Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
FOSL2 | hg38_v1_chr2_+_28395511_28395743 | 0.81 | 5.9e-08 | Click! |
SMARCC1 | hg38_v1_chr3_-_47781837_47781908 | -0.38 | 4.1e-02 | Click! |
Promoter | Score | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr18_+_23873000 Show fit | 23.17 |
ENST00000269217.11
ENST00000587184.5 |
laminin subunit alpha 3 |
|
chr1_+_150508074 Show fit | 20.83 |
ENST00000369049.8
|
extracellular matrix protein 1 |
|
chr1_+_150508099 Show fit | 20.71 |
ENST00000346569.6
ENST00000369047.9 |
extracellular matrix protein 1 |
|
chr19_-_35528221 Show fit | 20.34 |
ENST00000588674.5
ENST00000452271.7 ENST00000518157.1 |
suprabasin |
|
chr17_-_41612757 Show fit | 15.68 |
ENST00000301653.9
ENST00000593067.1 |
keratin 16 |
|
chr1_-_153549120 Show fit | 12.37 |
ENST00000368712.1
|
S100 calcium binding protein A3 |
|
chr2_+_113117889 Show fit | 11.71 |
ENST00000361779.7
ENST00000259206.9 ENST00000354115.6 |
interleukin 1 receptor antagonist |
|
chr1_-_153057504 Show fit | 10.45 |
ENST00000392653.3
|
small proline rich protein 2A |
|
chr6_+_73695779 Show fit | 10.14 |
ENST00000422508.6
ENST00000437994.6 |
CD109 molecule |
|
chr6_+_73696145 Show fit | 9.97 |
ENST00000287097.6
|
CD109 molecule |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.4 | 41.4 | GO:0030502 | negative regulation of bone mineralization(GO:0030502) |
1.3 | 36.0 | GO:0031581 | hemidesmosome assembly(GO:0031581) |
0.4 | 26.1 | GO:0018149 | peptide cross-linking(GO:0018149) |
0.9 | 18.9 | GO:0051546 | keratinocyte migration(GO:0051546) |
0.3 | 18.7 | GO:0032467 | positive regulation of cytokinesis(GO:0032467) |
3.6 | 18.1 | GO:0090362 | positive regulation of platelet-derived growth factor production(GO:0090362) |
3.6 | 18.1 | GO:0072674 | multinuclear osteoclast differentiation(GO:0072674) osteoclast fusion(GO:0072675) |
2.9 | 17.4 | GO:0007296 | vitellogenesis(GO:0007296) |
0.2 | 16.7 | GO:0070268 | cornification(GO:0070268) |
0.1 | 13.7 | GO:0045669 | positive regulation of osteoblast differentiation(GO:0045669) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 48.9 | GO:0005615 | extracellular space(GO:0005615) |
0.7 | 43.3 | GO:0001533 | cornified envelope(GO:0001533) |
2.1 | 41.7 | GO:0031089 | platelet dense granule lumen(GO:0031089) |
3.4 | 24.0 | GO:0005610 | laminin-5 complex(GO:0005610) |
0.1 | 22.5 | GO:0005882 | intermediate filament(GO:0005882) |
0.5 | 19.5 | GO:0031092 | platelet alpha granule membrane(GO:0031092) |
0.0 | 19.3 | GO:0030667 | secretory granule membrane(GO:0030667) |
0.1 | 18.0 | GO:0031012 | extracellular matrix(GO:0031012) |
0.2 | 17.8 | GO:0097517 | stress fiber(GO:0001725) contractile actin filament bundle(GO:0097517) |
0.1 | 17.7 | GO:0031985 | Golgi cisterna(GO:0031985) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 50.8 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.0 | 44.8 | GO:0005198 | structural molecule activity(GO:0005198) |
5.9 | 41.5 | GO:0005134 | interleukin-2 receptor binding(GO:0005134) |
0.2 | 25.9 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.5 | 21.3 | GO:0050431 | transforming growth factor beta binding(GO:0050431) |
0.2 | 16.1 | GO:0097110 | scaffold protein binding(GO:0097110) |
0.1 | 14.0 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.1 | 13.1 | GO:0005178 | integrin binding(GO:0005178) |
3.9 | 11.7 | GO:0005150 | interleukin-1, Type I receptor binding(GO:0005150) |
1.8 | 10.6 | GO:0031962 | mineralocorticoid receptor binding(GO:0031962) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 53.1 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 40.6 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
1.9 | 37.0 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.5 | 31.9 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.2 | 18.2 | PID RET PATHWAY | Signaling events regulated by Ret tyrosine kinase |
0.0 | 16.5 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.2 | 14.6 | PID RHOA PATHWAY | RhoA signaling pathway |
0.7 | 12.8 | ST STAT3 PATHWAY | STAT3 Pathway |
0.2 | 10.7 | PID BCR 5PATHWAY | BCR signaling pathway |
0.3 | 10.6 | PID SMAD2 3PATHWAY | Regulation of cytoplasmic and nuclear SMAD2/3 signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 29.3 | REACTOME CELL JUNCTION ORGANIZATION | Genes involved in Cell junction organization |
0.7 | 16.9 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |
0.2 | 11.6 | REACTOME IL1 SIGNALING | Genes involved in Interleukin-1 signaling |
0.3 | 11.2 | REACTOME SIGNALING BY NODAL | Genes involved in Signaling by NODAL |
0.2 | 10.4 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |
0.4 | 9.9 | REACTOME HYALURONAN UPTAKE AND DEGRADATION | Genes involved in Hyaluronan uptake and degradation |
0.2 | 9.7 | REACTOME AMYLOIDS | Genes involved in Amyloids |
0.0 | 9.0 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.5 | 8.6 | REACTOME IL 6 SIGNALING | Genes involved in Interleukin-6 signaling |
0.4 | 7.8 | REACTOME SYNTHESIS OF PE | Genes involved in Synthesis of PE |