroplast thylakoid lumen protein
arTal_v1_Chr2_+_14427509_14427893 3.47 AT2G34170.3
AT2G34170.2
AT2G34170.1
AT2G34170.4
AT2G34170.5
AT2G34170.6
AT2G34170
hypothetical protein (DUF688)
arTal_v1_Chr2_-_11173278_11173278 3.47 AT2G26250.1
KCS10
3-ketoacyl-CoA synthase 10
arTal_v1_Chr4_+_14192569_14192569 3.47 AT4G28720.1
YUC8
Flavin-binding monooxygenase family protein
arTal_v1_Chr1_-_26537422_26537426 3.46 AT1G70410.3
AT1G70410.1
BCA4
beta carbonic anhydrase 4
arTal_v1_Chr3_-_20257916_20257916 3.46 AT3G54720.1
AMP1
Peptidase M28 family protein
arTal_v1_Chr4_+_160643_160643 3.46 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
arTal_v1_Chr3_-_17837998_17837998 3.45 AT3G48200.1
AT3G48200
transmembrane protein
arTal_v1_Chr1_-_18405493_18405681 3.44 AT1G49730.3
AT1G49730.4
AT1G49730.2
AT1G49730.5
AT1G49730.1
AT1G49730
Protein kinase superfamily protein
arTal_v1_Chr1_+_418726_418767 3.44 AT1G02205.4
AT1G02205.3
AT1G02205.5
AT1G02205.1
CER1
Fatty acid hydroxylase superfamily
arTal_v1_Chr3_+_6752422_6752422 3.43 AT3G19480.1
AT3G19480
D-3-phosphoglycerate dehydrogenase
arTal_v1_Chr4_-_8350030_8350030 3.43 AT4G14550.4
IAA14
indole-3-acetic acid inducible 14
arTal_v1_Chr3_+_18262290_18262511 3.42 AT3G49260.1
AT3G49260.3
AT3G49260.2
AT3G49260.4
iqd21
IQ-domain 21
arTal_v1_Chr3_-_19541284_19541284 3.40 AT3G52720.4
AT3G52720.2
ACA1
alpha carbonic anhydrase 1
arTal_v1_Chr3_+_5116021_5116021 3.39 AT3G15190.1
PRPS20
chloroplast 30S ribosomal protein S20
arTal_v1_Chr1_-_11872926_11872926 3.37 AT1G32780.1
AT1G32780
GroES-like zinc-binding dehydrogenase family protein
arTal_v1_Chr1_+_18802552_18802552 3.37 AT1G50732.1
AT1G50732
transmembrane protein
arTal_v1_Chr4_-_18125559_18125559 3.37 AT4G38840.1
AT4G38840
SAUR-like auxin-responsive protein family
arTal_v1_Chr3_-_19542160_19542286 3.36 AT3G52720.3
AT3G52720.1
ACA1
alpha carbonic anhydrase 1
arTal_v1_Chr3_-_20806333_20806333 3.36 AT3G56060.1
AT3G56060
Glucose-methanol-choline (GMC) oxidoreductase family protein
arTal_v1_Chr3_+_11252807_11252807 3.36 AT3G29320.1
PHS1
Glycosyl transferase, family 35
arTal_v1_Chr1_-_6579314_6579314 3.35 AT1G19050.1
ARR7
response regulator 7
arTal_v1_Chr5_-_1726932_1727068 3.35 AT5G05740.1
AT5G05740.3
AT5G05740.2
EGY2
ethylene-dependent gravitropism-deficient and yellow-green-like 2
arTal_v1_Chr1_+_12267808_12267808 3.35 AT1G33811.1
AT1G33811
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr3_-_15617149_15617149 3.34 AT3G43720.2
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr1_+_23911024_23911024 3.34 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
arTal_v1_Chr5_+_16768935_16768935 3.33 AT5G41900.1
AT5G41900
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr5_+_7103384_7103419 3.32 AT5G20935.1
AT5G20935.2
CRR42
DUF3148 family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G62000

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
2.3 14.0 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
2.3 7.0 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
2.1 14.9 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
2.0 8.1 GO:0010480 microsporocyte differentiation(GO:0010480)
1.9 5.6 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
1.7 31.0 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
1.6 4.9 GO:1900032 regulation of trichome patterning(GO:1900032) negative regulation of trichome patterning(GO:1900033)
1.6 4.9 GO:0015840 urea transport(GO:0015840)
1.6 6.4 GO:0015669 gas transport(GO:0015669)
1.6 28.1 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
1.5 1.5 GO:0010235 guard mother cell cytokinesis(GO:0010235)
1.4 8.2 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
1.4 8.1 GO:0031116 positive regulation of microtubule polymerization(GO:0031116)
1.2 3.7 GO:0035017 cuticle pattern formation(GO:0035017)
1.2 7.2 GO:0043447 alkane biosynthetic process(GO:0043447)
1.2 2.4 GO:0006307 DNA dealkylation involved in DNA repair(GO:0006307)
1.1 5.7 GO:0010450 inflorescence meristem growth(GO:0010450)
1.1 5.7 GO:0071260 cellular response to mechanical stimulus(GO:0071260)
1.1 3.3 GO:0010541 acropetal auxin transport(GO:0010541)
1.1 3.3 GO:0090058 metaxylem development(GO:0090058)
1.1 2.2 GO:0010444 guard mother cell differentiation(GO:0010444)
1.1 16.9 GO:0015976 carbon utilization(GO:0015976)
1.1 3.2 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
1.0 1.0 GO:0036292 DNA rewinding(GO:0036292)
1.0 7.3 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
1.0 8.3 GO:0000132 establishment of mitotic spindle orientation(GO:0000132) establishment of mitotic spindle localization(GO:0040001) establishment of spindle localization(GO:0051293) establishment of spindle orientation(GO:0051294) spindle localization(GO:0051653)
1.0 5.1 GO:0005980 glycogen catabolic process(GO:0005980)
1.0 3.0 GO:0033506 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
1.0 3.9 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
1.0 6.9 GO:0090506 axillary shoot meristem initiation(GO:0090506)
1.0 16.2 GO:0006782 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.9 48.4 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.9 27.2 GO:0042335 cuticle development(GO:0042335)
0.9 4.6 GO:0019218 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.9 3.7 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.9 11.0 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.9 2.7 GO:0046506 sulfolipid metabolic process(GO:0046505) sulfolipid biosynthetic process(GO:0046506)
0.9 6.0 GO:0009099 valine biosynthetic process(GO:0009099)
0.9 2.6 GO:0032990 cell part morphogenesis(GO:0032990) mitochondrion morphogenesis(GO:0070584)
0.8 3.3 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.8 5.8 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.8 3.3 GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process(GO:0046901)
0.8 4.1 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.8 32.3 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.8 2.4 GO:0009202 deoxyribonucleoside triphosphate biosynthetic process(GO:0009202)
0.8 2.4 GO:0048478 replication fork protection(GO:0048478)
0.8 4.7 GO:0051098 regulation of binding(GO:0051098)
0.8 3.9 GO:0010067 procambium histogenesis(GO:0010067)
0.8 2.3 GO:0055068 nickel cation transmembrane transport(GO:0035444) cobalt ion homeostasis(GO:0055068)
0.8 3.1 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.8 19.8 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.8 2.3 GO:0019354 siroheme biosynthetic process(GO:0019354) siroheme metabolic process(GO:0046156)
0.8 12.1 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.7 3.7 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.7 6.7 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.7 2.2 GO:0006434 seryl-tRNA aminoacylation(GO:0006434) selenocysteinyl-tRNA(Sec) biosynthetic process(GO:0097056)
0.7 16.4 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.7 3.0 GO:0030203 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.7 6.6 GO:0006168 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.7 1.5 GO:1990937 xylan acetylation(GO:1990937)
0.7 2.9 GO:0030417 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.7 44.3 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.7 3.5 GO:0010226 response to lithium ion(GO:0010226)
0.7 3.5 GO:0006106 fumarate metabolic process(GO:0006106)
0.7 2.1 GO:1990532 stress response to nickel ion(GO:1990532)
0.7 2.1 GO:0009102 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.7 0.7 GO:2000736 regulation of stem cell population maintenance(GO:2000036) regulation of stem cell differentiation(GO:2000736)
0.7 8.2 GO:0007143 female meiotic division(GO:0007143)
0.7 3.3 GO:0018206 peptidyl-methionine modification(GO:0018206)
0.7 2.0 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.7 1.3 GO:0031297 replication fork processing(GO:0031297)
0.7 2.6 GO:1902975 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.6 3.2 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.6 7.1 GO:0010206 photosystem II repair(GO:0010206)
0.6 1.9 GO:0071156 negative regulation of fatty acid biosynthetic process(GO:0045717) regulation of cell cycle arrest(GO:0071156) positive regulation of cell cycle arrest(GO:0071158)
0.6 1.9 GO:0009263 deoxyribonucleotide biosynthetic process(GO:0009263)
0.6 1.3 GO:0042539 hypotonic salinity response(GO:0042539)
0.6 0.6 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.6 6.2 GO:0009405 pathogenesis(GO:0009405)
0.6 3.7 GO:0000719 photoreactive repair(GO:0000719)
0.6 4.9 GO:0033314 mitotic DNA replication checkpoint(GO:0033314)
0.6 2.4 GO:1900370 positive regulation of RNA interference(GO:1900370)
0.6 9.1 GO:0010109 regulation of photosynthesis(GO:0010109)
0.6 1.8 GO:0000050 urea cycle(GO:0000050)
0.6 2.4 GO:0009647 skotomorphogenesis(GO:0009647)
0.6 1.2 GO:0040014 regulation of multicellular organism growth(GO:0040014)
0.6 3.0 GO:0010362 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.6 3.6 GO:0043100 pyrimidine nucleobase salvage(GO:0043100)
0.6 4.0 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
0.6 2.3 GO:0080003 thalianol metabolic process(GO:0080003)
0.6 7.8 GO:0048759 xylem vessel member cell differentiation(GO:0048759)
0.5 1.6 GO:0009996 negative regulation of cell fate specification(GO:0009996) negative regulation of trichoblast fate specification(GO:0010062) negative regulation of cell fate commitment(GO:0010454) negative regulation of plant epidermal cell differentiation(GO:1903889)
0.5 1.6 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.5 3.8 GO:0010424 DNA methylation on cytosine within a CG sequence(GO:0010424)
0.5 2.7 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.5 2.1 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.5 2.1 GO:0035964 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.5 9.1 GO:0010052 guard cell differentiation(GO:0010052)
0.5 16.0 GO:0006284 base-excision repair(GO:0006284)
0.5 2.7 GO:0010155 regulation of proton transport(GO:0010155)
0.5 5.3 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.5 0.5 GO:0051180 vitamin transport(GO:0051180)
0.5 5.7 GO:0009641 shade avoidance(GO:0009641)
0.5 2.1 GO:0009865 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.5 4.6 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.5 1.5 GO:0034969 histone arginine methylation(GO:0034969)
0.5 2.5 GO:0035627 ceramide transport(GO:0035627)
0.5 1.5 GO:0043953 protein transport by the Tat complex(GO:0043953)
0.5 3.0 GO:0022403 cell cycle phase(GO:0022403) biological phase(GO:0044848) mitotic cell cycle phase(GO:0098763)
0.5 2.5 GO:0045003 double-strand break repair via synthesis-dependent strand annealing(GO:0045003)
0.5 1.5 GO:0090355 positive regulation of auxin metabolic process(GO:0090355)
0.5 3.0 GO:0033206 meiotic cytokinesis(GO:0033206)
0.5 15.3 GO:0016128 phytosteroid metabolic process(GO:0016128) brassinosteroid metabolic process(GO:0016131)
0.5 3.9 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.5 5.9 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.5 8.3 GO:0000373 Group II intron splicing(GO:0000373)
0.5 1.5 GO:0046102 inosine catabolic process(GO:0006148) inosine metabolic process(GO:0046102)
0.5 7.3 GO:0048564 photosystem I assembly(GO:0048564)
0.5 25.8 GO:0019684 photosynthesis, light reaction(GO:0019684)
0.5 7.3 GO:0009085 lysine biosynthetic process(GO:0009085) lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.5 1.4 GO:1902969 mitotic DNA replication(GO:1902969)
0.5 1.4 GO:0006666 3-keto-sphinganine metabolic process(GO:0006666)
0.5 1.4 GO:0060236 regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
0.5 1.9 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.5 0.5 GO:0046500 S-adenosylmethionine metabolic process(GO:0046500)
0.5 1.8 GO:0099636 cytoplasmic streaming(GO:0099636)
0.5 1.4 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.5 1.8 GO:0009660 amyloplast organization(GO:0009660)
0.4 1.8 GO:0044154 histone H3-K14 acetylation(GO:0044154)
0.4 2.7 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.4 2.2 GO:1901006 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.4 1.3 GO:0071258 cellular response to gravity(GO:0071258)
0.4 1.8 GO:0015739 sialic acid transport(GO:0015739)
0.4 1.3 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.4 1.3 GO:0033567 DNA replication, Okazaki fragment processing(GO:0033567)
0.4 2.6 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.4 2.6 GO:0010306 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.4 3.0 GO:0009803 cinnamic acid metabolic process(GO:0009803)
0.4 0.8 GO:0032411 positive regulation of transporter activity(GO:0032411) positive regulation of ion transmembrane transporter activity(GO:0032414) positive regulation of anion channel activity(GO:1901529) positive regulation of anion transport(GO:1903793) positive regulation of anion transmembrane transport(GO:1903961)
0.4 0.8 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.4 3.8 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.4 19.6 GO:0015979 photosynthesis(GO:0015979)
0.4 1.7 GO:0048462 carpel formation(GO:0048462)
0.4 1.2 GO:0015709 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.4 0.8 GO:0010981 regulation of cell wall macromolecule metabolic process(GO:0010981) regulation of plant-type cell wall cellulose biosynthetic process(GO:2001009)
0.4 1.2 GO:0045117 thiamine pyrophosphate transport(GO:0030974) vitamin transmembrane transport(GO:0035461) azole transport(GO:0045117)
0.4 2.0 GO:0010338 leaf formation(GO:0010338)
0.4 1.6 GO:1902932 positive regulation of alcohol biosynthetic process(GO:1902932)
0.4 1.1 GO:0080141 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.4 1.5 GO:1901672 positive regulation of systemic acquired resistance(GO:1901672)
0.4 6.6 GO:0006112 glycogen metabolic process(GO:0005977) energy reserve metabolic process(GO:0006112)
0.4 0.7 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.4 2.2 GO:0097502 mannosylation(GO:0097502)
0.4 1.1 GO:0010266 response to vitamin B1(GO:0010266)
0.4 3.3 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.4 2.5 GO:0045597 positive regulation of cell differentiation(GO:0045597)
0.4 24.9 GO:0007018 microtubule-based movement(GO:0007018)
0.4 4.6 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.4 2.5 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.4 3.5 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.4 2.1 GO:0010047 fruit dehiscence(GO:0010047)
0.4 1.8 GO:0009806 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.3 1.7 GO:0006346 methylation-dependent chromatin silencing(GO:0006346)
0.3 1.0 GO:0006059 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.3 1.7 GO:0010589 leaf proximal/distal pattern formation(GO:0010589)
0.3 2.4 GO:0051127 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.3 0.3 GO:0031929 TOR signaling(GO:0031929)
0.3 1.3 GO:0032418 lysosome localization(GO:0032418)
0.3 7.3 GO:0009686 gibberellin biosynthetic process(GO:0009686)
0.3 3.3 GO:0009554 megasporogenesis(GO:0009554)
0.3 1.3 GO:0080094 response to trehalose-6-phosphate(GO:0080094)
0.3 1.9 GO:0090057 root radial pattern formation(GO:0090057)
0.3 1.0 GO:0001738 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.3 1.3 GO:0046741 transport of virus in host, tissue to tissue(GO:0046741)
0.3 0.9 GO:0010184 cytokinin transport(GO:0010184)
0.3 6.3 GO:0005983 starch catabolic process(GO:0005983)
0.3 3.7 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.3 1.9 GO:0009954 proximal/distal pattern formation(GO:0009954)
0.3 1.6 GO:0007142 male meiosis II(GO:0007142)
0.3 1.2 GO:0080119 ER body organization(GO:0080119)
0.3 3.2 GO:0044030 regulation of DNA methylation(GO:0044030)
0.3 4.1 GO:0010274 hydrotropism(GO:0010274)
0.3 6.4 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.3 1.2 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.3 0.9 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.3 13.8 GO:0019759 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.3 3.4 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.3 4.9 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.3 23.4 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.3 4.6 GO:0006833 water transport(GO:0006833) fluid transport(GO:0042044)
0.3 2.0 GO:0006880 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.3 6.2 GO:0010492 maintenance of shoot apical meristem identity(GO:0010492)
0.3 6.7 GO:0007264 small GTPase mediated signal transduction(GO:0007264)
0.3 0.8 GO:0070193 synaptonemal complex assembly(GO:0007130) synaptonemal complex organization(GO:0070193)
0.3 2.8 GO:0042793 transcription from plastid promoter(GO:0042793)
0.3 1.9 GO:0072337 modified amino acid transport(GO:0072337)
0.3 1.1 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.3 4.4 GO:0009299 mRNA transcription(GO:0009299)
0.3 4.1 GO:0015743 malate transport(GO:0015743)
0.3 1.6 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.3 1.9 GO:0046471 phosphatidylglycerol biosynthetic process(GO:0006655) phosphatidylglycerol metabolic process(GO:0046471)
0.3 1.6 GO:0051754 meiotic sister chromatid cohesion, centromeric(GO:0051754)
0.3 2.1 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.3 1.8 GO:0010439 regulation of glucosinolate biosynthetic process(GO:0010439)
0.3 1.0 GO:0090342 regulation of cell aging(GO:0090342)
0.3 1.8 GO:0006021 inositol biosynthetic process(GO:0006021)
0.3 0.8 GO:0042873 phosphoglycerate transport(GO:0015713) phosphoenolpyruvate transport(GO:0015714) aldonate transport(GO:0042873)
0.3 5.4 GO:0045493 xylan catabolic process(GO:0045493)
0.3 2.3 GO:0071249 cellular response to nitrate(GO:0071249)
0.3 3.3 GO:0010167 response to nitrate(GO:0010167)
0.3 3.5 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.3 2.8 GO:0043173 nucleotide salvage(GO:0043173)
0.2 0.2 GO:0015740 C4-dicarboxylate transport(GO:0015740)
0.2 3.9 GO:2000032 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.2 1.9 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.2 1.2 GO:0071323 cellular response to chitin(GO:0071323)
0.2 3.6 GO:0045491 hemicellulose metabolic process(GO:0010410) xylan metabolic process(GO:0045491)
0.2 21.1 GO:0045490 pectin catabolic process(GO:0045490)
0.2 0.7 GO:0046416 D-amino acid metabolic process(GO:0046416)
0.2 6.9 GO:0006730 one-carbon metabolic process(GO:0006730)
0.2 5.8 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.2 0.9 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.2 0.7 GO:0015755 hexose transport(GO:0008645) fructose transport(GO:0015755) vacuolar transmembrane transport(GO:0034486)
0.2 4.2 GO:0031425 chloroplast RNA processing(GO:0031425)
0.2 1.4 GO:0010115 regulation of abscisic acid biosynthetic process(GO:0010115)
0.2 1.4 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.2 0.7 GO:0009071 serine family amino acid catabolic process(GO:0009071)
0.2 4.5 GO:0009638 phototropism(GO:0009638)
0.2 1.8 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.2 3.4 GO:0032365 intracellular lipid transport(GO:0032365)
0.2 0.7 GO:0070150 mitochondrial glycyl-tRNA aminoacylation(GO:0070150)
0.2 3.3 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.2 0.9 GO:1904356 regulation of telomere maintenance via telomerase(GO:0032210) regulation of telomere maintenance via telomere lengthening(GO:1904356) negative regulation of DNA biosynthetic process(GO:2000279)
0.2 0.7 GO:0010070 zygote asymmetric cell division(GO:0010070)
0.2 1.1 GO:0010587 miRNA catabolic process(GO:0010587)
0.2 1.5 GO:0046621 negative regulation of organ growth(GO:0046621)
0.2 1.5 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.2 0.6 GO:0001934 positive regulation of protein phosphorylation(GO:0001934)
0.2 0.6 GO:0035019 somatic stem cell population maintenance(GO:0035019)
0.2 1.9 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.2 1.5 GO:0051955 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.2 2.7 GO:0005987 sucrose catabolic process(GO:0005987)
0.2 9.4 GO:0010101 post-embryonic root morphogenesis(GO:0010101) lateral root morphogenesis(GO:0010102)
0.2 2.6 GO:0009704 de-etiolation(GO:0009704)
0.2 2.4 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.2 0.6 GO:1901998 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891) toxin transport(GO:1901998)
0.2 2.0 GO:0033619 membrane protein proteolysis(GO:0033619)
0.2 2.7 GO:0033674 positive regulation of kinase activity(GO:0033674)
0.2 1.8 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.2 1.2 GO:0016045 detection of bacterium(GO:0016045)
0.2 6.2 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.2 1.0 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.2 0.9 GO:0015939 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.2 1.9 GO:0006450 regulation of translational fidelity(GO:0006450)
0.2 0.6 GO:0007032 endosome organization(GO:0007032)
0.2 0.8 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.2 7.8 GO:0048825 cotyledon development(GO:0048825)
0.2 1.3 GO:0010233 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.2 1.1 GO:0051096 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.2 1.5 GO:0019856 pyrimidine nucleobase biosynthetic process(GO:0019856)
0.2 0.6 GO:0006883 cellular sodium ion homeostasis(GO:0006883) sodium ion homeostasis(GO:0055078)
0.2 0.6 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.2 0.9 GO:0006107 oxaloacetate metabolic process(GO:0006107)
0.2 2.6 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.2 0.9 GO:0019419 sulfate reduction(GO:0019419)
0.2 2.4 GO:0030488 tRNA methylation(GO:0030488)
0.2 0.4 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.2 0.9 GO:0010158 abaxial cell fate specification(GO:0010158)
0.2 0.2 GO:0007164 establishment of tissue polarity(GO:0007164)
0.2 10.6 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.2 1.4 GO:0000966 RNA 5'-end processing(GO:0000966)
0.2 0.7 GO:0048577 negative regulation of short-day photoperiodism, flowering(GO:0048577)
0.2 2.7 GO:0051346 negative regulation of hydrolase activity(GO:0051346)
0.2 2.1 GO:0006465 signal peptide processing(GO:0006465)
0.2 1.9 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.2 6.3 GO:0072596 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.2 1.2 GO:1905177 tracheary element differentiation(GO:1905177)
0.2 3.3 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.2 5.5 GO:0006414 translational elongation(GO:0006414)
0.2 2.5 GO:0010215 cellulose microfibril organization(GO:0010215)
0.2 0.3 GO:0032204 regulation of telomere maintenance(GO:0032204)
0.2 0.9 GO:0015689 molybdate ion transport(GO:0015689)
0.2 0.8 GO:0030322 stabilization of membrane potential(GO:0030322)
0.2 1.1 GO:0009957 epidermal cell fate specification(GO:0009957)
0.2 1.5 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.2 0.6 GO:0048480 style development(GO:0048479) stigma development(GO:0048480)
0.1 0.4 GO:0097298 regulation of nucleus size(GO:0097298)
0.1 0.7 GO:1903963 icosanoid secretion(GO:0032309) acid secretion(GO:0046717) arachidonic acid secretion(GO:0050482) icosanoid transport(GO:0071715) fatty acid derivative transport(GO:1901571) arachidonate transport(GO:1903963)
0.1 0.3 GO:0010343 singlet oxygen-mediated programmed cell death(GO:0010343)
0.1 4.0 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.1 0.1 GO:0010500 transmitting tissue development(GO:0010500)
0.1 1.0 GO:0006270 DNA replication initiation(GO:0006270)
0.1 1.2 GO:0010044 response to aluminum ion(GO:0010044)
0.1 4.4 GO:0048574 long-day photoperiodism, flowering(GO:0048574)
0.1 2.1 GO:1900865 chloroplast RNA modification(GO:1900865)
0.1 1.1 GO:0000272 polysaccharide catabolic process(GO:0000272)
0.1 1.2 GO:0044774 mitotic DNA integrity checkpoint(GO:0044774)
0.1 2.3 GO:0009959 negative gravitropism(GO:0009959)
0.1 9.1 GO:0006885 regulation of pH(GO:0006885)
0.1 0.8 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.1 0.9 GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0000079) regulation of cyclin-dependent protein kinase activity(GO:1904029)
0.1 2.7 GO:0009944 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.1 1.6 GO:0042726 flavin-containing compound metabolic process(GO:0042726)
0.1 3.3 GO:0010582 floral meristem determinacy(GO:0010582)
0.1 1.3 GO:0017182 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.1 0.5 GO:0090356 negative regulation of auxin metabolic process(GO:0090356)
0.1 5.7 GO:0009664 plant-type cell wall organization(GO:0009664)
0.1 0.6 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.1 8.8 GO:0043086 negative regulation of catalytic activity(GO:0043086)
0.1 3.1 GO:0006006 glucose metabolic process(GO:0006006)
0.1 0.4 GO:0009228 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.1 1.3 GO:0009396 folic acid-containing compound biosynthetic process(GO:0009396)
0.1 1.5 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.1 0.5 GO:1902533 positive regulation of intracellular signal transduction(GO:1902533)
0.1 0.9 GO:0008156 negative regulation of DNA replication(GO:0008156)
0.1 0.8 GO:0007021 tubulin complex assembly(GO:0007021)
0.1 0.6 GO:0000710 meiotic mismatch repair(GO:0000710)
0.1 0.3 GO:0080190 secondary growth(GO:0080117) lateral growth(GO:0080190)
0.1 1.2 GO:0009098 leucine biosynthetic process(GO:0009098)
0.1 0.2 GO:0046683 response to organophosphorus(GO:0046683)
0.1 1.1 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.1 0.5 GO:0006821 chloride transport(GO:0006821)
0.1 0.3 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.1 0.3 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.1 1.9 GO:0032543 mitochondrial translation(GO:0032543)
0.1 0.4 GO:0046068 cGMP biosynthetic process(GO:0006182) cGMP metabolic process(GO:0046068)
0.1 1.4 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.1 0.5 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.1 0.3 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.1 0.5 GO:0000727 double-strand break repair via break-induced replication(GO:0000727)
0.1 2.9 GO:0016126 sterol biosynthetic process(GO:0016126)
0.1 1.8 GO:0006722 triterpenoid metabolic process(GO:0006722)
0.1 0.3 GO:0006303 double-strand break repair via nonhomologous end joining(GO:0006303)
0.1 0.6 GO:0060429 epithelium development(GO:0060429)
0.1 0.6 GO:1990066 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.1 0.4 GO:0007043 cell-cell junction assembly(GO:0007043) cell junction assembly(GO:0034329)
0.1 0.4 GO:0010375 stomatal complex patterning(GO:0010375)
0.1 0.7 GO:0034502 protein localization to chromosome(GO:0034502)
0.1 1.0 GO:0036297 interstrand cross-link repair(GO:0036297)
0.1 0.7 GO:0007004 RNA-dependent DNA biosynthetic process(GO:0006278) telomere maintenance via telomerase(GO:0007004)
0.1 0.7 GO:0001709 cell fate determination(GO:0001709)
0.1 0.7 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.1 0.7 GO:1904666 regulation of ubiquitin protein ligase activity(GO:1904666) positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.1 0.2 GO:0030307 positive regulation of cell growth(GO:0030307)
0.1 0.3 GO:0007155 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.1 0.4 GO:0071585 detoxification of cadmium ion(GO:0071585)
0.1 0.2 GO:2000023 regulation of lateral root development(GO:2000023)
0.1 1.4 GO:2000008 regulation of protein localization to cell surface(GO:2000008)
0.1 0.3 GO:2000014 regulation of endosperm development(GO:2000014)
0.1 0.6 GO:0010165 response to X-ray(GO:0010165)
0.1 0.3 GO:0001932 regulation of protein phosphorylation(GO:0001932)
0.1 1.9 GO:0051644 chloroplast relocation(GO:0009902) chloroplast localization(GO:0019750) plastid localization(GO:0051644) establishment of plastid localization(GO:0051667)
0.1 1.2 GO:0009292 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.1 0.4 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.1 0.3 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.1 0.3 GO:0071031 nuclear mRNA surveillance of mRNA 3'-end processing(GO:0071031) CUT catabolic process(GO:0071034) CUT metabolic process(GO:0071043) nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription(GO:0071049)
0.1 1.2 GO:0032981 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.1 1.0 GO:0080022 primary root development(GO:0080022)
0.1 0.4 GO:0052192 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.1 0.7 GO:0048658 anther wall tapetum development(GO:0048658)
0.1 0.4 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.1 0.7 GO:2000762 regulation of phenylpropanoid metabolic process(GO:2000762)
0.1 0.2 GO:0030638 polyketide metabolic process(GO:0030638)
0.1 0.6 GO:0070475 rRNA base methylation(GO:0070475)
0.1 0.2 GO:0061087 positive regulation of histone H3-K27 methylation(GO:0061087)
0.1 4.3 GO:0009658 chloroplast organization(GO:0009658)
0.1 0.7 GO:0080060 integument development(GO:0080060)
0.1 1.4 GO:0006506 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.1 0.2 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.1 0.5 GO:0097354 protein prenylation(GO:0018342) prenylation(GO:0097354)
0.0 0.2 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.0 0.4 GO:0016925 protein sumoylation(GO:0016925)
0.0 0.4 GO:0080086 stamen filament development(GO:0080086)
0.0 0.5 GO:0010074 maintenance of meristem identity(GO:0010074)
0.0 2.1 GO:0000725 recombinational repair(GO:0000725)
0.0 0.2 GO:0010253 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.0 0.4 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.0 0.8 GO:0007062 sister chromatid cohesion(GO:0007062)
0.0 0.4 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.0 0.3 GO:0006528 asparagine metabolic process(GO:0006528) asparagine biosynthetic process(GO:0006529)
0.0 0.1 GO:0048451 petal formation(GO:0048451)
0.0 0.5 GO:0006265 DNA topological change(GO:0006265)
0.0 0.6 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0 0.2 GO:0080120 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.0 0.8 GO:0051225 spindle assembly(GO:0051225)
0.0 0.1 GO:0034724 DNA replication-independent nucleosome organization(GO:0034724)
0.0 0.9 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.9 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.7 GO:0006935 chemotaxis(GO:0006935) pollen tube guidance(GO:0010183) taxis(GO:0042330) positive chemotaxis(GO:0050918)
0.0 1.6 GO:0006906 vesicle fusion(GO:0006906)
0.0 0.1 GO:0034476 U1 snRNA 3'-end processing(GO:0034473) U5 snRNA 3'-end processing(GO:0034476) nuclear polyadenylation-dependent mRNA catabolic process(GO:0071042) polyadenylation-dependent mRNA catabolic process(GO:0071047)
0.0 0.2 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.0 0.1 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.0 0.3 GO:0071483 cellular response to blue light(GO:0071483)
0.0 0.9 GO:0048235 pollen sperm cell differentiation(GO:0048235)
0.0 0.2 GO:0051596 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.0 0.2 GO:0010050 vegetative phase change(GO:0010050)
0.0 0.5 GO:0031163 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.0 0.2 GO:0006415 translational termination(GO:0006415)
0.0 0.5 GO:0016556 mRNA modification(GO:0016556)
0.0 0.8 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.1 GO:0070898 RNA polymerase III transcriptional preinitiation complex assembly(GO:0070898)
0.0 0.8 GO:0006487 protein N-linked glycosylation(GO:0006487)
0.0 0.2 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.0 0.1 GO:0000973 posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000973)
0.0 1.0 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.1 GO:0048830 adventitious root development(GO:0048830)
0.0 0.0 GO:0018027 peptidyl-lysine dimethylation(GO:0018027)
0.0 0.3 GO:0009825 multidimensional cell growth(GO:0009825)
0.0 0.6 GO:0045292 mRNA cis splicing, via spliceosome(GO:0045292)
0.0 0.1 GO:0010358 leaf shaping(GO:0010358)
0.0 0.4 GO:0010075 regulation of meristem growth(GO:0010075)
0.0 0.1 GO:0006828 manganese ion transport(GO:0006828)
0.0 0.0 GO:0006435 threonyl-tRNA aminoacylation(GO:0006435)
0.0 0.1 GO:0043328 protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043328)
0.0 0.0 GO:0048598 embryonic morphogenesis(GO:0048598)
0.0 0.1 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.0 0.1 GO:0009303 rRNA transcription(GO:0009303)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
2.7 13.3 GO:0010007 magnesium chelatase complex(GO:0010007)
2.0 16.1 GO:0009538 photosystem I reaction center(GO:0009538)
1.5 6.0 GO:0031515 tRNA (m1A) methyltransferase complex(GO:0031515)
1.4 6.9 GO:0009503 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
1.3 44.3 GO:0009523 photosystem II(GO:0009523)
1.2 6.0 GO:0005960 glycine cleavage complex(GO:0005960)
1.2 34.3 GO:0031978 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
1.1 17.3 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
1.0 1.0 GO:0031897 Tic complex(GO:0031897)
1.0 3.8 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
0.8 8.4 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.8 4.2 GO:0009897 external side of plasma membrane(GO:0009897)
0.8 5.5 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.8 3.8 GO:0034426 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.7 2.9 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.7 2.8 GO:0010330 cellulose synthase complex(GO:0010330)
0.7 4.1 GO:0031209 SCAR complex(GO:0031209)
0.7 13.5 GO:0009574 preprophase band(GO:0009574)
0.6 7.0 GO:0000427 plastid-encoded plastid RNA polymerase complex(GO:0000427)
0.6 3.7 GO:0009346 citrate lyase complex(GO:0009346)
0.6 6.8 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.6 34.3 GO:0010287 plastoglobule(GO:0010287)
0.6 10.3 GO:0009531 secondary cell wall(GO:0009531)
0.6 2.3 GO:0005828 kinetochore microtubule(GO:0005828)
0.5 7.6 GO:0072686 mitotic spindle(GO:0072686)
0.5 0.5 GO:0035101 FACT complex(GO:0035101)
0.5 1.5 GO:0033281 TAT protein transport complex(GO:0033281)
0.5 2.3 GO:0005719 nuclear euchromatin(GO:0005719)
0.5 1.4 GO:0031261 DNA replication preinitiation complex(GO:0031261)
0.4 10.5 GO:0005871 kinesin complex(GO:0005871)
0.4 1.3 GO:0031390 Ctf18 RFC-like complex(GO:0031390)
0.4 1.3 GO:0009925 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.4 1.3 GO:0009521 photosystem(GO:0009521)
0.4 6.2 GO:0010319 stromule(GO:0010319)
0.4 114.0 GO:0009534 chloroplast thylakoid(GO:0009534)
0.4 2.0 GO:0009569 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.4 4.3 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.4 3.9 GO:0016272 prefoldin complex(GO:0016272)
0.4 1.9 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.4 15.2 GO:0009528 plastid inner membrane(GO:0009528)
0.3 1.0 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.3 4.8 GO:0005720 nuclear heterochromatin(GO:0005720)
0.3 3.7 GO:0055028 cortical microtubule(GO:0055028)
0.3 2.3 GO:0005664 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.3 3.1 GO:0042555 MCM complex(GO:0042555)
0.3 0.9 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.3 4.0 GO:0045298 tubulin complex(GO:0045298)
0.3 20.6 GO:0009579 thylakoid(GO:0009579)
0.3 46.6 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.3 6.9 GO:0016324 apical plasma membrane(GO:0016324)
0.3 1.1 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.3 0.8 GO:0005652 nuclear lamina(GO:0005652)
0.3 2.0 GO:0098576 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.3 2.2 GO:0051286 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.3 122.5 GO:0009532 plastid stroma(GO:0009532)
0.2 0.7 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.2 12.1 GO:0005874 microtubule(GO:0005874)
0.2 2.0 GO:0005662 DNA replication factor A complex(GO:0005662)
0.2 1.3 GO:0031082 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.2 0.8 GO:0032044 DSIF complex(GO:0032044)
0.2 11.3 GO:0005797 Golgi medial cisterna(GO:0005797)
0.2 30.3 GO:0009505 plant-type cell wall(GO:0009505)
0.2 0.4 GO:0009501 amyloplast(GO:0009501)
0.2 2.3 GO:0009986 cell surface(GO:0009986)
0.2 1.3 GO:0031298 replication fork protection complex(GO:0031298)
0.2 34.3 GO:0048046 apoplast(GO:0048046)
0.2 0.5 GO:0030896 checkpoint clamp complex(GO:0030896)
0.2 38.7 GO:0044434 chloroplast part(GO:0044434)
0.1 0.4 GO:0097361 CIA complex(GO:0097361)
0.1 1.3 GO:0032300 mismatch repair complex(GO:0032300)
0.1 1.2 GO:0010168 ER body(GO:0010168)
0.1 2.6 GO:0000419 DNA-directed RNA polymerase V complex(GO:0000419)
0.1 0.2 GO:0042788 polysomal ribosome(GO:0042788)
0.1 0.7 GO:0044545 NSL complex(GO:0044545)
0.1 16.3 GO:0015934 large ribosomal subunit(GO:0015934)
0.1 0.6 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.1 9.9 GO:0005887 integral component of plasma membrane(GO:0005887)
0.1 0.7 GO:0031012 extracellular matrix(GO:0031012)
0.1 2.2 GO:0005875 microtubule associated complex(GO:0005875)
0.1 0.5 GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.1 0.6 GO:0031379 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.1 0.5 GO:0005787 signal peptidase complex(GO:0005787)
0.1 195.2 GO:0005576 extracellular region(GO:0005576)
0.1 0.5 GO:0000778 condensed chromosome kinetochore(GO:0000777) condensed nuclear chromosome kinetochore(GO:0000778)
0.1 0.6 GO:0043073 germ cell nucleus(GO:0043073)
0.1 0.3 GO:0000783 telomere cap complex(GO:0000782) nuclear telomere cap complex(GO:0000783)
0.1 2.1 GO:0000152 nuclear ubiquitin ligase complex(GO:0000152)
0.1 7.1 GO:0022626 cytosolic ribosome(GO:0022626)
0.0 0.2 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.0 3.6 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.3 GO:0009360 DNA polymerase III complex(GO:0009360)
0.0 0.6 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 0.6 GO:0005657 replication fork(GO:0005657)
0.0 0.1 GO:0009527 plastid outer membrane(GO:0009527)
0.0 0.6 GO:0005685 U1 snRNP(GO:0005685)
0.0 0.2 GO:0005801 cis-Golgi network(GO:0005801)
0.0 1.4 GO:0031201 SNARE complex(GO:0031201)
0.0 0.4 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.0 0.1 GO:0000126 transcription factor TFIIIB complex(GO:0000126)
0.0 0.7 GO:0005811 lipid particle(GO:0005811)
0.0 0.1 GO:0044614 nuclear pore cytoplasmic filaments(GO:0044614)
0.0 0.2 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.0 0.0 GO:1990415 Pex17p-Pex14p docking complex(GO:1990415) peroxisomal importomer complex(GO:1990429)
0.0 0.3 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.7 8.0 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
2.6 7.8 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
2.4 14.4 GO:0051003 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
2.1 6.4 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
2.0 6.1 GO:0071771 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
2.0 6.0 GO:0016642 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
1.9 5.6 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
1.9 7.5 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
1.6 22.9 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
1.5 4.5 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
1.5 6.0 GO:0016429 tRNA (adenine-N1-)-methyltransferase activity(GO:0016429)
1.4 37.7 GO:0016168 chlorophyll binding(GO:0016168)
1.4 4.3 GO:0016728 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
1.4 5.4 GO:0070402 NADPH binding(GO:0070402)
1.3 5.3 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
1.3 3.9 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
1.3 3.9 GO:0005344 oxygen transporter activity(GO:0005344)
1.3 5.1 GO:0047158 sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity(GO:0047158)
1.3 3.8 GO:0009374 biotin binding(GO:0009374)
1.3 29.1 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
1.3 1.3 GO:0031409 pigment binding(GO:0031409)
1.2 3.7 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
1.2 6.9 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
1.1 2.3 GO:0019187 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
1.1 3.4 GO:0043425 bHLH transcription factor binding(GO:0043425)
1.1 14.1 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
1.1 4.3 GO:0019156 isoamylase activity(GO:0019156)
1.1 8.6 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
1.0 5.1 GO:0008184 glycogen phosphorylase activity(GO:0008184)
1.0 3.9 GO:0009885 transmembrane receptor histidine kinase activity(GO:0009784) transmembrane histidine kinase cytokinin receptor activity(GO:0009885)
1.0 7.8 GO:0019137 thioglucosidase activity(GO:0019137)
1.0 2.9 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.9 22.8 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.9 3.6 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.9 2.7 GO:0030941 chloroplast targeting sequence binding(GO:0030941)
0.9 4.3 GO:0016463 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.9 1.7 GO:0047912 galacturonokinase activity(GO:0047912)
0.8 6.6 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.8 4.1 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.8 3.2 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.8 3.2 GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.8 2.3 GO:0015087 cobalt ion transmembrane transporter activity(GO:0015087) nickel cation transmembrane transporter activity(GO:0015099)
0.8 9.2 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.7 2.2 GO:0004828 serine-tRNA ligase activity(GO:0004828)
0.7 7.4 GO:0004312 fatty acid synthase activity(GO:0004312)
0.7 1.5 GO:0004645 phosphorylase activity(GO:0004645)
0.7 8.8 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.7 2.9 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.7 23.0 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.7 7.8 GO:0003905 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.7 5.7 GO:0008083 growth factor activity(GO:0008083)
0.7 5.6 GO:0000996 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.7 3.5 GO:0004333 fumarate hydratase activity(GO:0004333)
0.7 2.0 GO:0004462 lactoylglutathione lyase activity(GO:0004462)
0.7 4.0 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.7 7.3 GO:0016161 beta-amylase activity(GO:0016161)
0.7 4.0 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.7 3.3 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.6 3.2 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.6 12.9 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.6 2.6 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.6 3.8 GO:0015288 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.6 3.2 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.6 3.7 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.6 1.9 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.6 15.4 GO:0004565 beta-galactosidase activity(GO:0004565)
0.6 3.7 GO:0003913 DNA photolyase activity(GO:0003913)
0.6 1.8 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.6 4.3 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.6 3.0 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.6 4.7 GO:0017116 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.6 4.6 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.6 1.7 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.6 6.1 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.5 3.3 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.5 3.2 GO:0051723 protein methylesterase activity(GO:0051723)
0.5 6.3 GO:0019104 DNA N-glycosylase activity(GO:0019104)
0.5 2.6 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.5 4.7 GO:0004845 uracil phosphoribosyltransferase activity(GO:0004845)
0.5 4.1 GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.5 2.5 GO:0035620 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.5 7.1 GO:0016872 intramolecular lyase activity(GO:0016872)
0.5 2.5 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.5 12.5 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.5 1.9 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.5 1.9 GO:0015245 fatty acid transporter activity(GO:0015245)
0.5 1.4 GO:0047560 3-dehydrosphinganine reductase activity(GO:0047560)
0.5 2.8 GO:0005230 ionotropic glutamate receptor activity(GO:0004970) extracellular ligand-gated ion channel activity(GO:0005230) transmitter-gated ion channel activity(GO:0022824) transmitter-gated channel activity(GO:0022835) neurotransmitter receptor activity(GO:0030594)
0.5 2.3 GO:0035197 siRNA binding(GO:0035197)
0.5 3.2 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.5 2.7 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.5 1.4 GO:0015173 aromatic amino acid transmembrane transporter activity(GO:0015173)
0.5 4.1 GO:0010428 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.4 12.0 GO:0008810 cellulase activity(GO:0008810)
0.4 1.8 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.4 6.9 GO:0008146 sulfotransferase activity(GO:0008146)
0.4 1.7 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.4 1.7 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.4 1.3 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.4 3.0 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.4 4.2 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.4 1.2 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.4 8.2 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.4 1.2 GO:0090422 thiamine pyrophosphate transporter activity(GO:0090422)
0.4 0.8 GO:0015925 galactosidase activity(GO:0015925)
0.4 1.2 GO:0080104 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.4 1.9 GO:0042084 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.4 2.7 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.4 3.0 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.4 2.6 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.4 1.5 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.4 1.1 GO:0005034 osmosensor activity(GO:0005034)
0.4 2.6 GO:0046030 inositol trisphosphate phosphatase activity(GO:0046030)
0.4 3.7 GO:0051920 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.4 1.8 GO:0004049 anthranilate synthase activity(GO:0004049)
0.4 1.5 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.4 2.5 GO:0008169 C-methyltransferase activity(GO:0008169)
0.4 26.4 GO:0003777 microtubule motor activity(GO:0003777)
0.4 3.9 GO:0015462 protein-transmembrane transporting ATPase activity(GO:0015462)
0.3 1.4 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.3 4.5 GO:0046556 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.3 2.4 GO:0034237 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.3 1.0 GO:0036310 annealing helicase activity(GO:0036310)
0.3 2.1 GO:0050017 L-3-cyanoalanine synthase activity(GO:0050017)
0.3 1.7 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.3 2.3 GO:0047714 galactolipase activity(GO:0047714)
0.3 3.3 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.3 19.6 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.3 2.9 GO:0070568 guanylyltransferase activity(GO:0070568)
0.3 2.2 GO:0005047 signal recognition particle binding(GO:0005047)
0.3 3.8 GO:0097599 xylanase activity(GO:0097599)
0.3 1.0 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.3 1.9 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.3 0.9 GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity(GO:0003864)
0.3 1.3 GO:0010285 L,L-diaminopimelate aminotransferase activity(GO:0010285)
0.3 4.4 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.3 3.7 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.3 1.5 GO:0010313 phytochrome binding(GO:0010313)
0.3 2.1 GO:0052852 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.3 1.2 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.3 0.9 GO:0034596 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.3 4.5 GO:0003688 DNA replication origin binding(GO:0003688)
0.3 3.3 GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.3 2.0 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.3 0.9 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.3 2.0 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.3 1.4 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.3 31.8 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.3 1.7 GO:0004567 beta-mannosidase activity(GO:0004567)
0.3 2.6 GO:0043495 protein anchor(GO:0043495)
0.3 0.8 GO:0019172 glyoxalase III activity(GO:0019172)
0.3 0.8 GO:0042392 sphingosine-1-phosphate phosphatase activity(GO:0042392) lipid phosphatase activity(GO:0042577)
0.3 1.9 GO:0019871 ion channel inhibitor activity(GO:0008200) channel inhibitor activity(GO:0016248) sodium channel regulator activity(GO:0017080) sodium channel inhibitor activity(GO:0019871)
0.3 1.1 GO:0042895 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.3 1.9 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.3 1.4 GO:0000150 recombinase activity(GO:0000150)
0.3 17.0 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.3 0.5 GO:0005315 inorganic phosphate transmembrane transporter activity(GO:0005315)
0.3 1.6 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.3 1.3 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.3 1.6 GO:0045431 flavonol synthase activity(GO:0045431)
0.3 1.3 GO:0004001 adenosine kinase activity(GO:0004001)
0.3 0.8 GO:0004353 glutamate dehydrogenase [NAD(P)+] activity(GO:0004353)
0.3 1.0 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.3 2.3 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.3 1.5 GO:0019904 protein domain specific binding(GO:0019904)
0.3 0.8 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.3 0.8 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.3 1.3 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.2 0.7 GO:0004072 aspartate kinase activity(GO:0004072)
0.2 11.9 GO:0016278 lysine N-methyltransferase activity(GO:0016278) protein-lysine N-methyltransferase activity(GO:0016279)
0.2 1.0 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.2 1.9 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.2 0.7 GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity(GO:0003848) dihydropteroate synthase activity(GO:0004156)
0.2 3.1 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.2 2.7 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.2 4.5 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.2 0.9 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.2 2.4 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.2 2.0 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.2 1.3 GO:0000400 four-way junction DNA binding(GO:0000400)
0.2 14.4 GO:0004650 polygalacturonase activity(GO:0004650)
0.2 1.1 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.2 0.6 GO:0005080 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
0.2 2.8 GO:0008028 monocarboxylic acid transmembrane transporter activity(GO:0008028)
0.2 0.8 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.2 6.2 GO:0008266 poly(U) RNA binding(GO:0008266)
0.2 2.7 GO:0030983 mismatched DNA binding(GO:0030983)
0.2 1.4 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.2 0.8 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.2 3.4 GO:0008138 protein tyrosine/serine/threonine phosphatase activity(GO:0008138)
0.2 2.6 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.2 0.8 GO:0000035 acyl binding(GO:0000035)
0.2 0.8 GO:0022840 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.2 1.8 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.2 0.6 GO:0004150 dihydroneopterin aldolase activity(GO:0004150)
0.2 2.3 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.2 2.9 GO:0004629 phospholipase C activity(GO:0004629)
0.2 1.9 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.2 1.2 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.2 1.9 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.2 0.8 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.2 0.6 GO:0019789 SUMO transferase activity(GO:0019789)
0.2 0.7 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.2 2.2 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.2 1.6 GO:1904680 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.2 0.7 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.2 13.8 GO:0008017 microtubule binding(GO:0008017)
0.2 3.4 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.2 1.4 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.2 0.7 GO:0016724 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.2 0.7 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.2 0.7 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.2 5.4 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.2 8.1 GO:0005451 monovalent cation:proton antiporter activity(GO:0005451)
0.2 1.9 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.2 7.2 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.2 6.7 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.1 2.0 GO:0019210 kinase inhibitor activity(GO:0019210)
0.1 1.0 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.1 1.3 GO:0008327 methyl-CpG binding(GO:0008327)
0.1 0.7 GO:0080146 L-cysteine desulfhydrase activity(GO:0080146)
0.1 1.4 GO:0050308 sugar-phosphatase activity(GO:0050308)
0.1 0.9 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.1 1.5 GO:0031127 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.1 0.4 GO:0000009 alpha-1,6-mannosyltransferase activity(GO:0000009)
0.1 2.4 GO:0080161 auxin transmembrane transporter activity(GO:0080161)
0.1 0.7 GO:0003680 AT DNA binding(GO:0003680)
0.1 1.4 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.1 0.5 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.1 1.3 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.1 1.0 GO:0015140 malate transmembrane transporter activity(GO:0015140)
0.1 1.9 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.1 1.1 GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters(GO:0016888)
0.1 0.8 GO:0003885 D-arabinono-1,4-lactone oxidase activity(GO:0003885)
0.1 1.1 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.1 3.8 GO:0008171 O-methyltransferase activity(GO:0008171)
0.1 0.5 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.1 0.4 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.1 5.8 GO:0043621 protein self-association(GO:0043621)
0.1 11.7 GO:0016741 transferase activity, transferring one-carbon groups(GO:0016741)
0.1 0.3 GO:0010521 telomerase inhibitor activity(GO:0010521)
0.1 3.0 GO:0009975 cyclase activity(GO:0009975)
0.1 0.6 GO:0051996 farnesyl-diphosphate farnesyltransferase activity(GO:0004310) squalene synthase activity(GO:0051996)
0.1 1.4 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.1 4.0 GO:0070001 aspartic-type peptidase activity(GO:0070001)
0.1 1.0 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.1 0.6 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.1 0.4 GO:0004075 biotin carboxylase activity(GO:0004075)
0.1 0.4 GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity(GO:0017176)
0.1 0.5 GO:0003985 acetyl-CoA C-acetyltransferase activity(GO:0003985) C-acetyltransferase activity(GO:0016453)
0.1 21.9 GO:0003735 structural constituent of ribosome(GO:0003735)
0.1 0.5 GO:0048487 beta-tubulin binding(GO:0048487)
0.1 0.6 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.1 0.8 GO:0033613 activating transcription factor binding(GO:0033613)
0.1 0.7 GO:0043047 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.1 0.2 GO:0004071 aspartate-ammonia ligase activity(GO:0004071)
0.1 0.9 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.1 1.4 GO:0019207 kinase regulator activity(GO:0019207)
0.1 3.4 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.1 1.6 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 0.8 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.1 0.6 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.1 1.0 GO:0031369 translation initiation factor binding(GO:0031369)
0.1 0.7 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.1 3.1 GO:0003697 single-stranded DNA binding(GO:0003697)
0.1 0.4 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.1 0.3 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.1 0.6 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.1 2.5 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 3.3 GO:0030247 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.1 0.2 GO:0050377 UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
0.1 10.6 GO:0043531 ADP binding(GO:0043531)
0.1 15.9 GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding(GO:0000981)
0.1 2.7 GO:0070008 serine-type carboxypeptidase activity(GO:0004185) serine-type exopeptidase activity(GO:0070008)
0.1 0.7 GO:0008375 acetylglucosaminyltransferase activity(GO:0008375)
0.1 0.2 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.0 0.2 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.0 0.1 GO:0000309 nicotinamide-nucleotide adenylyltransferase activity(GO:0000309)
0.0 1.1 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.0 0.4 GO:0045543 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.0 1.0 GO:0015926 glucosidase activity(GO:0015926)
0.0 0.8 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 0.7 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.0 0.4 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.0 1.7 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.2 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.0 0.2 GO:0005365 myo-inositol transmembrane transporter activity(GO:0005365) polyol transmembrane transporter activity(GO:0015166)
0.0 0.7 GO:0031559 lanosterol synthase activity(GO:0000250) oxidosqualene cyclase activity(GO:0031559)
0.0 1.4 GO:0016759 cellulose synthase activity(GO:0016759)
0.0 0.4 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.0 1.3 GO:0003678 DNA helicase activity(GO:0003678)
0.0 0.1 GO:0001016 polymerase III regulatory region sequence-specific DNA binding(GO:0000992) RNA polymerase III type 3 promoter sequence-specific DNA binding(GO:0001006) RNA polymerase III regulatory region DNA binding(GO:0001016) RNA polymerase III type 3 promoter DNA binding(GO:0001032)
0.0 2.4 GO:0004601 peroxidase activity(GO:0004601)
0.0 2.3 GO:0004857 enzyme inhibitor activity(GO:0004857)
0.0 0.1 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.0 1.3 GO:0003743 translation initiation factor activity(GO:0003743)
0.0 0.3 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0 0.1 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.0 0.6 GO:0051087 chaperone binding(GO:0051087)
0.0 0.3 GO:0008094 DNA-dependent ATPase activity(GO:0008094)
0.0 0.3 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 1.1 GO:0008134 transcription factor binding(GO:0008134)
0.0 0.2 GO:0008061 chitin binding(GO:0008061)
0.0 0.5 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 4.1 GO:0042802 identical protein binding(GO:0042802)
0.0 0.1 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.0 0.0 GO:0004829 threonine-tRNA ligase activity(GO:0004829)
0.0 1.4 GO:0009055 electron carrier activity(GO:0009055)
0.0 0.6 GO:0005484 SNAP receptor activity(GO:0005484)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
2.0 7.9 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
1.0 7.0 PID HES HEY PATHWAY Notch-mediated HES/HEY network
1.0 2.9 PID AURORA A PATHWAY Aurora A signaling
0.8 8.0 PID ATR PATHWAY ATR signaling pathway
0.6 1.1 PID P53 REGULATION PATHWAY p53 pathway
0.4 1.7 PID BCR 5PATHWAY BCR signaling pathway
0.4 4.1 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.3 1.3 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.3 1.9 PID IL8 CXCR2 PATHWAY IL8- and CXCR2-mediated signaling events
0.3 1.5 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.3 1.1 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.2 1.2 PID FANCONI PATHWAY Fanconi anemia pathway
0.2 0.9 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway
0.1 1.1 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
2.2 13.0 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
1.2 4.7 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
1.1 3.2 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.9 2.8 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.7 9.1 REACTOME ORC1 REMOVAL FROM CHROMATIN Genes involved in Orc1 removal from chromatin
0.6 1.9 REACTOME MHC CLASS II ANTIGEN PRESENTATION Genes involved in MHC class II antigen presentation
0.6 2.5 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.6 1.8 REACTOME GAB1 SIGNALOSOME Genes involved in GAB1 signalosome
0.5 2.3 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.4 1.3 REACTOME REGULATION OF HYPOXIA INDUCIBLE FACTOR HIF BY OXYGEN Genes involved in Regulation of Hypoxia-inducible Factor (HIF) by Oxygen
0.4 1.7 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.3 1.0 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.3 0.9 REACTOME SIGNALING BY TGF BETA RECEPTOR COMPLEX Genes involved in Signaling by TGF-beta Receptor Complex
0.2 1.2 REACTOME ACTIVATION OF THE PRE REPLICATIVE COMPLEX Genes involved in Activation of the pre-replicative complex
0.2 5.7 REACTOME PEPTIDE CHAIN ELONGATION Genes involved in Peptide chain elongation
0.2 1.8 REACTOME POST TRANSLATIONAL PROTEIN MODIFICATION Genes involved in Post-translational protein modification
0.2 2.0 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.2 0.6 REACTOME P130CAS LINKAGE TO MAPK SIGNALING FOR INTEGRINS Genes involved in p130Cas linkage to MAPK signaling for integrins
0.2 0.7 REACTOME INTEGRIN CELL SURFACE INTERACTIONS Genes involved in Integrin cell surface interactions
0.2 0.9 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.2 0.7 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.2 0.5 REACTOME FORMATION OF TUBULIN FOLDING INTERMEDIATES BY CCT TRIC Genes involved in Formation of tubulin folding intermediates by CCT/TriC
0.1 1.5 REACTOME MEIOTIC RECOMBINATION Genes involved in Meiotic Recombination
0.1 0.4 REACTOME P75 NTR RECEPTOR MEDIATED SIGNALLING Genes involved in p75 NTR receptor-mediated signalling
0.1 1.3 REACTOME DEVELOPMENTAL BIOLOGY Genes involved in Developmental Biology
0.1 0.3 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.0 0.3 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production