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Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)

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Results for ACUGGCC

Z-value: 0.31

Motif logo

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miRNA associated with seed ACUGGCC

NamemiRBASE accession
hsa-miR-193a-3p
MIMAT0000459
hsa-miR-193b-3p
MIMAT0002819

Activity profile of ACUGGCC motif

Sorted Z-values of ACUGGCC motif

Network of associatons between targets according to the STRING database.

First level regulatory network of ACUGGCC

PNG image of the network

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Top targets:

Promoter Score Transcript Gene Gene Info
chr6_-_29559724 1.07 ENST00000377050.5
UBD
ubiquitin D
chr4_+_54657918 1.07 ENST00000412167.6
ENST00000288135.6
KIT
KIT proto-oncogene, receptor tyrosine kinase
chr17_+_70169516 0.76 ENST00000243457.4
KCNJ2
potassium inwardly rectifying channel subfamily J member 2
chr22_-_39152622 0.65 ENST00000216133.10
CBX7
chromobox 7
chr2_-_216695540 0.62 ENST00000233813.5
IGFBP5
insulin like growth factor binding protein 5
chr1_+_183636065 0.57 ENST00000304685.8
RGL1
ral guanine nucleotide dissociation stimulator like 1
chr9_-_3525968 0.54 ENST00000382004.7
ENST00000617270.5
ENST00000449190.5
RFX3
regulatory factor X3
chr2_+_85753984 0.45 ENST00000306279.4
ATOH8
atonal bHLH transcription factor 8
chr20_-_5001474 0.45 ENST00000338244.6
SLC23A2
solute carrier family 23 member 2
chr2_-_212538766 0.38 ENST00000342788.9
ERBB4
erb-b2 receptor tyrosine kinase 4
chr1_-_91886144 0.37 ENST00000212355.9
TGFBR3
transforming growth factor beta receptor 3
chr18_-_55588184 0.35 ENST00000354452.8
ENST00000565908.6
ENST00000635822.2
TCF4
transcription factor 4
chr17_+_57256514 0.34 ENST00000284073.7
ENST00000674964.1
MSI2
musashi RNA binding protein 2
chr2_+_28981295 0.32 ENST00000379558.5
TOGARAM2
TOG array regulator of axonemal microtubules 2
chr5_-_124744513 0.32 ENST00000504926.5
ZNF608
zinc finger protein 608
chr1_+_218345326 0.32 ENST00000366930.9
TGFB2
transforming growth factor beta 2
chr15_-_61229297 0.26 ENST00000335670.11
RORA
RAR related orphan receptor A
chr2_+_12716893 0.26 ENST00000381465.2
ENST00000155926.9
TRIB2
tribbles pseudokinase 2
chr10_-_60389833 0.24 ENST00000280772.7
ANK3
ankyrin 3
chr15_+_44427591 0.22 ENST00000558791.5
ENST00000260327.9
CTDSPL2
CTD small phosphatase like 2
chr10_-_98268186 0.21 ENST00000260702.4
LOXL4
lysyl oxidase like 4
chr12_-_49903853 0.20 ENST00000320634.8
FAIM2
Fas apoptotic inhibitory molecule 2
chr9_+_36136416 0.19 ENST00000396613.7
GLIPR2
GLI pathogenesis related 2
chr9_-_37465402 0.18 ENST00000307750.5
ZBTB5
zinc finger and BTB domain containing 5
chr6_+_39792993 0.17 ENST00000538976.5
DAAM2
dishevelled associated activator of morphogenesis 2
chr5_-_134176920 0.16 ENST00000521216.5
ENST00000353411.11
ENST00000522855.5
ENST00000328392.10
ENST00000519321.5
SKP1
S-phase kinase associated protein 1
chr10_+_68721207 0.15 ENST00000538031.5
ENST00000543719.5
ENST00000539539.5
ENST00000265872.11
ENST00000543225.5
ENST00000536012.5
ENST00000494903.2
CCAR1
cell division cycle and apoptosis regulator 1
chr2_+_241702027 0.14 ENST00000313552.11
ENST00000406941.5
ING5
inhibitor of growth family member 5
chr4_-_23890035 0.14 ENST00000507380.1
ENST00000264867.7
PPARGC1A
PPARG coactivator 1 alpha
chr11_+_118436464 0.14 ENST00000389506.10
ENST00000534358.8
ENST00000531904.6
ENST00000649699.1
KMT2A
lysine methyltransferase 2A
chr8_-_144605699 0.13 ENST00000377307.6
ENST00000276826.5
ARHGAP39
Rho GTPase activating protein 39
chr2_+_14632688 0.13 ENST00000331243.4
ENST00000295092.3
LRATD1
LRAT domain containing 1
chrX_-_24027186 0.13 ENST00000328046.8
KLHL15
kelch like family member 15
chr6_-_165662100 0.13 ENST00000366882.6
PDE10A
phosphodiesterase 10A
chr11_-_62727444 0.13 ENST00000301785.7
HNRNPUL2
heterogeneous nuclear ribonucleoprotein U like 2
chr10_-_100519829 0.12 ENST00000370345.8
SEC31B
SEC31 homolog B, COPII coat complex component
chr17_-_29294141 0.12 ENST00000225388.9
NUFIP2
nuclear FMR1 interacting protein 2
chr1_-_169893876 0.12 ENST00000367771.11
ENST00000367772.8
SCYL3
SCY1 like pseudokinase 3
chr8_+_109540075 0.11 ENST00000614147.1
ENST00000337573.10
EBAG9
estrogen receptor binding site associated antigen 9
chr2_+_105337515 0.11 ENST00000410049.1
ENST00000258457.7
C2orf49
chromosome 2 open reading frame 49
chr20_+_43457885 0.11 ENST00000668808.1
ENST00000670741.1
ENST00000662078.1
ENST00000244020.5
ENST00000657241.1
SRSF6
ENSG00000288000.1
serine and arginine rich splicing factor 6
novel protein
chr19_+_32675835 0.10 ENST00000334176.4
RGS9BP
regulator of G protein signaling 9 binding protein
chr11_-_77820706 0.10 ENST00000440064.2
ENST00000528095.5
ENST00000308488.11
RSF1
remodeling and spacing factor 1
chr16_-_4116403 0.10 ENST00000294016.8
ADCY9
adenylate cyclase 9
chr12_+_11649666 0.10 ENST00000396373.9
ETV6
ETS variant transcription factor 6
chr12_+_459925 0.09 ENST00000266383.10
B4GALNT3
beta-1,4-N-acetyl-galactosaminyltransferase 3
chr4_-_104494882 0.09 ENST00000394767.3
CXXC4
CXXC finger protein 4
chr14_+_90397019 0.09 ENST00000447653.8
ENST00000356978.9
ENST00000626705.2
CALM1
calmodulin 1
chr17_+_63622406 0.08 ENST00000579585.5
ENST00000361733.8
ENST00000584573.5
ENST00000361357.7
MAP3K3
mitogen-activated protein kinase kinase kinase 3
chr9_+_113221528 0.08 ENST00000374212.5
SLC31A1
solute carrier family 31 member 1
chr6_-_47309898 0.08 ENST00000296861.2
TNFRSF21
TNF receptor superfamily member 21
chr1_+_111449442 0.08 ENST00000369722.8
ENST00000483994.1
ATP5PB
ATP synthase peripheral stalk-membrane subunit b
chr12_+_109999422 0.08 ENST00000261739.9
ANKRD13A
ankyrin repeat domain 13A
chr22_+_24270776 0.07 ENST00000437398.5
ENST00000421374.5
ENST00000314328.14
ENST00000651059.1
ENST00000541492.1
SPECC1L
sperm antigen with calponin homology and coiled-coil domains 1 like
chr8_-_56211257 0.07 ENST00000316981.8
ENST00000423799.6
ENST00000429357.2
PLAG1
PLAG1 zinc finger
chr14_-_77028663 0.07 ENST00000238647.5
IRF2BPL
interferon regulatory factor 2 binding protein like
chr5_+_79236092 0.07 ENST00000396137.5
JMY
junction mediating and regulatory protein, p53 cofactor
chr3_-_33440343 0.07 ENST00000283629.8
UBP1
upstream binding protein 1
chr2_+_138501753 0.06 ENST00000280098.9
SPOPL
speckle type BTB/POZ protein like
chr11_-_27472698 0.06 ENST00000389858.4
ENST00000379214.9
LGR4
leucine rich repeat containing G protein-coupled receptor 4
chr10_-_92574027 0.06 ENST00000650060.1
ENST00000265986.11
ENST00000679089.1
ENST00000676540.1
ENST00000678673.1
ENST00000677079.1
IDE
insulin degrading enzyme
chr13_+_98142552 0.06 ENST00000595437.5
FARP1
FERM, ARH/RhoGEF and pleckstrin domain protein 1
chr13_+_110713640 0.06 ENST00000333219.9
ING1
inhibitor of growth family member 1
chr18_+_48539017 0.05 ENST00000256413.8
CTIF
cap binding complex dependent translation initiation factor
chr17_+_58083407 0.05 ENST00000579991.3
DYNLL2
dynein light chain LC8-type 2
chr12_-_42144823 0.05 ENST00000398675.8
GXYLT1
glucoside xylosyltransferase 1
chr17_+_29390326 0.05 ENST00000261716.8
TAOK1
TAO kinase 1
chr12_+_94148553 0.05 ENST00000258526.9
PLXNC1
plexin C1
chr17_+_50719565 0.05 ENST00000625349.2
ENST00000393227.6
ENST00000240304.5
ENST00000505658.6
ENST00000505619.5
ENST00000510984.5
LUC7L3
LUC7 like 3 pre-mRNA splicing factor
chr12_+_67648737 0.05 ENST00000344096.4
ENST00000393555.3
DYRK2
dual specificity tyrosine phosphorylation regulated kinase 2
chr12_-_55842927 0.04 ENST00000322569.9
ENST00000409200.7
MMP19
matrix metallopeptidase 19
chr16_+_85613252 0.04 ENST00000253458.12
ENST00000393243.5
GSE1
Gse1 coiled-coil protein
chr1_+_151612001 0.04 ENST00000642376.1
ENST00000368843.8
ENST00000458013.7
SNX27
sorting nexin 27
chr8_-_94949350 0.04 ENST00000448464.6
ENST00000342697.5
TP53INP1
tumor protein p53 inducible nuclear protein 1
chr17_-_67245165 0.04 ENST00000580168.5
ENST00000358691.10
HELZ
helicase with zinc finger
chr17_-_76737321 0.04 ENST00000359995.10
ENST00000508921.7
ENST00000583836.1
ENST00000358156.6
ENST00000392485.2
SRSF2
serine and arginine rich splicing factor 2
chr10_+_95755652 0.04 ENST00000371207.8
ENTPD1
ectonucleoside triphosphate diphosphohydrolase 1
chr15_+_83654075 0.04 ENST00000567476.1
ENST00000286744.10
ADAMTSL3
ADAMTS like 3
chrX_-_53225176 0.03 ENST00000404049.7
ENST00000375401.8
KDM5C
lysine demethylase 5C
chr6_-_16761447 0.03 ENST00000244769.8
ENST00000436367.6
ATXN1
ataxin 1
chr5_+_65926556 0.03 ENST00000380943.6
ENST00000416865.6
ENST00000380935.5
ENST00000284037.10
ERBIN
erbb2 interacting protein
chr3_+_9731725 0.03 ENST00000433861.6
ENST00000383829.7
ENST00000684333.1
ENST00000683743.1
ENST00000683639.1
ENST00000684206.1
ENST00000420291.3
ENST00000424362.7
BRPF1
bromodomain and PHD finger containing 1
chr11_-_17014396 0.03 ENST00000355661.7
ENST00000532079.1
ENST00000531066.6
PLEKHA7
pleckstrin homology domain containing A7
chr10_+_100912955 0.03 ENST00000370271.7
ENST00000238961.9
ENST00000370269.3
ENST00000609386.1
SLF2
SMC5-SMC6 complex localization factor 2
chr14_+_56579782 0.03 ENST00000261556.11
ENST00000538838.5
TMEM260
transmembrane protein 260
chr17_+_8310220 0.03 ENST00000583529.1
ENST00000361926.8
ARHGEF15
Rho guanine nucleotide exchange factor 15
chr11_+_34051722 0.02 ENST00000341394.9
ENST00000389645.7
CAPRIN1
cell cycle associated protein 1
chr3_-_129183874 0.02 ENST00000422453.7
ENST00000451728.6
ENST00000446936.6
ENST00000502976.5
ENST00000500450.6
ENST00000441626.6
ENST00000504813.5
ENST00000512338.1
CNBP
CCHC-type zinc finger nucleic acid binding protein
chr5_-_94618522 0.02 ENST00000513200.7
ENST00000329378.7
ENST00000682413.1
KIAA0825
KIAA0825
chr3_-_108090971 0.02 ENST00000355354.13
ENST00000361309.6
CD47
CD47 molecule
chr14_-_22982544 0.02 ENST00000262713.7
AJUBA
ajuba LIM protein
chr2_-_197435002 0.02 ENST00000335508.11
ENST00000414963.2
ENST00000487698.5
SF3B1
splicing factor 3b subunit 1
chr22_+_21417357 0.02 ENST00000407464.7
HIC2
HIC ZBTB transcriptional repressor 2
chr14_-_67816574 0.02 ENST00000677026.1
ENST00000555452.1
ENST00000347230.9
ENST00000678386.1
ENST00000676620.1
ENST00000676512.1
ZFYVE26
zinc finger FYVE-type containing 26
chr6_-_75284736 0.02 ENST00000674038.1
ENST00000673730.1
ENST00000230461.11
TMEM30A
transmembrane protein 30A
chr9_-_132944600 0.02 ENST00000490179.3
ENST00000643583.1
ENST00000298552.9
ENST00000643072.1
ENST00000642745.1
ENST00000647462.1
ENST00000643875.1
ENST00000642627.1
ENST00000475903.6
ENST00000642617.1
ENST00000642646.1
ENST00000646625.1
ENST00000645150.1
ENST00000645129.1
ENST00000403810.6
ENST00000643691.1
ENST00000644097.1
TSC1
TSC complex subunit 1
chr7_-_20786879 0.02 ENST00000418710.3
ENST00000617581.4
ENST00000361443.4
SP8
Sp8 transcription factor
chrX_-_120469282 0.01 ENST00000200639.9
ENST00000371335.4
LAMP2
lysosomal associated membrane protein 2
chr2_-_206086057 0.01 ENST00000403263.6
INO80D
INO80 complex subunit D
chr17_-_68291116 0.01 ENST00000327268.8
ENST00000580666.6
SLC16A6
solute carrier family 16 member 6
chr3_-_123884290 0.01 ENST00000346322.9
ENST00000360772.7
ENST00000360304.8
MYLK
myosin light chain kinase
chr12_-_56636318 0.01 ENST00000549506.5
ENST00000379441.7
ENST00000551812.5
BAZ2A
bromodomain adjacent to zinc finger domain 2A
chr1_+_203795614 0.01 ENST00000367210.3
ENST00000432282.5
ENST00000453771.5
ENST00000367214.5
ENST00000639812.1
ENST00000367212.7
ENST00000332127.8
ENST00000550078.2
ZC3H11A
ZBED6
zinc finger CCCH-type containing 11A
zinc finger BED-type containing 6
chr5_+_180494430 0.01 ENST00000393356.7
ENST00000618123.4
CNOT6
CCR4-NOT transcription complex subunit 6
chr14_-_50231570 0.01 ENST00000216373.10
SOS2
SOS Ras/Rho guanine nucleotide exchange factor 2
chr16_+_56191476 0.01 ENST00000262493.12
GNAO1
G protein subunit alpha o1
chr2_-_179861604 0.01 ENST00000410066.7
ZNF385B
zinc finger protein 385B
chr4_+_125314918 0.01 ENST00000674496.2
ENST00000394329.9
FAT4
FAT atypical cadherin 4
chr14_+_23306816 0.01 ENST00000678311.1
ENST00000557579.2
ENST00000250405.10
ENST00000679000.1
ENST00000557236.6
ENST00000678502.1
ENST00000553781.5
BCL2L2
BCL2L2-PABPN1
BCL2 like 2
BCL2L2-PABPN1 readthrough
chr10_-_37857582 0.00 ENST00000395867.8
ENST00000611278.4
ZNF248
zinc finger protein 248
chr12_-_103841210 0.00 ENST00000392876.8
NT5DC3
5'-nucleotidase domain containing 3
chrX_+_49922605 0.00 ENST00000376088.7
CLCN5
chloride voltage-gated channel 5
chr20_+_58651228 0.00 ENST00000361830.7
ENST00000458280.5
ENST00000355957.9
ENST00000312283.12
ENST00000412911.5
ENST00000359617.8
ENST00000371141.8
STX16
syntaxin 16
chr18_+_69400852 0.00 ENST00000382713.10
DOK6
docking protein 6
chr3_-_131502946 0.00 ENST00000512877.1
ENST00000264995.8
ENST00000511168.5
ENST00000425847.6
MRPL3
mitochondrial ribosomal protein L3
chr2_-_160493799 0.00 ENST00000348849.8
RBMS1
RNA binding motif single stranded interacting protein 1
chr3_-_39153512 0.00 ENST00000273153.10
CSRNP1
cysteine and serine rich nuclear protein 1

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.1 GO:0038162 erythropoietin-mediated signaling pathway(GO:0038162) mast cell proliferation(GO:0070662)
0.3 0.8 GO:0090076 relaxation of skeletal muscle(GO:0090076)
0.2 0.6 GO:1904204 regulation of skeletal muscle hypertrophy(GO:1904204)
0.2 0.5 GO:0002071 glandular epithelial cell maturation(GO:0002071) positive regulation of type B pancreatic cell development(GO:2000078)
0.1 0.4 GO:0070904 L-ascorbic acid transport(GO:0015882) molecular hydrogen transport(GO:0015993) transepithelial L-ascorbic acid transport(GO:0070904)
0.1 1.1 GO:0070842 aggresome assembly(GO:0070842)
0.1 0.4 GO:0061026 cardiac muscle tissue regeneration(GO:0061026)
0.1 0.3 GO:1905006 negative regulation of epithelial to mesenchymal transition involved in endocardial cushion formation(GO:1905006)
0.1 0.4 GO:0007181 transforming growth factor beta receptor complex assembly(GO:0007181)
0.1 0.3 GO:0045074 interleukin-10 biosynthetic process(GO:0042091) regulation of interleukin-10 biosynthetic process(GO:0045074)
0.1 0.2 GO:1900827 maintenance of protein location in membrane(GO:0072658) maintenance of protein location in plasma membrane(GO:0072660) positive regulation of membrane depolarization during cardiac muscle cell action potential(GO:1900827)
0.0 0.1 GO:2000182 positive regulation of mitochondrial DNA metabolic process(GO:1901860) regulation of progesterone biosynthetic process(GO:2000182)
0.0 0.1 GO:2001025 positive regulation of response to drug(GO:2001025)
0.0 0.5 GO:0021702 cerebellar Purkinje cell layer formation(GO:0021694) cerebellar Purkinje cell differentiation(GO:0021702)
0.0 0.1 GO:0097252 oligodendrocyte apoptotic process(GO:0097252)
0.0 0.1 GO:0071630 nucleus-associated proteasomal ubiquitin-dependent protein catabolic process(GO:0071630)
0.0 0.1 GO:0060995 cell-cell signaling involved in kidney development(GO:0060995) Wnt signaling pathway involved in kidney development(GO:0061289) canonical Wnt signaling pathway involved in metanephric kidney development(GO:0061290) cell-cell signaling involved in metanephros development(GO:0072204)
0.0 0.2 GO:0010265 SCF complex assembly(GO:0010265)
0.0 0.1 GO:0007352 zygotic specification of dorsal/ventral axis(GO:0007352)
0.0 0.1 GO:0007296 vitellogenesis(GO:0007296)
0.0 0.5 GO:0051450 positive regulation of endothelial cell differentiation(GO:0045603) myoblast proliferation(GO:0051450)
0.0 0.1 GO:1901143 insulin catabolic process(GO:1901143)
0.0 0.1 GO:0016584 nucleosome positioning(GO:0016584)
0.0 0.0 GO:1904761 negative regulation of myofibroblast differentiation(GO:1904761)
0.0 0.1 GO:0070358 actin polymerization-dependent cell motility(GO:0070358)
0.0 0.1 GO:0072719 cellular response to cisplatin(GO:0072719)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0034673 inhibin-betaglycan-ActRII complex(GO:0034673)
0.1 0.6 GO:0042567 insulin-like growth factor ternary complex(GO:0042567)
0.0 0.6 GO:0035102 PRC1 complex(GO:0035102)
0.0 1.1 GO:0042629 mast cell granule(GO:0042629)
0.0 0.2 GO:0031467 Cul7-RING ubiquitin ligase complex(GO:0031467)
0.0 1.1 GO:0016235 aggresome(GO:0016235)
0.0 0.8 GO:0005790 smooth endoplasmic reticulum(GO:0005790)
0.0 0.2 GO:0070775 H3 histone acetyltransferase complex(GO:0070775) MOZ/MORF histone acetyltransferase complex(GO:0070776)
0.0 0.7 GO:0009925 basal plasma membrane(GO:0009925)
0.0 0.1 GO:0072669 tRNA-splicing ligase complex(GO:0072669)
0.0 0.1 GO:0042788 polysomal ribosome(GO:0042788)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0015229 L-ascorbate:sodium symporter activity(GO:0008520) sodium-dependent multivitamin transmembrane transporter activity(GO:0008523) L-ascorbic acid transporter activity(GO:0015229) sodium-dependent L-ascorbate transmembrane transporter activity(GO:0070890)
0.1 0.6 GO:0008321 Ral guanyl-nucleotide exchange factor activity(GO:0008321)
0.1 1.4 GO:0004716 receptor signaling protein tyrosine kinase activity(GO:0004716)
0.1 0.7 GO:0005114 type II transforming growth factor beta receptor binding(GO:0005114)
0.1 0.6 GO:0031995 insulin-like growth factor II binding(GO:0031995)
0.0 0.8 GO:0015467 G-protein activated inward rectifier potassium channel activity(GO:0015467)
0.0 1.1 GO:0070628 proteasome binding(GO:0070628)
0.0 0.3 GO:0008142 oxysterol binding(GO:0008142)
0.0 0.1 GO:0045322 unmethylated CpG binding(GO:0045322)
0.0 0.1 GO:0033842 N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase activity(GO:0033842)
0.0 0.1 GO:0031626 beta-endorphin binding(GO:0031626)
0.0 0.4 GO:0001087 transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087)
0.0 0.3 GO:0055106 ubiquitin-protein transferase regulator activity(GO:0055106)
0.0 0.1 GO:0004118 cGMP-stimulated cyclic-nucleotide phosphodiesterase activity(GO:0004118)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 PID HEDGEHOG 2PATHWAY Signaling events mediated by the Hedgehog family
0.0 1.0 PID KIT PATHWAY Signaling events mediated by Stem cell factor receptor (c-Kit)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.1 REACTOME REGULATION OF KIT SIGNALING Genes involved in Regulation of KIT signaling
0.0 0.6 REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs)
0.0 0.8 REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits