Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
ZNF711 | hg38_v1_chrX_+_85243983_85243997, hg38_v1_chrX_+_85244032_85244073 | -0.54 | 2.3e-03 | Click! |
TFAP2D | hg38_v1_chr6_+_50713526_50713526 | -0.49 | 6.2e-03 | Click! |
TFAP2A | hg38_v1_chr6_-_10415043_10415109, hg38_v1_chr6_-_10412367_10412400 | -0.46 | 1.1e-02 | Click! |
Promoter | Score | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_-_180591488 Show fit | 15.86 |
ENST00000292641.4
|
secretoglobin family 3A member 1 |
|
chr5_+_10441857 Show fit | 7.12 |
ENST00000274134.5
|
rhophilin associated tail protein 1 like |
|
chr2_+_131527833 Show fit | 6.94 |
ENST00000295171.10
ENST00000467992.6 ENST00000409856.8 |
coiled-coil domain containing 74A |
|
chr4_-_7042931 Show fit | 6.91 |
ENST00000310085.6
|
coiled-coil domain containing 96 |
|
chr21_-_42496186 Show fit | 6.83 |
ENST00000398352.3
ENST00000291536.8 |
radial spoke head component 1 |
|
chr12_+_49961864 Show fit | 6.75 |
ENST00000293599.7
|
aquaporin 5 |
|
chr16_+_67431112 Show fit | 6.60 |
ENST00000326152.6
|
hydroxysteroid 11-beta dehydrogenase 2 |
|
chr14_+_105486867 Show fit | 5.89 |
ENST00000409393.6
ENST00000392531.4 |
cysteine rich protein 1 |
|
chr1_+_228735431 Show fit | 5.74 |
ENST00000366691.4
|
ras homolog family member U |
|
chr14_+_74019341 Show fit | 5.38 |
ENST00000394009.5
ENST00000464394.5 |
basal body orientation factor 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.2 | 37.3 | GO:0044458 | motile cilium assembly(GO:0044458) |
0.5 | 24.8 | GO:0042073 | intraciliary transport(GO:0042073) |
0.1 | 23.4 | GO:0060271 | cilium morphogenesis(GO:0060271) |
0.7 | 18.8 | GO:0035082 | axoneme assembly(GO:0035082) |
0.7 | 17.1 | GO:0003351 | epithelial cilium movement(GO:0003351) |
0.7 | 15.0 | GO:0070286 | axonemal dynein complex assembly(GO:0070286) |
0.6 | 14.7 | GO:0043508 | negative regulation of JUN kinase activity(GO:0043508) |
1.8 | 14.4 | GO:0072139 | glomerular parietal epithelial cell differentiation(GO:0072139) |
0.5 | 14.0 | GO:1901741 | positive regulation of myoblast fusion(GO:1901741) |
0.3 | 11.4 | GO:0015991 | ATP hydrolysis coupled proton transport(GO:0015991) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 26.3 | GO:0005930 | axoneme(GO:0005930) ciliary plasm(GO:0097014) |
1.0 | 22.8 | GO:0036038 | MKS complex(GO:0036038) |
0.3 | 21.7 | GO:0036064 | ciliary basal body(GO:0036064) |
0.2 | 19.9 | GO:0031514 | motile cilium(GO:0031514) |
0.0 | 14.1 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
0.4 | 12.9 | GO:0032391 | photoreceptor connecting cilium(GO:0032391) |
0.8 | 12.8 | GO:0001520 | outer dense fiber(GO:0001520) |
0.2 | 12.7 | GO:0009925 | basal plasma membrane(GO:0009925) |
0.1 | 11.6 | GO:0035577 | azurophil granule membrane(GO:0035577) |
0.1 | 11.0 | GO:0070469 | respiratory chain(GO:0070469) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 40.5 | GO:0003677 | DNA binding(GO:0003677) |
0.6 | 19.5 | GO:0019198 | transmembrane receptor protein tyrosine phosphatase activity(GO:0005001) transmembrane receptor protein phosphatase activity(GO:0019198) |
0.0 | 14.6 | GO:0004842 | ubiquitin-protein transferase activity(GO:0004842) |
0.9 | 13.5 | GO:0005007 | fibroblast growth factor-activated receptor activity(GO:0005007) |
3.1 | 12.3 | GO:0032567 | dGTPase activity(GO:0008832) triphosphoric monoester hydrolase activity(GO:0016793) guanyl deoxyribonucleotide binding(GO:0032560) dGTP binding(GO:0032567) |
0.1 | 12.0 | GO:0004402 | histone acetyltransferase activity(GO:0004402) |
0.6 | 11.6 | GO:0070411 | I-SMAD binding(GO:0070411) |
0.8 | 11.0 | GO:0097371 | MDM2/MDM4 family protein binding(GO:0097371) |
0.0 | 10.7 | GO:0003924 | GTPase activity(GO:0003924) |
0.3 | 9.5 | GO:0019706 | protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 19.0 | WNT SIGNALING | Genes related to Wnt-mediated signal transduction |
0.2 | 17.3 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
0.1 | 12.2 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.2 | 12.1 | PID BMP PATHWAY | BMP receptor signaling |
0.3 | 10.3 | PID BETA CATENIN DEG PATHWAY | Degradation of beta catenin |
0.4 | 8.4 | PID ALK2 PATHWAY | ALK2 signaling events |
0.2 | 7.7 | PID MYC PATHWAY | C-MYC pathway |
0.2 | 6.9 | ST GRANULE CELL SURVIVAL PATHWAY | Granule Cell Survival Pathway is a specific case of more general PAC1 Receptor Pathway. |
0.1 | 6.9 | PID ARF6 PATHWAY | Arf6 signaling events |
0.1 | 6.8 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 31.1 | REACTOME GENERIC TRANSCRIPTION PATHWAY | Genes involved in Generic Transcription Pathway |
0.3 | 19.1 | REACTOME IRON UPTAKE AND TRANSPORT | Genes involved in Iron uptake and transport |
0.2 | 16.5 | REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION | Genes involved in NOTCH1 Intracellular Domain Regulates Transcription |
0.2 | 14.7 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.1 | 10.8 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.1 | 8.4 | REACTOME REGULATION OF ORNITHINE DECARBOXYLASE ODC | Genes involved in Regulation of ornithine decarboxylase (ODC) |
0.3 | 8.1 | REACTOME SYNTHESIS OF GLYCOSYLPHOSPHATIDYLINOSITOL GPI | Genes involved in Synthesis of glycosylphosphatidylinositol (GPI) |
0.1 | 8.1 | REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES | Genes involved in Loss of Nlp from mitotic centrosomes |
0.6 | 7.8 | REACTOME ETHANOL OXIDATION | Genes involved in Ethanol oxidation |
0.2 | 7.7 | REACTOME G1 S SPECIFIC TRANSCRIPTION | Genes involved in G1/S-Specific Transcription |