ISMARA results: CAGUGCA

Motif ID: CAGUGCA

Z-value: 0.382

Mature miRNA associated with seed CAGUGCA:

Name	miRBase Accession
hsa-miR-148a-3p	MIMAT0000243
hsa-miR-148b-3p	MIMAT0000759
hsa-miR-152-3p	MIMAT0000438

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Top targets:

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Showing 1 to 20 of 200 entries

Promoter	Score	Refseq	Gene Symbol	Gene Name
chr9_-_89562104	0.442	ENST00000298743.7	GAS1	growth arrest-specific 1
chrX_+_150151752	0.385	ENST00000325307.7	HMGB3	high mobility group box 3
chr11_+_109964087	0.285	ENST00000278590.3	ZC3H12C	zinc finger CCCH-type containing 12C
chr11_+_113930291	0.279	ENST00000335953.4	ZBTB16	zinc finger and BTB domain containing 16
chr1_+_218519577	0.279	ENST00000366930.4 ENST00000366929.4	TGFB2	transforming growth factor, beta 2
chr16_+_58059470	0.264	ENST00000219271.3	MMP15	matrix metallopeptidase 15 (membrane-inserted)
chr4_-_139163491	0.255	ENST00000280612.5	SLC7A11	solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
chr1_-_46598284	0.248	ENST00000423209.1 ENST00000262741.5	PIK3R3	phosphoinositide-3-kinase, regulatory subunit 3 (gamma)
chr4_-_23891693	0.246	ENST00000264867.2	PPARGC1A	peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
chr20_-_39317868	0.205	ENST00000373313.2	MAFB	v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B
chr17_-_53499310	0.204	ENST00000262065.3	MMD	monocyte to macrophage differentiation-associated
chr17_-_1532106	0.193	ENST00000301335.5 ENST00000382147.4	SLC43A2	solute carrier family 43 (amino acid system L transporter), member 2
chr9_+_116638562	0.193	ENST00000374126.5 ENST00000288466.7	ZNF618	zinc finger protein 618
chr21_-_44846999	0.189	ENST00000270162.6	SIK1	salt-inducible kinase 1
chr16_+_11762270	0.186	ENST00000329565.5	SNN	stannin
chr3_+_69812877	0.170	ENST00000457080.1 ENST00000328528.6	MITF	microphthalmia-associated transcription factor
chr5_+_78532003	0.165	ENST00000396137.4	JMY	junction mediating and regulatory protein, p53 cofactor
chr2_-_24583168	0.163	ENST00000361999.3	ITSN2	intersectin 2
chr9_-_110251836	0.154	ENST00000374672.4	KLF4	Kruppel-like factor 4 (gut)
chr17_-_7232585	0.153	ENST00000571887.1 ENST00000315614.7 ENST00000399464.2 ENST00000570460.1	NEURL4	neuralized E3 ubiquitin protein ligase 4

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

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Showing 1 to 20 of 37 entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.4	GO:0060628	regulation of ER to Golgi vesicle-mediated transport(GO:0060628)
0.1	0.3	GO:1902256	apoptotic process involved in outflow tract morphogenesis(GO:0003275) negative regulation of alkaline phosphatase activity(GO:0010693) uterine wall breakdown(GO:0042704) positive regulation of catagen(GO:0051795) regulation of apoptotic process involved in outflow tract morphogenesis(GO:1902256)
0.1	0.3	GO:0051138	positive regulation of NK T cell differentiation(GO:0051138)
0.0	0.3	GO:0089711	L-glutamate transmembrane transport(GO:0089711)
0.1	0.2	GO:1901860	positive regulation of mitochondrial DNA metabolic process(GO:1901860)
0.1	0.2	GO:0035283	rhombomere 5 development(GO:0021571) central nervous system segmentation(GO:0035283) brain segmentation(GO:0035284)
0.1	0.2	GO:0014740	negative regulation of muscle hyperplasia(GO:0014740)
0.0	0.2	GO:0032792	negative regulation of CREB transcription factor activity(GO:0032792)
0.0	0.2	GO:0070358	actin polymerization-dependent cell motility(GO:0070358)
0.0	0.2	GO:0014807	regulation of somitogenesis(GO:0014807)
0.0	0.1	GO:0021823	cerebral cortex tangential migration using cell-cell interactions(GO:0021823) postnatal olfactory bulb interneuron migration(GO:0021827) chemorepulsion involved in postnatal olfactory bulb interneuron migration(GO:0021836)
0.0	0.1	GO:0033634	positive regulation of cell-cell adhesion mediated by integrin(GO:0033634)
0.0	0.1	GO:0042271	susceptibility to natural killer cell mediated cytotoxicity(GO:0042271)
0.0	0.1	GO:0032877	positive regulation of DNA endoreduplication(GO:0032877) negative regulation of transcription involved in G1/S transition of mitotic cell cycle(GO:0071930)
0.0	0.1	GO:2000097	chronological cell aging(GO:0001300) regulation of smooth muscle cell-matrix adhesion(GO:2000097)
0.0	0.1	GO:0006679	glucosylceramide biosynthetic process(GO:0006679)
0.0	0.1	GO:0007206	phospholipase C-activating G-protein coupled glutamate receptor signaling pathway(GO:0007206)
0.0	0.1	GO:0060708	spongiotrophoblast differentiation(GO:0060708)
0.0	0.1	GO:0098907	protein localization to M-band(GO:0036309) regulation of SA node cell action potential(GO:0098907)
0.0	0.1	GO:0043129	surfactant homeostasis(GO:0043129)

Gene overrepresentation in cellular_component category:

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Showing 1 to 9 of 9 entries

Total log-likelihood	Term	Description
0.2	GO:0016461	unconventional myosin complex(GO:0016461)
0.1	GO:0034657	GID complex(GO:0034657)
0.1	GO:1990796	photoreceptor cell terminal bouton(GO:1990796)
0.1	GO:0016938	kinesin I complex(GO:0016938)
0.1	GO:0033263	CORVET complex(GO:0033263)
0.1	GO:0036056	filtration diaphragm(GO:0036056) slit diaphragm(GO:0036057)
0.1	GO:0070776	H3 histone acetyltransferase complex(GO:0070775) MOZ/MORF histone acetyltransferase complex(GO:0070776)
0.0	GO:0034686	integrin alphav-beta8 complex(GO:0034686)
0.0	GO:0035068	micro-ribonucleoprotein complex(GO:0035068)

Gene overrepresentation in molecular_function category:

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Showing 1 to 20 of 24 entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.4	GO:0035014	phosphatidylinositol 3-kinase regulator activity(GO:0035014)
0.0	0.4	GO:0000400	four-way junction DNA binding(GO:0000400)
0.1	0.3	GO:0034714	type III transforming growth factor beta receptor binding(GO:0034714)
0.1	0.3	GO:0005294	neutral L-amino acid secondary active transmembrane transporter activity(GO:0005294)
0.0	0.3	GO:0042975	peroxisome proliferator activated receptor binding(GO:0042975)
0.0	0.2	GO:0001206	transcriptional repressor activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001206)
0.0	0.2	GO:0071933	Arp2/3 complex binding(GO:0071933)
0.0	0.2	GO:0052629	phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0	0.2	GO:0008140	cAMP response element binding protein binding(GO:0008140)
0.0	0.1	GO:0015091	ferric iron transmembrane transporter activity(GO:0015091) trivalent inorganic cation transmembrane transporter activity(GO:0072510)
0.0	0.1	GO:0004740	pyruvate dehydrogenase (acetyl-transferring) kinase activity(GO:0004740)
0.0	0.1	GO:0047389	glycerophosphocholine phosphodiesterase activity(GO:0047389)
0.0	0.1	GO:0010484	H3 histone acetyltransferase activity(GO:0010484)
0.0	0.1	GO:0004525	ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0	0.1	GO:0034188	apolipoprotein A-I receptor activity(GO:0034188) phosphatidylserine-translocating ATPase activity(GO:0090556)
0.0	0.1	GO:0004095	carnitine O-palmitoyltransferase activity(GO:0004095)
0.0	0.1	GO:0030151	molybdenum ion binding(GO:0030151)
0.0	0.1	GO:0030144	alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity(GO:0030144)
0.0	0.1	GO:0008046	axon guidance receptor activity(GO:0008046)
0.0	0.1	GO:0003831	beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity(GO:0003831)

Gene overrepresentation in C2:CP category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.7	PID_HEDGEHOG_2PATHWAY	Signaling events mediated by the Hedgehog family

Gene overrepresentation in C2:CP:REACTOME category:

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Showing 1 to 2 of 2 entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.4	REACTOME_RORA_ACTIVATES_CIRCADIAN_EXPRESSION	Genes involved in RORA Activates Circadian Expression
0.0	0.2	REACTOME_IL_7_SIGNALING	Genes involved in Interleukin-7 signaling