Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Download the whole report

Name	miRBASE accession
hsa-miR-499a-5p Links miRBase	MIMAT0002870

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Promoter	Score	Transcript	Gene	Gene Info
chrY_+_12904860 Show fit	0.32	ENST00000336079.8	DDX3Y Links Ensembl NCBI GeneCards UniProt Show fit	DEAD-box helicase 3 Y-linked
chr2_-_86337654 Show fit	0.19	ENST00000165698.9	REEP1 Links Ensembl NCBI GeneCards UniProt Show fit	receptor accessory protein 1
chr8_-_23854796 Show fit	0.16	ENST00000290271.7	STC1 Links Ensembl NCBI GeneCards UniProt Show fit	stanniocalcin 1
chr3_-_18425295 Show fit	0.11	ENST00000338745.11 ENST00000450898.1	SATB1 Links Ensembl NCBI GeneCards UniProt Show fit	SATB homeobox 1
chr16_+_54930827 Show fit	0.11	ENST00000394636.9	IRX5 Links Ensembl NCBI GeneCards UniProt Show fit	iroquois homeobox 5
chr20_+_52972347 Show fit	0.10	ENST00000371497.10	TSHZ2 Links Ensembl NCBI GeneCards UniProt Show fit	teashirt zinc finger homeobox 2
chr7_+_90596281 Show fit	0.09	ENST00000380050.8	CDK14 Links Ensembl NCBI GeneCards UniProt Show fit	cyclin dependent kinase 14
chr6_-_165662100 Show fit	0.09	ENST00000366882.6	PDE10A Links Ensembl NCBI GeneCards UniProt Show fit	phosphodiesterase 10A
chr7_-_140176970 Show fit	0.09	ENST00000397560.7	KDM7A Links Ensembl NCBI GeneCards UniProt Show fit	lysine demethylase 7A
chr2_-_71227055 Show fit	0.08	ENST00000244221.9	PAIP2B Links Ensembl NCBI GeneCards UniProt Show fit	poly(A) binding protein interacting protein 2B
chr8_+_48008409 Show fit	0.08	ENST00000523432.5 ENST00000521346.5 ENST00000523111.7 ENST00000517630.5	UBE2V2 Links Ensembl NCBI GeneCards UniProt Show fit	ubiquitin conjugating enzyme E2 V2
chr7_-_120858066 Show fit	0.07	ENST00000222747.8	TSPAN12 Links Ensembl NCBI GeneCards UniProt Show fit	tetraspanin 12
chr3_+_43286512 Show fit	0.06	ENST00000454177.5 ENST00000429705.6 ENST00000296088.12 ENST00000437827.1	SNRK Links Ensembl NCBI GeneCards UniProt Show fit	SNF related kinase
chr12_-_26125023 Show fit	0.06	ENST00000242728.5	BHLHE41 Links Ensembl NCBI GeneCards UniProt Show fit	basic helix-loop-helix family member e41
chr5_+_57173948 Show fit	0.05	ENST00000424459.7	GPBP1 Links Ensembl NCBI GeneCards UniProt Show fit	GC-rich promoter binding protein 1
chr10_-_35642286 Show fit	0.05	ENST00000374694.3	FZD8 Links Ensembl NCBI GeneCards UniProt Show fit	frizzled class receptor 8
chr13_+_99606651 Show fit	0.05	ENST00000376355.7 ENST00000376354.5 ENST00000339105.8	CLYBL Links Ensembl NCBI GeneCards UniProt Show fit	citramalyl-CoA lyase
chrX_-_24027186 Show fit	0.05	ENST00000328046.8	KLHL15 Links Ensembl NCBI GeneCards UniProt Show fit	kelch like family member 15
chr1_-_38873322 Show fit	0.05	ENST00000397572.5 ENST00000494695.4	MYCBP Links Ensembl NCBI GeneCards UniProt Show fit	MYC binding protein
chr2_-_68062974 Show fit	0.05	ENST00000407324.5 ENST00000355848.7 ENST00000410067.8 ENST00000409302.1	C1D Links Ensembl NCBI GeneCards UniProt Show fit	C1D nuclear receptor corepressor
chr1_-_107965009 Show fit	0.04	ENST00000527011.5 ENST00000370056.9	VAV3 Links Ensembl NCBI GeneCards UniProt Show fit	vav guanine nucleotide exchange factor 3
chr5_+_58583068 Show fit	0.04	ENST00000282878.6	RAB3C Links Ensembl NCBI GeneCards UniProt Show fit	RAB3C, member RAS oncogene family
chr22_-_46537593 Show fit	0.04	ENST00000262738.9 ENST00000674500.2	CELSR1 Links Ensembl NCBI GeneCards UniProt Show fit	cadherin EGF LAG seven-pass G-type receptor 1
chr2_+_66435558 Show fit	0.04	ENST00000488550.5	MEIS1 Links Ensembl NCBI GeneCards UniProt Show fit	Meis homeobox 1
chr15_-_49046427 Show fit	0.04	ENST00000261847.7 ENST00000559471.6 ENST00000380927.6 ENST00000559424.1	SECISBP2L Links Ensembl NCBI GeneCards UniProt Show fit	SECIS binding protein 2 like
chr13_+_49997019 Show fit	0.04	ENST00000420995.6 ENST00000356017.8 ENST00000378182.4 ENST00000457662.2	TRIM13 Links Ensembl NCBI GeneCards UniProt Show fit	tripartite motif containing 13
chr5_+_112976757 Show fit	0.04	ENST00000389063.3	DCP2 Links Ensembl NCBI GeneCards UniProt Show fit	decapping mRNA 2
chr12_+_67648737 Show fit	0.04	ENST00000344096.4 ENST00000393555.3	DYRK2 Links Ensembl NCBI GeneCards UniProt Show fit	dual specificity tyrosine phosphorylation regulated kinase 2
chr2_+_119759875 Show fit	0.03	ENST00000263708.7	PTPN4 Links Ensembl NCBI GeneCards UniProt Show fit	protein tyrosine phosphatase non-receptor type 4
chr5_+_55738017 Show fit	0.03	ENST00000514278.6 ENST00000353507.9 ENST00000506511.5 ENST00000505374.6 ENST00000515709.5 ENST00000506848.5 ENST00000514679.5	DDX4 Links Ensembl NCBI GeneCards UniProt Show fit	DEAD-box helicase 4
chr3_-_71725365 Show fit	0.03	ENST00000425534.8	EIF4E3 Links Ensembl NCBI GeneCards UniProt Show fit	eukaryotic translation initiation factor 4E family member 3
chr1_-_225653045 Show fit	0.03	ENST00000366843.6 ENST00000366844.7	ENAH Links Ensembl NCBI GeneCards UniProt Show fit	ENAH actin regulator
chr5_-_115544734 Show fit	0.03	ENST00000274457.5	FEM1C Links Ensembl NCBI GeneCards UniProt Show fit	fem-1 homolog C
chr4_+_158768955 Show fit	0.03	ENST00000264433.11	FNIP2 Links Ensembl NCBI GeneCards UniProt Show fit	folliculin interacting protein 2
chr17_+_60600178 Show fit	0.03	ENST00000629650.2 ENST00000305921.8	PPM1D Links Ensembl NCBI GeneCards UniProt Show fit	protein phosphatase, Mg2+/Mn2+ dependent 1D
chr3_+_61561561 Show fit	0.03	ENST00000474889.6	PTPRG Links Ensembl NCBI GeneCards UniProt Show fit	protein tyrosine phosphatase receptor type G
chr7_+_114414997 Show fit	0.03	ENST00000462331.5 ENST00000393491.7 ENST00000403559.8 ENST00000408937.7 ENST00000393498.6 ENST00000393495.7 ENST00000378237.7	FOXP2 Links Ensembl NCBI GeneCards UniProt Show fit	forkhead box P2
chr10_+_110871903 Show fit	0.03	ENST00000280154.12	PDCD4 Links Ensembl NCBI GeneCards UniProt Show fit	programmed cell death 4
chr3_+_186783567 Show fit	0.03	ENST00000323963.10 ENST00000440191.6	EIF4A2 Links Ensembl NCBI GeneCards UniProt Show fit	eukaryotic translation initiation factor 4A2
chr10_-_26860888 Show fit	0.02	ENST00000376170.8	ABI1 Links Ensembl NCBI GeneCards UniProt Show fit	abl interactor 1
chr5_+_122775062 Show fit	0.02	ENST00000379516.7 ENST00000505934.5 ENST00000514949.1	SNX2 Links Ensembl NCBI GeneCards UniProt Show fit	sorting nexin 2
chr7_-_106661148 Show fit	0.02	ENST00000523505.3	CCDC71L Links Ensembl NCBI GeneCards UniProt Show fit	coiled-coil domain containing 71 like
chr11_-_86955385 Show fit	0.02	ENST00000531380.2	FZD4 Links Ensembl NCBI GeneCards UniProt Show fit	frizzled class receptor 4
chr9_+_79571767 Show fit	0.02	ENST00000376544.7	TLE4 Links Ensembl NCBI GeneCards UniProt Show fit	TLE family member 4, transcriptional corepressor
chr5_-_79991237 Show fit	0.02	ENST00000512560.5 ENST00000509852.6 ENST00000512528.3 ENST00000617335.4	MTX3 Links Ensembl NCBI GeneCards UniProt Show fit	metaxin 3
chr16_+_53054973 Show fit	0.02	ENST00000447540.6 ENST00000615216.4 ENST00000566029.5	CHD9 Links Ensembl NCBI GeneCards UniProt Show fit	chromodomain helicase DNA binding protein 9
chr7_+_107891135 Show fit	0.02	ENST00000639772.1 ENST00000440410.5 ENST00000437604.6 ENST00000205402.10	DLD Links Ensembl NCBI GeneCards UniProt Show fit	dihydrolipoamide dehydrogenase
chr10_-_73495966 Show fit	0.02	ENST00000342558.3 ENST00000360663.10 ENST00000394828.6 ENST00000394829.6	PPP3CB Links Ensembl NCBI GeneCards UniProt Show fit	protein phosphatase 3 catalytic subunit beta
chr7_+_155297776 Show fit	0.02	ENST00000344756.8 ENST00000425172.1 ENST00000340368.9 ENST00000342407.5	INSIG1 Links Ensembl NCBI GeneCards UniProt Show fit	insulin induced gene 1
chr18_-_28177102 Show fit	0.02	ENST00000413878.2 ENST00000269141.8	CDH2 Links Ensembl NCBI GeneCards UniProt Show fit	cadherin 2
chr15_+_56918612 Show fit	0.02	ENST00000438423.6 ENST00000267811.9 ENST00000333725.10 ENST00000559609.5	TCF12 Links Ensembl NCBI GeneCards UniProt Show fit	transcription factor 12
chr1_-_70354673 Show fit	0.02	ENST00000370944.9 ENST00000262346.6	ANKRD13C Links Ensembl NCBI GeneCards UniProt Show fit	ankyrin repeat domain 13C
chr5_-_131796921 Show fit	0.02	ENST00000307968.11 ENST00000307954.12	FNIP1 Links Ensembl NCBI GeneCards UniProt Show fit	folliculin interacting protein 1
chr14_+_105314711 Show fit	0.02	ENST00000447393.6 ENST00000547217.5	PACS2 Links Ensembl NCBI GeneCards UniProt Show fit	phosphofurin acidic cluster sorting protein 2
chr9_+_99105098 Show fit	0.01	ENST00000374990.6 ENST00000374994.9 ENST00000552516.5	TGFBR1 Links Ensembl NCBI GeneCards UniProt Show fit	transforming growth factor beta receptor 1
chr6_-_13711817 Show fit	0.01	ENST00000011619.6	RANBP9 Links Ensembl NCBI GeneCards UniProt Show fit	RAN binding protein 9
chr6_+_37257762 Show fit	0.01	ENST00000373491.3	TBC1D22B Links Ensembl NCBI GeneCards UniProt Show fit	TBC1 domain family member 22B
chr1_+_19596960 Show fit	0.01	ENST00000617872.4 ENST00000322753.7 ENST00000602662.1	MICOS10 Links Ensembl NCBI GeneCards UniProt Show fit NBL1 Links Ensembl NCBI GeneCards UniProt Show fit	mitochondrial contact site and cristae organizing system subunit 10 NBL1, DAN family BMP antagonist
chr2_-_64653906 Show fit	0.01	ENST00000313349.3	SERTAD2 Links Ensembl NCBI GeneCards UniProt Show fit	SERTA domain containing 2
chr4_+_102868963 Show fit	0.01	ENST00000273986.10	CISD2 Links Ensembl NCBI GeneCards UniProt Show fit	CDGSH iron sulfur domain 2
chr1_-_154870264 Show fit	0.01	ENST00000618040.4 ENST00000271915.9	KCNN3 Links Ensembl NCBI GeneCards UniProt Show fit	potassium calcium-activated channel subfamily N member 3
chr3_-_15332526 Show fit	0.01	ENST00000383791.8	SH3BP5 Links Ensembl NCBI GeneCards UniProt Show fit	SH3 domain binding protein 5
chr6_-_99349647 Show fit	0.01	ENST00000389677.6	FAXC Links Ensembl NCBI GeneCards UniProt Show fit	failed axon connections homolog, metaxin like GST domain containing
chr2_+_227164607 Show fit	0.01	ENST00000396578.8	COL4A3 Links Ensembl NCBI GeneCards UniProt Show fit	collagen type IV alpha 3 chain
chr1_-_205813177 Show fit	0.01	ENST00000367137.4	SLC41A1 Links Ensembl NCBI GeneCards UniProt Show fit	solute carrier family 41 member 1
chr7_-_44885446 Show fit	0.01	ENST00000395699.5	PURB Links Ensembl NCBI GeneCards UniProt Show fit	purine rich element binding protein B
chr5_+_144205250 Show fit	0.01	ENST00000507359.3	KCTD16 Links Ensembl NCBI GeneCards UniProt Show fit	potassium channel tetramerization domain containing 16
chr7_-_105388881 Show fit	0.01	ENST00000460391.5 ENST00000393651.8	SRPK2 Links Ensembl NCBI GeneCards UniProt Show fit	SRSF protein kinase 2
chr2_+_42169332 Show fit	0.01	ENST00000402711.6 ENST00000318522.10	EML4 Links Ensembl NCBI GeneCards UniProt Show fit	EMAP like 4
chr17_+_28042660 Show fit	0.01	ENST00000407008.8	NLK Links Ensembl NCBI GeneCards UniProt Show fit	nemo like kinase
chr12_+_71754834 Show fit	0.01	ENST00000261263.5	RAB21 Links Ensembl NCBI GeneCards UniProt Show fit	RAB21, member RAS oncogene family
chr13_-_106568107 Show fit	0.01	ENST00000400198.8	ARGLU1 Links Ensembl NCBI GeneCards UniProt Show fit	arginine and glutamate rich 1
chr15_+_52019206 Show fit	0.01	ENST00000681888.1 ENST00000261845.7 ENST00000680066.1 ENST00000680777.1 ENST00000680652.1	MAPK6 Links Ensembl NCBI GeneCards UniProt Show fit	mitogen-activated protein kinase 6
chr5_+_61332236 Show fit	0.01	ENST00000252744.6	ZSWIM6 Links Ensembl NCBI GeneCards UniProt Show fit	zinc finger SWIM-type containing 6
chr1_+_96721762 Show fit	0.01	ENST00000675735.1 ENST00000609116.5 ENST00000674951.1 ENST00000426398.3 ENST00000370197.5 ENST00000370198.5	PTBP2 Links Ensembl NCBI GeneCards UniProt Show fit	polypyrimidine tract binding protein 2
chr12_-_42144823 Show fit	0.01	ENST00000398675.8	GXYLT1 Links Ensembl NCBI GeneCards UniProt Show fit	glucoside xylosyltransferase 1
chr12_-_92929236 Show fit	0.01	ENST00000322349.13	EEA1 Links Ensembl NCBI GeneCards UniProt Show fit	early endosome antigen 1
chr14_+_103334176 Show fit	0.01	ENST00000560338.5 ENST00000560763.5 ENST00000216554.8	EIF5 Links Ensembl NCBI GeneCards UniProt Show fit	eukaryotic translation initiation factor 5
chr13_+_48975879 Show fit	0.01	ENST00000492622.6	FNDC3A Links Ensembl NCBI GeneCards UniProt Show fit	fibronectin type III domain containing 3A
chr22_+_29883158 Show fit	0.01	ENST00000333027.7 ENST00000401950.7 ENST00000445401.5 ENST00000323630.9 ENST00000351488.7	MTMR3 Links Ensembl NCBI GeneCards UniProt Show fit	myotubularin related protein 3
chr17_-_8630713 Show fit	0.00	ENST00000411957.1 ENST00000360416.8	MYH10 Links Ensembl NCBI GeneCards UniProt Show fit	myosin heavy chain 10
chr16_-_4847265 Show fit	0.00	ENST00000591451.5 ENST00000436648.9 ENST00000321919.14 ENST00000588297.5	GLYR1 Links Ensembl NCBI GeneCards UniProt Show fit	glyoxylate reductase 1 homolog
chr12_-_12267003 Show fit	0.00	ENST00000535731.1 ENST00000261349.9	LRP6 Links Ensembl NCBI GeneCards UniProt Show fit	LDL receptor related protein 6
chr3_+_89107649 Show fit	0.00	ENST00000452448.6 ENST00000494014.1	EPHA3 Links Ensembl NCBI GeneCards UniProt Show fit	EPH receptor A3
chr6_+_104957099 Show fit	0.00	ENST00000345080.5	LIN28B Links Ensembl NCBI GeneCards UniProt Show fit	lin-28 homolog B
chr2_+_176116768 Show fit	0.00	ENST00000249501.5	HOXD10 Links Ensembl NCBI GeneCards UniProt Show fit	homeobox D10
chr17_-_75779758 Show fit	0.00	ENST00000592643.5 ENST00000591890.5 ENST00000587171.1 ENST00000254810.8 ENST00000589599.5	H3-3B Links Ensembl NCBI GeneCards UniProt Show fit	H3.3 histone B
chr10_-_87818153 Show fit	0.00	ENST00000308448.11 ENST00000680024.1	ATAD1 Links Ensembl NCBI GeneCards UniProt Show fit	ATPase family AAA domain containing 1
chr14_-_50231570 Show fit	0.00	ENST00000216373.10	SOS2 Links Ensembl NCBI GeneCards UniProt Show fit	SOS Ras/Rho guanine nucleotide exchange factor 2
chr8_-_66667138 Show fit	0.00	ENST00000310421.5	VCPIP1 Links Ensembl NCBI GeneCards UniProt Show fit	valosin containing protein interacting protein 1
chr18_-_61892997 Show fit	0.00	ENST00000312828.4	RNF152 Links Ensembl NCBI GeneCards UniProt Show fit	ring finger protein 152
chr2_+_124025280 Show fit	0.00	ENST00000431078.1 ENST00000682447.1	CNTNAP5 Links Ensembl NCBI GeneCards UniProt Show fit	contactin associated protein family member 5
chr22_+_21417357 Show fit	0.00	ENST00000407464.7	HIC2 Links Ensembl NCBI GeneCards UniProt Show fit	HIC ZBTB transcriptional repressor 2
chr18_-_24397784 Show fit	0.00	ENST00000399441.4 ENST00000319481.8	OSBPL1A Links Ensembl NCBI GeneCards UniProt Show fit	oxysterol binding protein like 1A

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0035574	histone H4-K20 demethylation(GO:0035574)
0.0	0.1	GO:0060040	retinal bipolar neuron differentiation(GO:0060040)
0.0	0.2	GO:0001886	endothelial cell morphogenesis(GO:0001886)
0.0	0.0	GO:0060448	dichotomous subdivision of terminal units involved in lung branching(GO:0060448)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:1990851	Wnt-Frizzled-LRP5/6 complex(GO:1990851)
0.0	0.1	GO:0000308	cytoplasmic cyclin-dependent protein kinase holoenzyme complex(GO:0000308)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0031849	olfactory receptor binding(GO:0031849)
0.0	0.1	GO:0035575	histone demethylase activity (H4-K20 specific)(GO:0035575)
0.0	0.1	GO:0005499	vitamin D binding(GO:0005499)