Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
IRF1 | hg38_v1_chr5_-_132490750_132490840 | 0.90 | 1.1e-11 | Click! |
STAT2 | hg38_v1_chr12_-_56360084_56360146 | 0.69 | 2.4e-05 | Click! |
IRF8 | hg38_v1_chr16_+_85899121_85899171 | 0.17 | 3.8e-01 | Click! |
IRF2 | hg38_v1_chr4_-_184474518_184474556 | 0.13 | 4.8e-01 | Click! |
Promoter | Score | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr8_+_39913881 Show fit | 29.14 |
ENST00000518237.6
|
indoleamine 2,3-dioxygenase 1 |
|
chr2_-_6865901 Show fit | 25.96 |
ENST00000256722.10
|
cytidine/uridine monophosphate kinase 2 |
|
chr1_-_206946448 Show fit | 20.73 |
ENST00000356495.5
|
polymeric immunoglobulin receptor |
|
chr6_+_32854179 Show fit | 19.01 |
ENST00000374859.3
|
proteasome 20S subunit beta 9 |
|
chr21_+_41361999 Show fit | 15.80 |
ENST00000436410.5
ENST00000435611.6 ENST00000330714.8 |
MX dynamin like GTPase 2 |
|
chr6_-_29559724 Show fit | 15.15 |
ENST00000377050.5
|
ubiquitin D |
|
chr1_+_78649818 Show fit | 14.64 |
ENST00000370747.9
ENST00000438486.1 |
interferon induced protein 44 |
|
chr1_-_27672178 Show fit | 13.23 |
ENST00000339145.8
ENST00000361157.11 ENST00000362020.4 ENST00000679644.1 |
interferon alpha inducible protein 6 |
|
chr19_-_17405554 Show fit | 13.16 |
ENST00000252593.7
|
bone marrow stromal cell antigen 2 |
|
chr7_-_122886706 Show fit | 13.07 |
ENST00000313070.11
ENST00000334010.11 ENST00000615869.4 |
calcium dependent secretion activator 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.3 | 45.8 | GO:0003374 | dynamin polymerization involved in membrane fission(GO:0003373) dynamin polymerization involved in mitochondrial fission(GO:0003374) |
0.4 | 40.6 | GO:0006521 | regulation of cellular amino acid metabolic process(GO:0006521) |
6.7 | 33.6 | GO:1900245 | positive regulation of MDA-5 signaling pathway(GO:1900245) |
0.8 | 33.5 | GO:0035456 | response to interferon-beta(GO:0035456) |
2.2 | 33.3 | GO:0035457 | cellular response to interferon-alpha(GO:0035457) |
7.3 | 29.1 | GO:0036269 | swimming behavior(GO:0036269) |
8.7 | 26.0 | GO:0006227 | dUDP biosynthetic process(GO:0006227) dTDP biosynthetic process(GO:0006233) pyrimidine nucleoside diphosphate biosynthetic process(GO:0009139) pyrimidine deoxyribonucleoside diphosphate metabolic process(GO:0009196) pyrimidine deoxyribonucleoside diphosphate biosynthetic process(GO:0009197) dTDP metabolic process(GO:0046072) dUDP metabolic process(GO:0046077) |
0.9 | 25.4 | GO:0072643 | interferon-gamma secretion(GO:0072643) |
2.2 | 22.4 | GO:0032020 | ISG15-protein conjugation(GO:0032020) |
0.1 | 21.6 | GO:0007286 | spermatid development(GO:0007286) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 108.9 | GO:0005739 | mitochondrion(GO:0005739) |
0.1 | 37.2 | GO:0031965 | nuclear membrane(GO:0031965) |
4.5 | 36.2 | GO:1990111 | spermatoproteasome complex(GO:1990111) |
0.4 | 34.3 | GO:0035577 | azurophil granule membrane(GO:0035577) |
4.9 | 29.1 | GO:0030485 | smooth muscle contractile fiber(GO:0030485) |
0.1 | 22.6 | GO:0045111 | intermediate filament cytoskeleton(GO:0045111) |
0.0 | 22.3 | GO:0005789 | endoplasmic reticulum membrane(GO:0005789) |
0.2 | 18.5 | GO:0005811 | lipid particle(GO:0005811) |
0.1 | 16.7 | GO:0072562 | blood microparticle(GO:0072562) |
0.1 | 16.5 | GO:0042734 | presynaptic membrane(GO:0042734) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 78.9 | GO:0005525 | GTP binding(GO:0005525) |
0.4 | 64.4 | GO:0003727 | single-stranded RNA binding(GO:0003727) |
1.3 | 37.1 | GO:0004298 | threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003) |
9.7 | 29.1 | GO:0033754 | indoleamine 2,3-dioxygenase activity(GO:0033754) |
8.7 | 26.0 | GO:0004798 | thymidylate kinase activity(GO:0004798) |
2.6 | 20.7 | GO:0019763 | immunoglobulin receptor activity(GO:0019763) |
0.1 | 18.1 | GO:0042826 | histone deacetylase binding(GO:0042826) |
4.4 | 17.5 | GO:0003987 | acetate-CoA ligase activity(GO:0003987) |
0.6 | 15.2 | GO:0070628 | proteasome binding(GO:0070628) |
0.3 | 14.9 | GO:0051539 | 4 iron, 4 sulfur cluster binding(GO:0051539) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 17.4 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.1 | 15.7 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.2 | 14.7 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.2 | 14.1 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
0.3 | 10.3 | ST G ALPHA S PATHWAY | G alpha s Pathway |
0.1 | 9.4 | PID IL4 2PATHWAY | IL4-mediated signaling events |
0.1 | 9.4 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.0 | 5.6 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 4.2 | PID TELOMERASE PATHWAY | Regulation of Telomerase |
0.1 | 3.8 | SIG CD40PATHWAYMAP | Genes related to CD40 signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.5 | 164.2 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.5 | 36.7 | REACTOME VIF MEDIATED DEGRADATION OF APOBEC3G | Genes involved in Vif-mediated degradation of APOBEC3G |
2.7 | 32.9 | REACTOME TRYPTOPHAN CATABOLISM | Genes involved in Tryptophan catabolism |
1.2 | 20.1 | REACTOME TRAF3 DEPENDENT IRF ACTIVATION PATHWAY | Genes involved in TRAF3-dependent IRF activation pathway |
1.5 | 19.9 | REACTOME ETHANOL OXIDATION | Genes involved in Ethanol oxidation |
0.4 | 17.9 | REACTOME NEGATIVE REGULATORS OF RIG I MDA5 SIGNALING | Genes involved in Negative regulators of RIG-I/MDA5 signaling |
0.6 | 10.6 | REACTOME IL 7 SIGNALING | Genes involved in Interleukin-7 signaling |
0.5 | 10.4 | REACTOME PURINE CATABOLISM | Genes involved in Purine catabolism |
0.5 | 9.9 | REACTOME INITIAL TRIGGERING OF COMPLEMENT | Genes involved in Initial triggering of complement |
2.0 | 9.8 | REACTOME ENDOSOMAL VACUOLAR PATHWAY | Genes involved in Endosomal/Vacuolar pathway |