Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
SMC3 | hg38_v1_chr10_+_110567666_110567765 | -0.52 | 3.2e-03 | Click! |
RAD21 | hg38_v1_chr8_-_116874746_116874828 | -0.22 | 2.5e-01 | Click! |
Promoter | Score | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_+_149141817 Show fit | 4.09 |
ENST00000504238.5
|
actin binding LIM protein family member 3 |
|
chr5_+_149141483 Show fit | 3.97 |
ENST00000326685.11
ENST00000309868.12 |
actin binding LIM protein family member 3 |
|
chr5_+_149141573 Show fit | 3.94 |
ENST00000506113.5
|
actin binding LIM protein family member 3 |
|
chr4_+_74933095 Show fit | 2.39 |
ENST00000513238.5
|
prostate androgen-regulated mucin-like protein 1 |
|
chr4_+_74933108 Show fit | 2.36 |
ENST00000307428.7
|
prostate androgen-regulated mucin-like protein 1 |
|
chr4_+_7192519 Show fit | 2.18 |
ENST00000507866.6
|
sortilin related VPS10 domain containing receptor 2 |
|
chr19_-_1513003 Show fit | 1.46 |
ENST00000330475.9
ENST00000586272.5 ENST00000590562.5 |
ADAMTS like 5 |
|
chr7_+_90154442 Show fit | 1.43 |
ENST00000297205.7
|
STEAP family member 1 |
|
chr17_-_74361860 Show fit | 1.36 |
ENST00000375366.4
|
BTB domain containing 17 |
|
chr15_+_45430579 Show fit | 1.35 |
ENST00000558435.5
ENST00000344300.3 ENST00000396650.7 |
chromosome 15 open reading frame 48 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 12.5 | GO:1903955 | positive regulation of protein targeting to mitochondrion(GO:1903955) |
0.1 | 3.6 | GO:0051973 | positive regulation of telomerase activity(GO:0051973) |
0.1 | 2.7 | GO:0007216 | G-protein coupled glutamate receptor signaling pathway(GO:0007216) |
0.0 | 2.7 | GO:0007157 | heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0007157) |
0.1 | 2.2 | GO:2000291 | regulation of myoblast proliferation(GO:2000291) |
0.6 | 1.9 | GO:0070429 | regulation of toll-like receptor 5 signaling pathway(GO:0034147) negative regulation of toll-like receptor 5 signaling pathway(GO:0034148) negative regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway(GO:0070429) |
0.0 | 1.9 | GO:0007218 | neuropeptide signaling pathway(GO:0007218) |
0.3 | 1.8 | GO:0097461 | ferric iron import into cell(GO:0097461) ferric iron import across plasma membrane(GO:0098706) |
0.1 | 1.8 | GO:0071316 | cellular response to nicotine(GO:0071316) |
0.2 | 1.7 | GO:0060154 | cellular process regulating host cell cycle in response to virus(GO:0060154) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 12.5 | GO:0097517 | stress fiber(GO:0001725) contractile actin filament bundle(GO:0097517) |
0.0 | 10.0 | GO:0010008 | endosome membrane(GO:0010008) |
0.0 | 2.6 | GO:0045178 | basal part of cell(GO:0045178) |
0.0 | 2.4 | GO:0005913 | cell-cell adherens junction(GO:0005913) |
0.1 | 2.2 | GO:0001527 | microfibril(GO:0001527) fibril(GO:0043205) |
0.0 | 2.0 | GO:0030173 | integral component of Golgi membrane(GO:0030173) |
0.0 | 1.9 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.2 | 1.7 | GO:1990316 | ATG1/ULK1 kinase complex(GO:1990316) |
0.1 | 1.7 | GO:0097136 | Bcl-2 family protein complex(GO:0097136) |
0.0 | 1.6 | GO:0055038 | recycling endosome membrane(GO:0055038) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 11.5 | GO:0003779 | actin binding(GO:0003779) |
0.0 | 3.7 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.1 | 2.4 | GO:0008188 | neuropeptide receptor activity(GO:0008188) |
0.1 | 2.3 | GO:0035256 | G-protein coupled glutamate receptor binding(GO:0035256) |
0.0 | 2.0 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
0.1 | 1.9 | GO:0061578 | Lys63-specific deubiquitinase activity(GO:0061578) |
0.3 | 1.8 | GO:0008823 | cupric reductase activity(GO:0008823) ferric-chelate reductase (NADPH) activity(GO:0052851) |
0.0 | 1.8 | GO:0017112 | Rab guanyl-nucleotide exchange factor activity(GO:0017112) |
0.1 | 1.7 | GO:0051434 | BH3 domain binding(GO:0051434) |
0.2 | 1.6 | GO:0030144 | alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity(GO:0030144) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.1 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 3.6 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.0 | 2.1 | PID EPHB FWD PATHWAY | EPHB forward signaling |
0.0 | 1.8 | PID NFKAPPAB CANONICAL PATHWAY | Canonical NF-kappaB pathway |
0.0 | 1.8 | PID RAS PATHWAY | Regulation of Ras family activation |
0.1 | 1.7 | SA PROGRAMMED CELL DEATH | Programmed cell death, or apoptosis, eliminates damaged or unneeded cells. |
0.0 | 1.7 | PID INTEGRIN CS PATHWAY | Integrin family cell surface interactions |
0.0 | 1.5 | PID IL27 PATHWAY | IL27-mediated signaling events |
0.0 | 1.4 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 1.0 | PID FAK PATHWAY | Signaling events mediated by focal adhesion kinase |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 12.0 | REACTOME DCC MEDIATED ATTRACTIVE SIGNALING | Genes involved in DCC mediated attractive signaling |
0.0 | 2.3 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
0.0 | 2.2 | REACTOME 3 UTR MEDIATED TRANSLATIONAL REGULATION | Genes involved in 3' -UTR-mediated translational regulation |
0.1 | 1.7 | REACTOME RETROGRADE NEUROTROPHIN SIGNALLING | Genes involved in Retrograde neurotrophin signalling |
0.0 | 1.7 | REACTOME NOD1 2 SIGNALING PATHWAY | Genes involved in NOD1/2 Signaling Pathway |
0.1 | 1.6 | REACTOME INFLAMMASOMES | Genes involved in Inflammasomes |
0.1 | 1.5 | REACTOME GLYCOGEN BREAKDOWN GLYCOGENOLYSIS | Genes involved in Glycogen breakdown (glycogenolysis) |
0.0 | 1.5 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.0 | 1.4 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |
0.0 | 1.3 | REACTOME TRIGLYCERIDE BIOSYNTHESIS | Genes involved in Triglyceride Biosynthesis |