Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
RCOR1 | hg38_v1_chr14_+_102592611_102592668 | -0.67 | 4.6e-05 | Click! |
MTA3 | hg38_v1_chr2_+_42568510_42568536 | -0.63 | 1.7e-04 | Click! |
Promoter | Score | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_-_123534559 Show fit | 27.78 |
ENST00000324698.11
|
IQ motif and ubiquitin domain containing |
|
chr19_+_41114430 Show fit | 23.93 |
ENST00000331105.7
|
cytochrome P450 family 2 subfamily F member 1 |
|
chr10_-_27998833 Show fit | 16.61 |
ENST00000673439.1
|
outer dynein arm docking complex subunit 2 |
|
chr4_-_7042931 Show fit | 15.48 |
ENST00000310085.6
|
coiled-coil domain containing 96 |
|
chr16_-_53052849 Show fit | 15.28 |
ENST00000619363.2
|
novel protein |
|
chr6_-_33080710 Show fit | 15.08 |
ENST00000419277.5
|
major histocompatibility complex, class II, DP alpha 1 |
|
chr5_-_180591488 Show fit | 14.50 |
ENST00000292641.4
|
secretoglobin family 3A member 1 |
|
chr10_-_27999036 Show fit | 13.74 |
ENST00000305242.10
|
outer dynein arm docking complex subunit 2 |
|
chr4_-_16083714 Show fit | 13.72 |
ENST00000508167.5
|
prominin 1 |
|
chr4_-_16084002 Show fit | 13.24 |
ENST00000447510.7
|
prominin 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
3.2 | 104.2 | GO:0044458 | motile cilium assembly(GO:0044458) |
1.7 | 93.9 | GO:0035082 | axoneme assembly(GO:0035082) |
1.3 | 69.9 | GO:0042073 | intraciliary transport(GO:0042073) |
0.3 | 68.4 | GO:0060271 | cilium morphogenesis(GO:0060271) |
6.0 | 48.3 | GO:0072139 | glomerular parietal epithelial cell differentiation(GO:0072139) |
1.5 | 34.1 | GO:0019373 | epoxygenase P450 pathway(GO:0019373) |
0.4 | 31.4 | GO:0001895 | retina homeostasis(GO:0001895) |
0.4 | 28.6 | GO:0048791 | calcium ion-regulated exocytosis of neurotransmitter(GO:0048791) |
6.4 | 25.6 | GO:0060741 | prostate gland stromal morphogenesis(GO:0060741) |
0.3 | 25.2 | GO:0097031 | NADH dehydrogenase complex assembly(GO:0010257) mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.1 | 93.9 | GO:0005930 | axoneme(GO:0005930) ciliary plasm(GO:0097014) |
0.7 | 60.1 | GO:0036064 | ciliary basal body(GO:0036064) |
3.0 | 56.1 | GO:0042613 | MHC class II protein complex(GO:0042613) |
0.5 | 55.9 | GO:0031514 | motile cilium(GO:0031514) |
2.0 | 46.9 | GO:0036038 | MKS complex(GO:0036038) |
1.5 | 45.9 | GO:0030992 | intraciliary transport particle B(GO:0030992) |
1.5 | 32.0 | GO:0042622 | photoreceptor outer segment membrane(GO:0042622) |
1.1 | 31.0 | GO:0032391 | photoreceptor connecting cilium(GO:0032391) |
0.7 | 28.2 | GO:0034451 | centriolar satellite(GO:0034451) |
1.6 | 25.9 | GO:0001520 | outer dense fiber(GO:0001520) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 133.2 | GO:0003677 | DNA binding(GO:0003677) |
2.2 | 43.4 | GO:0008392 | arachidonic acid monooxygenase activity(GO:0008391) arachidonic acid epoxygenase activity(GO:0008392) |
0.4 | 39.1 | GO:0042805 | actinin binding(GO:0042805) |
1.1 | 37.4 | GO:0019198 | transmembrane receptor protein tyrosine phosphatase activity(GO:0005001) transmembrane receptor protein phosphatase activity(GO:0019198) |
1.0 | 34.3 | GO:0042605 | peptide antigen binding(GO:0042605) |
0.1 | 28.8 | GO:0004842 | ubiquitin-protein transferase activity(GO:0004842) |
0.2 | 27.4 | GO:0019905 | syntaxin binding(GO:0019905) |
0.3 | 25.8 | GO:0004402 | histone acetyltransferase activity(GO:0004402) |
1.8 | 24.8 | GO:0032395 | MHC class II receptor activity(GO:0032395) |
0.3 | 23.8 | GO:0016820 | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances(GO:0016820) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 29.0 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.4 | 27.3 | PID BMP PATHWAY | BMP receptor signaling |
0.4 | 19.6 | ST GRANULE CELL SURVIVAL PATHWAY | Granule Cell Survival Pathway is a specific case of more general PAC1 Receptor Pathway. |
0.2 | 16.0 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
0.3 | 15.0 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.7 | 14.9 | PID ALK2 PATHWAY | ALK2 signaling events |
0.2 | 14.4 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.1 | 14.2 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
0.1 | 13.7 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 13.3 | PID IL12 2PATHWAY | IL12-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 51.2 | REACTOME GENERIC TRANSCRIPTION PATHWAY | Genes involved in Generic Transcription Pathway |
2.1 | 44.2 | REACTOME TRANSLOCATION OF ZAP 70 TO IMMUNOLOGICAL SYNAPSE | Genes involved in Translocation of ZAP-70 to Immunological synapse |
0.7 | 40.7 | REACTOME IRON UPTAKE AND TRANSPORT | Genes involved in Iron uptake and transport |
1.7 | 30.9 | REACTOME XENOBIOTICS | Genes involved in Xenobiotics |
0.8 | 26.0 | REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS | Genes involved in Termination of O-glycan biosynthesis |
0.3 | 24.5 | REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION | Genes involved in NOTCH1 Intracellular Domain Regulates Transcription |
0.4 | 24.4 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.3 | 24.2 | REACTOME RESPIRATORY ELECTRON TRANSPORT ATP SYNTHESIS BY CHEMIOSMOTIC COUPLING AND HEAT PRODUCTION BY UNCOUPLING PROTEINS | Genes involved in Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins. |
0.3 | 23.9 | REACTOME REGULATION OF ORNITHINE DECARBOXYLASE ODC | Genes involved in Regulation of ornithine decarboxylase (ODC) |
0.2 | 19.8 | REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES | Genes involved in Loss of Nlp from mitotic centrosomes |