Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
SREBF1 | hg38_v1_chr17_-_17836973_17836993 | -0.68 | 3.1e-05 | Click! |
TFE3 | hg38_v1_chrX_-_49043345_49043365 | -0.37 | 4.2e-02 | Click! |
Promoter | Score | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_-_206946448 Show fit | 8.45 |
ENST00000356495.5
|
polymeric immunoglobulin receptor |
|
chr4_-_99352730 Show fit | 5.69 |
ENST00000510055.5
ENST00000515683.6 ENST00000511397.3 |
alcohol dehydrogenase 1C (class I), gamma polypeptide |
|
chr3_-_19946970 Show fit | 5.63 |
ENST00000344838.8
|
EF-hand domain family member B |
|
chr8_-_70669142 Show fit | 4.92 |
ENST00000522447.5
ENST00000276590.5 |
lactamase beta 2 |
|
chr22_+_30607145 Show fit | 4.77 |
ENST00000405742.7
|
transcobalamin 2 |
|
chr22_+_30607167 Show fit | 4.67 |
ENST00000215838.8
|
transcobalamin 2 |
|
chr22_+_30607203 Show fit | 4.67 |
ENST00000407817.3
|
transcobalamin 2 |
|
chr22_+_30607072 Show fit | 4.66 |
ENST00000450638.5
|
transcobalamin 2 |
|
chr2_+_119429889 Show fit | 4.49 |
ENST00000409826.1
ENST00000417645.1 |
transmembrane protein 37 |
|
chr12_-_62935117 Show fit | 4.38 |
ENST00000228705.7
|
protein phosphatase, Mg2+/Mn2+ dependent 1H |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.6 | 18.8 | GO:0006824 | cobalt ion transport(GO:0006824) |
4.2 | 12.6 | GO:0002415 | immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor(GO:0002415) |
1.0 | 8.3 | GO:0015811 | L-cystine transport(GO:0015811) |
0.4 | 8.0 | GO:0036158 | outer dynein arm assembly(GO:0036158) |
0.8 | 7.6 | GO:1990253 | cellular response to leucine starvation(GO:1990253) |
0.4 | 6.1 | GO:0006069 | ethanol oxidation(GO:0006069) |
0.2 | 4.7 | GO:0009756 | carbohydrate mediated signaling(GO:0009756) |
0.4 | 4.5 | GO:0043985 | histone H4-R3 methylation(GO:0043985) |
0.1 | 4.5 | GO:0010718 | positive regulation of epithelial to mesenchymal transition(GO:0010718) |
0.0 | 4.0 | GO:0044782 | cilium organization(GO:0044782) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 26.4 | GO:0043202 | lysosomal lumen(GO:0043202) |
0.1 | 12.8 | GO:0042470 | melanosome(GO:0042470) pigment granule(GO:0048770) |
0.1 | 7.8 | GO:0035577 | azurophil granule membrane(GO:0035577) |
1.2 | 6.9 | GO:1990131 | Gtr1-Gtr2 GTPase complex(GO:1990131) |
0.1 | 6.5 | GO:0036064 | ciliary basal body(GO:0036064) |
0.1 | 5.9 | GO:0033116 | endoplasmic reticulum-Golgi intermediate compartment membrane(GO:0033116) |
0.6 | 5.6 | GO:0036157 | outer dynein arm(GO:0036157) |
0.1 | 4.4 | GO:0009925 | basal plasma membrane(GO:0009925) |
0.5 | 3.7 | GO:0032777 | Piccolo NuA4 histone acetyltransferase complex(GO:0032777) |
0.2 | 3.2 | GO:0033256 | I-kappaB/NF-kappaB complex(GO:0033256) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.3 | 18.8 | GO:0031419 | cobalamin binding(GO:0031419) |
1.1 | 8.4 | GO:0019763 | immunoglobulin receptor activity(GO:0019763) |
1.0 | 8.3 | GO:0015184 | L-cystine transmembrane transporter activity(GO:0015184) |
0.0 | 6.8 | GO:0001047 | core promoter binding(GO:0001047) |
0.8 | 6.1 | GO:0004024 | alcohol dehydrogenase activity, zinc-dependent(GO:0004024) |
0.2 | 5.8 | GO:0038187 | signaling pattern recognition receptor activity(GO:0008329) pattern recognition receptor activity(GO:0038187) |
0.4 | 5.6 | GO:0045504 | dynein heavy chain binding(GO:0045504) |
0.1 | 4.8 | GO:0019003 | GDP binding(GO:0019003) |
0.1 | 4.6 | GO:0070888 | E-box binding(GO:0070888) |
0.0 | 4.0 | GO:0004722 | protein serine/threonine phosphatase activity(GO:0004722) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 11.7 | PID IL4 2PATHWAY | IL4-mediated signaling events |
0.2 | 8.2 | PID MYC PATHWAY | C-MYC pathway |
0.0 | 5.0 | PID HDAC CLASSI PATHWAY | Signaling events mediated by HDAC Class I |
0.0 | 4.6 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.0 | 4.5 | PID MTOR 4PATHWAY | mTOR signaling pathway |
0.0 | 3.9 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 3.5 | PID SMAD2 3NUCLEAR PATHWAY | Regulation of nuclear SMAD2/3 signaling |
0.0 | 3.0 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.0 | 3.0 | PID RHOA PATHWAY | RhoA signaling pathway |
0.0 | 2.7 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 6.1 | REACTOME ETHANOL OXIDATION | Genes involved in Ethanol oxidation |
0.1 | 5.0 | REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN | Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein |
0.1 | 4.3 | REACTOME TRANSFERRIN ENDOCYTOSIS AND RECYCLING | Genes involved in Transferrin endocytosis and recycling |
0.1 | 4.1 | REACTOME LYSOSOME VESICLE BIOGENESIS | Genes involved in Lysosome Vesicle Biogenesis |
0.2 | 3.5 | REACTOME PASSIVE TRANSPORT BY AQUAPORINS | Genes involved in Passive Transport by Aquaporins |
0.1 | 3.1 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.0 | 2.8 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.0 | 2.8 | REACTOME MHC CLASS II ANTIGEN PRESENTATION | Genes involved in MHC class II antigen presentation |
0.0 | 2.5 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.1 | 2.4 | REACTOME XENOBIOTICS | Genes involved in Xenobiotics |