ISMARA results: ACCCGUA

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Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)

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Results for ACCCGUA

Z-value: 0.05

Motif logo

miRNA associated with seed ACCCGUA

Name	miRBASE accession
hsa-miR-100-5p miRBase	MIMAT0000098
hsa-miR-99a-5p miRBase	MIMAT0000097
hsa-miR-99b-5p miRBase	MIMAT0000689

Activity profile of ACCCGUA motif

Sorted Z-values of ACCCGUA motif

Network of associatons between targets according to the STRING database.

First level regulatory network of ACCCGUA

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Promoter	Score	Transcript	Gene	Gene Info
chr7_-_27095972 Show fit	0.06	ENST00000355633.5 ENST00000643460.2	HOXA1 Ensembl NCBI GeneCards UniProt Show fit	homeobox A1
chr2_-_72147819 Show fit	0.05	ENST00000001146.7 ENST00000546307.5 ENST00000474509.1	CYP26B1 Ensembl NCBI GeneCards UniProt Show fit	cytochrome P450 family 26 subfamily B member 1
chr2_+_9961165 Show fit	0.02	ENST00000405379.6	GRHL1 Ensembl NCBI GeneCards UniProt Show fit	grainyhead like transcription factor 1
chr16_-_80804581 Show fit	0.01	ENST00000570137.7	CDYL2 Ensembl NCBI GeneCards UniProt Show fit	chromodomain Y like 2
chr2_+_33436304 Show fit	0.01	ENST00000402538.7	RASGRP3 Ensembl NCBI GeneCards UniProt Show fit	RAS guanyl releasing protein 3
chr8_+_125430333 Show fit	0.01	ENST00000311922.4	TRIB1 Ensembl NCBI GeneCards UniProt Show fit	tribbles pseudokinase 1
chr4_-_101347471 Show fit	0.01	ENST00000323055.10 ENST00000512215.5	PPP3CA Ensembl NCBI GeneCards UniProt Show fit	protein phosphatase 3 catalytic subunit alpha
chr12_+_50085325 Show fit	0.01	ENST00000551966.5 ENST00000550477.5 ENST00000394963.9	SMARCD1 Ensembl NCBI GeneCards UniProt Show fit	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
chr22_+_29883158 Show fit	0.00	ENST00000333027.7 ENST00000401950.7 ENST00000445401.5 ENST00000323630.9 ENST00000351488.7	MTMR3 Ensembl NCBI GeneCards UniProt Show fit	myotubularin related protein 3
chr2_-_207769889 Show fit	0.00	ENST00000295417.4	FZD5 Ensembl NCBI GeneCards UniProt Show fit	frizzled class receptor 5

Showing 1 to 10 of 20 entries

Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0034653	diterpenoid catabolic process(GO:0016103) retinoic acid catabolic process(GO:0034653) regulation of skeletal muscle fiber differentiation(GO:1902809)

Showing 1 to 1 of 1 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0008401	retinoic acid 4-hydroxylase activity(GO:0008401)

Showing 1 to 1 of 1 entries

Results for ACCCGUA

Z-value: 0.05

Motif logo

miRNA associated with seed ACCCGUA

Activity profile of ACCCGUA motif

Sorted Z-values of ACCCGUA motif

Network of associatons between targets according to the STRING database.

First level regulatory network of ACCCGUA

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Top targets:

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in molecular function category: