ISMARA results: CCAGUGU

Motif ID: CCAGUGU

Z-value: 0.424

Mature miRNA associated with seed CCAGUGU:

Name	miRBase Accession
hsa-miR-199a-5p	MIMAT0000231
hsa-miR-199b-5p	MIMAT0000263

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Showing 1 to 20 of 200 entries

Promoter	Score	Refseq	Gene Symbol	Gene Name
chr7_-_131241361	0.919	ENST00000378555.3 ENST00000322985.9 ENST00000541194.1 ENST00000537928.1	PODXL	podocalyxin-like
chrY_+_15016725	0.808	ENST00000336079.3	DDX3Y	DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
chr2_-_19558373	0.567	ENST00000272223.2	OSR1	odd-skipped related transciption factor 1
chr14_+_67999999	0.513	ENST00000329153.5	PLEKHH1	pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
chr14_+_105267250	0.439	ENST00000342537.7	ZBTB42	zinc finger and BTB domain containing 42
chr3_+_186648274	0.420	ENST00000169298.3	ST6GAL1	ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
chr9_-_3525968	0.392	ENST00000382004.3 ENST00000302303.1 ENST00000449190.1	RFX3	regulatory factor X, 3 (influences HLA class II expression)
chr18_-_74207146	0.374	ENST00000443185.2	ZNF516	zinc finger protein 516
chr19_+_45312347	0.323	ENST00000270233.6 ENST00000591520.1	BCAM	basal cell adhesion molecule (Lutheran blood group)
chr4_+_55524085	0.318	ENST00000412167.2 ENST00000288135.5	KIT	v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
chr14_-_91884115	0.314	ENST00000389857.6	CCDC88C	coiled-coil domain containing 88C
chr11_-_79151695	0.292	ENST00000278550.7	TENM4	teneurin transmembrane protein 4
chr6_+_17281573	0.290	ENST00000379052.5	RBM24	RNA binding motif protein 24
chr20_+_48429356	0.285	ENST00000361573.2 ENST00000541138.1 ENST00000539601.1	SLC9A8	solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8
chr3_+_160473996	0.277	ENST00000498165.1	PPM1L	protein phosphatase, Mg2+/Mn2+ dependent, 1L
chr4_-_23891693	0.268	ENST00000264867.2	PPARGC1A	peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
chr8_+_37553261	0.264	ENST00000331569.4	ZNF703	zinc finger protein 703
chr2_+_191273052	0.259	ENST00000417958.1 ENST00000432036.1 ENST00000392328.1	MFSD6	major facilitator superfamily domain containing 6
chr20_+_19193269	0.247	ENST00000328041.6	SLC24A3	solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
chr3_-_114790179	0.241	ENST00000462705.1	ZBTB20	zinc finger and BTB domain containing 20

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

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Showing 1 to 20 of 49 entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	0.9	GO:0033634	positive regulation of cell-cell adhesion mediated by integrin(GO:0033634)
0.0	0.7	GO:0010501	RNA secondary structure unwinding(GO:0010501)
0.2	0.6	GO:0072186	metanephric cap development(GO:0072185) metanephric cap morphogenesis(GO:0072186) metanephric cap mesenchymal cell proliferation involved in metanephros development(GO:0090094)
0.1	0.4	GO:0002071	glandular epithelial cell maturation(GO:0002071) type B pancreatic cell maturation(GO:0072560)
0.0	0.4	GO:0006054	N-acetylneuraminate metabolic process(GO:0006054)
0.1	0.3	GO:0038162	erythropoietin-mediated signaling pathway(GO:0038162)
0.1	0.3	GO:0032289	central nervous system myelin formation(GO:0032289)
0.1	0.3	GO:1901860	positive regulation of mitochondrial DNA metabolic process(GO:1901860)
0.1	0.3	GO:0035905	ascending aorta development(GO:0035905) ascending aorta morphogenesis(GO:0035910)
0.0	0.3	GO:0033601	positive regulation of mammary gland epithelial cell proliferation(GO:0033601)
0.0	0.3	GO:1990118	sodium ion import across plasma membrane(GO:0098719) sodium ion import into cell(GO:1990118)
0.1	0.2	GO:0051097	negative regulation of helicase activity(GO:0051097)
0.1	0.2	GO:1900169	regulation of glucocorticoid mediated signaling pathway(GO:1900169)
0.1	0.2	GO:0098582	innate vocalization behavior(GO:0098582)
0.1	0.2	GO:0072053	renal inner medulla development(GO:0072053) renal outer medulla development(GO:0072054) inner medullary collecting duct development(GO:0072061)
0.1	0.2	GO:1905246	regulation of choline O-acetyltransferase activity(GO:1902769) positive regulation of choline O-acetyltransferase activity(GO:1902771) negative regulation of tau-protein kinase activity(GO:1902948) positive regulation of early endosome to recycling endosome transport(GO:1902955) negative regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process(GO:1902960) negative regulation of neurofibrillary tangle assembly(GO:1902997) negative regulation of aspartic-type peptidase activity(GO:1905246)
0.0	0.2	GO:0072658	maintenance of protein location in membrane(GO:0072658) maintenance of protein location in plasma membrane(GO:0072660) positive regulation of membrane depolarization during cardiac muscle cell action potential(GO:1900827)
0.0	0.2	GO:0072367	regulation of lipid transport by regulation of transcription from RNA polymerase II promoter(GO:0072367)
0.0	0.2	GO:0086024	adrenergic receptor signaling pathway involved in positive regulation of heart rate(GO:0086024)
0.0	0.1	GO:0021577	hindbrain structural organization(GO:0021577) cerebellum structural organization(GO:0021589)

Gene overrepresentation in cellular_component category:

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Showing 1 to 14 of 14 entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.9	GO:0036056	filtration diaphragm(GO:0036056) slit diaphragm(GO:0036057)
0.0	0.3	GO:0097440	apical dendrite(GO:0097440)
0.0	0.2	GO:0033553	rDNA heterochromatin(GO:0033553)
0.0	0.2	GO:0005641	nuclear envelope lumen(GO:0005641)
0.0	0.1	GO:0031251	PAN complex(GO:0031251)
0.0	0.1	GO:0031302	intrinsic component of endosome membrane(GO:0031302)
0.0	0.1	GO:0031213	RSF complex(GO:0031213)
0.0	0.1	GO:0019034	viral replication complex(GO:0019034)
0.0	0.1	GO:1990604	IRE1-TRAF2-ASK1 complex(GO:1990604)
0.0	0.1	GO:0044614	nuclear pore cytoplasmic filaments(GO:0044614)
0.0	0.1	GO:0032584	growth cone membrane(GO:0032584)
0.0	0.1	GO:0034673	inhibin-betaglycan-ActRII complex(GO:0034673)
0.0	0.1	GO:0005797	Golgi medial cisterna(GO:0005797)
0.0	0.0	GO:0034751	aryl hydrocarbon receptor complex(GO:0034751)

Gene overrepresentation in molecular_function category:

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Showing 1 to 20 of 22 entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.4	GO:0003835	beta-galactoside alpha-2,6-sialyltransferase activity(GO:0003835)
0.0	0.4	GO:0004716	receptor signaling protein tyrosine kinase activity(GO:0004716)
0.0	0.3	GO:0015386	potassium:proton antiporter activity(GO:0015386)
0.0	0.3	GO:0042975	peroxisome proliferator activated receptor binding(GO:0042975)
0.1	0.2	GO:0043398	HLH domain binding(GO:0043398)
0.0	0.2	GO:0031698	beta-2 adrenergic receptor binding(GO:0031698)
0.0	0.1	GO:0090541	MIT domain binding(GO:0090541)
0.0	0.1	GO:0098626	methylselenol reductase activity(GO:0098625) methylseleninic acid reductase activity(GO:0098626)
0.0	0.1	GO:0008798	beta-aspartyl-peptidase activity(GO:0008798)
0.0	0.1	GO:0034714	type III transforming growth factor beta receptor binding(GO:0034714)
0.0	0.1	GO:0008969	phosphohistidine phosphatase activity(GO:0008969)
0.0	0.1	GO:1990189	peptide-serine-N-acetyltransferase activity(GO:1990189)
0.0	0.1	GO:0005462	UDP-N-acetylglucosamine transmembrane transporter activity(GO:0005462)
0.0	0.1	GO:0015350	methotrexate transporter activity(GO:0015350)
0.0	0.1	GO:0008109	N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity(GO:0008109)
0.0	0.1	GO:0008273	calcium, potassium:sodium antiporter activity(GO:0008273)
0.0	0.1	GO:0000182	rDNA binding(GO:0000182)
0.0	0.1	GO:0072320	volume-sensitive chloride channel activity(GO:0072320)
0.0	0.1	GO:0017002	activin-activated receptor activity(GO:0017002)
0.0	0.1	GO:0004430	1-phosphatidylinositol 4-kinase activity(GO:0004430)

Gene overrepresentation in C2:CP category:

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Showing 1 to 1 of 1 entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.5	PID_HDAC_CLASSIII_PATHWAY	Signaling events mediated by HDAC Class III

Gene overrepresentation in C2:CP:REACTOME category:

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Showing 1 to 3 of 3 entries

Total log-likelihood	Term	Description
0.4	REACTOME_N_GLYCAN_ANTENNAE_ELONGATION	Genes involved in N-Glycan antennae elongation
0.4	REACTOME_CIRCADIAN_REPRESSION_OF_EXPRESSION_BY_REV_ERBA	Genes involved in Circadian Repression of Expression by REV-ERBA
0.1	REACTOME_N_GLYCAN_ANTENNAE_ELONGATION_IN_THE_MEDIAL_TRANS_GOLGI	Genes involved in N-glycan antennae elongation in the medial/trans-Golgi