Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)
ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.
Motif name | Z-value | Associated genes | Profile | Logo |
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RFX3_RFX2 | 14.13 |
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RFX7_RFX4_RFX1 | 10.66 |
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YBX1_FOS_NFYC_NFYA_NFYB_CEBPZ | 4.56 |
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E2F7_E2F1 | 3.39 |
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PLAGL1 | 3.14 |
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IRF2_STAT2_IRF8_IRF1 | 3.09 |
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NRF1 | 2.94 |
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WRNIP1 | 2.78 |
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TAF1 | 2.69 |
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ID4_TCF4_SNAI2 | 2.62 |
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In order to use ARMADA for infering putative regulatory networks from timecourse data, please set for every sample a timepoint, gap from previous timepoint and replicate. If you have only one replicate per sample you can leave replicate field unset.