hg38_v1_chr19_-_50953063_50953066	2.09097	GLI3	ENST00000391809.6|KLK5|ENSG00000167754.13|kallikrein related peptidase 5
hg38_v1_chr19_-_50953093_50953108	2.07971	GLI3	ENST00000593428.5|KLK5|ENSG00000167754.13|kallikrein related peptidase 5
hg38_v1_chr1_+_150549734_150549839	2.07077	GLI3	ENST00000674043.1|ADAMTSL4|ENSG00000143382.16|ADAMTS like 4	ENST00000674058.1|ADAMTSL4|ENSG00000143382.16|ADAMTS like 4
hg38_v1_chr18_+_23949847_23949893	2.06618	GLI3	ENST00000588004.1|LAMA3|ENSG00000053747.17|laminin subunit alpha 3
hg38_v1_chr19_-_50952942_50953044	2.03802	GLI3	ENST00000594846.1|KLK5|ENSG00000167754.13|kallikrein related peptidase 5	ENST00000336334.8|KLK5|ENSG00000167754.13|kallikrein related peptidase 5
hg38_v1_chr1_+_150549369_150549379	1.9821	GLI3	ENST00000369039.9|ADAMTSL4|ENSG00000143382.16|ADAMTS like 4
hg38_v1_chr1_+_150549384_150549425	1.95374	GLI3	ENST00000369041.9|ADAMTSL4|ENSG00000143382.16|ADAMTS like 4	ENST00000271643.9|ADAMTSL4|ENSG00000143382.16|ADAMTS like 4
hg38_v1_chr10_+_86958557_86958631	1.85403	GLI3	ENST00000372017.4|SNCG|ENSG00000173267.14|synuclein gamma	ENST00000348795.8|SNCG|ENSG00000173267.14|synuclein gamma
hg38_v1_chr19_-_50968775_50968791	1.44627	GLI3	ENST00000391808.5|KLK6|ENSG00000167755.15|kallikrein related peptidase 6
hg38_v1_chr20_+_63696643_63696660	1.30608	GLI3	ENST00000369996.3|TNFRSF6B|ENSG00000243509.6|TNF receptor superfamily member 6b
hg38_v1_chr13_-_20232303_20232365	1.30375	GLI3	ENST00000400065.7|GJB6|ENSG00000121742.19|gap junction protein beta 6	ENST00000643121.1|GJB6|ENSG00000121742.19|gap junction protein beta 6	ENST00000647029.1|GJB6|ENSG00000121742.19|gap junction protein beta 6	ENST00000643211.1|GJB6|ENSG00000121742.19|gap junction protein beta 6	ENST00000400066.8|GJB6|ENSG00000121742.19|gap junction protein beta 6	ENST00000644283.1|GJB6|ENSG00000121742.19|gap junction protein beta 6
hg38_v1_chr11_+_69294107_69294181	1.2073	GLI3	ENST00000441339.3|MYEOV|ENSG00000172927.8|myeloma overexpressed	ENST00000308946.3|MYEOV|ENSG00000172927.8|myeloma overexpressed	ENST00000535407.1|MYEOV|ENSG00000172927.8|myeloma overexpressed
hg38_v1_chr1_+_183186238_183186271	1.13456	GLI3	ENST00000493293.5|LAMC2|ENSG00000058085.15|laminin subunit gamma 2	ENST00000264144.5|LAMC2|ENSG00000058085.15|laminin subunit gamma 2
hg38_v1_chr6_-_46735351_46735409	1.08025	GLI3	ENST00000274793.12|PLA2G7|ENSG00000146070.17|phospholipase A2 group VII
hg38_v1_chr21_-_26845402_26845416	1.06976	GLI3	ENST00000284984.8|ADAMTS1|ENSG00000154734.16|ADAM metallopeptidase with thrombospondin type 1 motif 1	ENST00000676955.1|ADAMTS1|ENSG00000154734.16|ADAM metallopeptidase with thrombospondin type 1 motif 1
hg38_v1_chr1_-_16978276_16978326	1.06637	GLI3	ENST00000375534.7|MFAP2|ENSG00000117122.14|microfibril associated protein 2
hg38_v1_chr1_-_152414256_152414269	1.06305	GLI3	ENST00000271835.3|CRNN|ENSG00000143536.7|cornulin
hg38_v1_chr21_-_26843012_26843029	1.02558	GLI3	ENST00000517777.6|ADAMTS1|ENSG00000154734.16|ADAM metallopeptidase with thrombospondin type 1 motif 1
hg38_v1_chr20_-_35292415_35292431	1.02503	GLI3	ENST00000374408.4|FAM83C|ENSG00000125998.8|family with sequence similarity 83 member C
hg38_v1_chr21_-_26843063_26843075	1.00845	GLI3	ENST00000678221.1|ADAMTS1|ENSG00000154734.16|ADAM metallopeptidase with thrombospondin type 1 motif 1
hg38_v1_chr6_-_46735693_46735727	0.988782	GLI3	ENST00000537365.1|PLA2G7|ENSG00000146070.17|phospholipase A2 group VII
hg38_v1_chr1_-_25906457_25906469	0.98601	GLI3	ENST00000426559.6|STMN1|ENSG00000117632.23|stathmin 1
hg38_v1_chr20_-_23988779_23988779	0.974932	GLI3	ENST00000335694.4|GGTLC1|ENSG00000149435.12|gamma-glutamyltransferase light chain 1
hg38_v1_chrX_+_153179276_153179292	0.96789	GLI3	ENST00000356661.7|MAGEA1|ENSG00000198681.7|MAGE family member A1
hg38_v1_chr19_+_676385_676403	0.936545	GLI3	ENST00000166139.9|FSTL3|ENSG00000070404.10|follistatin like 3
hg38_v1_chr6_-_105179952_105180041	0.93604	GLI3	ENST00000254765.4|POPDC3|ENSG00000132429.10|popeye domain containing 3
hg38_v1_chr13_-_60163869_60163967	0.92913	GLI3	ENST00000400324.9|DIAPH3|ENSG00000139734.19|diaphanous related formin 3
hg38_v1_chr22_+_31093358_31093385	0.892079	GLI3	ENST00000404574.5|SMTN|ENSG00000183963.19|smoothelin
hg38_v1_chr15_+_85380625_85380654	0.889177	GLI3	ENST00000560302.5|AKAP13|ENSG00000170776.22|A-kinase anchoring protein 13
hg38_v1_chr6_-_109455698_109455792	0.885435	GLI3	ENST00000431946.1|MICAL1|ENSG00000135596.18|microtubule associated monooxygenase, calponin and LIM domain containing 1	ENST00000358577.7|MICAL1|ENSG00000135596.18|microtubule associated monooxygenase, calponin and LIM domain containing 1	ENST00000358807.8|MICAL1|ENSG00000135596.18|microtubule associated monooxygenase, calponin and LIM domain containing 1
hg38_v1_chr1_+_65525641_65525734	0.866811	GLI3	ENST00000344610.12|LEPR|ENSG00000116678.20|leptin receptor	ENST00000616738.4|LEPR|ENSG00000116678.20|leptin receptor
hg38_v1_chr19_-_18941184_18941264	0.855881	GLI3	ENST00000594794.5|HOMER3|ENSG00000051128.19|homer scaffold protein 3	ENST00000392351.8|HOMER3|ENSG00000051128.19|homer scaffold protein 3	ENST00000596482.5|HOMER3|ENSG00000051128.19|homer scaffold protein 3
hg38_v1_chrX_-_15675012_15675110	0.834394	GLI3	ENST00000650271.1|CLTRN|ENSG00000147003.7|collectrin, amino acid transport regulator
hg38_v1_chr7_-_41703062_41703097	0.766283	GLI3	ENST00000242208.5|INHBA|ENSG00000122641.11|inhibin subunit beta A
hg38_v1_chr21_-_46184404_46184476	0.764664	GLI3	ENST00000291672.6|SPATC1L|ENSG00000160284.15|spermatogenesis and centriole associated 1 like	ENST00000330205.10|SPATC1L|ENSG00000160284.15|spermatogenesis and centriole associated 1 like
hg38_v1_chr3_-_139539679_139539829	0.758424	GLI3	ENST00000483943.6|RBP1|ENSG00000114115.10|retinol binding protein 1	ENST00000672186.1|RBP1|ENSG00000114115.10|retinol binding protein 1	ENST00000232219.6|RBP1|ENSG00000114115.10|retinol binding protein 1	ENST00000617459.4|RBP1|ENSG00000114115.10|retinol binding protein 1	ENST00000492918.1|RBP1|ENSG00000114115.10|retinol binding protein 1
hg38_v1_chr19_-_51065067_51065114	0.757601	GLI3	ENST00000595547.5|KLK13|ENSG00000167759.13|kallikrein related peptidase 13	ENST00000335422.3|KLK13|ENSG00000167759.13|kallikrein related peptidase 13	ENST00000595793.6|KLK13|ENSG00000167759.13|kallikrein related peptidase 13	ENST00000596955.1|KLK13|ENSG00000167759.13|kallikrein related peptidase 13
hg38_v1_chr19_+_2096937_2096951	0.750589	GLI3	ENST00000395296.5|IZUMO4|ENSG00000099840.14|IZUMO family member 4
hg38_v1_chr15_+_90184912_90184981	0.736496	GLI3	ENST00000561085.1|SEMA4B|ENSG00000185033.14|semaphorin 4B	ENST00000332496.10|SEMA4B|ENSG00000185033.14|semaphorin 4B
hg38_v1_chr12_-_52452139_52452154	0.731096	GLI3	ENST00000252252.4|KRT6B|ENSG00000185479.6|keratin 6B
hg38_v1_chr3_-_150703889_150703937	0.728781	GLI3	ENST00000295910.11|ERICH6|ENSG00000163645.15|glutamate rich 6	ENST00000474463.5|ERICH6|ENSG00000163645.15|glutamate rich 6
hg38_v1_chr19_+_2096873_2096931	0.727917	GLI3	ENST00000395307.6|IZUMO4|ENSG00000099840.14|IZUMO family member 4	ENST00000395301.8|IZUMO4|ENSG00000099840.14|IZUMO family member 4	ENST00000620263.4|IZUMO4|ENSG00000099840.14|IZUMO family member 4
hg38_v1_chr21_-_43659460_43659520	0.723823	GLI3	ENST00000443485.1|HSF2BP|ENSG00000160207.9|heat shock transcription factor 2 binding protein	ENST00000291560.7|HSF2BP|ENSG00000160207.9|heat shock transcription factor 2 binding protein
hg38_v1_chr14_-_106374129_106374145	0.721678	GLI3	ENST00000390616.2|IGHV4-34|ENSG00000211956.2|immunoglobulin heavy variable 4-34
hg38_v1_chr3_+_102099244_102099244	0.712745	GLI3	ENST00000491959.5|ZPLD1|ENSG00000170044.9|zona pellucida like domain containing 1
hg38_v1_chr19_-_11577632_11577671	0.710797	GLI3	ENST00000590420.1|ACP5|ENSG00000102575.13|acid phosphatase 5, tartrate resistant	ENST00000648477.1|ACP5|ENSG00000102575.13|acid phosphatase 5, tartrate resistant
hg38_v1_chr6_-_132763424_132763466	0.710299	GLI3	ENST00000532012.1|VNN2|ENSG00000112303.14|vanin 2	ENST00000525270.5|VNN2|ENSG00000112303.14|vanin 2	ENST00000530536.5|VNN2|ENSG00000112303.14|vanin 2	ENST00000524919.5|VNN2|ENSG00000112303.14|vanin 2
hg38_v1_chr2_-_68467272_68467302	0.701089	GLI3	ENST00000377957.4|FBXO48|ENSG00000204923.4|F-box protein 48
hg38_v1_chr3_+_136819069_136819161	0.696309	GLI3	ENST00000393079.3|SLC35G2|ENSG00000168917.9|solute carrier family 35 member G2	ENST00000446465.3|SLC35G2|ENSG00000168917.9|solute carrier family 35 member G2
hg38_v1_chr19_+_44914833_44914872	0.683208	GLI3	ENST00000589078.1|APOC1|ENSG00000130208.10|apolipoprotein C1	ENST00000586638.5|APOC1|ENSG00000130208.10|apolipoprotein C1
hg38_v1_chr6_+_31403553_31403672	0.679236	GLI3	ENST00000449934.7|MICA|ENSG00000204520.14|MHC class I polypeptide-related sequence A	ENST00000421350.1|MICA|ENSG00000204520.14|MHC class I polypeptide-related sequence A
hg38_v1_chr9_+_35673917_35673955	0.669424	GLI3	ENST00000617161.1|CA9|ENSG00000107159.13|carbonic anhydrase 9	ENST00000378357.9|CA9|ENSG00000107159.13|carbonic anhydrase 9
hg38_v1_chr12_-_54419259_54419272	0.668692	GLI3	ENST00000293379.9|ITGA5|ENSG00000161638.11|integrin subunit alpha 5
hg38_v1_chr19_-_51019699_51019716	0.668111	GLI3	ENST00000358789.8|KLK10|ENSG00000129451.12|kallikrein related peptidase 10
hg38_v1_chr5_+_168529299_168529351	0.666242	GLI3	ENST00000338333.5|FBLL1|ENSG00000188573.8|fibrillarin like 1
hg38_v1_chr8_-_66613229_66613309	0.659862	GLI3	ENST00000517885.5|MYBL1|ENSG00000185697.17|MYB proto-oncogene like 1
hg38_v1_chr12_+_13196718_13196733	0.657445	GLI3	ENST00000431267.2|EMP1|ENSG00000134531.10|epithelial membrane protein 1	ENST00000542474.5|EMP1|ENSG00000134531.10|epithelial membrane protein 1	ENST00000544053.5|EMP1|ENSG00000134531.10|epithelial membrane protein 1	ENST00000256951.10|EMP1|ENSG00000134531.10|epithelial membrane protein 1
hg38_v1_chr12_+_57460127_57460151	0.655942	GLI3	ENST00000532291.5|GLI1|ENSG00000111087.10|GLI family zinc finger 1	ENST00000543426.5|GLI1|ENSG00000111087.10|GLI family zinc finger 1	ENST00000546141.5|GLI1|ENSG00000111087.10|GLI family zinc finger 1
hg38_v1_chr7_-_23470469_23470499	0.655772	GLI3	ENST00000258729.8|IGF2BP3|ENSG00000136231.14|insulin like growth factor 2 mRNA binding protein 3
hg38_v1_chr5_-_39270623_39270669	0.6545	GLI3	ENST00000512138.1|FYB1|ENSG00000082074.19|FYN binding protein 1	ENST00000646045.2|FYB1|ENSG00000082074.19|FYN binding protein 1
hg38_v1_chr1_+_70411241_70411383	0.644998	GLI3	ENST00000370938.8|CTH|ENSG00000116761.12|cystathionine gamma-lyase	ENST00000346806.2|CTH|ENSG00000116761.12|cystathionine gamma-lyase
hg38_v1_chr12_+_57459782_57459796	0.644841	GLI3	ENST00000228682.7|GLI1|ENSG00000111087.10|GLI family zinc finger 1
hg38_v1_chr7_-_128405930_128405973	0.640192	GLI3	ENST00000470772.5|IMPDH1|ENSG00000106348.18|inosine monophosphate dehydrogenase 1	ENST00000480861.5|IMPDH1|ENSG00000106348.18|inosine monophosphate dehydrogenase 1	ENST00000496200.5|IMPDH1|ENSG00000106348.18|inosine monophosphate dehydrogenase 1
hg38_v1_chr1_-_8026283_8026317	0.634463	GLI3	ENST00000474874.5|ERRFI1|ENSG00000116285.13|ERBB receptor feedback inhibitor 1	ENST00000469499.5|ERRFI1|ENSG00000116285.13|ERBB receptor feedback inhibitor 1	ENST00000377482.10|ERRFI1|ENSG00000116285.13|ERBB receptor feedback inhibitor 1
hg38_v1_chr12_+_4269771_4269791	0.630523	GLI3	ENST00000676411.1|CCND2|ENSG00000118971.9|cyclin D2
hg38_v1_chr10_-_132331818_132331864	0.613421	GLI3	ENST00000368619.3|STK32C|ENSG00000165752.17|serine/threonine kinase 32C	ENST00000456004.1|STK32C|ENSG00000165752.17|serine/threonine kinase 32C	ENST00000368620.2|STK32C|ENSG00000165752.17|serine/threonine kinase 32C
hg38_v1_chr3_-_197029775_197029854	0.612666	GLI3	ENST00000439320.1|MELTF|ENSG00000163975.12|melanotransferrin	ENST00000296351.8|MELTF|ENSG00000163975.12|melanotransferrin	ENST00000296350.10|MELTF|ENSG00000163975.12|melanotransferrin
hg38_v1_chr10_+_17228215_17228248	0.610454	GLI3	ENST00000544301.7|VIM|ENSG00000026025.16|vimentin
hg38_v1_chr10_+_5524953_5524969	0.608889	GLI3	ENST00000315238.3|CALML3|ENSG00000178363.5|calmodulin like 3
hg38_v1_chr19_-_41353044_41353100	0.606656	GLI3	ENST00000600196.2|TGFB1|ENSG00000105329.11|transforming growth factor beta 1	ENST00000677934.1|TGFB1|ENSG00000105329.11|transforming growth factor beta 1
hg38_v1_chrX_+_136536099_136536195	0.601186	GLI3	ENST00000440515.5|VGLL1|ENSG00000102243.13|vestigial like family member 1	ENST00000456412.1|VGLL1|ENSG00000102243.13|vestigial like family member 1
hg38_v1_chr14_+_75002903_75002987	0.59689	GLI3	ENST00000266126.10|EIF2B2|ENSG00000119718.11|eukaryotic translation initiation factor 2B subunit beta
hg38_v1_chr11_-_65900375_65900397	0.594847	GLI3	ENST00000312562.7|FOSL1|ENSG00000175592.9|FOS like 1, AP-1 transcription factor subunit
hg38_v1_chr12_-_124863783_124863873	0.593497	GLI3	ENST00000546215.5|SCARB1|ENSG00000073060.17|scavenger receptor class B member 1	ENST00000415380.6|SCARB1|ENSG00000073060.17|scavenger receptor class B member 1	ENST00000545493.1|SCARB1|ENSG00000073060.17|scavenger receptor class B member 1	ENST00000261693.11|SCARB1|ENSG00000073060.17|scavenger receptor class B member 1	ENST00000680596.1|SCARB1|ENSG00000073060.17|scavenger receptor class B member 1
hg38_v1_chr17_-_78925376_78925398	0.592804	GLI3	ENST00000262768.11|TIMP2|ENSG00000035862.12|TIMP metallopeptidase inhibitor 2
hg38_v1_chr14_+_104745960_104746056	0.592277	GLI3	ENST00000556623.1|ADSS1|ENSG00000185100.11|adenylosuccinate synthase 1	ENST00000555674.1|ADSS1|ENSG00000185100.11|adenylosuccinate synthase 1
hg38_v1_chr9_-_112175264_112175279	0.570361	GLI3	ENST00000374264.6|SUSD1|ENSG00000106868.17|sushi domain containing 1
hg38_v1_chr2_-_240140649_240140665	0.563802	GLI3	ENST00000319460.2|OTOS|ENSG00000178602.8|otospiralin
hg38_v1_chr7_-_38330935_38330990	0.562453	GLI3	ENST00000390343.2|TRGV8|ENSG00000211696.2|T cell receptor gamma variable 8
hg38_v1_chr17_+_62627628_62627752	0.558104	GLI3	ENST00000303375.10|MRC2|ENSG00000011028.14|mannose receptor C type 2
hg38_v1_chr20_+_3796288_3796317	0.552667	GLI3	ENST00000439880.6|CDC25B|ENSG00000101224.18|cell division cycle 25B	ENST00000245960.10|CDC25B|ENSG00000101224.18|cell division cycle 25B
hg38_v1_chr1_+_70411180_70411238	0.552504	GLI3	ENST00000411986.6|CTH|ENSG00000116761.12|cystathionine gamma-lyase
hg38_v1_chr1_-_6360677_6360720	0.543577	GLI3	ENST00000377845.7|ACOT7|ENSG00000097021.20|acyl-CoA thioesterase 7
hg38_v1_chr11_+_117200188_117200255	0.541861	GLI3	ENST00000529792.5|TAGLN|ENSG00000149591.17|transgelin
hg38_v1_chr11_-_61878582_61878641	0.53292	GLI3	ENST00000527379.5|FADS3|ENSG00000221968.9|fatty acid desaturase 3
hg38_v1_chr19_+_44914588_44914613	0.530377	GLI3	ENST00000592535.6|APOC1|ENSG00000130208.10|apolipoprotein C1
hg38_v1_chr16_+_31472130_31472208	0.529504	GLI3	ENST00000394863.8|TGFB1I1|ENSG00000140682.19|transforming growth factor beta 1 induced transcript 1	ENST00000565360.5|TGFB1I1|ENSG00000140682.19|transforming growth factor beta 1 induced transcript 1	ENST00000361773.7|TGFB1I1|ENSG00000140682.19|transforming growth factor beta 1 induced transcript 1
hg38_v1_chr8_+_123182635_123182681	0.529327	GLI3	ENST00000276699.10|FAM83A|ENSG00000147689.16|family with sequence similarity 83 member A	ENST00000522648.5|FAM83A|ENSG00000147689.16|family with sequence similarity 83 member A
hg38_v1_chr9_+_87498491_87498535	0.526781	GLI3	ENST00000622514.4|DAPK1|ENSG00000196730.13|death associated protein kinase 1
hg38_v1_chr17_-_78903193_78903219	0.522789	GLI3	ENST00000322630.3|CEP295NL|ENSG00000178404.10|CEP295 N-terminal like	ENST00000586713.5|CEP295NL|ENSG00000178404.10|CEP295 N-terminal like
hg38_v1_chr1_+_1001002_1001145	0.522558	GLI3	ENST00000624697.4|ISG15|ENSG00000187608.10|ISG15 ubiquitin like modifier	ENST00000624652.1|ISG15|ENSG00000187608.10|ISG15 ubiquitin like modifier
hg38_v1_chr12_-_13095664_13095696	0.521681	GLI3	ENST00000337630.10|GSG1|ENSG00000111305.19|germ cell associated 1	ENST00000545699.1|GSG1|ENSG00000111305.19|germ cell associated 1
hg38_v1_chr14_-_106627685_106627825	0.519729	GLI3	ENST00000390629.3|IGHV4-59|ENSG00000224373.3|immunoglobulin heavy variable 4-59
hg38_v1_chr17_-_35795592_35795707	0.518414	GLI3	ENST00000615136.4|MMP28|ENSG00000271447.6|matrix metallopeptidase 28	ENST00000605424.6|MMP28|ENSG00000271447.6|matrix metallopeptidase 28	ENST00000612672.1|MMP28|ENSG00000271447.6|matrix metallopeptidase 28
hg38_v1_chr2_-_207167220_207167267	0.51563	GLI3	ENST00000421199.5|KLF7|ENSG00000118263.15|Kruppel like factor 7	ENST00000457962.5|KLF7|ENSG00000118263.15|Kruppel like factor 7
hg38_v1_chr19_-_43198079_43198274	0.513258	GLI3	ENST00000597374.5|PSG4|ENSG00000243137.8|pregnancy specific beta-1-glycoprotein 4	ENST00000599371.1|PSG4|ENSG00000243137.8|pregnancy specific beta-1-glycoprotein 4
hg38_v1_chr8_+_144148027_144148046	0.512424	GLI3	ENST00000423230.6|MROH1|ENSG00000179832.18|maestro heat like repeat family member 1
hg38_v1_chr13_-_20192928_20192944	0.512357	GLI3	ENST00000382848.5|GJB2|ENSG00000165474.8|gap junction protein beta 2
hg38_v1_chr19_+_44914702_44914713	0.504559	GLI3	ENST00000592885.5|APOC1|ENSG00000130208.10|apolipoprotein C1	ENST00000589781.1|APOC1|ENSG00000130208.10|apolipoprotein C1
hg38_v1_chr19_-_11578937_11578986	0.500962	GLI3	ENST00000592659.1|ACP5|ENSG00000102575.13|acid phosphatase 5, tartrate resistant	ENST00000592828.6|ACP5|ENSG00000102575.13|acid phosphatase 5, tartrate resistant	ENST00000218758.9|ACP5|ENSG00000102575.13|acid phosphatase 5, tartrate resistant	ENST00000412435.6|ACP5|ENSG00000102575.13|acid phosphatase 5, tartrate resistant
hg38_v1_chr17_+_41812974_41813013	0.499759	GLI3	ENST00000321562.9|FKBP10|ENSG00000141756.19|FKBP prolyl isomerase 10
hg38_v1_chr5_+_136028979_136029001	0.49658	GLI3	ENST00000442011.7|TGFBI|ENSG00000120708.17|transforming growth factor beta induced
hg38_v1_chr19_+_41354145_41354180	0.495234	GLI3	ENST00000604123.5|TMEM91|ENSG00000142046.15|transmembrane protein 91
hg38_v1_chr19_-_20661507_20661546	0.492535	GLI3	ENST00000612591.4|ZNF626|ENSG00000188171.16|zinc finger protein 626	ENST00000595405.1|ZNF626|ENSG00000188171.16|zinc finger protein 626
hg38_v1_chr20_-_45791865_45791891	0.485258	GLI3	ENST00000243938.9|WFDC3|ENSG00000124116.19|WAP four-disulfide core domain 3
hg38_v1_chr20_-_1325707_1325723	0.483016	GLI3	ENST00000381812.5|SDCBP2|ENSG00000125775.15|syndecan binding protein 2
hg38_v1_chr20_+_44714853_44714939	0.480866	GLI3	ENST00000372865.4|CCN5|ENSG00000064205.11|cellular communication network factor 5
hg38_v1_chr6_+_24775413_24775482	0.479134	GLI3	ENST00000378054.6|GMNN|ENSG00000112312.10|geminin DNA replication inhibitor	ENST00000620958.4|GMNN|ENSG00000112312.10|geminin DNA replication inhibitor	ENST00000476555.5|GMNN|ENSG00000112312.10|geminin DNA replication inhibitor
hg38_v1_chr11_-_65900413_65900424	0.476082	GLI3	ENST00000448083.6|FOSL1|ENSG00000175592.9|FOS like 1, AP-1 transcription factor subunit	ENST00000531493.5|FOSL1|ENSG00000175592.9|FOS like 1, AP-1 transcription factor subunit	ENST00000532401.1|FOSL1|ENSG00000175592.9|FOS like 1, AP-1 transcription factor subunit
hg38_v1_chr22_+_50481515_50481561	0.473971	GLI3	ENST00000395737.2|ADM2|ENSG00000128165.9|adrenomedullin 2	ENST00000395738.2|ADM2|ENSG00000128165.9|adrenomedullin 2
hg38_v1_chr1_+_27879638_27879731	0.47318	GLI3	ENST00000456990.1|THEMIS2|ENSG00000130775.16|thymocyte selection associated family member 2
hg38_v1_chr10_-_48493641_48493656	0.468574	GLI3	ENST00000417247.6|ARHGAP22|ENSG00000128805.15|Rho GTPase activating protein 22
hg38_v1_chr19_+_33132090_33132120	0.46698	GLI3	ENST00000592765.5|WDR88|ENSG00000166359.11|WD repeat domain 88	ENST00000361680.6|WDR88|ENSG00000166359.11|WD repeat domain 88	ENST00000355868.4|WDR88|ENSG00000166359.11|WD repeat domain 88
hg38_v1_chr9_-_112175283_112175375	0.464884	GLI3	ENST00000374270.8|SUSD1|ENSG00000106868.17|sushi domain containing 1	ENST00000374263.7|SUSD1|ENSG00000106868.17|sushi domain containing 1
hg38_v1_chr19_-_38735405_38735431	0.464011	GLI3	ENST00000597987.5|CAPN12|ENSG00000182472.9|calpain 12	ENST00000595177.1|CAPN12|ENSG00000182472.9|calpain 12
hg38_v1_chr5_+_271637_271686	0.461482	GLI3	ENST00000264933.9|PDCD6|ENSG00000249915.8|programmed cell death 6	ENST00000505221.5|PDCD6|ENSG00000249915.8|programmed cell death 6	ENST00000509581.5|PDCD6|ENSG00000249915.8|programmed cell death 6	ENST00000507528.5|PDCD6|ENSG00000249915.8|programmed cell death 6
hg38_v1_chr1_-_204152010_204152051	0.458641	GLI3	ENST00000367202.9|ETNK2|ENSG00000143845.15|ethanolamine kinase 2
hg38_v1_chr7_+_77537258_77537355	0.458421	GLI3	ENST00000248594.11|PTPN12|ENSG00000127947.16|protein tyrosine phosphatase non-receptor type 12
hg38_v1_chr6_+_26204552_26204617	0.454867	GLI3	ENST00000615164.2|H4C5|ENSG00000276966.2|H4 clustered histone 5
hg38_v1_chr14_+_23630109_23630124	0.453019	GLI3	ENST00000432832.6|DHRS2|ENSG00000100867.15|dehydrogenase/reductase 2
hg38_v1_chr3_-_139480723_139480772	0.450904	GLI3	ENST00000511956.1|RBP2|ENSG00000114113.6|retinol binding protein 2	ENST00000506825.1|RBP2|ENSG00000114113.6|retinol binding protein 2
hg38_v1_chrX_-_154374623_154374645	0.449005	GLI3	ENST00000369850.10|FLNA|ENSG00000196924.19|filamin A
hg38_v1_chr19_+_2096960_2097009	0.447529	GLI3	ENST00000588003.5|IZUMO4|ENSG00000099840.14|IZUMO family member 4
hg38_v1_chr20_+_44714835_44714847	0.445809	GLI3	ENST00000372868.6|CCN5|ENSG00000064205.11|cellular communication network factor 5
hg38_v1_chr2_+_219627394_219627428	0.444662	GLI3	ENST00000373760.6|SLC4A3|ENSG00000114923.17|solute carrier family 4 member 3
hg38_v1_chr14_-_106154113_106154163	0.441033	GLI3	ENST00000390603.2|IGHV3-15|ENSG00000211943.2|immunoglobulin heavy variable 3-15
hg38_v1_chr14_-_106593319_106593347	0.438656	GLI3	ENST00000390627.3|IGHV3-53|ENSG00000211967.3|immunoglobulin heavy variable 3-53
hg38_v1_chrX_+_49303669_49303669	0.438111	GLI3	ENST00000407599.3|GAGE10|ENSG00000215274.5|G antigen 10
hg38_v1_chr9_-_136996555_136996575	0.437469	GLI3	ENST00000494426.2|CLIC3|ENSG00000169583.13|chloride intracellular channel 3
hg38_v1_chr11_-_111912871_111912927	0.436195	GLI3	ENST00000528628.5|CRYAB|ENSG00000109846.9|crystallin alpha B
hg38_v1_chr11_+_57598184_57598275	0.434192	GLI3	ENST00000677625.1|SERPING1|ENSG00000149131.17|serpin family G member 1	ENST00000676670.1|SERPING1|ENSG00000149131.17|serpin family G member 1
hg38_v1_chr11_+_70085413_70085459	0.433044	GLI3	ENST00000316296.9|ANO1|ENSG00000131620.17|anoctamin 1	ENST00000530676.5|ANO1|ENSG00000131620.17|anoctamin 1
hg38_v1_chr16_-_84504612_84504683	0.430297	GLI3	ENST00000562447.5|MEAK7|ENSG00000140950.16|MTOR associated protein, eak-7 homolog	ENST00000343629.11|MEAK7|ENSG00000140950.16|MTOR associated protein, eak-7 homolog	ENST00000565765.1|MEAK7|ENSG00000140950.16|MTOR associated protein, eak-7 homolog
hg38_v1_chr11_-_627173_627187	0.42935	GLI3	ENST00000176195.4|SCT|ENSG00000070031.4|secretin
hg38_v1_chr21_+_44939992_44940047	0.425784	GLI3	ENST00000397826.7|FAM207A|ENSG00000160256.13|family with sequence similarity 207 member A	ENST00000458015.1|FAM207A|ENSG00000160256.13|family with sequence similarity 207 member A	ENST00000291634.11|FAM207A|ENSG00000160256.13|family with sequence similarity 207 member A
hg38_v1_chr16_+_30183595_30183634	0.425503	GLI3	ENST00000219150.10|CORO1A|ENSG00000102879.16|coronin 1A	ENST00000570045.5|CORO1A|ENSG00000102879.16|coronin 1A	ENST00000565497.5|CORO1A|ENSG00000102879.16|coronin 1A	ENST00000570244.5|CORO1A|ENSG00000102879.16|coronin 1A
hg38_v1_chr17_+_7307579_7307601	0.42476	GLI3	ENST00000572815.5|EIF5A|ENSG00000132507.18|eukaryotic translation initiation factor 5A
hg38_v1_chr10_+_80413817_80413850	0.423175	GLI3	ENST00000372187.9|PRXL2A|ENSG00000122378.14|peroxiredoxin like 2A
hg38_v1_chr9_-_98255618_98255671	0.422696	GLI3	ENST00000375066.6|TBC1D2|ENSG00000095383.20|TBC1 domain family member 2	ENST00000465784.7|TBC1D2|ENSG00000095383.20|TBC1 domain family member 2
hg38_v1_chr17_-_41047267_41047316	0.422549	GLI3	ENST00000542137.1|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1	ENST00000391419.3|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1
hg38_v1_chr20_-_1325746_1325869	0.420978	GLI3	ENST00000339987.7|SDCBP2|ENSG00000125775.15|syndecan binding protein 2
hg38_v1_chr12_-_54385727_54385785	0.418639	GLI3	ENST00000551109.5|ZNF385A|ENSG00000161642.18|zinc finger protein 385A	ENST00000546970.5|ZNF385A|ENSG00000161642.18|zinc finger protein 385A
hg38_v1_chr16_-_90008988_90009009	0.418081	GLI3	ENST00000568662.2|DBNDD1|ENSG00000003249.15|dysbindin domain containing 1
hg38_v1_chr5_-_132777215_132777226	0.417009	GLI3	ENST00000458488.2|SEPTIN8|ENSG00000164402.14|septin 8
hg38_v1_chr7_-_102517755_102517777	0.416092	GLI3	ENST00000306682.6|RASA4B|ENSG00000170667.15|RAS p21 protein activator 4B	ENST00000465829.6|RASA4B|ENSG00000170667.15|RAS p21 protein activator 4B	ENST00000541662.5|RASA4B|ENSG00000170667.15|RAS p21 protein activator 4B
hg38_v1_chr2_+_219627622_219627648	0.415379	GLI3	ENST00000358055.8|SLC4A3|ENSG00000114923.17|solute carrier family 4 member 3
hg38_v1_chr16_-_88785210_88785227	0.413664	GLI3	ENST00000301015.14|PIEZO1|ENSG00000103335.22|piezo type mechanosensitive ion channel component 1
hg38_v1_chr10_-_88952763_88952779	0.413639	GLI3	ENST00000224784.10|ACTA2|ENSG00000107796.13|actin alpha 2, smooth muscle
hg38_v1_chr1_-_161549892_161549905	0.411621	GLI3	ENST00000426740.7|FCGR3A|ENSG00000203747.12|Fc fragment of IgG receptor IIIa
hg38_v1_chr20_+_833734_833780	0.410076	GLI3	ENST00000304189.6|FAM110A|ENSG00000125898.13|family with sequence similarity 110 member A
hg38_v1_chr12_+_70366277_70366305	0.409552	GLI3	ENST00000258111.5|KCNMB4|ENSG00000135643.5|potassium calcium-activated channel subfamily M regulatory beta subunit 4
hg38_v1_chr9_+_87497675_87497696	0.409469	GLI3	ENST00000472284.5|DAPK1|ENSG00000196730.13|death associated protein kinase 1	ENST00000469640.6|DAPK1|ENSG00000196730.13|death associated protein kinase 1
hg38_v1_chr19_+_41708585_41708634	0.408908	GLI3	ENST00000398599.8|CEACAM5|ENSG00000105388.16|CEA cell adhesion molecule 5	ENST00000221992.11|CEACAM5|ENSG00000105388.16|CEA cell adhesion molecule 5
hg38_v1_chr11_-_59668981_59669056	0.404944	GLI3	ENST00000300146.10|PATL1|ENSG00000166889.14|PAT1 homolog 1, processing body mRNA decay factor
hg38_v1_chr21_-_6468040_6468040	0.404086	GLI3	ENST00000618024.4|CBSL|ENSG00000274276.4|cystathionine beta-synthase like	ENST00000617706.4|CBSL|ENSG00000274276.4|cystathionine beta-synthase like
hg38_v1_chr22_-_27801712_27801771	0.402237	GLI3	ENST00000302326.5|MN1|ENSG00000169184.6|MN1 proto-oncogene, transcriptional regulator
hg38_v1_chr12_-_52777343_52777347	0.401643	GLI3	ENST00000332411.2|KRT76|ENSG00000185069.2|keratin 76
hg38_v1_chr17_-_41168219_41168224	0.40138	GLI3	ENST00000391356.4|KRTAP4-3|ENSG00000196156.5|keratin associated protein 4-3
hg38_v1_chr22_-_38097772_38097788	0.401225	GLI3	ENST00000332536.10|BAIAP2L2|ENSG00000128298.18|BAR/IMD domain containing adaptor protein 2 like 2
hg38_v1_chr19_+_10106398_10106419	0.400154	GLI3	ENST00000393793.5|PPAN|ENSG00000130810.20|peter pan homolog
hg38_v1_chr19_+_10106320_10106395	0.400088	GLI3	ENST00000253107.12|PPAN|ENSG00000130810.20|peter pan homolog	ENST00000393796.4|PPAN-P2RY11|ENSG00000243207.6|PPAN-P2RY11 readthrough
hg38_v1_chrX_+_154144242_154144243	0.399187	GLI3	ENST00000369951.9|OPN1LW|ENSG00000102076.10|opsin 1, long wave sensitive
hg38_v1_chr11_+_76782250_76782313	0.398113	GLI3	ENST00000533752.1|TSKU|ENSG00000182704.8|tsukushi, small leucine rich proteoglycan	ENST00000612930.1|TSKU|ENSG00000182704.8|tsukushi, small leucine rich proteoglycan
hg38_v1_chr17_+_77127865_77127882	0.398012	GLI3	ENST00000586429.5|SEC14L1|ENSG00000129657.16|SEC14 like lipid binding 1
hg38_v1_chr19_+_44914247_44914332	0.398001	GLI3	ENST00000588750.5|APOC1|ENSG00000130208.10|apolipoprotein C1	ENST00000588802.5|APOC1|ENSG00000130208.10|apolipoprotein C1
hg38_v1_chr9_+_123356189_123356253	0.395774	GLI3	ENST00000373631.8|CRB2|ENSG00000148204.12|crumbs cell polarity complex component 2
hg38_v1_chr7_-_92836555_92836608	0.393682	GLI3	ENST00000424848.3|CDK6|ENSG00000105810.10|cyclin dependent kinase 6
hg38_v1_chrX_+_3066833_3066833	0.393496	GLI3	ENST00000359361.2|ARSF|ENSG00000062096.15|arylsulfatase F
hg38_v1_chr1_-_200620729_200620759	0.392947	GLI3	ENST00000367350.5|KIF14|ENSG00000118193.12|kinesin family member 14
hg38_v1_chr13_-_100588731_100588795	0.392137	GLI3	ENST00000471912.1|GGACT|ENSG00000134864.11|gamma-glutamylamine cyclotransferase	ENST00000683975.1|GGACT|ENSG00000134864.11|gamma-glutamylamine cyclotransferase
hg38_v1_chr18_+_79863668_79863668	0.39167	GLI3	ENST00000316249.3|KCNG2|ENSG00000178342.4|potassium voltage-gated channel modifier subfamily G member 2
hg38_v1_chr4_+_17810945_17811004	0.389583	GLI3	ENST00000251496.7|NCAPG|ENSG00000109805.10|non-SMC condensin I complex subunit G
hg38_v1_chr7_-_102616692_102616756	0.38929	GLI3	ENST00000521076.5|RASA4|ENSG00000105808.18|RAS p21 protein activator 4	ENST00000462172.5|RASA4|ENSG00000105808.18|RAS p21 protein activator 4	ENST00000522801.5|RASA4|ENSG00000105808.18|RAS p21 protein activator 4	ENST00000262940.12|RASA4|ENSG00000105808.18|RAS p21 protein activator 4	ENST00000449970.6|RASA4|ENSG00000105808.18|RAS p21 protein activator 4
hg38_v1_chr12_-_122266410_122266424	0.38894	GLI3	ENST00000451053.3|VPS33A|ENSG00000139719.11|VPS33A core subunit of CORVET and HOPS complexes
hg38_v1_chr1_-_50023875_50023944	0.387999	GLI3	ENST00000371836.1|AGBL4|ENSG00000186094.17|ATP/GTP binding protein like 4	ENST00000371838.5|AGBL4|ENSG00000186094.17|ATP/GTP binding protein like 4
hg38_v1_chrX_-_48356688_48356707	0.387552	GLI3	ENST00000298396.7|SSX3|ENSG00000165584.16|SSX family member 3	ENST00000376893.7|SSX3|ENSG00000165584.16|SSX family member 3
hg38_v1_chr12_+_78864768_78864827	0.387433	GLI3	ENST00000261205.9|SYT1|ENSG00000067715.14|synaptotagmin 1	ENST00000457153.6|SYT1|ENSG00000067715.14|synaptotagmin 1
hg38_v1_chr9_-_98255553_98255580	0.386377	GLI3	ENST00000375064.5|TBC1D2|ENSG00000095383.20|TBC1 domain family member 2
hg38_v1_chr20_-_52191697_52191725	0.383977	GLI3	ENST00000361387.6|ZFP64|ENSG00000020256.20|ZFP64 zinc finger protein
hg38_v1_chr7_-_4883683_4883727	0.382695	GLI3	ENST00000399583.4|RADIL|ENSG00000157927.17|Rap associating with DIL domain
hg38_v1_chr20_+_33731976_33732007	0.382444	GLI3	ENST00000375200.6|ZNF341|ENSG00000131061.14|zinc finger protein 341
hg38_v1_chr17_-_36264514_36264553	0.382321	GLI3	ENST00000618620.4|TBC1D3I|ENSG00000274933.5|TBC1 domain family member 3I	ENST00000621034.1|TBC1D3I|ENSG00000274933.5|TBC1 domain family member 3I
hg38_v1_chr5_-_176416222_176416261	0.380039	GLI3	ENST00000508425.5|CLTB|ENSG00000175416.16|clathrin light chain B
hg38_v1_chr17_-_42683057_42683070	0.379554	GLI3	ENST00000591765.1|CCR10|ENSG00000184451.5|C-C motif chemokine receptor 10
hg38_v1_chr17_+_44656429_44656484	0.377451	GLI3	ENST00000409122.7|MEIOC|ENSG00000180336.18|meiosis specific with coiled-coil domain
hg38_v1_chr11_-_12009082_12009098	0.377242	GLI3	ENST00000396505.7|DKK3|ENSG00000050165.19|dickkopf WNT signaling pathway inhibitor 3
hg38_v1_chr4_+_8580387_8580402	0.376068	GLI3	ENST00000382487.5|GPR78|ENSG00000155269.12|G protein-coupled receptor 78
hg38_v1_chr7_+_44200960_44201049	0.374893	GLI3	ENST00000496112.5|YKT6|ENSG00000106636.9|YKT6 v-SNARE homolog	ENST00000678359.1|YKT6|ENSG00000106636.9|YKT6 v-SNARE homolog	ENST00000223369.3|YKT6|ENSG00000106636.9|YKT6 v-SNARE homolog	ENST00000677090.1|YKT6|ENSG00000106636.9|YKT6 v-SNARE homolog
hg38_v1_chr11_-_73761051_73761159	0.373715	GLI3	ENST00000336083.8|RAB6A|ENSG00000175582.20|RAB6A, member RAS oncogene family	ENST00000536566.5|RAB6A|ENSG00000175582.20|RAB6A, member RAS oncogene family	ENST00000541588.5|RAB6A|ENSG00000175582.20|RAB6A, member RAS oncogene family	ENST00000540771.5|RAB6A|ENSG00000175582.20|RAB6A, member RAS oncogene family	ENST00000310653.10|RAB6A|ENSG00000175582.20|RAB6A, member RAS oncogene family
hg38_v1_chr21_-_43058941_43058954	0.373144	GLI3	ENST00000451248.5|CBS|ENSG00000160200.18|cystathionine beta-synthase	ENST00000458223.5|CBS|ENSG00000160200.18|cystathionine beta-synthase
hg38_v1_chr1_+_36088868_36088918	0.37144	GLI3	ENST00000373178.5|ADPRS|ENSG00000116863.11|ADP-ribosylserine hydrolase
hg38_v1_chr14_-_106639589_106639657	0.370922	GLI3	ENST00000390630.3|IGHV4-61|ENSG00000211970.3|immunoglobulin heavy variable 4-61
hg38_v1_chr18_-_46964408_46964408	0.370289	GLI3	ENST00000676383.1|ENSG00000288616.1|ENSG00000288616.1|elongin A3 family member D
hg38_v1_chr1_-_6497096_6497235	0.369969	GLI3	ENST00000537245.6|PLEKHG5|ENSG00000171680.23|pleckstrin homology and RhoGEF domain containing G5
hg38_v1_chr17_+_80415159_80415315	0.369821	GLI3	ENST00000520367.5|ENDOV|ENSG00000173818.17|endonuclease V	ENST00000518137.6|ENDOV|ENSG00000173818.17|endonuclease V	ENST00000523999.5|ENDOV|ENSG00000173818.17|endonuclease V	ENST00000323854.9|ENDOV|ENSG00000173818.17|endonuclease V	ENST00000522751.5|ENDOV|ENSG00000173818.17|endonuclease V
hg38_v1_chr17_+_75754618_75754712	0.36938	GLI3	ENST00000584939.1|ITGB4|ENSG00000132470.14|integrin subunit beta 4
hg38_v1_chr12_-_124863902_124863926	0.368769	GLI3	ENST00000339570.9|SCARB1|ENSG00000073060.17|scavenger receptor class B member 1	ENST00000680556.1|SCARB1|ENSG00000073060.17|scavenger receptor class B member 1
hg38_v1_chr19_-_19643547_19643561	0.366997	GLI3	ENST00000587238.5|GMIP|ENSG00000089639.11|GEM interacting protein
hg38_v1_chr11_-_119317119_119317137	0.364947	GLI3	ENST00000264036.6|MCAM|ENSG00000076706.17|melanoma cell adhesion molecule
hg38_v1_chr9_-_98255589_98255615	0.36487	GLI3	ENST00000342112.9|TBC1D2|ENSG00000095383.20|TBC1 domain family member 2
hg38_v1_chr13_-_60163764_60163776	0.362492	GLI3	ENST00000377908.6|DIAPH3|ENSG00000139734.19|diaphanous related formin 3	ENST00000400319.5|DIAPH3|ENSG00000139734.19|diaphanous related formin 3	ENST00000400320.5|DIAPH3|ENSG00000139734.19|diaphanous related formin 3	ENST00000267215.8|DIAPH3|ENSG00000139734.19|diaphanous related formin 3
hg38_v1_chr13_-_46182136_46182213	0.359778	GLI3	ENST00000323076.7|LCP1|ENSG00000136167.15|lymphocyte cytosolic protein 1
hg38_v1_chr21_+_42403874_42403941	0.359244	GLI3	ENST00000319294.11|UBASH3A|ENSG00000160185.15|ubiquitin associated and SH3 domain containing A	ENST00000398367.1|UBASH3A|ENSG00000160185.15|ubiquitin associated and SH3 domain containing A
hg38_v1_chr11_+_35180342_35180383	0.358993	GLI3	ENST00000639002.1|CD44|ENSG00000026508.20|CD44 molecule (Indian blood group)
hg38_v1_chr7_-_727242_727341	0.357894	GLI3	ENST00000537384.6|PRKAR1B|ENSG00000188191.15|protein kinase cAMP-dependent type I regulatory subunit beta	ENST00000417852.5|PRKAR1B|ENSG00000188191.15|protein kinase cAMP-dependent type I regulatory subunit beta
hg38_v1_chr19_+_30372364_30372434	0.357379	GLI3	ENST00000355537.4|ZNF536|ENSG00000198597.9|zinc finger protein 536
hg38_v1_chr8_-_81112055_81112076	0.354933	GLI3	ENST00000220597.4|PAG1|ENSG00000076641.4|phosphoprotein membrane anchor with glycosphingolipid microdomains 1
hg38_v1_chr1_-_229434086_229434104	0.353822	GLI3	ENST00000366684.7|ACTA1|ENSG00000143632.15|actin alpha 1, skeletal muscle	ENST00000684723.1|ACTA1|ENSG00000143632.15|actin alpha 1, skeletal muscle	ENST00000366683.4|ACTA1|ENSG00000143632.15|actin alpha 1, skeletal muscle
hg38_v1_chr16_+_89620584_89620607	0.353697	GLI3	ENST00000393092.7|DPEP1|ENSG00000015413.9|dipeptidase 1
hg38_v1_chr1_+_203626775_203626807	0.35347	GLI3	ENST00000367218.7|ATP2B4|ENSG00000058668.15|ATPase plasma membrane Ca2+ transporting 4
hg38_v1_chrX_+_135032346_135032364	0.353008	GLI3	ENST00000257013.9|RTL8C|ENSG00000134590.14|retrotransposon Gag like 8C
hg38_v1_chr18_-_47029842_47029842	0.351854	GLI3	ENST00000674825.1|ENSG00000288631.1|ENSG00000288631.1|elongin A3
hg38_v1_chr7_-_101217569_101217616	0.351443	GLI3	ENST00000223127.8|PLOD3|ENSG00000106397.12|procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
hg38_v1_chr9_+_87497852_87497893	0.348761	GLI3	ENST00000408954.8|DAPK1|ENSG00000196730.13|death associated protein kinase 1
hg38_v1_chr1_+_203626813_203626842	0.347734	GLI3	ENST00000357681.10|ATP2B4|ENSG00000058668.15|ATPase plasma membrane Ca2+ transporting 4
hg38_v1_chr22_+_44024269_44024313	0.347365	GLI3	ENST00000338758.12|PARVB|ENSG00000188677.15|parvin beta
hg38_v1_chr19_-_19643597_19643663	0.346402	GLI3	ENST00000587205.1|GMIP|ENSG00000089639.11|GEM interacting protein	ENST00000203556.9|GMIP|ENSG00000089639.11|GEM interacting protein
hg38_v1_chr10_+_74176537_74176652	0.344401	GLI3	ENST00000672394.1|ADK|ENSG00000156110.15|adenosine kinase
hg38_v1_chr11_+_124865425_124865465	0.343484	GLI3	ENST00000397801.6|ROBO3|ENSG00000154134.15|roundabout guidance receptor 3
hg38_v1_chr20_+_37346128_37346149	0.342229	GLI3	ENST00000373578.7|SRC|ENSG00000197122.12|SRC proto-oncogene, non-receptor tyrosine kinase
hg38_v1_chrX_+_152917830_152917900	0.34076	GLI3	ENST00000318529.12|ZNF185|ENSG00000147394.18|zinc finger protein 185 with LIM domain
hg38_v1_chr11_+_111912725_111912752	0.339081	GLI3	ENST00000304298.4|HSPB2|ENSG00000170276.6|heat shock protein family B (small) member 2
hg38_v1_chr11_-_12008584_12008636	0.33834	GLI3	ENST00000534511.5|DKK3|ENSG00000050165.19|dickkopf WNT signaling pathway inhibitor 3	ENST00000683431.1|DKK3|ENSG00000050165.19|dickkopf WNT signaling pathway inhibitor 3
hg38_v1_chr1_-_156601435_156601490	0.337228	GLI3	ENST00000438976.6|GPATCH4|ENSG00000160818.17|G-patch domain containing 4	ENST00000368232.9|GPATCH4|ENSG00000160818.17|G-patch domain containing 4	ENST00000415314.6|GPATCH4|ENSG00000160818.17|G-patch domain containing 4
hg38_v1_chr19_+_19528901_19528917	0.336892	GLI3	ENST00000514277.6|YJEFN3|ENSG00000250067.12|YjeF N-terminal domain containing 3
hg38_v1_chr1_+_11934651_11934779	0.336716	GLI3	ENST00000449038.5|PLOD1|ENSG00000083444.17|procollagen-lysine,2-oxoglutarate 5-dioxygenase 1	ENST00000196061.5|PLOD1|ENSG00000083444.17|procollagen-lysine,2-oxoglutarate 5-dioxygenase 1	ENST00000429000.6|PLOD1|ENSG00000083444.17|procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
hg38_v1_chr4_-_99657820_99657832	0.33626	GLI3	ENST00000511828.2|C4orf54|ENSG00000248713.2|chromosome 4 open reading frame 54
hg38_v1_chr17_+_7627963_7627980	0.334832	GLI3	ENST00000575729.5|SHBG|ENSG00000129214.15|sex hormone binding globulin	ENST00000340624.9|SHBG|ENSG00000129214.15|sex hormone binding globulin
hg38_v1_chr11_-_61891381_61891460	0.334827	GLI3	ENST00000525588.5|FADS3|ENSG00000221968.9|fatty acid desaturase 3
hg38_v1_chr6_+_46652968_46652995	0.334683	GLI3	ENST00000371347.10|SLC25A27|ENSG00000153291.16|solute carrier family 25 member 27
hg38_v1_chr16_-_88977196_88977217	0.334102	GLI3	ENST00000268679.9|CBFA2T3|ENSG00000129993.15|CBFA2/RUNX1 partner transcriptional co-repressor 3
hg38_v1_chr16_+_88857086_88857168	0.334037	GLI3	ENST00000567895.5|TRAPPC2L|ENSG00000167515.10|trafficking protein particle complex 2 like	ENST00000301021.7|TRAPPC2L|ENSG00000167515.10|trafficking protein particle complex 2 like	ENST00000625770.2|TRAPPC2L|ENSG00000167515.10|trafficking protein particle complex 2 like	ENST00000565504.5|TRAPPC2L|ENSG00000167515.10|trafficking protein particle complex 2 like	ENST00000567312.5|TRAPPC2L|ENSG00000167515.10|trafficking protein particle complex 2 like	ENST00000568583.5|TRAPPC2L|ENSG00000167515.10|trafficking protein particle complex 2 like	ENST00000561840.1|TRAPPC2L|ENSG00000167515.10|trafficking protein particle complex 2 like
hg38_v1_chr2_+_200585987_200586094	0.333415	GLI3	ENST00000374700.7|AOX1|ENSG00000138356.14|aldehyde oxidase 1
hg38_v1_chr8_+_22999535_22999569	0.333138	GLI3	ENST00000251822.7|RHOBTB2|ENSG00000008853.17|Rho related BTB domain containing 2
hg38_v1_chr9_+_121737151_121737184	0.331479	GLI3	ENST00000648444.1|DAB2IP|ENSG00000136848.17|DAB2 interacting protein
hg38_v1_chrX_-_47629845_47629965	0.330724	GLI3	ENST00000469388.1|CFP|ENSG00000126759.14|complement factor properdin	ENST00000396992.8|CFP|ENSG00000126759.14|complement factor properdin	ENST00000377005.6|CFP|ENSG00000126759.14|complement factor properdin
hg38_v1_chr19_+_53869384_53869406	0.330393	GLI3	ENST00000391769.2|MYADM|ENSG00000179820.16|myeloid associated differentiation marker
hg38_v1_chr4_-_176792913_176792934	0.329489	GLI3	ENST00000618562.2|VEGFC|ENSG00000150630.4|vascular endothelial growth factor C
hg38_v1_chr6_+_125219804_125219845	0.329489	GLI3	ENST00000524679.1|TPD52L1|ENSG00000111907.21|TPD52 like 1
hg38_v1_chrX_+_65667645_65667661	0.328409	GLI3	ENST00000360270.7|MSN|ENSG00000147065.17|moesin
hg38_v1_chr17_+_36323884_36323884	0.327892	GLI3	ENST00000569055.2|TBC1D3G|ENSG00000260287.4|TBC1 domain family member 3G
hg38_v1_chr17_-_38192555_38192555	0.327524	GLI3	ENST00000620215.3|TBC1D3|ENSG00000274611.4|TBC1 domain family member 3
hg38_v1_chr3_-_197298092_197298166	0.326593	GLI3	ENST00000392382.6|DLG1|ENSG00000075711.21|discs large MAGUK scaffold protein 1
hg38_v1_chr3_-_43621897_43622020	0.326109	GLI3	ENST00000444344.5|ANO10|ENSG00000160746.13|anoctamin 10	ENST00000456438.5|ANO10|ENSG00000160746.13|anoctamin 10	ENST00000350459.8|ANO10|ENSG00000160746.13|anoctamin 10	ENST00000396091.7|ANO10|ENSG00000160746.13|anoctamin 10	ENST00000451430.6|ANO10|ENSG00000160746.13|anoctamin 10	ENST00000428472.5|ANO10|ENSG00000160746.13|anoctamin 10	ENST00000292246.8|ANO10|ENSG00000160746.13|anoctamin 10	ENST00000414522.6|ANO10|ENSG00000160746.13|anoctamin 10
hg38_v1_chrX_-_52707161_52707189	0.325587	GLI3	ENST00000336777.9|SSX2|ENSG00000241476.8|SSX family member 2	ENST00000337502.5|SSX2|ENSG00000241476.8|SSX family member 2
hg38_v1_chr14_+_22515623_22515623	0.325488	GLI3	ENST00000390509.1|TRAJ28|ENSG00000211861.1|T cell receptor alpha joining 28
hg38_v1_chr19_+_57487735_57487768	0.323564	GLI3	ENST00000347466.10|ZNF419|ENSG00000105136.21|zinc finger protein 419	ENST00000523138.5|ZNF419|ENSG00000105136.21|zinc finger protein 419	ENST00000415379.6|ZNF419|ENSG00000105136.21|zinc finger protein 419	ENST00000221735.12|ZNF419|ENSG00000105136.21|zinc finger protein 419	ENST00000521754.5|ZNF419|ENSG00000105136.21|zinc finger protein 419
hg38_v1_chr15_-_78641225_78641270	0.322775	GLI3	ENST00000412074.6|CHRNB4|ENSG00000117971.12|cholinergic receptor nicotinic beta 4 subunit
hg38_v1_chr1_+_202462730_202462744	0.322652	GLI3	ENST00000290419.9|PPP1R12B|ENSG00000077157.22|protein phosphatase 1 regulatory subunit 12B	ENST00000491336.5|PPP1R12B|ENSG00000077157.22|protein phosphatase 1 regulatory subunit 12B
hg38_v1_chr7_-_97872394_97872415	0.322039	GLI3	ENST00000455086.5|ASNS|ENSG00000070669.17|asparagine synthetase (glutamine-hydrolyzing)	ENST00000394308.8|ASNS|ENSG00000070669.17|asparagine synthetase (glutamine-hydrolyzing)	ENST00000453600.5|ASNS|ENSG00000070669.17|asparagine synthetase (glutamine-hydrolyzing)
hg38_v1_chr1_-_109619605_109619621	0.321545	GLI3	ENST00000679935.1|GNAT2|ENSG00000134183.13|G protein subunit alpha transducin 2
hg38_v1_chr22_-_30529163_30529163	0.319718	GLI3	ENST00000437871.1|SEC14L6|ENSG00000214491.8|SEC14 like lipid binding 6
hg38_v1_chr21_-_32612806_32612881	0.31954	GLI3	ENST00000673807.1|CFAP298-TCP10L|ENSG00000265590.10|CFAP298-TCP10L readthrough
hg38_v1_chr18_-_47023927_47023927	0.319387	GLI3	ENST00000675219.1|ENSG00000288607.1|ENSG00000288607.1|elongin A3 family member B
hg38_v1_chr19_-_35501878_35501913	0.318705	GLI3	ENST00000593342.5|DMKN|ENSG00000161249.21|dermokine	ENST00000601650.1|DMKN|ENSG00000161249.21|dermokine	ENST00000408915.6|DMKN|ENSG00000161249.21|dermokine
hg38_v1_chr11_-_119346655_119346680	0.318178	GLI3	ENST00000360167.4|MFRP|ENSG00000235718.9|membrane frizzled-related protein
hg38_v1_chr16_+_56565070_56565078	0.317992	GLI3	ENST00000219162.4|MT4|ENSG00000102891.4|metallothionein 4
hg38_v1_chr9_-_35689913_35690056	0.316856	GLI3	ENST00000329305.6|TPM2|ENSG00000198467.16|tropomyosin 2	ENST00000645482.3|TPM2|ENSG00000198467.16|tropomyosin 2	ENST00000647435.1|TPM2|ENSG00000198467.16|tropomyosin 2	ENST00000378292.9|TPM2|ENSG00000198467.16|tropomyosin 2
hg38_v1_chr17_-_7114813_7114831	0.315644	GLI3	ENST00000254850.11|ASGR2|ENSG00000161944.16|asialoglycoprotein receptor 2
hg38_v1_chr17_+_38127951_38127951	0.315301	GLI3	ENST00000621587.2|TBC1D3E|ENSG00000278599.6|TBC1 domain family member 3E
hg38_v1_chr7_+_1086800_1086876	0.314221	GLI3	ENST00000413368.5|GPER1|ENSG00000164850.15|G protein-coupled estrogen receptor 1	ENST00000397092.5|GPER1|ENSG00000164850.15|G protein-coupled estrogen receptor 1	ENST00000297469.3|GPER1|ENSG00000164850.15|G protein-coupled estrogen receptor 1
hg38_v1_chr17_-_36388423_36388423	0.313543	GLI3	ENST00000610350.3|TBC1D3H|ENSG00000274226.5|TBC1 domain family member 3H
hg38_v1_chr2_-_85668172_85668208	0.313136	GLI3	ENST00000428225.5|SFTPB|ENSG00000168878.19|surfactant protein B	ENST00000519937.7|SFTPB|ENSG00000168878.19|surfactant protein B
hg38_v1_chr7_+_150991005_150991018	0.312881	GLI3	ENST00000297494.8|NOS3|ENSG00000164867.11|nitric oxide synthase 3
hg38_v1_chr7_-_97872099_97872119	0.312664	GLI3	ENST00000437628.5|ASNS|ENSG00000070669.17|asparagine synthetase (glutamine-hydrolyzing)
hg38_v1_chr11_+_46381033_46381135	0.310415	GLI3	ENST00000359803.7|MDK|ENSG00000110492.16|midkine
hg38_v1_chr22_-_30289607_30289635	0.310195	GLI3	ENST00000404953.7|CASTOR1|ENSG00000239282.8|cytosolic arginine sensor for mTORC1 subunit 1
hg38_v1_chr17_-_7114648_7114702	0.309031	GLI3	ENST00000355035.9|ASGR2|ENSG00000161944.16|asialoglycoprotein receptor 2
hg38_v1_chr6_+_46652914_46652923	0.308167	GLI3	ENST00000411689.6|SLC25A27|ENSG00000153291.16|solute carrier family 25 member 27
hg38_v1_chr9_+_92947516_92947529	0.307374	GLI3	ENST00000375482.8|FGD3|ENSG00000127084.19|FYVE, RhoGEF and PH domain containing 3
hg38_v1_chr7_+_142492121_142492145	0.306472	GLI3	ENST00000390374.3|TRBV7-6|ENSG00000211727.3|T cell receptor beta variable 7-6
hg38_v1_chr19_-_45815228_45815273	0.306009	GLI3	ENST00000597055.1|RSPH6A|ENSG00000104941.8|radial spoke head 6 homolog A
hg38_v1_chr17_+_83079595_83079622	0.305825	GLI3	ENST00000320095.12|METRNL|ENSG00000176845.13|meteorin like, glial cell differentiation regulator
hg38_v1_chr9_+_133061981_133061981	0.305697	GLI3	ENST00000372080.8|CEL|ENSG00000170835.17|carboxyl ester lipase
hg38_v1_chr6_+_110982028_110982098	0.304535	GLI3	ENST00000441448.7|RPF2|ENSG00000197498.13|ribosome production factor 2 homolog
hg38_v1_chr1_+_35079374_35079413	0.30441	GLI3	ENST00000359858.9|ZMYM1|ENSG00000197056.11|zinc finger MYM-type containing 1	ENST00000373330.1|ZMYM1|ENSG00000197056.11|zinc finger MYM-type containing 1
hg38_v1_chr22_+_46296850_46296969	0.30387	GLI3	ENST00000454366.2|GTSE1|ENSG00000075218.19|G2 and S-phase expressed 1
hg38_v1_chr15_-_78641200_78641222	0.302859	GLI3	ENST00000261751.8|CHRNB4|ENSG00000117971.12|cholinergic receptor nicotinic beta 4 subunit
hg38_v1_chr3_+_141778148_141778148	0.302826	GLI3	ENST00000264952.2|GRK7|ENSG00000114124.3|G protein-coupled receptor kinase 7
hg38_v1_chr19_-_45815303_45815318	0.301743	GLI3	ENST00000221538.8|RSPH6A|ENSG00000104941.8|radial spoke head 6 homolog A
hg38_v1_chr19_-_54115626_54115666	0.30146	GLI3	ENST00000391759.6|TFPT|ENSG00000105619.14|TCF3 fusion partner
hg38_v1_chr6_+_36948257_36948313	0.301328	GLI3	ENST00000647861.1|PI16|ENSG00000164530.15|peptidase inhibitor 16	ENST00000611814.4|PI16|ENSG00000164530.15|peptidase inhibitor 16
hg38_v1_chrX_-_142205260_142205296	0.301267	GLI3	ENST00000247452.4|MAGEC2|ENSG00000046774.10|MAGE family member C2
hg38_v1_chr19_+_19528861_19528881	0.300757	GLI3	ENST00000436027.9|YJEFN3|ENSG00000250067.12|YjeF N-terminal domain containing 3
hg38_v1_chr19_+_46602050_46602072	0.300444	GLI3	ENST00000599839.5|CALM3|ENSG00000160014.17|calmodulin 3	ENST00000596362.1|CALM3|ENSG00000160014.17|calmodulin 3
hg38_v1_chr14_-_106360320_106360324	0.299835	GLI3	ENST00000390615.2|IGHV3-33|ENSG00000211955.2|immunoglobulin heavy variable 3-33
hg38_v1_chr5_+_74685225_74685239	0.299226	GLI3	ENST00000261416.12|HEXB|ENSG00000049860.14|hexosaminidase subunit beta
hg38_v1_chr2_+_64988469_64988492	0.297911	GLI3	ENST00000531327.5|SLC1A4|ENSG00000115902.11|solute carrier family 1 member 4
hg38_v1_chr11_-_2423012_2423045	0.296811	GLI3	ENST00000533881.5|TRPM5|ENSG00000070985.13|transient receptor potential cation channel subfamily M member 5	ENST00000533060.5|TRPM5|ENSG00000070985.13|transient receptor potential cation channel subfamily M member 5	ENST00000528453.1|TRPM5|ENSG00000070985.13|transient receptor potential cation channel subfamily M member 5	ENST00000155858.10|TRPM5|ENSG00000070985.13|transient receptor potential cation channel subfamily M member 5
hg38_v1_chr14_-_106557465_106557481	0.296197	GLI3	ENST00000390625.3|IGHV3-49|ENSG00000211965.4|immunoglobulin heavy variable 3-49
hg38_v1_chr10_+_74176741_74176779	0.295801	GLI3	ENST00000673027.1|ADK|ENSG00000156110.15|adenosine kinase	ENST00000372734.5|ADK|ENSG00000156110.15|adenosine kinase	ENST00000541550.6|ADK|ENSG00000156110.15|adenosine kinase
hg38_v1_chr1_+_43933794_43933846	0.294824	GLI3	ENST00000372359.10|ARTN|ENSG00000117407.17|artemin	ENST00000498139.6|ARTN|ENSG00000117407.17|artemin	ENST00000491846.5|ARTN|ENSG00000117407.17|artemin
hg38_v1_chr6_-_32816910_32817062	0.294339	GLI3	ENST00000447394.1|HLA-DOB|ENSG00000241106.8|major histocompatibility complex, class II, DO beta	ENST00000438763.7|HLA-DOB|ENSG00000241106.8|major histocompatibility complex, class II, DO beta
hg38_v1_chr14_-_105601728_105601728	0.293996	GLI3	ENST00000641420.1|IGHE|ENSG00000211891.6|immunoglobulin heavy constant epsilon	ENST00000390541.2|IGHE|ENSG00000211891.6|immunoglobulin heavy constant epsilon
hg38_v1_chr16_+_56191476_56191508	0.293694	GLI3	ENST00000262493.12|GNAO1|ENSG00000087258.16|G protein subunit alpha o1
hg38_v1_chr7_+_142511614_142511626	0.293246	GLI3	ENST00000390377.1|TRBV7-7|ENSG00000253291.1|T cell receptor beta variable 7-7
hg38_v1_chr17_-_37989048_37989060	0.292996	GLI3	ENST00000617678.2|TBC1D3L|ENSG00000274512.6|TBC1 domain family member 3L	ENST00000612727.5|TBC1D3L|ENSG00000274512.6|TBC1 domain family member 3L
hg38_v1_chr17_+_38003976_38003976	0.292962	GLI3	ENST00000616101.4|TBC1D3D|ENSG00000274419.6|TBC1 domain family member 3D
hg38_v1_chr19_+_44643798_44643899	0.292598	GLI3	ENST00000344956.8|PVR|ENSG00000073008.15|PVR cell adhesion molecule
hg38_v1_chr14_-_39103187_39103248	0.292362	GLI3	ENST00000548032.6|SEC23A|ENSG00000100934.15|SEC23 homolog A, COPII coat complex component	ENST00000556092.5|SEC23A|ENSG00000100934.15|SEC23 homolog A, COPII coat complex component	ENST00000557280.5|SEC23A|ENSG00000100934.15|SEC23 homolog A, COPII coat complex component	ENST00000307712.11|SEC23A|ENSG00000100934.15|SEC23 homolog A, COPII coat complex component	ENST00000545328.6|SEC23A|ENSG00000100934.15|SEC23 homolog A, COPII coat complex component	ENST00000553970.1|SEC23A|ENSG00000100934.15|SEC23 homolog A, COPII coat complex component
hg38_v1_chr13_+_31739520_31739531	0.292318	GLI3	ENST00000298386.7|RXFP2|ENSG00000133105.8|relaxin family peptide receptor 2
hg38_v1_chr18_-_36828771_36828842	0.291888	GLI3	ENST00000589049.5|TPGS2|ENSG00000134779.15|tubulin polyglutamylase complex subunit 2	ENST00000587129.5|TPGS2|ENSG00000134779.15|tubulin polyglutamylase complex subunit 2	ENST00000590842.5|TPGS2|ENSG00000134779.15|tubulin polyglutamylase complex subunit 2
hg38_v1_chr14_+_92652468_92652526	0.291363	GLI3	ENST00000556418.1|RIN3|ENSG00000100599.16|Ras and Rab interactor 3
hg38_v1_chr2_-_9423190_9423250	0.29105	GLI3	ENST00000497105.1|ITGB1BP1|ENSG00000119185.13|integrin subunit beta 1 binding protein 1	ENST00000360635.7|ITGB1BP1|ENSG00000119185.13|integrin subunit beta 1 binding protein 1	ENST00000359712.7|ITGB1BP1|ENSG00000119185.13|integrin subunit beta 1 binding protein 1
hg38_v1_chr20_-_31723491_31723552	0.289134	GLI3	ENST00000676582.1|BCL2L1|ENSG00000171552.14|BCL2 like 1	ENST00000422920.2|BCL2L1|ENSG00000171552.14|BCL2 like 1
hg38_v1_chr19_+_54630960_54631074	0.288499	GLI3	ENST00000396317.5|LILRB1|ENSG00000104972.16|leukocyte immunoglobulin like receptor B1	ENST00000396315.5|LILRB1|ENSG00000104972.16|leukocyte immunoglobulin like receptor B1
hg38_v1_chr1_+_209768482_209768493	0.288068	GLI3	ENST00000367023.5|TRAF3IP3|ENSG00000009790.15|TRAF3 interacting protein 3
hg38_v1_chrX_-_79367307_79367380	0.284548	GLI3	ENST00000373298.7|ITM2A|ENSG00000078596.11|integral membrane protein 2A
hg38_v1_chr19_-_34677157_34677161	0.283202	GLI3	ENST00000601241.6|SCGB2B2|ENSG00000205209.8|secretoglobin family 2B member 2
hg38_v1_chr16_+_55656249_55656276	0.281586	GLI3	ENST00000219833.13|SLC6A2|ENSG00000103546.19|solute carrier family 6 member 2	ENST00000574918.2|SLC6A2|ENSG00000103546.19|solute carrier family 6 member 2
hg38_v1_chr7_-_97872120_97872165	0.281387	GLI3	ENST00000394309.7|ASNS|ENSG00000070669.17|asparagine synthetase (glutamine-hydrolyzing)	ENST00000414884.1|ASNS|ENSG00000070669.17|asparagine synthetase (glutamine-hydrolyzing)	ENST00000442734.5|ASNS|ENSG00000070669.17|asparagine synthetase (glutamine-hydrolyzing)
hg38_v1_chr4_-_7068033_7068088	0.281094	GLI3	ENST00000264954.5|GRPEL1|ENSG00000109519.13|GrpE like 1, mitochondrial
hg38_v1_chr19_-_14518383_14518407	0.28075	GLI3	ENST00000254322.3|DNAJB1|ENSG00000132002.9|DnaJ heat shock protein family (Hsp40) member B1	ENST00000595139.2|DNAJB1|ENSG00000132002.9|DnaJ heat shock protein family (Hsp40) member B1
hg38_v1_chr17_-_3471739_3471828	0.280459	GLI3	ENST00000268981.9|SPATA22|ENSG00000141255.13|spermatogenesis associated 22	ENST00000397168.7|SPATA22|ENSG00000141255.13|spermatogenesis associated 22	ENST00000355380.8|SPATA22|ENSG00000141255.13|spermatogenesis associated 22	ENST00000571553.5|SPATA22|ENSG00000141255.13|spermatogenesis associated 22	ENST00000572969.6|SPATA22|ENSG00000141255.13|spermatogenesis associated 22	ENST00000574797.5|SPATA22|ENSG00000141255.13|spermatogenesis associated 22	ENST00000575375.5|SPATA22|ENSG00000141255.13|spermatogenesis associated 22
hg38_v1_chr1_+_2476315_2476334	0.27969	GLI3	ENST00000419816.6|PLCH2|ENSG00000149527.18|phospholipase C eta 2
hg38_v1_chr19_-_49057730_49057754	0.278833	GLI3	ENST00000684222.1|CGB7|ENSG00000196337.13|chorionic gonadotropin subunit beta 7	ENST00000596965.5|CGB7|ENSG00000196337.13|chorionic gonadotropin subunit beta 7
hg38_v1_chr17_+_47253817_47253853	0.278716	GLI3	ENST00000559488.7|ITGB3|ENSG00000259207.9|integrin subunit beta 3	ENST00000571680.1|ITGB3|ENSG00000259207.9|integrin subunit beta 3
hg38_v1_chr22_+_50089879_50090010	0.278553	GLI3	ENST00000545383.5|MOV10L1|ENSG00000073146.16|Mov10 like RISC complex RNA helicase 1	ENST00000262794.10|MOV10L1|ENSG00000073146.16|Mov10 like RISC complex RNA helicase 1
hg38_v1_chr14_+_78403686_78403755	0.278268	GLI3	ENST00000553631.1|NRXN3|ENSG00000021645.20|neurexin 3	ENST00000554719.5|NRXN3|ENSG00000021645.20|neurexin 3
hg38_v1_chrX_-_153673778_153673836	0.278144	GLI3	ENST00000340888.8|PNCK|ENSG00000130822.16|pregnancy up-regulated nonubiquitous CaM kinase
hg38_v1_chr14_-_106335613_106335613	0.27703	GLI3	ENST00000603660.1|IGHV3-30|ENSG00000270550.1|immunoglobulin heavy variable 3-30
hg38_v1_chr20_+_833705_833732	0.2761	GLI3	ENST00000381941.8|FAM110A|ENSG00000125898.13|family with sequence similarity 110 member A
hg38_v1_chr15_+_88621290_88621370	0.275925	GLI3	ENST00000332810.4|AEN|ENSG00000181026.15|apoptosis enhancing nuclease	ENST00000559528.1|AEN|ENSG00000181026.15|apoptosis enhancing nuclease
hg38_v1_chr6_-_110179702_110179718	0.275562	GLI3	ENST00000392587.6|WASF1|ENSG00000112290.13|WASP family member 1
hg38_v1_chr20_+_44355692_44355805	0.275533	GLI3	ENST00000316673.8|HNF4A|ENSG00000101076.18|hepatocyte nuclear factor 4 alpha	ENST00000609795.5|HNF4A|ENSG00000101076.18|hepatocyte nuclear factor 4 alpha	ENST00000457232.5|HNF4A|ENSG00000101076.18|hepatocyte nuclear factor 4 alpha	ENST00000609262.5|HNF4A|ENSG00000101076.18|hepatocyte nuclear factor 4 alpha
hg38_v1_chr13_+_31739542_31739562	0.275382	GLI3	ENST00000380314.2|RXFP2|ENSG00000133105.8|relaxin family peptide receptor 2
hg38_v1_chr19_-_40390175_40390186	0.273984	GLI3	ENST00000291823.3|HIPK4|ENSG00000160396.9|homeodomain interacting protein kinase 4
hg38_v1_chr9_-_92670124_92670162	0.273605	GLI3	ENST00000287996.8|IPPK|ENSG00000127080.10|inositol-pentakisphosphate 2-kinase
hg38_v1_chr14_+_104689588_104689642	0.272919	GLI3	ENST00000330634.11|INF2|ENSG00000203485.14|inverted formin 2	ENST00000392634.9|INF2|ENSG00000203485.14|inverted formin 2	ENST00000675482.1|INF2|ENSG00000203485.14|inverted formin 2	ENST00000398337.8|INF2|ENSG00000203485.14|inverted formin 2
hg38_v1_chr10_-_49134021_49134021	0.271792	GLI3	ENST00000311787.6|FAM170B|ENSG00000172538.7|family with sequence similarity 170 member B
hg38_v1_chr20_+_18588040_18588068	0.271507	GLI3	ENST00000377452.4|DTD1|ENSG00000125821.13|D-aminoacyl-tRNA deacylase 1
hg38_v1_chrX_-_107777038_107777091	0.270117	GLI3	ENST00000480691.2|TSC22D3|ENSG00000157514.17|TSC22 domain family member 3	ENST00000506081.5|TSC22D3|ENSG00000157514.17|TSC22 domain family member 3	ENST00000514426.1|TSC22D3|ENSG00000157514.17|TSC22 domain family member 3
hg38_v1_chr19_+_10106688_10106733	0.269629	GLI3	ENST00000430370.1|PPAN|ENSG00000130810.20|peter pan homolog
hg38_v1_chr3_-_197299067_197299158	0.269432	GLI3	ENST00000663148.1|DLG1|ENSG00000075711.21|discs large MAGUK scaffold protein 1
hg38_v1_chr3_-_39154558_39154571	0.269311	GLI3	ENST00000514182.1|CSRNP1|ENSG00000144655.15|cysteine and serine rich nuclear protein 1
hg38_v1_chr14_+_18967434_18967434	0.269163	GLI3	ENST00000547889.6|POTEM|ENSG00000222036.8|POTE ankyrin domain family member M
hg38_v1_chr6_+_20403679_20403735	0.268527	GLI3	ENST00000535432.2|E2F3|ENSG00000112242.15|E2F transcription factor 3
hg38_v1_chr17_+_38428456_38428486	0.26812	GLI3	ENST00000622683.5|ARHGAP23|ENSG00000275832.5|Rho GTPase activating protein 23	ENST00000620417.4|ARHGAP23|ENSG00000275832.5|Rho GTPase activating protein 23
hg38_v1_chr14_+_75278820_75278977	0.268019	GLI3	ENST00000554617.1|FOS|ENSG00000170345.10|Fos proto-oncogene, AP-1 transcription factor subunit	ENST00000554212.5|FOS|ENSG00000170345.10|Fos proto-oncogene, AP-1 transcription factor subunit	ENST00000535987.5|FOS|ENSG00000170345.10|Fos proto-oncogene, AP-1 transcription factor subunit	ENST00000303562.9|FOS|ENSG00000170345.10|Fos proto-oncogene, AP-1 transcription factor subunit	ENST00000555242.1|FOS|ENSG00000170345.10|Fos proto-oncogene, AP-1 transcription factor subunit
hg38_v1_chr1_-_39691450_39691485	0.267392	GLI3	ENST00000612703.3|HPCAL4|ENSG00000116983.13|hippocalcin like 4	ENST00000617690.2|HPCAL4|ENSG00000116983.13|hippocalcin like 4
hg38_v1_chr1_+_243256034_243256082	0.26689	GLI3	ENST00000366541.8|SDCCAG8|ENSG00000054282.16|SHH signaling and ciliogenesis regulator SDCCAG8
hg38_v1_chr1_+_213989691_213989730	0.266095	GLI3	ENST00000607425.1|PROX1|ENSG00000117707.16|prospero homeobox 1
hg38_v1_chr18_-_63319987_63320152	0.265595	GLI3	ENST00000398117.1|BCL2|ENSG00000171791.14|BCL2 apoptosis regulator
hg38_v1_chr1_-_39691393_39691445	0.264647	GLI3	ENST00000372844.8|HPCAL4|ENSG00000116983.13|hippocalcin like 4
hg38_v1_chr11_+_46381645_46381693	0.263348	GLI3	ENST00000617138.4|MDK|ENSG00000110492.16|midkine	ENST00000395566.9|MDK|ENSG00000110492.16|midkine	ENST00000395569.8|MDK|ENSG00000110492.16|midkine
hg38_v1_chr8_-_143953845_143953920	0.26263	GLI3	ENST00000354958.6|PLEC|ENSG00000178209.16|plectin
hg38_v1_chrX_+_52184874_52184903	0.262475	GLI3	ENST00000599522.7|MAGED4|ENSG00000154545.17|MAGE family member D4	ENST00000471932.6|MAGED4|ENSG00000154545.17|MAGE family member D4
hg38_v1_chr6_-_25832026_25832058	0.261334	GLI3	ENST00000476801.5|SLC17A1|ENSG00000124568.12|solute carrier family 17 member 1	ENST00000244527.10|SLC17A1|ENSG00000124568.12|solute carrier family 17 member 1
hg38_v1_chr4_-_48906720_48906783	0.258962	GLI3	ENST00000381464.6|OCIAD2|ENSG00000145247.12|OCIA domain containing 2	ENST00000508632.6|OCIAD2|ENSG00000145247.12|OCIA domain containing 2
hg38_v1_chr17_+_18744026_18744075	0.25867	GLI3	ENST00000308799.8|FBXW10|ENSG00000171931.13|F-box and WD repeat domain containing 10	ENST00000395665.9|FBXW10|ENSG00000171931.13|F-box and WD repeat domain containing 10	ENST00000301938.4|FBXW10|ENSG00000171931.13|F-box and WD repeat domain containing 10
hg38_v1_chrX_+_17737443_17737498	0.258486	GLI3	ENST00000398080.5|SCML1|ENSG00000047634.15|Scm polycomb group protein like 1	ENST00000380045.7|SCML1|ENSG00000047634.15|Scm polycomb group protein like 1	ENST00000380043.7|SCML1|ENSG00000047634.15|Scm polycomb group protein like 1	ENST00000380041.8|SCML1|ENSG00000047634.15|Scm polycomb group protein like 1
hg38_v1_chrX_-_8801337_8801383	0.257835	GLI3	ENST00000543214.1|FAM9A|ENSG00000183304.10|family with sequence similarity 9 member A	ENST00000381003.7|FAM9A|ENSG00000183304.10|family with sequence similarity 9 member A
hg38_v1_chr8_-_144755424_144755537	0.257818	GLI3	ENST00000525191.2|ZNF251|ENSG00000198169.9|zinc finger protein 251	ENST00000292562.12|ZNF251|ENSG00000198169.9|zinc finger protein 251
hg38_v1_chr12_-_120250145_120250168	0.25774	GLI3	ENST00000458477.6|PXN|ENSG00000089159.17|paxillin
hg38_v1_chr22_-_23580223_23580309	0.257562	GLI3	ENST00000249053.3|IGLL1|ENSG00000128322.7|immunoglobulin lambda like polypeptide 1	ENST00000330377.3|IGLL1|ENSG00000128322.7|immunoglobulin lambda like polypeptide 1	ENST00000438703.1|IGLL1|ENSG00000128322.7|immunoglobulin lambda like polypeptide 1
hg38_v1_chr3_-_195811889_195811903	0.257521	GLI3	ENST00000475231.5|MUC4|ENSG00000145113.22|mucin 4, cell surface associated
hg38_v1_chrX_-_53225176_53225225	0.256935	GLI3	ENST00000404049.7|KDM5C|ENSG00000126012.12|lysine demethylase 5C	ENST00000375401.8|KDM5C|ENSG00000126012.12|lysine demethylase 5C
hg38_v1_chr11_-_128587551_128587566	0.256928	GLI3	ENST00000392668.8|ETS1|ENSG00000134954.14|ETS proto-oncogene 1, transcription factor
hg38_v1_chr1_-_39639626_39639654	0.255225	GLI3	ENST00000372852.4|HEYL|ENSG00000163909.8|hes related family bHLH transcription factor with YRPW motif like
hg38_v1_chr16_+_30053123_30053207	0.253346	GLI3	ENST00000395248.6|ENSG00000285043.3|ENSG00000285043.3|novel protein	ENST00000575627.5|ENSG00000285043.3|ENSG00000285043.3|novel protein	ENST00000566897.6|ENSG00000285043.3|ENSG00000285043.3|novel protein	ENST00000568435.6|ENSG00000285043.3|ENSG00000285043.3|novel protein	ENST00000338110.11|ENSG00000285043.3|ENSG00000285043.3|novel protein	ENST00000562240.1|ENSG00000285043.3|ENSG00000285043.3|novel protein
hg38_v1_chrX_-_104013708_104013708	0.252518	GLI3	ENST00000217926.7|H2BW1|ENSG00000123569.10|H2B.W histone 1
hg38_v1_chr19_-_54115271_54115308	0.252429	GLI3	ENST00000391757.1|TFPT|ENSG00000105619.14|TCF3 fusion partner
hg38_v1_chr3_+_124384513_124384730	0.25231	GLI3	ENST00000682540.1|KALRN|ENSG00000160145.16|kalirin RhoGEF kinase	ENST00000522553.6|KALRN|ENSG00000160145.16|kalirin RhoGEF kinase	ENST00000682695.1|KALRN|ENSG00000160145.16|kalirin RhoGEF kinase	ENST00000682674.1|KALRN|ENSG00000160145.16|kalirin RhoGEF kinase	ENST00000684382.1|KALRN|ENSG00000160145.16|kalirin RhoGEF kinase
hg38_v1_chr5_-_139404050_139404106	0.252277	GLI3	ENST00000514983.5|SPATA24|ENSG00000170469.11|spermatogenesis associated 24	ENST00000507779.2|SPATA24|ENSG00000170469.11|spermatogenesis associated 24	ENST00000451821.6|SPATA24|ENSG00000170469.11|spermatogenesis associated 24	ENST00000509959.5|SPATA24|ENSG00000170469.11|spermatogenesis associated 24	ENST00000302091.9|SPATA24|ENSG00000170469.11|spermatogenesis associated 24	ENST00000450845.7|SPATA24|ENSG00000170469.11|spermatogenesis associated 24
hg38_v1_chr3_+_188153271_188153313	0.251123	GLI3	ENST00000448637.5|LPP|ENSG00000145012.14|LIM domain containing preferred translocation partner in lipoma
hg38_v1_chr2_+_126898876_126898906	0.250646	GLI3	ENST00000568484.6|TEX51|ENSG00000237524.10|testis expressed 51	ENST00000636457.1|TEX51|ENSG00000237524.10|testis expressed 51
hg38_v1_chrX_-_101659796_101659857	0.249202	GLI3	ENST00000431597.5|ARMCX2|ENSG00000184867.14|armadillo repeat containing X-linked 2	ENST00000458024.5|ARMCX2|ENSG00000184867.14|armadillo repeat containing X-linked 2	ENST00000413506.5|ARMCX2|ENSG00000184867.14|armadillo repeat containing X-linked 2	ENST00000440675.5|ARMCX2|ENSG00000184867.14|armadillo repeat containing X-linked 2	ENST00000328766.9|ARMCX2|ENSG00000184867.14|armadillo repeat containing X-linked 2	ENST00000356824.9|ARMCX2|ENSG00000184867.14|armadillo repeat containing X-linked 2
hg38_v1_chr7_-_111562455_111562517	0.248738	GLI3	ENST00000452895.5|IMMP2L|ENSG00000184903.10|inner mitochondrial membrane peptidase subunit 2	ENST00000405709.7|IMMP2L|ENSG00000184903.10|inner mitochondrial membrane peptidase subunit 2	ENST00000452753.1|IMMP2L|ENSG00000184903.10|inner mitochondrial membrane peptidase subunit 2	ENST00000331762.7|IMMP2L|ENSG00000184903.10|inner mitochondrial membrane peptidase subunit 2
hg38_v1_chrX_+_154182596_154182596	0.248682	GLI3	ENST00000595290.6|OPN1MW|ENSG00000268221.6|opsin 1, medium wave sensitive
hg38_v1_chr17_-_49209367_49209402	0.248622	GLI3	ENST00000300406.6|GNGT2|ENSG00000167083.7|G protein subunit gamma transducin 2	ENST00000511277.5|GNGT2|ENSG00000167083.7|G protein subunit gamma transducin 2	ENST00000511673.1|GNGT2|ENSG00000167083.7|G protein subunit gamma transducin 2
hg38_v1_chr20_-_52105644_52105678	0.248557	GLI3	ENST00000371523.8|ZFP64|ENSG00000020256.20|ZFP64 zinc finger protein
hg38_v1_chr8_-_143976722_143976767	0.247278	GLI3	ENST00000436759.6|PLEC|ENSG00000178209.16|plectin	ENST00000527303.2|PLEC|ENSG00000178209.16|plectin
hg38_v1_chr1_+_207496229_207496255	0.246472	GLI3	ENST00000367051.6|CR1|ENSG00000203710.12|complement C3b/C4b receptor 1 (Knops blood group)	ENST00000367053.6|CR1|ENSG00000203710.12|complement C3b/C4b receptor 1 (Knops blood group)	ENST00000367052.6|CR1|ENSG00000203710.12|complement C3b/C4b receptor 1 (Knops blood group)
hg38_v1_chr3_-_59049947_59050084	0.246441	GLI3	ENST00000491845.5|CFAP20DC|ENSG00000163689.20|CFAP20 domain containing	ENST00000472469.5|CFAP20DC|ENSG00000163689.20|CFAP20 domain containing	ENST00000482387.6|CFAP20DC|ENSG00000163689.20|CFAP20 domain containing	ENST00000295966.11|CFAP20DC|ENSG00000163689.20|CFAP20 domain containing
hg38_v1_chr19_-_43781249_43781294	0.243828	GLI3	ENST00000615047.4|KCNN4|ENSG00000104783.14|potassium calcium-activated channel subfamily N member 4
hg38_v1_chr12_+_130162456_130162474	0.243025	GLI3	ENST00000539839.1|FZD10|ENSG00000111432.5|frizzled class receptor 10	ENST00000229030.5|FZD10|ENSG00000111432.5|frizzled class receptor 10
hg38_v1_chr3_-_177197248_177197260	0.242735	GLI3	ENST00000427349.5|TBL1XR1|ENSG00000177565.18|TBL1X receptor 1	ENST00000352800.10|TBL1XR1|ENSG00000177565.18|TBL1X receptor 1
hg38_v1_chr19_-_42427379_42427393	0.242148	GLI3	ENST00000244289.9|LIPE|ENSG00000079435.10|lipase E, hormone sensitive type
hg38_v1_chr16_+_3065348_3065377	0.241168	GLI3	ENST00000529699.5|IL32|ENSG00000008517.19|interleukin 32	ENST00000526464.6|IL32|ENSG00000008517.19|interleukin 32	ENST00000440815.7|IL32|ENSG00000008517.19|interleukin 32	ENST00000529550.5|IL32|ENSG00000008517.19|interleukin 32
hg38_v1_chr12_-_54384687_54384771	0.240402	GLI3	ENST00000550120.1|ZNF385A|ENSG00000161642.18|zinc finger protein 385A	ENST00000547210.5|ZNF385A|ENSG00000161642.18|zinc finger protein 385A	ENST00000394313.7|ZNF385A|ENSG00000161642.18|zinc finger protein 385A
hg38_v1_chr11_+_844067_844158	0.240053	GLI3	ENST00000397406.5|TSPAN4|ENSG00000214063.11|tetraspanin 4	ENST00000409543.6|TSPAN4|ENSG00000214063.11|tetraspanin 4	ENST00000525201.5|TSPAN4|ENSG00000214063.11|tetraspanin 4
hg38_v1_chrX_-_52069172_52069248	0.239482	GLI3	ENST00000486010.1|MAGED4B|ENSG00000187243.16|MAGE family member D4B	ENST00000497164.5|MAGED4B|ENSG00000187243.16|MAGE family member D4B	ENST00000360134.10|MAGED4B|ENSG00000187243.16|MAGE family member D4B	ENST00000485287.5|MAGED4B|ENSG00000187243.16|MAGE family member D4B	ENST00000335504.9|MAGED4B|ENSG00000187243.16|MAGE family member D4B
hg38_v1_chr1_+_203026481_203026553	0.239257	GLI3	ENST00000367240.6|PPFIA4|ENSG00000143847.15|PTPRF interacting protein alpha 4
hg38_v1_chr7_+_150991087_150991107	0.239254	GLI3	ENST00000461406.5|NOS3|ENSG00000164867.11|nitric oxide synthase 3
hg38_v1_chr7_-_100167284_100167301	0.237849	GLI3	ENST00000413800.5|GAL3ST4|ENSG00000197093.11|galactose-3-O-sulfotransferase 4
hg38_v1_chr3_+_111859180_111859275	0.237053	GLI3	ENST00000412622.5|PHLDB2|ENSG00000144824.21|pleckstrin homology like domain family B member 2	ENST00000431670.7|PHLDB2|ENSG00000144824.21|pleckstrin homology like domain family B member 2
hg38_v1_chr15_-_100544341_100544413	0.236874	GLI3	ENST00000394113.5|CERS3|ENSG00000154227.14|ceramide synthase 3
hg38_v1_chr3_-_165837412_165837430	0.236358	GLI3	ENST00000479451.5|BCHE|ENSG00000114200.10|butyrylcholinesterase	ENST00000488954.1|BCHE|ENSG00000114200.10|butyrylcholinesterase	ENST00000264381.8|BCHE|ENSG00000114200.10|butyrylcholinesterase
hg38_v1_chr17_-_36176636_36176636	0.235986	GLI3	ENST00000611257.5|TBC1D3B|ENSG00000274808.6|TBC1 domain family member 3B	ENST00000616006.1|TBC1D3B|ENSG00000274808.6|TBC1 domain family member 3B
hg38_v1_chr4_-_48906788_48906803	0.235306	GLI3	ENST00000273860.8|OCIAD2|ENSG00000145247.12|OCIA domain containing 2
hg38_v1_chr22_+_39040857_39040885	0.235122	GLI3	ENST00000381565.2|APOBEC3F|ENSG00000128394.17|apolipoprotein B mRNA editing enzyme catalytic subunit 3F	ENST00000308521.10|APOBEC3F|ENSG00000128394.17|apolipoprotein B mRNA editing enzyme catalytic subunit 3F
hg38_v1_chr11_-_64742937_64742973	0.234834	GLI3	ENST00000394428.5|RASGRP2|ENSG00000068831.19|RAS guanyl releasing protein 2	ENST00000394429.5|RASGRP2|ENSG00000068831.19|RAS guanyl releasing protein 2
hg38_v1_chr17_+_44141899_44141944	0.234611	GLI3	ENST00000319977.8|HROB|ENSG00000125319.15|homologous recombination factor with OB-fold	ENST00000585683.6|HROB|ENSG00000125319.15|homologous recombination factor with OB-fold
hg38_v1_chr20_+_49982969_49982989	0.234566	GLI3	ENST00000244050.3|SNAI1|ENSG00000124216.4|snail family transcriptional repressor 1
hg38_v1_chrX_+_52751132_52751269	0.234482	GLI3	ENST00000616191.4|SSX2B|ENSG00000268447.6|SSX family member 2B	ENST00000596480.6|SSX2B|ENSG00000268447.6|SSX family member 2B	ENST00000612490.1|SSX2B|ENSG00000268447.6|SSX family member 2B
hg38_v1_chr16_-_75266781_75266919	0.233911	GLI3	ENST00000420641.7|BCAR1|ENSG00000050820.17|BCAR1 scaffold protein, Cas family member
hg38_v1_chr11_+_134069060_134069079	0.233704	GLI3	ENST00000534549.5|JAM3|ENSG00000166086.13|junctional adhesion molecule 3	ENST00000441717.3|JAM3|ENSG00000166086.13|junctional adhesion molecule 3	ENST00000299106.9|JAM3|ENSG00000166086.13|junctional adhesion molecule 3
hg38_v1_chr5_-_132777344_132777370	0.233646	GLI3	ENST00000378706.5|SEPTIN8|ENSG00000164402.14|septin 8
hg38_v1_chr20_-_23751256_23751292	0.233625	GLI3	ENST00000398402.1|CST1|ENSG00000170373.9|cystatin SN
hg38_v1_chr22_+_24594781_24594814	0.233523	GLI3	ENST00000456869.5|GGT1|ENSG00000100031.19|gamma-glutamyltransferase 1	ENST00000411974.5|GGT1|ENSG00000100031.19|gamma-glutamyltransferase 1
hg38_v1_chr1_-_84893166_84893219	0.232973	GLI3	ENST00000370611.4|LPAR3|ENSG00000171517.6|lysophosphatidic acid receptor 3
hg38_v1_chr11_+_118607579_118607596	0.232338	GLI3	ENST00000530708.4|PHLDB1|ENSG00000019144.19|pleckstrin homology like domain family B member 1
hg38_v1_chr7_+_142455120_142455174	0.231656	GLI3	ENST00000390369.2|TRBV7-4|ENSG00000253409.1|T cell receptor beta variable 7-4
hg38_v1_chr17_-_49209217_49209262	0.231625	GLI3	ENST00000515635.5|GNGT2|ENSG00000167083.7|G protein subunit gamma transducin 2
hg38_v1_chrX_-_40647509_40647573	0.231532	GLI3	ENST00000378421.1|CXorf38|ENSG00000185753.13|chromosome X open reading frame 38	ENST00000378426.5|CXorf38|ENSG00000185753.13|chromosome X open reading frame 38	ENST00000327877.10|CXorf38|ENSG00000185753.13|chromosome X open reading frame 38
hg38_v1_chr2_-_70790643_70790643	0.231531	GLI3	ENST00000332372.6|FIGLA|ENSG00000183733.6|folliculogenesis specific bHLH transcription factor
hg38_v1_chr11_+_134224610_134224723	0.230895	GLI3	ENST00000281187.10|VPS26B|ENSG00000151502.11|VPS26, retromer complex component B	ENST00000525095.2|VPS26B|ENSG00000151502.11|VPS26, retromer complex component B
hg38_v1_chr5_+_178859924_178860009	0.229837	GLI3	ENST00000322434.8|ZNF354B|ENSG00000178338.11|zinc finger protein 354B
hg38_v1_chr17_-_44947637_44947781	0.229631	GLI3	ENST00000587309.5|KIF18B|ENSG00000186185.14|kinesin family member 18B	ENST00000593135.6|KIF18B|ENSG00000186185.14|kinesin family member 18B
hg38_v1_chr1_+_40040219_40040323	0.229413	GLI3	ENST00000372797.7|CAP1|ENSG00000131236.18|cyclase associated actin cytoskeleton regulatory protein 1	ENST00000372802.5|CAP1|ENSG00000131236.18|cyclase associated actin cytoskeleton regulatory protein 1	ENST00000449311.5|CAP1|ENSG00000131236.18|cyclase associated actin cytoskeleton regulatory protein 1
hg38_v1_chr8_-_66613208_66613224	0.229397	GLI3	ENST00000522677.8|MYBL1|ENSG00000185697.17|MYB proto-oncogene like 1
hg38_v1_chr19_+_43716095_43716110	0.229221	GLI3	ENST00000596627.1|IRGC|ENSG00000124449.7|immunity related GTPase cinema
hg38_v1_chr11_-_111913134_111913188	0.228667	GLI3	ENST00000533971.2|CRYAB|ENSG00000109846.9|crystallin alpha B	ENST00000526180.6|CRYAB|ENSG00000109846.9|crystallin alpha B
hg38_v1_chr10_-_75401746_75401772	0.22834	GLI3	ENST00000372524.5|ZNF503|ENSG00000165655.17|zinc finger protein 503
hg38_v1_chr15_+_31366138_31366156	0.228175	GLI3	ENST00000558844.1|KLF13|ENSG00000169926.11|Kruppel like factor 13
hg38_v1_chr8_-_143939543_143939644	0.227095	GLI3	ENST00000345136.8|PLEC|ENSG00000178209.16|plectin
hg38_v1_chr10_-_101839818_101839878	0.226992	GLI3	ENST00000348850.9|KCNIP2|ENSG00000120049.20|potassium voltage-gated channel interacting protein 2
hg38_v1_chr19_+_10106592_10106647	0.226907	GLI3	ENST00000446223.5|PPAN|ENSG00000130810.20|peter pan homolog
hg38_v1_chr17_+_44142015_44142060	0.226569	GLI3	ENST00000245382.6|HROB|ENSG00000125319.15|homologous recombination factor with OB-fold
hg38_v1_chr6_+_31498071_31498086	0.226329	GLI3	ENST00000399150.7|MICB|ENSG00000204516.10|MHC class I polypeptide-related sequence B
hg38_v1_chr16_+_56632651_56632707	0.22627	GLI3	ENST00000379818.4|MT1M|ENSG00000205364.4|metallothionein 1M	ENST00000570233.1|MT1M|ENSG00000205364.4|metallothionein 1M
hg38_v1_chr6_-_34105965_34105984	0.22605	GLI3	ENST00000609222.5|GRM4|ENSG00000124493.14|glutamate metabotropic receptor 4
hg38_v1_chr8_+_12108172_12108172	0.225961	GLI3	ENST00000400078.3|ZNF705D|ENSG00000215343.7|zinc finger protein 705D
hg38_v1_chr1_+_2476284_2476300	0.225324	GLI3	ENST00000378486.8|PLCH2|ENSG00000149527.18|phospholipase C eta 2
hg38_v1_chr19_-_49017087_49017110	0.22506	GLI3	ENST00000649238.3|LHB|ENSG00000104826.15|luteinizing hormone subunit beta
hg38_v1_chr14_+_94110728_94110815	0.224291	GLI3	ENST00000616764.4|IFI27|ENSG00000165949.12|interferon alpha inducible protein 27	ENST00000618863.1|IFI27|ENSG00000165949.12|interferon alpha inducible protein 27	ENST00000611954.4|IFI27|ENSG00000165949.12|interferon alpha inducible protein 27	ENST00000618200.4|IFI27|ENSG00000165949.12|interferon alpha inducible protein 27	ENST00000621160.4|IFI27|ENSG00000165949.12|interferon alpha inducible protein 27	ENST00000555819.5|IFI27|ENSG00000165949.12|interferon alpha inducible protein 27	ENST00000620396.4|IFI27|ENSG00000165949.12|interferon alpha inducible protein 27	ENST00000612813.4|IFI27|ENSG00000165949.12|interferon alpha inducible protein 27	ENST00000620066.1|IFI27|ENSG00000165949.12|interferon alpha inducible protein 27
hg38_v1_chr3_-_197298558_197298667	0.224105	GLI3	ENST00000656944.1|DLG1|ENSG00000075711.21|discs large MAGUK scaffold protein 1	ENST00000346964.6|DLG1|ENSG00000075711.21|discs large MAGUK scaffold protein 1	ENST00000448528.6|DLG1|ENSG00000075711.21|discs large MAGUK scaffold protein 1	ENST00000655488.1|DLG1|ENSG00000075711.21|discs large MAGUK scaffold protein 1	ENST00000357674.9|DLG1|ENSG00000075711.21|discs large MAGUK scaffold protein 1	ENST00000667157.1|DLG1|ENSG00000075711.21|discs large MAGUK scaffold protein 1	ENST00000661336.1|DLG1|ENSG00000075711.21|discs large MAGUK scaffold protein 1	ENST00000654737.1|DLG1|ENSG00000075711.21|discs large MAGUK scaffold protein 1	ENST00000659716.1|DLG1|ENSG00000075711.21|discs large MAGUK scaffold protein 1	ENST00000657381.1|DLG1|ENSG00000075711.21|discs large MAGUK scaffold protein 1
hg38_v1_chr17_-_7404039_7404105	0.223682	GLI3	ENST00000576017.1|TMEM256|ENSG00000205544.4|transmembrane protein 256	ENST00000302422.4|TMEM256|ENSG00000205544.4|transmembrane protein 256
hg38_v1_chr16_+_57413861_57413877	0.223287	GLI3	ENST00000616880.1|CCL17|ENSG00000102970.11|C-C motif chemokine ligand 17
hg38_v1_chr19_+_10871516_10871596	0.223195	GLI3	ENST00000327064.9|CARM1|ENSG00000142453.12|coactivator associated arginine methyltransferase 1	ENST00000588947.5|CARM1|ENSG00000142453.12|coactivator associated arginine methyltransferase 1
hg38_v1_chr7_+_120988683_120988764	0.222655	GLI3	ENST00000340646.9|CPED1|ENSG00000106034.18|cadherin like and PC-esterase domain containing 1	ENST00000310396.10|CPED1|ENSG00000106034.18|cadherin like and PC-esterase domain containing 1
hg38_v1_chr6_-_36757380_36757411	0.222273	GLI3	ENST00000393189.2|CPNE5|ENSG00000124772.12|copine 5
hg38_v1_chr3_-_10292901_10292917	0.221823	GLI3	ENST00000430179.5|GHRL|ENSG00000157017.16|ghrelin and obestatin prepropeptide	ENST00000287656.11|GHRL|ENSG00000157017.16|ghrelin and obestatin prepropeptide	ENST00000437422.6|GHRL|ENSG00000157017.16|ghrelin and obestatin prepropeptide	ENST00000439975.6|GHRL|ENSG00000157017.16|ghrelin and obestatin prepropeptide	ENST00000446937.2|GHRL|ENSG00000157017.16|ghrelin and obestatin prepropeptide	ENST00000449238.6|GHRL|ENSG00000157017.16|ghrelin and obestatin prepropeptide	ENST00000457360.5|GHRL|ENSG00000157017.16|ghrelin and obestatin prepropeptide
hg38_v1_chr1_-_151993822_151993872	0.221352	GLI3	ENST00000368811.8|S100A10|ENSG00000197747.9|S100 calcium binding protein A10
hg38_v1_chr19_-_45405034_45405118	0.220081	GLI3	ENST00000592134.1|PPP1R13L|ENSG00000104881.16|protein phosphatase 1 regulatory subunit 13 like	ENST00000360957.10|PPP1R13L|ENSG00000104881.16|protein phosphatase 1 regulatory subunit 13 like
hg38_v1_chrX_-_7927375_7927453	0.219764	GLI3	ENST00000381042.9|PNPLA4|ENSG00000006757.12|patatin like phospholipase domain containing 4
hg38_v1_chrX_+_15507302_15507318	0.218698	GLI3	ENST00000342014.6|BMX|ENSG00000102010.15|BMX non-receptor tyrosine kinase
hg38_v1_chr11_+_46381698_46381746	0.218595	GLI3	ENST00000395565.5|MDK|ENSG00000110492.16|midkine
hg38_v1_chr11_+_46381753_46381766	0.217505	GLI3	ENST00000407067.1|MDK|ENSG00000110492.16|midkine
hg38_v1_chr19_-_41428730_41428730	0.217327	GLI3	ENST00000321702.2|B3GNT8|ENSG00000177191.2|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8
hg38_v1_chr3_-_195811857_195811883	0.216693	GLI3	ENST00000349607.8|MUC4|ENSG00000145113.22|mucin 4, cell surface associated	ENST00000346145.8|MUC4|ENSG00000145113.22|mucin 4, cell surface associated
hg38_v1_chr2_-_24084822_24084841	0.216632	GLI3	ENST00000238721.9|TP53I3|ENSG00000115129.14|tumor protein p53 inducible protein 3
hg38_v1_chr16_+_715092_715174	0.216266	GLI3	ENST00000568223.7|METRN|ENSG00000103260.9|meteorin, glial cell differentiation regulator
hg38_v1_chrX_+_52184904_52184932	0.215974	GLI3	ENST00000375626.7|MAGED4|ENSG00000154545.17|MAGE family member D4	ENST00000467526.1|MAGED4|ENSG00000154545.17|MAGE family member D4
hg38_v1_chr14_+_94081278_94081396	0.215825	GLI3	ENST00000555523.6|IFI27L1|ENSG00000165948.11|interferon alpha inducible protein 27 like 1	ENST00000393115.7|IFI27L1|ENSG00000165948.11|interferon alpha inducible protein 27 like 1	ENST00000554166.5|IFI27L1|ENSG00000165948.11|interferon alpha inducible protein 27 like 1	ENST00000556381.5|IFI27L1|ENSG00000165948.11|interferon alpha inducible protein 27 like 1	ENST00000553664.1|IFI27L1|ENSG00000165948.11|interferon alpha inducible protein 27 like 1	ENST00000555341.5|IFI27L1|ENSG00000165948.11|interferon alpha inducible protein 27 like 1	ENST00000557218.5|IFI27L1|ENSG00000165948.11|interferon alpha inducible protein 27 like 1	ENST00000554544.5|IFI27L1|ENSG00000165948.11|interferon alpha inducible protein 27 like 1	ENST00000557066.5|IFI27L1|ENSG00000165948.11|interferon alpha inducible protein 27 like 1
hg38_v1_chr3_-_10292933_10292953	0.21536	GLI3	ENST00000429122.1|GHRL|ENSG00000157017.16|ghrelin and obestatin prepropeptide	ENST00000425479.1|GHRL|ENSG00000157017.16|ghrelin and obestatin prepropeptide	ENST00000335542.13|GHRL|ENSG00000157017.16|ghrelin and obestatin prepropeptide
hg38_v1_chr1_+_207496147_207496164	0.215113	GLI3	ENST00000400960.7|CR1|ENSG00000203710.12|complement C3b/C4b receptor 1 (Knops blood group)	ENST00000367049.9|CR1|ENSG00000203710.12|complement C3b/C4b receptor 1 (Knops blood group)
hg38_v1_chr20_-_63254429_63254470	0.214668	GLI3	ENST00000370316.8|NKAIN4|ENSG00000101198.15|sodium/potassium transporting ATPase interacting 4
hg38_v1_chr3_+_126983035_126983126	0.21445	GLI3	ENST00000393409.3|PLXNA1|ENSG00000114554.12|plexin A1
hg38_v1_chr18_-_46969912_46969912	0.214234	GLI3	ENST00000620522.2|ELOA3CP|ENSG00000275553.4|elongin A3 family member C, pseudogene
hg38_v1_chr2_-_223838022_223838044	0.213819	GLI3	ENST00000444408.1|AP1S3|ENSG00000152056.17|adaptor related protein complex 1 subunit sigma 3
hg38_v1_chr17_-_4187106_4187111	0.213724	GLI3	ENST00000574736.1|ANKFY1|ENSG00000185722.18|ankyrin repeat and FYVE domain containing 1
hg38_v1_chr5_-_151141631_151141667	0.213021	GLI3	ENST00000523714.5|ANXA6|ENSG00000197043.14|annexin A6	ENST00000521749.5|ANXA6|ENSG00000197043.14|annexin A6
hg38_v1_chr3_+_124384950_124384961	0.212953	GLI3	ENST00000683146.1|KALRN|ENSG00000160145.16|kalirin RhoGEF kinase
hg38_v1_chr11_+_63506073_63506153	0.212801	GLI3	ENST00000255684.10|LGALS12|ENSG00000133317.16|galectin 12	ENST00000394618.9|LGALS12|ENSG00000133317.16|galectin 12
hg38_v1_chr2_+_170816562_170816743	0.212691	GLI3	ENST00000625689.2|GAD1|ENSG00000128683.14|glutamate decarboxylase 1	ENST00000375272.5|GAD1|ENSG00000128683.14|glutamate decarboxylase 1
hg38_v1_chr1_+_15153698_15153780	0.211789	GLI3	ENST00000400796.7|TMEM51|ENSG00000171729.14|transmembrane protein 51	ENST00000376008.3|TMEM51|ENSG00000171729.14|transmembrane protein 51	ENST00000434578.6|TMEM51|ENSG00000171729.14|transmembrane protein 51
hg38_v1_chr15_-_31160954_31161106	0.211698	GLI3	ENST00000558445.5|TRPM1|ENSG00000134160.15|transient receptor potential cation channel subfamily M member 1	ENST00000559177.5|TRPM1|ENSG00000134160.15|transient receptor potential cation channel subfamily M member 1
hg38_v1_chr10_+_11017863_11017970	0.21024	GLI3	ENST00000633077.1|CELF2|ENSG00000048740.18|CUGBP Elav-like family member 2	ENST00000542579.5|CELF2|ENSG00000048740.18|CUGBP Elav-like family member 2	ENST00000632065.1|CELF2|ENSG00000048740.18|CUGBP Elav-like family member 2
hg38_v1_chr2_+_65228122_65228176	0.209872	GLI3	ENST00000542850.2|ACTR2|ENSG00000138071.14|actin related protein 2
hg38_v1_chr3_-_197299281_197299332	0.209458	GLI3	ENST00000419354.5|DLG1|ENSG00000075711.21|discs large MAGUK scaffold protein 1	ENST00000667104.1|DLG1|ENSG00000075711.21|discs large MAGUK scaffold protein 1	ENST00000658701.1|DLG1|ENSG00000075711.21|discs large MAGUK scaffold protein 1
hg38_v1_chr15_-_28532971_28532971	0.209316	GLI3	ENST00000525590.2|GOLGA8G|ENSG00000183629.13|golgin A8 family member G
hg38_v1_chrX_-_152709260_152709265	0.209277	GLI3	ENST00000535353.3|CSAG2|ENSG00000268902.3|CSAG family member 2	ENST00000638741.1|CSAG2|ENSG00000268902.3|CSAG family member 2	ENST00000640702.1|CSAG2|ENSG00000268902.3|CSAG family member 2
hg38_v1_chrX_+_48383516_48383546	0.209018	GLI3	ENST00000620320.4|SSX4|ENSG00000268009.6|SSX family member 4	ENST00000595689.3|SSX4|ENSG00000268009.6|SSX family member 4
hg38_v1_chr1_-_25906411_25906432	0.208963	GLI3	ENST00000455785.7|STMN1|ENSG00000117632.23|stathmin 1
hg38_v1_chr11_-_3057386_3057433	0.208948	GLI3	ENST00000529772.5|CARS1|ENSG00000110619.18|cysteinyl-tRNA synthetase 1	ENST00000278224.13|CARS1|ENSG00000110619.18|cysteinyl-tRNA synthetase 1	ENST00000380525.9|CARS1|ENSG00000110619.18|cysteinyl-tRNA synthetase 1
hg38_v1_chr11_-_111913195_111913347	0.208799	GLI3	ENST00000531198.5|CRYAB|ENSG00000109846.9|crystallin alpha B	ENST00000616970.5|CRYAB|ENSG00000109846.9|crystallin alpha B	ENST00000527899.6|CRYAB|ENSG00000109846.9|crystallin alpha B
hg38_v1_chr16_+_4476340_4476459	0.208045	GLI3	ENST00000458134.7|HMOX2|ENSG00000103415.12|heme oxygenase 2	ENST00000619528.4|HMOX2|ENSG00000103415.12|heme oxygenase 2	ENST00000619913.4|HMOX2|ENSG00000103415.12|heme oxygenase 2	ENST00000219700.10|HMOX2|ENSG00000103415.12|heme oxygenase 2	ENST00000570646.6|HMOX2|ENSG00000103415.12|heme oxygenase 2	ENST00000575120.5|HMOX2|ENSG00000103415.12|heme oxygenase 2	ENST00000572812.5|HMOX2|ENSG00000103415.12|heme oxygenase 2	ENST00000574466.5|HMOX2|ENSG00000103415.12|heme oxygenase 2	ENST00000576827.5|HMOX2|ENSG00000103415.12|heme oxygenase 2	ENST00000570445.5|HMOX2|ENSG00000103415.12|heme oxygenase 2
hg38_v1_chr9_+_100427254_100427319	0.207965	GLI3	ENST00000374885.5|MSANTD3|ENSG00000066697.15|Myb/SANT DNA binding domain containing 3
hg38_v1_chr20_+_63554142_63554165	0.206082	GLI3	ENST00000370097.2|FNDC11|ENSG00000125531.7|fibronectin type III domain containing 11
hg38_v1_chr4_-_175812746_175812755	0.206054	GLI3	ENST00000393658.6|GPM6A|ENSG00000150625.16|glycoprotein M6A
hg38_v1_chr9_+_100427123_100427173	0.205588	GLI3	ENST00000395067.7|MSANTD3|ENSG00000066697.15|Myb/SANT DNA binding domain containing 3
hg38_v1_chr10_-_95290992_95291015	0.205311	GLI3	ENST00000329399.7|PDLIM1|ENSG00000107438.9|PDZ and LIM domain 1
hg38_v1_chr3_-_195811916_195811939	0.204943	GLI3	ENST00000463781.8|MUC4|ENSG00000145113.22|mucin 4, cell surface associated
hg38_v1_chr1_-_241357085_241357157	0.204731	GLI3	ENST00000366564.5|RGS7|ENSG00000182901.17|regulator of G protein signaling 7
hg38_v1_chr1_-_11805924_11805948	0.204467	GLI3	ENST00000418034.1|MTHFR|ENSG00000177000.13|methylenetetrahydrofolate reductase
hg38_v1_chr21_-_32612535_32612573	0.204348	GLI3	ENST00000673945.1|CFAP298-TCP10L|ENSG00000265590.10|CFAP298-TCP10L readthrough	ENST00000458138.1|CFAP298|ENSG00000159079.19|cilia and flagella associated protein 298
hg38_v1_chr1_-_161631152_161631184	0.204026	GLI3	ENST00000421702.3|FCGR3B|ENSG00000162747.12|Fc fragment of IgG receptor IIIb	ENST00000650385.1|FCGR3B|ENSG00000162747.12|Fc fragment of IgG receptor IIIb
hg38_v1_chr1_+_15152558_15152577	0.204022	GLI3	ENST00000376014.7|TMEM51|ENSG00000171729.14|transmembrane protein 51	ENST00000451326.6|TMEM51|ENSG00000171729.14|transmembrane protein 51
hg38_v1_chr6_-_3751703_3751720	0.203542	GLI3	ENST00000380283.5|PXDC1|ENSG00000168994.14|PX domain containing 1
hg38_v1_chr11_+_46380932_46380953	0.202951	GLI3	ENST00000441869.5|MDK|ENSG00000110492.16|midkine
hg38_v1_chr19_-_38256513_38256532	0.202272	GLI3	ENST00000347262.8|PPP1R14A|ENSG00000167641.11|protein phosphatase 1 regulatory inhibitor subunit 14A	ENST00000591585.1|PPP1R14A|ENSG00000167641.11|protein phosphatase 1 regulatory inhibitor subunit 14A
hg38_v1_chr6_-_110179623_110179687	0.202128	GLI3	ENST00000265601.7|WASF1|ENSG00000112290.13|WASP family member 1	ENST00000447287.5|WASF1|ENSG00000112290.13|WASP family member 1	ENST00000392589.6|WASF1|ENSG00000112290.13|WASP family member 1	ENST00000444391.5|WASF1|ENSG00000112290.13|WASP family member 1
hg38_v1_chr19_+_4969105_4969132	0.202009	GLI3	ENST00000611640.4|KDM4B|ENSG00000127663.15|lysine demethylase 4B	ENST00000159111.9|KDM4B|ENSG00000127663.15|lysine demethylase 4B	ENST00000588337.5|KDM4B|ENSG00000127663.15|lysine demethylase 4B	ENST00000381759.8|KDM4B|ENSG00000127663.15|lysine demethylase 4B
hg38_v1_chr10_+_74151202_74151231	0.201681	GLI3	ENST00000672429.1|ADK|ENSG00000156110.15|adenosine kinase	ENST00000539909.6|ADK|ENSG00000156110.15|adenosine kinase	ENST00000286621.7|ADK|ENSG00000156110.15|adenosine kinase
hg38_v1_chr17_+_67377272_67377348	0.201356	GLI3	ENST00000581322.6|PITPNC1|ENSG00000154217.15|phosphatidylinositol transfer protein cytoplasmic 1	ENST00000299954.13|PITPNC1|ENSG00000154217.15|phosphatidylinositol transfer protein cytoplasmic 1
hg38_v1_chr20_+_833781_833809	0.200966	GLI3	ENST00000381939.1|FAM110A|ENSG00000125898.13|family with sequence similarity 110 member A
hg38_v1_chr4_-_48906805_48906828	0.200535	GLI3	ENST00000620187.4|OCIAD2|ENSG00000145247.12|OCIA domain containing 2
hg38_v1_chr17_+_19533818_19533884	0.20024	GLI3	ENST00000436810.6|SLC47A1|ENSG00000142494.13|solute carrier family 47 member 1	ENST00000270570.8|SLC47A1|ENSG00000142494.13|solute carrier family 47 member 1	ENST00000575023.5|SLC47A1|ENSG00000142494.13|solute carrier family 47 member 1	ENST00000395585.5|SLC47A1|ENSG00000142494.13|solute carrier family 47 member 1
hg38_v1_chr13_+_32315468_32315543	0.200014	GLI3	ENST00000530893.6|BRCA2|ENSG00000139618.17|BRCA2 DNA repair associated	ENST00000380152.8|BRCA2|ENSG00000139618.17|BRCA2 DNA repair associated
hg38_v1_chr1_-_155255441_155255489	0.199397	GLI3	ENST00000361361.7|FAM189B|ENSG00000160767.21|family with sequence similarity 189 member B	ENST00000621094.4|FAM189B|ENSG00000160767.21|family with sequence similarity 189 member B
hg38_v1_chr21_+_45848160_45848168	0.198759	GLI3	ENST00000400310.5|PCBP3|ENSG00000183570.17|poly(rC) binding protein 3
hg38_v1_chr1_+_202122881_202122901	0.198159	GLI3	ENST00000683302.1|GPR37L1|ENSG00000170075.10|G protein-coupled receptor 37 like 1	ENST00000683557.1|GPR37L1|ENSG00000170075.10|G protein-coupled receptor 37 like 1
hg38_v1_chr14_+_103100328_103100328	0.197878	GLI3	ENST00000559116.1|EXOC3L4|ENSG00000205436.7|exocyst complex component 3 like 4
hg38_v1_chr6_-_89118002_89118087	0.197553	GLI3	ENST00000452027.3|SRSF12|ENSG00000154548.9|serine and arginine rich splicing factor 12
hg38_v1_chr9_+_5231413_5231425	0.197218	GLI3	ENST00000239316.4|INSL4|ENSG00000120211.4|insulin like 4
hg38_v1_chr11_+_65833944_65833975	0.196838	GLI3	ENST00000308342.7|SNX32|ENSG00000172803.18|sorting nexin 32
hg38_v1_chr1_-_161631032_161631133	0.196511	GLI3	ENST00000534776.1|FCGR3B|ENSG00000162747.12|Fc fragment of IgG receptor IIIb	ENST00000613418.4|FCGR3B|ENSG00000162747.12|Fc fragment of IgG receptor IIIb	ENST00000614870.4|FCGR3B|ENSG00000162747.12|Fc fragment of IgG receptor IIIb
hg38_v1_chr22_+_37639660_37639700	0.196483	GLI3	ENST00000649765.2|SH3BP1|ENSG00000100092.24|SH3 domain binding protein 1	ENST00000451997.6|ENSG00000285304.1|ENSG00000285304.1|novel protein
hg38_v1_chr13_-_98752619_98752691	0.196129	GLI3	ENST00000376503.10|SLC15A1|ENSG00000088386.17|solute carrier family 15 member 1
hg38_v1_chr2_+_219418369_219418386	0.195622	GLI3	ENST00000373960.4|DES|ENSG00000175084.13|desmin
hg38_v1_chr22_-_19524400_19524416	0.195484	GLI3	ENST00000618236.2|CLDN5|ENSG00000184113.10|claudin 5
hg38_v1_chr7_-_100168602_100168645	0.195197	GLI3	ENST00000423751.2|GAL3ST4|ENSG00000197093.11|galactose-3-O-sulfotransferase 4	ENST00000360039.9|GAL3ST4|ENSG00000197093.11|galactose-3-O-sulfotransferase 4
hg38_v1_chr17_-_28370283_28370313	0.194953	GLI3	ENST00000226218.9|VTN|ENSG00000109072.14|vitronectin
hg38_v1_chr5_-_180810086_180810148	0.194943	GLI3	ENST00000506889.1|MGAT1|ENSG00000131446.17|alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	ENST00000393340.7|MGAT1|ENSG00000131446.17|alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
hg38_v1_chr11_+_22193009_22193109	0.194725	GLI3	ENST00000682341.1|ANO5|ENSG00000171714.13|anoctamin 5	ENST00000684663.1|ANO5|ENSG00000171714.13|anoctamin 5	ENST00000683411.1|ANO5|ENSG00000171714.13|anoctamin 5	ENST00000324559.9|ANO5|ENSG00000171714.13|anoctamin 5
hg38_v1_chr17_+_4833331_4833425	0.194529	GLI3	ENST00000355280.11|MINK1|ENSG00000141503.17|misshapen like kinase 1	ENST00000347992.11|MINK1|ENSG00000141503.17|misshapen like kinase 1
hg38_v1_chr19_+_49496424_49496454	0.194105	GLI3	ENST00000596873.1|RPS11|ENSG00000142534.7|ribosomal protein S11	ENST00000594493.1|RPS11|ENSG00000142534.7|ribosomal protein S11	ENST00000270625.7|RPS11|ENSG00000142534.7|ribosomal protein S11	ENST00000599561.1|RPS11|ENSG00000142534.7|ribosomal protein S11
hg38_v1_chr19_+_35000426_35000470	0.194018	GLI3	ENST00000411896.6|GRAMD1A|ENSG00000089351.15|GRAM domain containing 1A	ENST00000424536.2|GRAMD1A|ENSG00000089351.15|GRAM domain containing 1A
hg38_v1_chr17_+_15945101_15945139	0.193844	GLI3	ENST00000304222.3|ADORA2B|ENSG00000170425.4|adenosine A2b receptor
hg38_v1_chr19_-_2051224_2051253	0.193146	GLI3	ENST00000309340.11|MKNK2|ENSG00000099875.16|MAPK interacting serine/threonine kinase 2	ENST00000589534.2|MKNK2|ENSG00000099875.16|MAPK interacting serine/threonine kinase 2	ENST00000250896.9|MKNK2|ENSG00000099875.16|MAPK interacting serine/threonine kinase 2	ENST00000589509.5|MKNK2|ENSG00000099875.16|MAPK interacting serine/threonine kinase 2
hg38_v1_chr12_-_52493250_52493265	0.192772	GLI3	ENST00000330722.7|KRT6A|ENSG00000205420.11|keratin 6A
hg38_v1_chr9_-_120914549_120914587	0.192612	GLI3	ENST00000546084.5|TRAF1|ENSG00000056558.11|TNF receptor associated factor 1
hg38_v1_chrX_-_23743201_23743302	0.192399	GLI3	ENST00000492081.1|ACOT9|ENSG00000123130.17|acyl-CoA thioesterase 9	ENST00000379303.10|ACOT9|ENSG00000123130.17|acyl-CoA thioesterase 9	ENST00000336430.11|ACOT9|ENSG00000123130.17|acyl-CoA thioesterase 9
hg38_v1_chr3_+_124384757_124384768	0.192132	GLI3	ENST00000684374.1|KALRN|ENSG00000160145.16|kalirin RhoGEF kinase
hg38_v1_chr17_-_8630713_8630738	0.192105	GLI3	ENST00000411957.1|MYH10|ENSG00000133026.13|myosin heavy chain 10	ENST00000360416.8|MYH10|ENSG00000133026.13|myosin heavy chain 10
hg38_v1_chr9_+_70043840_70043855	0.191933	GLI3	ENST00000377182.5|MAMDC2|ENSG00000165072.10|MAM domain containing 2
hg38_v1_chr6_+_125153846_125153900	0.191487	GLI3	ENST00000528193.5|TPD52L1|ENSG00000111907.21|TPD52 like 1
hg38_v1_chr8_+_39107529_39107721	0.190751	GLI3	ENST00000399831.7|ADAM32|ENSG00000197140.15|ADAM metallopeptidase domain 32	ENST00000437682.6|ADAM32|ENSG00000197140.15|ADAM metallopeptidase domain 32	ENST00000519315.5|ADAM32|ENSG00000197140.15|ADAM metallopeptidase domain 32
hg38_v1_chr8_-_118621901_118621984	0.190533	GLI3	ENST00000409003.5|SAMD12|ENSG00000177570.15|sterile alpha motif domain containing 12	ENST00000524796.6|SAMD12|ENSG00000177570.15|sterile alpha motif domain containing 12	ENST00000314727.9|SAMD12|ENSG00000177570.15|sterile alpha motif domain containing 12
hg38_v1_chrX_-_7927701_7927739	0.189819	GLI3	ENST00000537427.5|PNPLA4|ENSG00000006757.12|patatin like phospholipase domain containing 4	ENST00000444736.5|PNPLA4|ENSG00000006757.12|patatin like phospholipase domain containing 4	ENST00000442940.1|PNPLA4|ENSG00000006757.12|patatin like phospholipase domain containing 4
hg38_v1_chr11_+_49027501_49027501	0.189799	GLI3	ENST00000622138.4|TRIM49B|ENSG00000182053.13|tripartite motif containing 49B
hg38_v1_chr3_-_15099122_15099163	0.189568	GLI3	ENST00000507357.1|RBSN|ENSG00000131381.12|rabenosyn, RAB effector	ENST00000449050.5|RBSN|ENSG00000131381.12|rabenosyn, RAB effector	ENST00000253699.7|RBSN|ENSG00000131381.12|rabenosyn, RAB effector	ENST00000476527.6|RBSN|ENSG00000131381.12|rabenosyn, RAB effector
hg38_v1_chr19_+_58467045_58467089	0.188238	GLI3	ENST00000535298.5|ZNF324|ENSG00000083812.12|zinc finger protein 324	ENST00000536459.6|ZNF324|ENSG00000083812.12|zinc finger protein 324	ENST00000196482.4|ZNF324|ENSG00000083812.12|zinc finger protein 324
hg38_v1_chr16_-_75251482_75251662	0.188018	GLI3	ENST00000393420.10|BCAR1|ENSG00000050820.17|BCAR1 scaffold protein, Cas family member	ENST00000162330.10|BCAR1|ENSG00000050820.17|BCAR1 scaffold protein, Cas family member
hg38_v1_chr13_+_32315071_32315099	0.186994	GLI3	ENST00000544455.6|BRCA2|ENSG00000139618.17|BRCA2 DNA repair associated
hg38_v1_chr3_-_122564253_122564315	0.186881	GLI3	ENST00000492382.5|PARP9|ENSG00000138496.17|poly(ADP-ribose) polymerase family member 9	ENST00000682323.1|PARP9|ENSG00000138496.17|poly(ADP-ribose) polymerase family member 9	ENST00000462315.5|PARP9|ENSG00000138496.17|poly(ADP-ribose) polymerase family member 9
hg38_v1_chr17_+_41966814_41966882	0.186599	GLI3	ENST00000393888.1|CNP|ENSG00000173786.17|2',3'-cyclic nucleotide 3' phosphodiesterase	ENST00000441615.2|CNP|ENSG00000173786.17|2',3'-cyclic nucleotide 3' phosphodiesterase
hg38_v1_chr11_+_63506339_63506363	0.1862	GLI3	ENST00000340246.10|LGALS12|ENSG00000133317.16|galectin 12
hg38_v1_chr11_-_65857763_65857868	0.186024	GLI3	ENST00000531407.5|CFL1|ENSG00000172757.13|cofilin 1
hg38_v1_chr1_-_20508095_20508157	0.185973	GLI3	ENST00000264198.5|MUL1|ENSG00000090432.7|mitochondrial E3 ubiquitin protein ligase 1
hg38_v1_chr16_-_11851513_11851561	0.18551	GLI3	ENST00000573251.5|RSL1D1|ENSG00000171490.13|ribosomal L1 domain containing 1	ENST00000571133.6|RSL1D1|ENSG00000171490.13|ribosomal L1 domain containing 1	ENST00000355674.9|RSL1D1|ENSG00000171490.13|ribosomal L1 domain containing 1
hg38_v1_chr2_-_223837484_223837550	0.185072	GLI3	ENST00000446015.6|AP1S3|ENSG00000152056.17|adaptor related protein complex 1 subunit sigma 3	ENST00000409375.1|AP1S3|ENSG00000152056.17|adaptor related protein complex 1 subunit sigma 3
hg38_v1_chr9_-_35958154_35958154	0.185066	GLI3	ENST00000341959.2|OR2S2|ENSG00000278889.4|olfactory receptor family 2 subfamily S member 2
hg38_v1_chr4_-_993376_993413	0.185051	GLI3	ENST00000398520.6|SLC26A1|ENSG00000145217.14|solute carrier family 26 member 1	ENST00000398516.3|SLC26A1|ENSG00000145217.14|solute carrier family 26 member 1
hg38_v1_chrX_-_135022473_135022558	0.185031	GLI3	ENST00000391440.3|RTL8B|ENSG00000212747.5|retrotransposon Gag like 8B
hg38_v1_chr5_-_151080978_151081084	0.184651	GLI3	ENST00000520931.5|TNIP1|ENSG00000145901.16|TNFAIP3 interacting protein 1	ENST00000521591.6|TNIP1|ENSG00000145901.16|TNFAIP3 interacting protein 1	ENST00000520695.5|TNIP1|ENSG00000145901.16|TNFAIP3 interacting protein 1	ENST00000610535.5|TNIP1|ENSG00000145901.16|TNFAIP3 interacting protein 1	ENST00000518977.5|TNIP1|ENSG00000145901.16|TNFAIP3 interacting protein 1	ENST00000389378.6|TNIP1|ENSG00000145901.16|TNFAIP3 interacting protein 1	ENST00000610874.4|TNIP1|ENSG00000145901.16|TNFAIP3 interacting protein 1
hg38_v1_chr1_-_47231715_47231786	0.184246	GLI3	ENST00000371884.6|TAL1|ENSG00000162367.11|TAL bHLH transcription factor 1, erythroid differentiation factor
hg38_v1_chr1_+_15476099_15476106	0.18409	GLI3	ENST00000375910.8|CELA2B|ENSG00000215704.10|chymotrypsin like elastase 2B
hg38_v1_chr2_-_136118142_136118155	0.183137	GLI3	ENST00000241393.4|CXCR4|ENSG00000121966.7|C-X-C motif chemokine receptor 4
hg38_v1_chr6_-_34556319_34556339	0.183008	GLI3	ENST00000374037.8|SPDEF|ENSG00000124664.11|SAM pointed domain containing ETS transcription factor	ENST00000544425.2|SPDEF|ENSG00000124664.11|SAM pointed domain containing ETS transcription factor
hg38_v1_chr6_+_28259285_28259349	0.18209	GLI3	ENST00000343684.4|NKAPL|ENSG00000189134.4|NFKB activating protein like
hg38_v1_chr11_-_101129806_101129822	0.181487	GLI3	ENST00000325455.10|PGR|ENSG00000082175.15|progesterone receptor	ENST00000617858.4|PGR|ENSG00000082175.15|progesterone receptor	ENST00000619228.2|PGR|ENSG00000082175.15|progesterone receptor
hg38_v1_chr2_-_30807411_30807452	0.180753	GLI3	ENST00000295055.12|CAPN13|ENSG00000162949.16|calpain 13
hg38_v1_chr20_-_63463843_63463876	0.18071	GLI3	ENST00000637193.1|KCNQ2|ENSG00000075043.20|potassium voltage-gated channel subfamily Q member 2
hg38_v1_chr9_+_136952256_136952323	0.180627	GLI3	ENST00000371633.8|LCN12|ENSG00000184925.12|lipocalin 12
hg38_v1_chr3_+_10026409_10026499	0.18039	GLI3	ENST00000287647.7|FANCD2|ENSG00000144554.13|FA complementation group D2	ENST00000676013.1|FANCD2|ENSG00000144554.13|FA complementation group D2	ENST00000675286.1|FANCD2|ENSG00000144554.13|FA complementation group D2	ENST00000419585.5|FANCD2|ENSG00000144554.13|FA complementation group D2
hg38_v1_chr1_+_36155930_36155978	0.180115	GLI3	ENST00000316156.8|MAP7D1|ENSG00000116871.16|MAP7 domain containing 1
hg38_v1_chr1_-_11805977_11806063	0.180007	GLI3	ENST00000376486.3|MTHFR|ENSG00000177000.13|methylenetetrahydrofolate reductase
hg38_v1_chrY_+_6246223_6246269	0.179885	GLI3	ENST00000429039.5|TSPY2|ENSG00000168757.12|testis specific protein Y-linked 2	ENST00000320701.8|TSPY2|ENSG00000168757.12|testis specific protein Y-linked 2	ENST00000383042.1|TSPY2|ENSG00000168757.12|testis specific protein Y-linked 2
hg38_v1_chr17_+_41966787_41966804	0.17906	GLI3	ENST00000393892.8|CNP|ENSG00000173786.17|2',3'-cyclic nucleotide 3' phosphodiesterase	ENST00000587679.1|CNP|ENSG00000173786.17|2',3'-cyclic nucleotide 3' phosphodiesterase
hg38_v1_chr6_+_42916046_42916066	0.178448	GLI3	ENST00000304672.6|PTCRA|ENSG00000171611.10|pre T cell antigen receptor alpha
hg38_v1_chr12_+_31073849_31073900	0.17837	GLI3	ENST00000228264.10|DDX11|ENSG00000013573.17|DEAD/H-box helicase 11	ENST00000542838.6|DDX11|ENSG00000013573.17|DEAD/H-box helicase 11	ENST00000438391.6|DDX11|ENSG00000013573.17|DEAD/H-box helicase 11	ENST00000415475.6|DDX11|ENSG00000013573.17|DEAD/H-box helicase 11	ENST00000545668.5|DDX11|ENSG00000013573.17|DEAD/H-box helicase 11	ENST00000350437.8|DDX11|ENSG00000013573.17|DEAD/H-box helicase 11
hg38_v1_chr6_-_30932147_30932181	0.178349	GLI3	ENST00000359086.4|SFTA2|ENSG00000196260.5|surfactant associated 2
hg38_v1_chr14_+_103100144_103100144	0.178121	GLI3	ENST00000380069.7|EXOC3L4|ENSG00000205436.7|exocyst complex component 3 like 4
hg38_v1_chr9_+_130200375_130200432	0.178092	GLI3	ENST00000630865.1|NCS1|ENSG00000107130.10|neuronal calcium sensor 1
hg38_v1_chr19_-_11262499_11262533	0.178016	GLI3	ENST00000294618.12|DOCK6|ENSG00000130158.14|dedicator of cytokinesis 6
hg38_v1_chr11_-_71448406_71448440	0.177837	GLI3	ENST00000682708.1|DHCR7|ENSG00000172893.17|7-dehydrocholesterol reductase	ENST00000683287.1|DHCR7|ENSG00000172893.17|7-dehydrocholesterol reductase	ENST00000683714.1|DHCR7|ENSG00000172893.17|7-dehydrocholesterol reductase	ENST00000682880.1|DHCR7|ENSG00000172893.17|7-dehydrocholesterol reductase
hg38_v1_chr11_-_35420017_35420031	0.177603	GLI3	ENST00000643000.1|SLC1A2|ENSG00000110436.13|solute carrier family 1 member 2	ENST00000646099.1|SLC1A2|ENSG00000110436.13|solute carrier family 1 member 2	ENST00000647372.1|SLC1A2|ENSG00000110436.13|solute carrier family 1 member 2	ENST00000642578.1|SLC1A2|ENSG00000110436.13|solute carrier family 1 member 2
hg38_v1_chr15_+_40894410_40894488	0.177228	GLI3	ENST00000220509.10|VPS18|ENSG00000104142.11|VPS18 core subunit of CORVET and HOPS complexes	ENST00000558474.1|VPS18|ENSG00000104142.11|VPS18 core subunit of CORVET and HOPS complexes
hg38_v1_chr22_-_41589794_41589848	0.176533	GLI3	ENST00000216259.8|PMM1|ENSG00000100417.12|phosphomannomutase 1
hg38_v1_chr14_-_38256074_38256101	0.176127	GLI3	ENST00000342213.3|CLEC14A|ENSG00000176435.7|C-type lectin domain containing 14A
hg38_v1_chr16_+_56657924_56657967	0.175977	GLI3	ENST00000334350.7|MT1F|ENSG00000198417.7|metallothionein 1F
hg38_v1_chr9_-_111038037_111038048	0.175658	GLI3	ENST00000374431.7|LPAR1|ENSG00000198121.14|lysophosphatidic acid receptor 1
hg38_v1_chr8_-_142614469_142614485	0.175548	GLI3	ENST00000356613.4|ARC|ENSG00000198576.4|activity regulated cytoskeleton associated protein
hg38_v1_chr2_+_126898908_126898920	0.174967	GLI3	ENST00000450035.5|TEX51|ENSG00000237524.10|testis expressed 51
hg38_v1_chr12_-_30754927_30754960	0.174912	GLI3	ENST00000541765.5|CAPRIN2|ENSG00000110888.17|caprin family member 2	ENST00000537108.5|CAPRIN2|ENSG00000110888.17|caprin family member 2
hg38_v1_chr11_+_22193119_22193131	0.174716	GLI3	ENST00000683437.1|ANO5|ENSG00000171714.13|anoctamin 5
hg38_v1_chr3_-_108757407_108757410	0.17455	GLI3	ENST00000295755.7|RETNLB|ENSG00000163515.7|resistin like beta
hg38_v1_chr20_-_23750929_23750940	0.173764	GLI3	ENST00000304749.7|CST1|ENSG00000170373.9|cystatin SN
hg38_v1_chr2_-_86861871_86861924	0.173752	GLI3	ENST00000390655.12|CD8B|ENSG00000172116.23|CD8b molecule	ENST00000393759.6|CD8B|ENSG00000172116.23|CD8b molecule	ENST00000349455.7|CD8B|ENSG00000172116.23|CD8b molecule	ENST00000331469.6|CD8B|ENSG00000172116.23|CD8b molecule	ENST00000393761.6|CD8B|ENSG00000172116.23|CD8b molecule	ENST00000431506.3|CD8B|ENSG00000172116.23|CD8b molecule
hg38_v1_chr14_-_100587404_100587430	0.173543	GLI3	ENST00000554140.2|BEGAIN|ENSG00000183092.17|brain enriched guanylate kinase associated
hg38_v1_chr19_+_1275508_1275587	0.17348	GLI3	ENST00000409293.6|FAM174C|ENSG00000228300.14|family with sequence similarity 174 member C
hg38_v1_chrY_+_14056226_14056229	0.17301	GLI3	ENST00000250823.5|VCY1B|ENSG00000129862.7|variable charge Y-linked 1B
hg38_v1_chr19_-_12919256_12919302	0.173006	GLI3	ENST00000293695.8|SYCE2|ENSG00000161860.8|synaptonemal complex central element protein 2
hg38_v1_chr11_-_116823293_116823313	0.172586	GLI3	ENST00000357780.5|APOA4|ENSG00000110244.7|apolipoprotein A4
hg38_v1_chr15_-_74367637_74367652	0.1724	GLI3	ENST00000268053.11|CYP11A1|ENSG00000140459.18|cytochrome P450 family 11 subfamily A member 1	ENST00000416978.1|CYP11A1|ENSG00000140459.18|cytochrome P450 family 11 subfamily A member 1
hg38_v1_chr7_-_22500152_22500205	0.171886	GLI3	ENST00000406890.6|STEAP1B|ENSG00000105889.16|STEAP family member 1B	ENST00000678116.1|STEAP1B|ENSG00000105889.16|STEAP family member 1B	ENST00000424363.5|STEAP1B|ENSG00000105889.16|STEAP family member 1B
hg38_v1_chr20_+_1266263_1266350	0.171774	GLI3	ENST00000649598.1|SNPH|ENSG00000101298.15|syntaphilin	ENST00000381867.6|SNPH|ENSG00000101298.15|syntaphilin	ENST00000381873.7|SNPH|ENSG00000101298.15|syntaphilin
hg38_v1_chr19_-_18086904_18086940	0.171692	GLI3	ENST00000322153.11|IL12RB1|ENSG00000096996.16|interleukin 12 receptor subunit beta 1	ENST00000593993.7|IL12RB1|ENSG00000096996.16|interleukin 12 receptor subunit beta 1
hg38_v1_chr7_-_102543849_102543849	0.170955	GLI3	ENST00000644544.1|UPK3BL2|ENSG00000284981.1|uroplakin 3B like 2
hg38_v1_chr9_+_133356536_133356599	0.170527	GLI3	ENST00000371964.5|SURF2|ENSG00000148291.10|surfeit 2
hg38_v1_chr3_-_62875029_62875197	0.170034	GLI3	ENST00000490353.2|CADPS|ENSG00000163618.18|calcium dependent secretion activator
hg38_v1_chr3_-_58211212_58211228	0.169881	GLI3	ENST00000461914.7|DNASE1L3|ENSG00000163687.14|deoxyribonuclease 1 like 3
hg38_v1_chr17_-_7627803_7627879	0.169532	GLI3	ENST00000573566.1|SAT2|ENSG00000141504.12|spermidine/spermine N1-acetyltransferase family member 2	ENST00000269298.10|SAT2|ENSG00000141504.12|spermidine/spermine N1-acetyltransferase family member 2
hg38_v1_chr5_-_180209145_180209220	0.169338	GLI3	ENST00000615330.4|RASGEF1C|ENSG00000146090.16|RasGEF domain family member 1C	ENST00000361132.9|RASGEF1C|ENSG00000146090.16|RasGEF domain family member 1C
hg38_v1_chr8_+_22570944_22571116	0.168803	GLI3	ENST00000517962.1|SORBS3|ENSG00000120896.14|sorbin and SH3 domain containing 3
hg38_v1_chr17_+_67377413_67377461	0.168659	GLI3	ENST00000580974.5|PITPNC1|ENSG00000154217.15|phosphatidylinositol transfer protein cytoplasmic 1
hg38_v1_chr17_+_38925168_38925168	0.168101	GLI3	ENST00000583195.2|LINC00672|ENSG00000263874.2|long intergenic non-protein coding RNA 672
hg38_v1_chr1_-_243255170_243255290	0.167883	GLI3	ENST00000366542.6|CEP170|ENSG00000143702.16|centrosomal protein 170
hg38_v1_chrX_-_153673678_153673695	0.167668	GLI3	ENST00000370150.5|PNCK|ENSG00000130822.16|pregnancy up-regulated nonubiquitous CaM kinase
hg38_v1_chr14_-_24634266_24634277	0.167624	GLI3	ENST00000382540.5|GZMB|ENSG00000100453.13|granzyme B
hg38_v1_chr12_+_1691011_1691084	0.167427	GLI3	ENST00000357103.5|ADIPOR2|ENSG00000006831.10|adiponectin receptor 2
hg38_v1_chr22_-_50527689_50527726	0.167326	GLI3	ENST00000652401.1|TYMP|ENSG00000025708.14|thymidine phosphorylase
hg38_v1_chr2_-_72825982_72826052	0.166019	GLI3	ENST00000634650.1|EXOC6B|ENSG00000144036.16|exocyst complex component 6B	ENST00000272427.11|EXOC6B|ENSG00000144036.16|exocyst complex component 6B	ENST00000410104.1|EXOC6B|ENSG00000144036.16|exocyst complex component 6B
hg38_v1_chr9_+_15553002_15553103	0.165841	GLI3	ENST00000380701.8|CCDC171|ENSG00000164989.17|coiled-coil domain containing 171
hg38_v1_chr19_+_39498938_39498968	0.165701	GLI3	ENST00000356433.10|DLL3|ENSG00000090932.11|delta like canonical Notch ligand 3	ENST00000596614.5|DLL3|ENSG00000090932.11|delta like canonical Notch ligand 3	ENST00000205143.4|DLL3|ENSG00000090932.11|delta like canonical Notch ligand 3
hg38_v1_chr19_-_53267723_53267723	0.165461	GLI3	ENST00000311170.5|VN1R4|ENSG00000228567.3|vomeronasal 1 receptor 4
hg38_v1_chr8_+_39107722_39107779	0.165251	GLI3	ENST00000379907.9|ADAM32|ENSG00000197140.15|ADAM metallopeptidase domain 32	ENST00000522506.5|ADAM32|ENSG00000197140.15|ADAM metallopeptidase domain 32
hg38_v1_chr17_+_82559340_82559377	0.165247	GLI3	ENST00000531030.5|FOXK2|ENSG00000141568.21|forkhead box K2	ENST00000526383.2|FOXK2|ENSG00000141568.21|forkhead box K2
hg38_v1_chr10_-_27155214_27155266	0.165242	GLI3	ENST00000477432.1|YME1L1|ENSG00000136758.19|YME1 like 1 ATPase
hg38_v1_chr1_-_241357225_241357239	0.165093	GLI3	ENST00000366565.5|RGS7|ENSG00000182901.17|regulator of G protein signaling 7
hg38_v1_chr16_+_28822982_28823148	0.164929	GLI3	ENST00000336783.9|ATXN2L|ENSG00000168488.19|ataxin 2 like	ENST00000340394.12|ATXN2L|ENSG00000168488.19|ataxin 2 like	ENST00000325215.10|ATXN2L|ENSG00000168488.19|ataxin 2 like	ENST00000382686.8|ATXN2L|ENSG00000168488.19|ataxin 2 like	ENST00000395547.6|ATXN2L|ENSG00000168488.19|ataxin 2 like	ENST00000564304.5|ATXN2L|ENSG00000168488.19|ataxin 2 like
hg38_v1_chr14_+_61321571_61321587	0.164174	GLI3	ENST00000332981.11|PRKCH|ENSG00000027075.16|protein kinase C eta
hg38_v1_chr15_-_82699893_82699901	0.164157	GLI3	ENST00000642989.2|AP3B2|ENSG00000103723.17|adaptor related protein complex 3 subunit beta 2
hg38_v1_chr19_+_50649445_50649445	0.164131	GLI3	ENST00000425202.6|C19orf81|ENSG00000235034.7|chromosome 19 open reading frame 81
hg38_v1_chr16_+_2009870_2009927	0.162858	GLI3	ENST00000567649.1|NPW|ENSG00000183971.10|neuropeptide W
hg38_v1_chr13_-_23433735_23433752	0.162561	GLI3	ENST00000423156.2|SACS|ENSG00000151835.17|sacsin molecular chaperone	ENST00000683210.1|SACS|ENSG00000151835.17|sacsin molecular chaperone	ENST00000682775.1|SACS|ENSG00000151835.17|sacsin molecular chaperone	ENST00000684497.1|SACS|ENSG00000151835.17|sacsin molecular chaperone	ENST00000682944.1|SACS|ENSG00000151835.17|sacsin molecular chaperone	ENST00000683489.1|SACS|ENSG00000151835.17|sacsin molecular chaperone	ENST00000684385.1|SACS|ENSG00000151835.17|sacsin molecular chaperone	ENST00000683680.1|SACS|ENSG00000151835.17|sacsin molecular chaperone
hg38_v1_chr14_-_60165293_60165318	0.162228	GLI3	ENST00000554101.5|DHRS7|ENSG00000100612.14|dehydrogenase/reductase 7	ENST00000557137.1|DHRS7|ENSG00000100612.14|dehydrogenase/reductase 7
hg38_v1_chr2_+_264869_264906	0.162065	GLI3	ENST00000272067.10|ACP1|ENSG00000143727.16|acid phosphatase 1	ENST00000407983.7|ACP1|ENSG00000143727.16|acid phosphatase 1
hg38_v1_chr17_-_8630749_8630770	0.162003	GLI3	ENST00000379980.8|MYH10|ENSG00000133026.13|myosin heavy chain 10	ENST00000269243.8|MYH10|ENSG00000133026.13|myosin heavy chain 10
hg38_v1_chr2_-_27071628_27071674	0.161683	GLI3	ENST00000447619.5|OST4|ENSG00000228474.6|oligosaccharyltransferase complex subunit 4, non-catalytic	ENST00000429985.1|OST4|ENSG00000228474.6|oligosaccharyltransferase complex subunit 4, non-catalytic	ENST00000456793.2|OST4|ENSG00000228474.6|oligosaccharyltransferase complex subunit 4, non-catalytic
hg38_v1_chr1_+_86704892_86704901	0.161579	GLI3	ENST00000482504.1|SH3GLB1|ENSG00000097033.14|SH3 domain containing GRB2 like, endophilin B1
hg38_v1_chr11_-_35420050_35420066	0.161307	GLI3	ENST00000395753.6|SLC1A2|ENSG00000110436.13|solute carrier family 1 member 2	ENST00000395750.6|SLC1A2|ENSG00000110436.13|solute carrier family 1 member 2	ENST00000645634.1|SLC1A2|ENSG00000110436.13|solute carrier family 1 member 2
hg38_v1_chr19_+_35000275_35000338	0.161236	GLI3	ENST00000317991.10|GRAMD1A|ENSG00000089351.15|GRAM domain containing 1A	ENST00000680623.1|GRAMD1A|ENSG00000089351.15|GRAM domain containing 1A
hg38_v1_chr3_-_9986682_9986868	0.161156	GLI3	ENST00000429759.5|EMC3|ENSG00000125037.12|ER membrane protein complex subunit 3
hg38_v1_chr16_+_3065610_3065812	0.161086	GLI3	ENST00000530890.5|IL32|ENSG00000008517.19|interleukin 32	ENST00000444393.7|IL32|ENSG00000008517.19|interleukin 32	ENST00000533097.6|IL32|ENSG00000008517.19|interleukin 32	ENST00000008180.13|IL32|ENSG00000008517.19|interleukin 32	ENST00000396890.6|IL32|ENSG00000008517.19|interleukin 32	ENST00000525228.5|IL32|ENSG00000008517.19|interleukin 32	ENST00000525643.7|IL32|ENSG00000008517.19|interleukin 32	ENST00000548652.5|IL32|ENSG00000008517.19|interleukin 32	ENST00000525377.6|IL32|ENSG00000008517.19|interleukin 32	ENST00000530538.6|IL32|ENSG00000008517.19|interleukin 32	ENST00000549213.5|IL32|ENSG00000008517.19|interleukin 32	ENST00000552936.5|IL32|ENSG00000008517.19|interleukin 32	ENST00000548476.5|IL32|ENSG00000008517.19|interleukin 32	ENST00000552664.5|IL32|ENSG00000008517.19|interleukin 32	ENST00000552356.5|IL32|ENSG00000008517.19|interleukin 32	ENST00000551513.5|IL32|ENSG00000008517.19|interleukin 32	ENST00000382213.7|IL32|ENSG00000008517.19|interleukin 32	ENST00000548246.1|IL32|ENSG00000008517.19|interleukin 32
hg38_v1_chr8_-_6938301_6938321	0.160541	GLI3	ENST00000297435.3|DEFA4|ENSG00000164821.5|defensin alpha 4
hg38_v1_chr9_-_111038061_111038093	0.16011	GLI3	ENST00000358883.8|LPAR1|ENSG00000198121.14|lysophosphatidic acid receptor 1
hg38_v1_chr9_-_122093273_122093347	0.159964	GLI3	ENST00000321582.11|TTLL11|ENSG00000175764.16|tubulin tyrosine ligase like 11
hg38_v1_chr7_-_44141285_44141367	0.159816	GLI3	ENST00000458240.5|MYL7|ENSG00000106631.8|myosin light chain 7	ENST00000223364.7|MYL7|ENSG00000106631.8|myosin light chain 7
hg38_v1_chr5_-_141680822_141680872	0.159695	GLI3	ENST00000504448.1|ARAP3|ENSG00000120318.16|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
hg38_v1_chr3_-_187291882_187291987	0.159321	GLI3	ENST00000392470.6|MASP1|ENSG00000127241.18|mannan binding lectin serine peptidase 1	ENST00000169293.10|MASP1|ENSG00000127241.18|mannan binding lectin serine peptidase 1	ENST00000439271.1|MASP1|ENSG00000127241.18|mannan binding lectin serine peptidase 1	ENST00000392472.6|MASP1|ENSG00000127241.18|mannan binding lectin serine peptidase 1	ENST00000392475.2|MASP1|ENSG00000127241.18|mannan binding lectin serine peptidase 1
hg38_v1_chr2_-_24085186_24085215	0.15882	GLI3	ENST00000335934.8|TP53I3|ENSG00000115129.14|tumor protein p53 inducible protein 3
hg38_v1_chr11_+_118606428_118606441	0.158336	GLI3	ENST00000361417.6|PHLDB1|ENSG00000019144.19|pleckstrin homology like domain family B member 1
hg38_v1_chr20_+_37521206_37521261	0.158112	GLI3	ENST00000346199.3|NNAT|ENSG00000053438.11|neuronatin	ENST00000647955.1|NNAT|ENSG00000053438.11|neuronatin	ENST00000649451.1|NNAT|ENSG00000053438.11|neuronatin	ENST00000649697.1|NNAT|ENSG00000053438.11|neuronatin	ENST00000649309.1|NNAT|ENSG00000053438.11|neuronatin
hg38_v1_chr22_-_50526337_50526474	0.157773	GLI3	ENST00000651490.1|TYMP|ENSG00000025708.14|thymidine phosphorylase	ENST00000543927.6|SCO2|ENSG00000284194.3|synthesis of cytochrome C oxidase 2
hg38_v1_chr11_+_22193155_22193185	0.157678	GLI3	ENST00000682266.1|ANO5|ENSG00000171714.13|anoctamin 5	ENST00000683197.1|ANO5|ENSG00000171714.13|anoctamin 5
hg38_v1_chr7_-_151519891_151519907	0.15761	GLI3	ENST00000262187.10|RHEB|ENSG00000106615.10|Ras homolog, mTORC1 binding
hg38_v1_chr10_+_18659382_18659519	0.157601	GLI3	ENST00000377275.4|ARL5B|ENSG00000165997.5|ADP ribosylation factor like GTPase 5B
hg38_v1_chr2_-_197198034_197198054	0.157357	GLI3	ENST00000328737.6|ANKRD44|ENSG00000065413.20|ankyrin repeat domain 44
hg38_v1_chr15_+_90935277_90935292	0.15705	GLI3	ENST00000418476.2|UNC45A|ENSG00000140553.18|unc-45 myosin chaperone A
hg38_v1_chrX_-_153321759_153321774	0.156597	GLI3	ENST00000436629.3|PNMA6F|ENSG00000225110.3|PNMA family member 6F
hg38_v1_chr4_-_75940239_75940265	0.156164	GLI3	ENST00000505594.1|NAAA|ENSG00000138744.16|N-acylethanolamine acid amidase
hg38_v1_chr16_+_31033781_31033805	0.156117	GLI3	ENST00000613541.1|STX4|ENSG00000103496.15|syntaxin 4
hg38_v1_chrX_+_154219756_154219756	0.155611	GLI3	ENST00000369929.8|OPN1MW2|ENSG00000166160.9|opsin 1, medium wave sensitive 2
hg38_v1_chr11_-_71448315_71448403	0.15555	GLI3	ENST00000525346.5|DHCR7|ENSG00000172893.17|7-dehydrocholesterol reductase	ENST00000531364.5|DHCR7|ENSG00000172893.17|7-dehydrocholesterol reductase	ENST00000529990.5|DHCR7|ENSG00000172893.17|7-dehydrocholesterol reductase	ENST00000527316.5|DHCR7|ENSG00000172893.17|7-dehydrocholesterol reductase	ENST00000355527.8|DHCR7|ENSG00000172893.17|7-dehydrocholesterol reductase	ENST00000407721.6|DHCR7|ENSG00000172893.17|7-dehydrocholesterol reductase
hg38_v1_chr22_-_24226112_24226112	0.155062	GLI3	ENST00000425408.5|GGT5|ENSG00000099998.19|gamma-glutamyltransferase 5
hg38_v1_chr19_+_19668877_19668901	0.154784	GLI3	ENST00000415784.6|ZNF101|ENSG00000181896.12|zinc finger protein 101
hg38_v1_chr9_-_133418036_133418096	0.154567	GLI3	ENST00000371935.6|REXO4|ENSG00000148300.12|REX4 homolog, 3'-5' exonuclease
hg38_v1_chr5_+_36166556_36166612	0.154077	GLI3	ENST00000677886.1|SKP2|ENSG00000145604.17|S-phase kinase associated protein 2
hg38_v1_chr2_+_240625237_240625252	0.153696	GLI3	ENST00000407714.1|GPR35|ENSG00000178623.12|G protein-coupled receptor 35
hg38_v1_chr22_-_29838227_29838308	0.15331	GLI3	ENST00000307790.8|ASCC2|ENSG00000100325.15|activating signal cointegrator 1 complex subunit 2	ENST00000397771.6|ASCC2|ENSG00000100325.15|activating signal cointegrator 1 complex subunit 2	ENST00000542393.5|ASCC2|ENSG00000100325.15|activating signal cointegrator 1 complex subunit 2
hg38_v1_chr2_+_201129483_201129503	0.152349	GLI3	ENST00000440180.5|CFLAR|ENSG00000003402.20|CASP8 and FADD like apoptosis regulator
hg38_v1_chr9_+_100442271_100442271	0.152232	GLI3	ENST00000502978.1|MSANTD3-TMEFF1|ENSG00000251349.3|MSANTD3-TMEFF1 readthrough
hg38_v1_chr1_-_119648165_119648291	0.151589	GLI3	ENST00000421812.3|ZNF697|ENSG00000143067.5|zinc finger protein 697
hg38_v1_chr19_-_45423481_45423498	0.151444	GLI3	ENST00000589381.5|ERCC1|ENSG00000012061.16|ERCC excision repair 1, endonuclease non-catalytic subunit
hg38_v1_chr1_+_155308930_155308970	0.151017	GLI3	ENST00000465559.5|FDPS|ENSG00000160752.15|farnesyl diphosphate synthase	ENST00000612683.1|FDPS|ENSG00000160752.15|farnesyl diphosphate synthase
hg38_v1_chr7_-_150801325_150801378	0.150896	GLI3	ENST00000447204.6|TMEM176B|ENSG00000106565.18|transmembrane protein 176B
hg38_v1_chr16_+_89720980_89721021	0.15074	GLI3	ENST00000289816.9|ZNF276|ENSG00000158805.12|zinc finger protein 276	ENST00000568064.5|ZNF276|ENSG00000158805.12|zinc finger protein 276
hg38_v1_chr16_-_2009797_2009835	0.150263	GLI3	ENST00000563630.6|ZNF598|ENSG00000167962.14|zinc finger protein 598, E3 ubiquitin ligase	ENST00000562103.2|ZNF598|ENSG00000167962.14|zinc finger protein 598, E3 ubiquitin ligase
hg38_v1_chr4_-_89837076_89837103	0.149839	GLI3	ENST00000506691.1|SNCA|ENSG00000145335.17|synuclein alpha
hg38_v1_chrX_+_152759218_152759218	0.149365	GLI3	ENST00000599845.3|CSAG3|ENSG00000268916.6|CSAG family member 3	ENST00000638835.1|CSAG3|ENSG00000268916.6|CSAG family member 3
hg38_v1_chr2_-_20012661_20012675	0.149092	GLI3	ENST00000421259.2|MATN3|ENSG00000132031.13|matrilin 3	ENST00000407540.8|MATN3|ENSG00000132031.13|matrilin 3
hg38_v1_chr19_+_41350911_41350966	0.148851	GLI3	ENST00000539627.5|TMEM91|ENSG00000142046.15|transmembrane protein 91
hg38_v1_chr3_+_129543175_129543175	0.148762	GLI3	ENST00000324382.7|H1-8|ENSG00000178804.8|H1.8 linker histone
hg38_v1_chr6_-_166168700_166168727	0.14874	GLI3	ENST00000366871.7|TBXT|ENSG00000164458.10|T-box transcription factor T
hg38_v1_chr1_-_241357171_241357219	0.148415	GLI3	ENST00000440928.6|RGS7|ENSG00000182901.17|regulator of G protein signaling 7
hg38_v1_chr19_-_3546306_3546358	0.147803	GLI3	ENST00000398558.8|MFSD12|ENSG00000161091.14|major facilitator superfamily domain containing 12
hg38_v1_chr12_+_122980060_122980303	0.147365	GLI3	ENST00000543566.6|ARL6IP4|ENSG00000182196.14|ADP ribosylation factor like GTPase 6 interacting protein 4	ENST00000453766.7|ARL6IP4|ENSG00000182196.14|ADP ribosylation factor like GTPase 6 interacting protein 4	ENST00000392435.7|ARL6IP4|ENSG00000182196.14|ADP ribosylation factor like GTPase 6 interacting protein 4	ENST00000413381.6|ARL6IP4|ENSG00000182196.14|ADP ribosylation factor like GTPase 6 interacting protein 4	ENST00000426960.6|ARL6IP4|ENSG00000182196.14|ADP ribosylation factor like GTPase 6 interacting protein 4
hg38_v1_chr17_+_17476980_17477047	0.14736	GLI3	ENST00000580462.1|MED9|ENSG00000141026.6|mediator complex subunit 9	ENST00000268711.4|MED9|ENSG00000141026.6|mediator complex subunit 9
hg38_v1_chrX_-_135052114_135052195	0.147233	GLI3	ENST00000370775.3|RTL8A|ENSG00000203950.7|retrotransposon Gag like 8A
hg38_v1_chr14_+_95876762_95876778	0.146585	GLI3	ENST00000503525.2|TUNAR|ENSG00000250366.3|TCL1 upstream neural differentiation-associated RNA
hg38_v1_chr2_-_130509287_130509328	0.146407	GLI3	ENST00000615053.3|POTEI|ENSG00000196834.13|POTE ankyrin domain family member I	ENST00000631234.1|POTEI|ENSG00000196834.13|POTE ankyrin domain family member I	ENST00000451531.7|POTEI|ENSG00000196834.13|POTE ankyrin domain family member I
hg38_v1_chr1_+_203128279_203128373	0.146335	GLI3	ENST00000367235.1|ADORA1|ENSG00000163485.17|adenosine A1 receptor	ENST00000618295.1|ADORA1|ENSG00000163485.17|adenosine A1 receptor
hg38_v1_chr13_-_23433676_23433734	0.146076	GLI3	ENST00000682547.1|SACS|ENSG00000151835.17|sacsin molecular chaperone	ENST00000455470.6|SACS|ENSG00000151835.17|sacsin molecular chaperone	ENST00000382292.9|SACS|ENSG00000151835.17|sacsin molecular chaperone
hg38_v1_chrX_-_1537165_1537192	0.146059	GLI3	ENST00000381297.10|P2RY8|ENSG00000182162.11|P2Y receptor family member 8
hg38_v1_chr1_-_161044941_161044998	0.145591	GLI3	ENST00000368020.5|USF1|ENSG00000158773.14|upstream transcription factor 1
hg38_v1_chr17_+_42017020_42017094	0.144175	GLI3	ENST00000307641.9|NKIRAS2|ENSG00000168256.18|NFKB inhibitor interacting Ras like 2
hg38_v1_chr10_-_74163_74163	0.143505	GLI3	ENST00000564130.2|TUBB8|ENSG00000261456.6|tubulin beta 8 class VIII
hg38_v1_chr16_-_89201635_89201651	0.143501	GLI3	ENST00000562855.7|SLC22A31|ENSG00000259803.8|solute carrier family 22 member 31
hg38_v1_chrX_+_48683763_48683850	0.14325	GLI3	ENST00000376701.5|WAS|ENSG00000015285.11|WASP actin nucleation promoting factor
hg38_v1_chr16_+_9091593_9091659	0.142875	GLI3	ENST00000327827.12|C16orf72|ENSG00000182831.12|chromosome 16 open reading frame 72
hg38_v1_chr1_+_6624842_6624878	0.142855	GLI3	ENST00000054650.8|THAP3|ENSG00000041988.15|THAP domain containing 3
hg38_v1_chrX_+_30215551_30215586	0.142599	GLI3	ENST00000378988.5|MAGEB2|ENSG00000099399.6|MAGE family member B2
hg38_v1_chr18_+_3448456_3448499	0.142243	GLI3	ENST00000549780.5|TGIF1|ENSG00000177426.22|TGFB induced factor homeobox 1
hg38_v1_chr1_-_11805949_11805972	0.142164	GLI3	ENST00000376590.9|MTHFR|ENSG00000177000.13|methylenetetrahydrofolate reductase
hg38_v1_chr19_-_45423501_45423605	0.141776	GLI3	ENST00000591636.5|ERCC1|ENSG00000012061.16|ERCC excision repair 1, endonuclease non-catalytic subunit	ENST00000013807.9|ERCC1|ENSG00000012061.16|ERCC excision repair 1, endonuclease non-catalytic subunit	ENST00000592023.5|ERCC1|ENSG00000012061.16|ERCC excision repair 1, endonuclease non-catalytic subunit
hg38_v1_chr9_-_113298865_113298865	0.141029	GLI3	ENST00000416588.2|RNF183|ENSG00000165188.14|ring finger protein 183
hg38_v1_chr1_+_2050387_2050450	0.140995	GLI3	ENST00000378567.8|PRKCZ|ENSG00000067606.17|protein kinase C zeta
hg38_v1_chr19_-_48746797_48746909	0.140854	GLI3	ENST00000602105.1|IZUMO1|ENSG00000182264.9|izumo sperm-egg fusion 1	ENST00000332955.7|IZUMO1|ENSG00000182264.9|izumo sperm-egg fusion 1
hg38_v1_chrX_+_41447322_41447434	0.140624	GLI3	ENST00000378220.2|NYX|ENSG00000188937.6|nyctalopin	ENST00000342595.2|NYX|ENSG00000188937.6|nyctalopin
hg38_v1_chr3_+_161221280_161221328	0.140557	GLI3	ENST00000472947.5|NMD3|ENSG00000169251.13|NMD3 ribosome export adaptor	ENST00000351193.7|NMD3|ENSG00000169251.13|NMD3 ribosome export adaptor	ENST00000463518.5|NMD3|ENSG00000169251.13|NMD3 ribosome export adaptor
hg38_v1_chr22_+_20021069_20021121	0.140257	GLI3	ENST00000420290.6|TANGO2|ENSG00000183597.16|transport and golgi organization 2 homolog	ENST00000432883.5|TANGO2|ENSG00000183597.16|transport and golgi organization 2 homolog	ENST00000434570.6|TANGO2|ENSG00000183597.16|transport and golgi organization 2 homolog	ENST00000447208.6|TANGO2|ENSG00000183597.16|transport and golgi organization 2 homolog	ENST00000456048.5|TANGO2|ENSG00000183597.16|transport and golgi organization 2 homolog	ENST00000398042.6|TANGO2|ENSG00000183597.16|transport and golgi organization 2 homolog	ENST00000450664.5|TANGO2|ENSG00000183597.16|transport and golgi organization 2 homolog	ENST00000327374.9|TANGO2|ENSG00000183597.16|transport and golgi organization 2 homolog
hg38_v1_chr16_+_56657999_56658017	0.140228	GLI3	ENST00000568475.1|MT1F|ENSG00000198417.7|metallothionein 1F
hg38_v1_chr10_+_112447198_112447282	0.140172	GLI3	ENST00000393077.3|VTI1A|ENSG00000151532.14|vesicle transport through interaction with t-SNAREs 1A	ENST00000432306.5|VTI1A|ENSG00000151532.14|vesicle transport through interaction with t-SNAREs 1A
hg38_v1_chr5_+_52787899_52787990	0.140138	GLI3	ENST00000274311.3|PELO|ENSG00000152684.11|pelota mRNA surveillance and ribosome rescue factor	ENST00000282588.7|ITGA1|ENSG00000213949.10|integrin subunit alpha 1
hg38_v1_chr2_+_170816868_170816901	0.139871	GLI3	ENST00000358196.8|GAD1|ENSG00000128683.14|glutamate decarboxylase 1
hg38_v1_chr3_-_49029378_49029452	0.139661	GLI3	ENST00000442157.2|IMPDH2|ENSG00000178035.13|inosine monophosphate dehydrogenase 2	ENST00000326739.9|IMPDH2|ENSG00000178035.13|inosine monophosphate dehydrogenase 2	ENST00000677010.1|IMPDH2|ENSG00000178035.13|inosine monophosphate dehydrogenase 2	ENST00000678724.1|IMPDH2|ENSG00000178035.13|inosine monophosphate dehydrogenase 2	ENST00000429182.6|IMPDH2|ENSG00000178035.13|inosine monophosphate dehydrogenase 2
hg38_v1_chr17_+_7281711_7281757	0.138526	GLI3	ENST00000317370.13|SLC2A4|ENSG00000181856.15|solute carrier family 2 member 4	ENST00000571308.5|SLC2A4|ENSG00000181856.15|solute carrier family 2 member 4
hg38_v1_chr13_+_51222334_51222383	0.13838	GLI3	ENST00000615498.4|FAM124A|ENSG00000150510.17|family with sequence similarity 124 member A	ENST00000280057.6|FAM124A|ENSG00000150510.17|family with sequence similarity 124 member A
hg38_v1_chr17_+_35731620_35731705	0.138336	GLI3	ENST00000603017.2|RASL10B|ENSG00000270885.2|RAS like family 10 member B
hg38_v1_chr21_+_46111434_46111477	0.138212	GLI3	ENST00000397763.5|COL6A2|ENSG00000142173.16|collagen type VI alpha 2 chain	ENST00000409416.6|COL6A2|ENSG00000142173.16|collagen type VI alpha 2 chain
hg38_v1_chr17_-_56914032_56914100	0.138126	GLI3	ENST00000537230.3|TRIM25|ENSG00000121060.19|tripartite motif containing 25	ENST00000316881.9|TRIM25|ENSG00000121060.19|tripartite motif containing 25
hg38_v1_chr17_+_82716698_82716787	0.137769	GLI3	ENST00000269373.11|FN3KRP|ENSG00000141560.15|fructosamine 3 kinase related protein	ENST00000577128.1|FN3KRP|ENSG00000141560.15|fructosamine 3 kinase related protein	ENST00000573158.5|FN3KRP|ENSG00000141560.15|fructosamine 3 kinase related protein
hg38_v1_chr19_-_20661563_20661601	0.137754	GLI3	ENST00000601440.6|ZNF626|ENSG00000188171.16|zinc finger protein 626	ENST00000595094.1|ENSG00000269110.1|ENSG00000269110.1|novel transcript	ENST00000291750.6|ZNF626|ENSG00000188171.16|zinc finger protein 626
hg38_v1_chr20_+_59628609_59628658	0.137684	GLI3	ENST00000541461.5|PHACTR3|ENSG00000087495.17|phosphatase and actin regulator 3
hg38_v1_chr6_-_110415539_110415579	0.137683	GLI3	ENST00000368923.8|DDO|ENSG00000203797.12|D-aspartate oxidase	ENST00000368924.9|DDO|ENSG00000203797.12|D-aspartate oxidase
hg38_v1_chr5_+_271616_271630	0.137574	GLI3	ENST00000614778.4|PDCD6|ENSG00000249915.8|programmed cell death 6	ENST00000618970.4|PDCD6|ENSG00000249915.8|programmed cell death 6	ENST00000628729.2|PDCD6|ENSG00000249915.8|programmed cell death 6
hg38_v1_chr1_+_36224410_36224491	0.137237	GLI3	ENST00000469141.6|THRAP3|ENSG00000054118.15|thyroid hormone receptor associated protein 3	ENST00000648638.1|THRAP3|ENSG00000054118.15|thyroid hormone receptor associated protein 3	ENST00000354618.10|THRAP3|ENSG00000054118.15|thyroid hormone receptor associated protein 3
hg38_v1_chr17_+_77453993_77454012	0.136839	GLI3	ENST00000592951.5|SEPTIN9|ENSG00000184640.20|septin 9
hg38_v1_chr17_-_41812586_41812630	0.136644	GLI3	ENST00000355468.7|P3H4|ENSG00000141696.13|prolyl 3-hydroxylase family member 4 (inactive)	ENST00000590496.1|P3H4|ENSG00000141696.13|prolyl 3-hydroxylase family member 4 (inactive)
hg38_v1_chrX_+_72912615_72912615	0.136585	GLI3	ENST00000636532.1|FAM236C|ENSG00000283594.1|family with sequence similarity 236 member C	ENST00000636267.1|FAM236C|ENSG00000283594.1|family with sequence similarity 236 member C
hg38_v1_chr6_+_116280098_116280125	0.136343	GLI3	ENST00000643175.1|DSE|ENSG00000111817.19|dermatan sulfate epimerase	ENST00000452085.7|DSE|ENSG00000111817.19|dermatan sulfate epimerase
hg38_v1_chr3_-_171809770_171809924	0.13634	GLI3	ENST00000331659.2|PLD1|ENSG00000075651.16|phospholipase D1
hg38_v1_chrX_-_9034127_9034127	0.135387	GLI3	ENST00000327220.10|FAM9B|ENSG00000177138.17|family with sequence similarity 9 member B
hg38_v1_chr1_-_109763909_109763931	0.13534	GLI3	ENST00000361965.9|EPS8L3|ENSG00000198758.11|EPS8 like 3	ENST00000361852.8|EPS8L3|ENSG00000198758.11|EPS8 like 3
hg38_v1_chr8_+_89901845_89901859	0.134247	GLI3	ENST00000647849.1|OSGIN2|ENSG00000164823.11|oxidative stress induced growth inhibitor family member 2	ENST00000297438.6|OSGIN2|ENSG00000164823.11|oxidative stress induced growth inhibitor family member 2
hg38_v1_chr19_-_54280498_54280575	0.134071	GLI3	ENST00000391746.5|LILRB2|ENSG00000131042.15|leukocyte immunoglobulin like receptor B2
hg38_v1_chr15_-_41544243_41544277	0.133955	GLI3	ENST00000567866.5|RPAP1|ENSG00000103932.12|RNA polymerase II associated protein 1	ENST00000304330.9|RPAP1|ENSG00000103932.12|RNA polymerase II associated protein 1	ENST00000561603.5|RPAP1|ENSG00000103932.12|RNA polymerase II associated protein 1	ENST00000566863.1|RPAP1|ENSG00000103932.12|RNA polymerase II associated protein 1
hg38_v1_chr11_-_74009077_74009090	0.133876	GLI3	ENST00000314032.9|UCP3|ENSG00000175564.13|uncoupling protein 3	ENST00000426995.2|UCP3|ENSG00000175564.13|uncoupling protein 3
hg38_v1_chr21_-_39183398_39183463	0.133595	GLI3	ENST00000331573.8|PSMG1|ENSG00000183527.12|proteasome assembly chaperone 1
hg38_v1_chr2_-_179861604_179861618	0.133436	GLI3	ENST00000410066.7|ZNF385B|ENSG00000144331.20|zinc finger protein 385B
hg38_v1_chr3_-_125595488_125595579	0.133388	GLI3	ENST00000296220.6|OSBPL11|ENSG00000144909.8|oxysterol binding protein like 11
hg38_v1_chr17_-_15619704_15619704	0.133092	GLI3	ENST00000395906.8|CDRT1|ENSG00000241322.11|CMT1A duplicated region transcript 1
hg38_v1_chr12_-_6493240_6493274	0.133088	GLI3	ENST00000229238.5|MRPL51|ENSG00000111639.8|mitochondrial ribosomal protein L51
hg38_v1_chr7_-_151520080_151520120	0.133039	GLI3	ENST00000496004.5|RHEB|ENSG00000106615.10|Ras homolog, mTORC1 binding
hg38_v1_chr19_-_35134861_35134872	0.132804	GLI3	ENST00000591633.2|LGI4|ENSG00000153902.14|leucine rich repeat LGI family member 4
hg38_v1_chr11_+_62728069_62728145	0.132696	GLI3	ENST00000530625.5|TTC9C|ENSG00000162222.14|tetratricopeptide repeat domain 9C
hg38_v1_chr20_+_841238_841295	0.132577	GLI3	ENST00000541082.2|FAM110A|ENSG00000125898.13|family with sequence similarity 110 member A
hg38_v1_chr11_+_35943981_35944108	0.132535	GLI3	ENST00000528989.5|LDLRAD3|ENSG00000179241.13|low density lipoprotein receptor class A domain containing 3	ENST00000524419.5|LDLRAD3|ENSG00000179241.13|low density lipoprotein receptor class A domain containing 3	ENST00000315571.6|LDLRAD3|ENSG00000179241.13|low density lipoprotein receptor class A domain containing 3
hg38_v1_chrX_+_71144818_71144871	0.132527	GLI3	ENST00000536169.5|NLGN3|ENSG00000196338.14|neuroligin 3	ENST00000358741.4|NLGN3|ENSG00000196338.14|neuroligin 3	ENST00000395855.6|NLGN3|ENSG00000196338.14|neuroligin 3	ENST00000374051.7|NLGN3|ENSG00000196338.14|neuroligin 3
hg38_v1_chr22_+_22375984_22375989	0.132484	GLI3	ENST00000390296.2|IGLV5-45|ENSG00000211650.2|immunoglobulin lambda variable 5-45
hg38_v1_chrX_-_48411910_48411960	0.132395	GLI3	ENST00000619890.1|SSX4B|ENSG00000269791.6|SSX family member 4B	ENST00000595235.6|SSX4B|ENSG00000269791.6|SSX family member 4B
hg38_v1_chr14_-_50830479_50830610	0.13238	GLI3	ENST00000382043.8|NIN|ENSG00000100503.26|ninein
hg38_v1_chr19_-_474880_474983	0.132137	GLI3	ENST00000382696.7|ODF3L2|ENSG00000181781.10|outer dense fiber of sperm tails 3 like 2	ENST00000315489.5|ODF3L2|ENSG00000181781.10|outer dense fiber of sperm tails 3 like 2
hg38_v1_chr14_-_102509798_102509823	0.132059	GLI3	ENST00000560748.5|ANKRD9|ENSG00000156381.9|ankyrin repeat domain 9
hg38_v1_chr2_-_74552616_74552695	0.131831	GLI3	ENST00000409249.5|LOXL3|ENSG00000115318.12|lysyl oxidase like 3
hg38_v1_chr19_-_5286163_5286388	0.131381	GLI3	ENST00000592099.5|PTPRS|ENSG00000105426.17|protein tyrosine phosphatase receptor type S	ENST00000588012.5|PTPRS|ENSG00000105426.17|protein tyrosine phosphatase receptor type S	ENST00000262963.10|PTPRS|ENSG00000105426.17|protein tyrosine phosphatase receptor type S	ENST00000587303.5|PTPRS|ENSG00000105426.17|protein tyrosine phosphatase receptor type S	ENST00000590509.5|PTPRS|ENSG00000105426.17|protein tyrosine phosphatase receptor type S
hg38_v1_chr7_+_130492066_130492113	0.131198	GLI3	ENST00000223215.10|MEST|ENSG00000106484.16|mesoderm specific transcript	ENST00000437945.6|MEST|ENSG00000106484.16|mesoderm specific transcript
hg38_v1_chr5_+_141338753_141338775	0.131145	GLI3	ENST00000528330.2|PCDHGA2|ENSG00000081853.15|protocadherin gamma subfamily A, 2	ENST00000394576.3|PCDHGA2|ENSG00000081853.15|protocadherin gamma subfamily A, 2
hg38_v1_chr4_-_973532_973590	0.131096	GLI3	ENST00000273814.8|DGKQ|ENSG00000145214.14|diacylglycerol kinase theta
hg38_v1_chr11_-_69013233_69013268	0.131038	GLI3	ENST00000309099.7|MRGPRF|ENSG00000172935.9|MAS related GPR family member F	ENST00000320913.6|MRGPRF|ENSG00000172935.9|MAS related GPR family member F
hg38_v1_chr20_+_43514492_43514534	0.130115	GLI3	ENST00000373135.8|L3MBTL1|ENSG00000185513.17|L3MBTL histone methyl-lysine binding protein 1	ENST00000373134.5|L3MBTL1|ENSG00000185513.17|L3MBTL histone methyl-lysine binding protein 1
hg38_v1_chr10_+_74151232_74151240	0.130064	GLI3	ENST00000478611.2|ADK|ENSG00000156110.15|adenosine kinase	ENST00000673352.1|ADK|ENSG00000156110.15|adenosine kinase
hg38_v1_chr14_-_24634160_24634209	0.129504	GLI3	ENST00000616551.1|GZMB|ENSG00000100453.13|granzyme B	ENST00000382542.5|GZMB|ENSG00000100453.13|granzyme B	ENST00000216341.9|GZMB|ENSG00000100453.13|granzyme B	ENST00000526004.1|GZMB|ENSG00000100453.13|granzyme B	ENST00000415355.7|GZMB|ENSG00000100453.13|granzyme B
hg38_v1_chr21_-_45542414_45542456	0.129114	GLI3	ENST00000311124.9|SLC19A1|ENSG00000173638.19|solute carrier family 19 member 1
hg38_v1_chrX_-_149631682_149631756	0.129102	GLI3	ENST00000511776.1|TMEM185A|ENSG00000269556.8|transmembrane protein 185A	ENST00000507237.5|TMEM185A|ENSG00000269556.8|transmembrane protein 185A
hg38_v1_chr14_+_104579757_104579774	0.128942	GLI3	ENST00000331952.6|C14orf180|ENSG00000184601.11|chromosome 14 open reading frame 180	ENST00000557649.6|C14orf180|ENSG00000184601.11|chromosome 14 open reading frame 180
hg38_v1_chr11_-_2171805_2171823	0.128624	GLI3	ENST00000381178.5|TH|ENSG00000180176.15|tyrosine hydroxylase	ENST00000381175.5|TH|ENSG00000180176.15|tyrosine hydroxylase	ENST00000333684.9|TH|ENSG00000180176.15|tyrosine hydroxylase	ENST00000352909.8|TH|ENSG00000180176.15|tyrosine hydroxylase
hg38_v1_chrX_+_72776873_72776901	0.128449	GLI3	ENST00000334036.10|DMRTC1B|ENSG00000184911.15|DMRT like family C1B
hg38_v1_chr7_-_44141074_44141088	0.128243	GLI3	ENST00000457314.5|MYL7|ENSG00000106631.8|myosin light chain 7	ENST00000447951.1|MYL7|ENSG00000106631.8|myosin light chain 7	ENST00000431007.1|MYL7|ENSG00000106631.8|myosin light chain 7
hg38_v1_chr16_+_2988256_2988263	0.128168	GLI3	ENST00000573315.2|LINC00514|ENSG00000262152.7|long intergenic non-protein coding RNA 514
hg38_v1_chr11_-_65872728_65872810	0.128101	GLI3	ENST00000528176.5|EFEMP2|ENSG00000172638.13|EGF containing fibulin extracellular matrix protein 2	ENST00000307998.11|EFEMP2|ENSG00000172638.13|EGF containing fibulin extracellular matrix protein 2
hg38_v1_chrX_-_149631787_149631912	0.12802	GLI3	ENST00000600449.8|TMEM185A|ENSG00000269556.8|transmembrane protein 185A	ENST00000611119.4|TMEM185A|ENSG00000269556.8|transmembrane protein 185A
hg38_v1_chr6_-_17987463_17987682	0.127396	GLI3	ENST00000378814.9|KIF13A|ENSG00000137177.20|kinesin family member 13A	ENST00000636847.1|KIF13A|ENSG00000137177.20|kinesin family member 13A	ENST00000378843.6|KIF13A|ENSG00000137177.20|kinesin family member 13A	ENST00000378826.6|KIF13A|ENSG00000137177.20|kinesin family member 13A	ENST00000502704.2|KIF13A|ENSG00000137177.20|kinesin family member 13A	ENST00000259711.11|KIF13A|ENSG00000137177.20|kinesin family member 13A
hg38_v1_chr15_-_70763430_70763452	0.127282	GLI3	ENST00000539319.5|UACA|ENSG00000137831.15|uveal autoantigen with coiled-coil domains and ankyrin repeats
hg38_v1_chr1_-_156572535_156572573	0.126952	GLI3	ENST00000361170.7|IQGAP3|ENSG00000183856.11|IQ motif containing GTPase activating protein 3
hg38_v1_chr12_+_51888083_51888119	0.126654	GLI3	ENST00000301190.11|ANKRD33|ENSG00000167612.13|ankyrin repeat domain 33
hg38_v1_chr12_-_57547121_57547219	0.125529	GLI3	ENST00000550954.5|DCTN2|ENSG00000175203.17|dynactin subunit 2	ENST00000434715.7|DCTN2|ENSG00000175203.17|dynactin subunit 2	ENST00000678505.1|DCTN2|ENSG00000175203.17|dynactin subunit 2	ENST00000543672.6|DCTN2|ENSG00000175203.17|dynactin subunit 2	ENST00000546670.5|DCTN2|ENSG00000175203.17|dynactin subunit 2	ENST00000548249.6|DCTN2|ENSG00000175203.17|dynactin subunit 2
hg38_v1_chr1_+_233327710_233327747	0.125222	GLI3	ENST00000366624.8|MAP3K21|ENSG00000143674.11|mitogen-activated protein kinase kinase kinase 21
hg38_v1_chr2_+_241558716_241558766	0.125106	GLI3	ENST00000318407.5|BOK|ENSG00000176720.6|BCL2 family apoptosis regulator BOK
hg38_v1_chr19_-_1848452_1848489	0.124974	GLI3	ENST00000170168.9|REXO1|ENSG00000079313.15|RNA exonuclease 1 homolog
hg38_v1_chr17_-_7114240_7114309	0.124924	GLI3	ENST00000446679.6|ASGR2|ENSG00000161944.16|asialoglycoprotein receptor 2
hg38_v1_chr3_-_185499022_185499042	0.124509	GLI3	ENST00000421852.6|TMEM41A|ENSG00000163900.11|transmembrane protein 41A
hg38_v1_chr1_+_32205657_32205680	0.124491	GLI3	ENST00000291358.11|IQCC|ENSG00000160051.12|IQ motif containing C	ENST00000537469.2|IQCC|ENSG00000160051.12|IQ motif containing C
hg38_v1_chr19_-_58558871_58558992	0.124477	GLI3	ENST00000595957.5|UBE2M|ENSG00000130725.8|ubiquitin conjugating enzyme E2 M
hg38_v1_chr12_-_108731505_108731541	0.124467	GLI3	ENST00000261401.8|CORO1C|ENSG00000110880.11|coronin 1C	ENST00000552871.5|CORO1C|ENSG00000110880.11|coronin 1C
hg38_v1_chrX_+_46837034_46837050	0.124351	GLI3	ENST00000218340.4|RP2|ENSG00000102218.6|RP2 activator of ARL3 GTPase
hg38_v1_chr19_+_9247344_9247344	0.124257	GLI3	ENST00000641946.1|OR7E24|ENSG00000237521.4|olfactory receptor family 7 subfamily E member 24
hg38_v1_chr3_-_50611767_50611781	0.124037	GLI3	ENST00000443053.6|CISH|ENSG00000114737.16|cytokine inducible SH2 containing protein	ENST00000348721.4|CISH|ENSG00000114737.16|cytokine inducible SH2 containing protein
hg38_v1_chr19_+_35533436_35533462	0.123964	GLI3	ENST00000222286.9|GAPDHS|ENSG00000105679.9|glyceraldehyde-3-phosphate dehydrogenase, spermatogenic
hg38_v1_chr1_-_156500723_156500753	0.123873	GLI3	ENST00000368240.6|MEF2D|ENSG00000116604.18|myocyte enhancer factor 2D
hg38_v1_chr2_+_219514477_219514509	0.12377	GLI3	ENST00000347842.8|ASIC4|ENSG00000072182.13|acid sensing ion channel subunit family member 4	ENST00000358078.5|ASIC4|ENSG00000072182.13|acid sensing ion channel subunit family member 4
hg38_v1_chr12_-_10454485_10454685	0.123686	GLI3	ENST00000408006.7|KLRC1|ENSG00000134545.14|killer cell lectin like receptor C1	ENST00000544822.2|KLRC1|ENSG00000134545.14|killer cell lectin like receptor C1	ENST00000536188.5|KLRC1|ENSG00000134545.14|killer cell lectin like receptor C1
hg38_v1_chr15_-_75712828_75712856	0.12354	GLI3	ENST00000308508.5|CSPG4|ENSG00000173546.7|chondroitin sulfate proteoglycan 4
hg38_v1_chr16_+_29900345_29900408	0.123418	GLI3	ENST00000563177.5|ASPHD1|ENSG00000174939.11|aspartate beta-hydroxylase domain containing 1	ENST00000483405.5|ASPHD1|ENSG00000174939.11|aspartate beta-hydroxylase domain containing 1
hg38_v1_chr1_+_247507058_247507126	0.12336	GLI3	ENST00000527084.5|GCSAML|ENSG00000169224.13|germinal center associated signaling and motility like	ENST00000536561.5|GCSAML|ENSG00000169224.13|germinal center associated signaling and motility like	ENST00000527541.5|GCSAML|ENSG00000169224.13|germinal center associated signaling and motility like	ENST00000366491.6|GCSAML|ENSG00000169224.13|germinal center associated signaling and motility like	ENST00000366489.5|GCSAML|ENSG00000169224.13|germinal center associated signaling and motility like	ENST00000526896.5|GCSAML|ENSG00000169224.13|germinal center associated signaling and motility like
hg38_v1_chr8_-_3409528_3409607	0.122537	GLI3	ENST00000335551.11|CSMD1|ENSG00000183117.19|CUB and Sushi multiple domains 1
hg38_v1_chr5_+_218241_218357	0.122439	GLI3	ENST00000617470.4|SDHA|ENSG00000073578.17|succinate dehydrogenase complex flavoprotein subunit A	ENST00000504309.5|SDHA|ENSG00000073578.17|succinate dehydrogenase complex flavoprotein subunit A	ENST00000510361.5|SDHA|ENSG00000073578.17|succinate dehydrogenase complex flavoprotein subunit A	ENST00000264932.11|SDHA|ENSG00000073578.17|succinate dehydrogenase complex flavoprotein subunit A
hg38_v1_chr17_-_3592877_3592877	0.122356	GLI3	ENST00000399756.8|TRPV1|ENSG00000196689.13|transient receptor potential cation channel subfamily V member 1
hg38_v1_chr17_+_75633420_75633452	0.122255	GLI3	ENST00000375215.3|SMIM5|ENSG00000204323.5|small integral membrane protein 5
hg38_v1_chr22_+_24607638_24607655	0.121702	GLI3	ENST00000432867.5|GGT1|ENSG00000100031.19|gamma-glutamyltransferase 1
hg38_v1_chr17_+_28662183_28662230	0.12164	GLI3	ENST00000347486.8|SUPT6H|ENSG00000109111.15|SPT6 homolog, histone chaperone and transcription elongation factor	ENST00000314616.11|SUPT6H|ENSG00000109111.15|SPT6 homolog, histone chaperone and transcription elongation factor
hg38_v1_chr5_-_139462701_139462751	0.121511	GLI3	ENST00000618155.3|ECSCR|ENSG00000249751.4|endothelial cell surface expressed chemotaxis and apoptosis regulator
hg38_v1_chr19_+_18340581_18340617	0.121481	GLI3	ENST00000604499.6|PGPEP1|ENSG00000130517.14|pyroglutamyl-peptidase I	ENST00000269919.11|PGPEP1|ENSG00000130517.14|pyroglutamyl-peptidase I	ENST00000595066.5|PGPEP1|ENSG00000130517.14|pyroglutamyl-peptidase I	ENST00000252813.5|PGPEP1|ENSG00000130517.14|pyroglutamyl-peptidase I
hg38_v1_chr1_-_2412509_2412579	0.121479	GLI3	ENST00000507596.5|PEX10|ENSG00000157911.11|peroxisomal biogenesis factor 10	ENST00000288774.8|PEX10|ENSG00000157911.11|peroxisomal biogenesis factor 10	ENST00000447513.7|PEX10|ENSG00000157911.11|peroxisomal biogenesis factor 10
hg38_v1_chr12_-_57488726_57488838	0.121385	GLI3	ENST00000550288.6|ARHGAP9|ENSG00000123329.20|Rho GTPase activating protein 9	ENST00000393797.7|ARHGAP9|ENSG00000123329.20|Rho GTPase activating protein 9
hg38_v1_chr12_-_26833143_26833214	0.121085	GLI3	ENST00000381340.8|ITPR2|ENSG00000123104.12|inositol 1,4,5-trisphosphate receptor type 2
hg38_v1_chr21_-_44262216_44262380	0.120667	GLI3	ENST00000270172.7|DNMT3L|ENSG00000142182.9|DNA methyltransferase 3 like
hg38_v1_chr10_+_119104075_119104119	0.120471	GLI3	ENST00000472379.2|DENND10|ENSG00000119979.18|DENN domain containing 10	ENST00000361432.3|DENND10|ENSG00000119979.18|DENN domain containing 10	ENST00000648560.1|DENND10|ENSG00000119979.18|DENN domain containing 10
hg38_v1_chr20_+_64084995_64085016	0.120211	GLI3	ENST00000349451.3|OPRL1|ENSG00000125510.18|opioid related nociceptin receptor 1
hg38_v1_chr16_+_85027735_85027754	0.119905	GLI3	ENST00000258180.7|KIAA0513|ENSG00000135709.13|KIAA0513	ENST00000538274.5|KIAA0513|ENSG00000135709.13|KIAA0513
hg38_v1_chr3_-_185821092_185821147	0.119508	GLI3	ENST00000421047.3|IGF2BP2|ENSG00000073792.16|insulin like growth factor 2 mRNA binding protein 2
hg38_v1_chr1_-_109763940_109764027	0.119162	GLI3	ENST00000369805.7|EPS8L3|ENSG00000198758.11|EPS8 like 3
hg38_v1_chr2_+_200306048_200306159	0.118814	GLI3	ENST00000409988.7|SPATS2L|ENSG00000196141.14|spermatogenesis associated serine rich 2 like	ENST00000409385.5|SPATS2L|ENSG00000196141.14|spermatogenesis associated serine rich 2 like
hg38_v1_chr6_+_31706866_31706904	0.118271	GLI3	ENST00000375832.5|LY6G6F|ENSG00000204424.10|lymphocyte antigen 6 family member G6F	ENST00000503322.1|LY6G6F-LY6G6D|ENSG00000250641.1|LY6G6F-LY6G6D readthrough
hg38_v1_chr6_+_36027796_36027824	0.118148	GLI3	ENST00000229794.9|MAPK14|ENSG00000112062.11|mitogen-activated protein kinase 14
hg38_v1_chr9_-_98708856_98708975	0.117907	GLI3	ENST00000259455.4|GABBR2|ENSG00000136928.7|gamma-aminobutyric acid type B receptor subunit 2
hg38_v1_chr1_-_39883434_39883512	0.117722	GLI3	ENST00000541099.5|TRIT1|ENSG00000043514.17|tRNA isopentenyltransferase 1	ENST00000441669.6|TRIT1|ENSG00000043514.17|tRNA isopentenyltransferase 1	ENST00000316891.10|TRIT1|ENSG00000043514.17|tRNA isopentenyltransferase 1	ENST00000537440.5|TRIT1|ENSG00000043514.17|tRNA isopentenyltransferase 1	ENST00000372818.5|TRIT1|ENSG00000043514.17|tRNA isopentenyltransferase 1
hg38_v1_chr9_-_133336169_133336217	0.117351	GLI3	ENST00000372022.6|SURF6|ENSG00000148296.7|surfeit 6
hg38_v1_chr16_+_30023198_30023401	0.117289	GLI3	ENST00000681219.1|C16orf92|ENSG00000167194.8|chromosome 16 open reading frame 92	ENST00000300575.6|C16orf92|ENSG00000167194.8|chromosome 16 open reading frame 92
hg38_v1_chr3_+_141763408_141763408	0.117242	GLI3	ENST00000682958.1|GRK7|ENSG00000114124.3|G protein-coupled receptor kinase 7
hg38_v1_chr7_-_151187772_151187832	0.116962	GLI3	ENST00000377867.7|ASB10|ENSG00000146926.11|ankyrin repeat and SOCS box containing 10
hg38_v1_chr19_+_1275997_1276037	0.116569	GLI3	ENST00000469144.5|FAM174C|ENSG00000228300.14|family with sequence similarity 174 member C
hg38_v1_chr8_+_119416427_119416456	0.116423	GLI3	ENST00000259526.4|CCN3|ENSG00000136999.5|cellular communication network factor 3
hg38_v1_chr19_-_43269437_43269540	0.116379	GLI3	ENST00000291752.9|PSG9|ENSG00000183668.18|pregnancy specific beta-1-glycoprotein 9	ENST00000244293.11|PSG9|ENSG00000183668.18|pregnancy specific beta-1-glycoprotein 9	ENST00000596730.1|PSG9|ENSG00000183668.18|pregnancy specific beta-1-glycoprotein 9	ENST00000621109.4|PSG9|ENSG00000183668.18|pregnancy specific beta-1-glycoprotein 9	ENST00000593948.5|PSG9|ENSG00000183668.18|pregnancy specific beta-1-glycoprotein 9	ENST00000443718.7|PSG9|ENSG00000183668.18|pregnancy specific beta-1-glycoprotein 9	ENST00000418820.6|PSG9|ENSG00000183668.18|pregnancy specific beta-1-glycoprotein 9	ENST00000270077.8|PSG9|ENSG00000183668.18|pregnancy specific beta-1-glycoprotein 9
hg38_v1_chr17_-_50373173_50373207	0.115703	GLI3	ENST00000225969.9|MRPL27|ENSG00000108826.16|mitochondrial ribosomal protein L27	ENST00000503633.5|MRPL27|ENSG00000108826.16|mitochondrial ribosomal protein L27	ENST00000442592.3|MRPL27|ENSG00000108826.16|mitochondrial ribosomal protein L27
hg38_v1_chr17_+_82031643_82031695	0.11566	GLI3	ENST00000306897.9|RAC3|ENSG00000169750.9|Rac family small GTPase 3
hg38_v1_chr5_-_132777371_132777390	0.115431	GLI3	ENST00000620483.4|SEPTIN8|ENSG00000164402.14|septin 8
hg38_v1_chr14_-_106791226_106791234	0.115428	GLI3	ENST00000433072.2|IGHV3-72|ENSG00000225698.4|immunoglobulin heavy variable 3-72
hg38_v1_chr17_-_75855204_75855420	0.115286	GLI3	ENST00000589642.5|WBP2|ENSG00000132471.12|WW domain binding protein 2	ENST00000593002.1|WBP2|ENSG00000132471.12|WW domain binding protein 2	ENST00000590221.5|WBP2|ENSG00000132471.12|WW domain binding protein 2	ENST00000587374.5|WBP2|ENSG00000132471.12|WW domain binding protein 2	ENST00000585462.5|WBP2|ENSG00000132471.12|WW domain binding protein 2	ENST00000254806.8|WBP2|ENSG00000132471.12|WW domain binding protein 2	ENST00000433525.6|WBP2|ENSG00000132471.12|WW domain binding protein 2	ENST00000626827.2|WBP2|ENSG00000132471.12|WW domain binding protein 2
hg38_v1_chr6_+_42915989_42916002	0.115285	GLI3	ENST00000441198.4|PTCRA|ENSG00000171611.10|pre T cell antigen receptor alpha	ENST00000446507.5|PTCRA|ENSG00000171611.10|pre T cell antigen receptor alpha	ENST00000616441.2|PTCRA|ENSG00000171611.10|pre T cell antigen receptor alpha
hg38_v1_chr21_-_46228751_46228824	0.114625	GLI3	ENST00000450351.1|LSS|ENSG00000160285.15|lanosterol synthase	ENST00000397728.8|LSS|ENSG00000160285.15|lanosterol synthase	ENST00000522411.5|LSS|ENSG00000160285.15|lanosterol synthase	ENST00000356396.8|LSS|ENSG00000160285.15|lanosterol synthase	ENST00000457828.6|LSS|ENSG00000160285.15|lanosterol synthase
hg38_v1_chr12_+_72272360_72272406	0.114491	GLI3	ENST00000547300.2|TRHDE|ENSG00000072657.10|thyrotropin releasing hormone degrading enzyme	ENST00000261180.10|TRHDE|ENSG00000072657.10|thyrotropin releasing hormone degrading enzyme
hg38_v1_chr1_-_153613095_153613153	0.114309	GLI3	ENST00000368706.9|S100A16|ENSG00000188643.11|S100 calcium binding protein A16
hg38_v1_chr15_+_42575592_42575613	0.114184	GLI3	ENST00000290607.12|STARD9|ENSG00000159433.12|StAR related lipid transfer domain containing 9
hg38_v1_chr7_-_6447920_6447976	0.113293	GLI3	ENST00000425398.6|DAGLB|ENSG00000164535.15|diacylglycerol lipase beta	ENST00000432248.1|DAGLB|ENSG00000164535.15|diacylglycerol lipase beta	ENST00000297056.11|DAGLB|ENSG00000164535.15|diacylglycerol lipase beta
hg38_v1_chr1_+_150982268_150982329	0.113274	GLI3	ENST00000368947.9|ANXA9|ENSG00000143412.10|annexin A9
hg38_v1_chr10_+_988425_988471	0.112439	GLI3	ENST00000360803.9|GTPBP4|ENSG00000107937.19|GTP binding protein 4
hg38_v1_chr5_-_142698004_142698070	0.112142	GLI3	ENST00000407758.5|FGF1|ENSG00000113578.18|fibroblast growth factor 1	ENST00000441680.6|FGF1|ENSG00000113578.18|fibroblast growth factor 1	ENST00000419524.6|FGF1|ENSG00000113578.18|fibroblast growth factor 1	ENST00000621536.4|FGF1|ENSG00000113578.18|fibroblast growth factor 1
hg38_v1_chr1_+_200739542_200739616	0.111784	GLI3	ENST00000358823.6|CAMSAP2|ENSG00000118200.14|calmodulin regulated spectrin associated protein family member 2
hg38_v1_chr11_-_65857543_65857697	0.111607	GLI3	ENST00000534784.1|CFL1|ENSG00000172757.13|cofilin 1
hg38_v1_chr15_+_73994777_73994803	0.11115	GLI3	ENST00000563500.5|PML|ENSG00000140464.20|PML nuclear body scaffold
hg38_v1_chr12_-_8066331_8066383	0.110811	GLI3	ENST00000546241.1|C3AR1|ENSG00000171860.5|complement C3a receptor 1	ENST00000307637.5|C3AR1|ENSG00000171860.5|complement C3a receptor 1
hg38_v1_chr12_-_6493718_6493856	0.110774	GLI3	ENST00000543959.5|MRPL51|ENSG00000111639.8|mitochondrial ribosomal protein L51	ENST00000543164.5|MRPL51|ENSG00000111639.8|mitochondrial ribosomal protein L51	ENST00000543703.1|MRPL51|ENSG00000111639.8|mitochondrial ribosomal protein L51	ENST00000537701.5|MRPL51|ENSG00000111639.8|mitochondrial ribosomal protein L51
hg38_v1_chr2_-_73642413_73642434	0.110415	GLI3	ENST00000272425.4|NAT8|ENSG00000144035.4|N-acetyltransferase 8 (putative)
hg38_v1_chr9_-_133149334_133149440	0.109723	GLI3	ENST00000393160.7|RALGDS|ENSG00000160271.16|ral guanine nucleotide dissociation stimulator
hg38_v1_chr11_-_35419542_35419565	0.109587	GLI3	ENST00000643305.1|SLC1A2|ENSG00000110436.13|solute carrier family 1 member 2	ENST00000644351.1|SLC1A2|ENSG00000110436.13|solute carrier family 1 member 2	ENST00000278379.9|SLC1A2|ENSG00000110436.13|solute carrier family 1 member 2	ENST00000644779.1|SLC1A2|ENSG00000110436.13|solute carrier family 1 member 2
hg38_v1_chr20_+_46008900_46008914	0.109527	GLI3	ENST00000372330.3|MMP9|ENSG00000100985.7|matrix metallopeptidase 9
hg38_v1_chr17_-_1516621_1516645	0.109057	GLI3	ENST00000574561.1|INPP5K|ENSG00000132376.20|inositol polyphosphate-5-phosphatase K
hg38_v1_chr19_-_3786408_3786415	0.109054	GLI3	ENST00000395040.6|MATK|ENSG00000007264.15|megakaryocyte-associated tyrosine kinase
hg38_v1_chr17_+_16690223_16690325	0.108938	GLI3	ENST00000340621.9|CCDC144A|ENSG00000170160.17|coiled-coil domain containing 144A	ENST00000399273.5|CCDC144A|ENSG00000170160.17|coiled-coil domain containing 144A	ENST00000456009.4|CCDC144A|ENSG00000170160.17|coiled-coil domain containing 144A	ENST00000360524.12|CCDC144A|ENSG00000170160.17|coiled-coil domain containing 144A
hg38_v1_chrX_+_44873169_44873204	0.108593	GLI3	ENST00000675577.1|KDM6A|ENSG00000147050.17|lysine demethylase 6A	ENST00000674867.1|KDM6A|ENSG00000147050.17|lysine demethylase 6A	ENST00000674586.1|KDM6A|ENSG00000147050.17|lysine demethylase 6A	ENST00000382899.9|KDM6A|ENSG00000147050.17|lysine demethylase 6A	ENST00000536777.6|KDM6A|ENSG00000147050.17|lysine demethylase 6A	ENST00000543216.6|KDM6A|ENSG00000147050.17|lysine demethylase 6A	ENST00000377967.9|KDM6A|ENSG00000147050.17|lysine demethylase 6A	ENST00000611820.5|KDM6A|ENSG00000147050.17|lysine demethylase 6A
hg38_v1_chr1_-_46941464_46941483	0.108578	GLI3	ENST00000462347.5|CYP4A11|ENSG00000187048.13|cytochrome P450 family 4 subfamily A member 11	ENST00000371905.1|CYP4A11|ENSG00000187048.13|cytochrome P450 family 4 subfamily A member 11	ENST00000310638.9|CYP4A11|ENSG00000187048.13|cytochrome P450 family 4 subfamily A member 11
hg38_v1_chr22_+_17563485_17563503	0.108513	GLI3	ENST00000327451.11|SLC25A18|ENSG00000182902.14|solute carrier family 25 member 18
hg38_v1_chr19_-_39833615_39833653	0.108449	GLI3	ENST00000593685.5|DYRK1B|ENSG00000105204.14|dual specificity tyrosine phosphorylation regulated kinase 1B	ENST00000600611.5|DYRK1B|ENSG00000105204.14|dual specificity tyrosine phosphorylation regulated kinase 1B
hg38_v1_chr16_+_31033513_31033611	0.10829	GLI3	ENST00000313843.8|STX4|ENSG00000103496.15|syntaxin 4
hg38_v1_chr1_+_207496268_207496341	0.108028	GLI3	ENST00000529814.1|CR1|ENSG00000203710.12|complement C3b/C4b receptor 1 (Knops blood group)
hg38_v1_chr7_-_100827504_100827531	0.107948	GLI3	ENST00000616502.4|EPHB4|ENSG00000196411.10|EPH receptor B4	ENST00000358173.8|EPHB4|ENSG00000196411.10|EPH receptor B4
hg38_v1_chr14_+_22875136_22875179	0.107873	GLI3	ENST00000551466.1|LRP10|ENSG00000197324.9|LDL receptor related protein 10
hg38_v1_chrX_+_154398367_154398413	0.10782	GLI3	ENST00000436473.5|RPL10|ENSG00000147403.18|ribosomal protein L10	ENST00000344746.8|RPL10|ENSG00000147403.18|ribosomal protein L10	ENST00000369817.7|RPL10|ENSG00000147403.18|ribosomal protein L10	ENST00000458500.5|RPL10|ENSG00000147403.18|ribosomal protein L10
hg38_v1_chr19_-_12513833_12513866	0.107423	GLI3	ENST00000455490.1|ZNF709|ENSG00000242852.7|zinc finger protein 709
hg38_v1_chr11_-_61917490_61917602	0.107254	GLI3	ENST00000394836.7|RAB3IL1|ENSG00000167994.13|RAB3A interacting protein like 1
hg38_v1_chr14_-_100568070_100568150	0.107091	GLI3	ENST00000557378.6|BEGAIN|ENSG00000183092.17|brain enriched guanylate kinase associated	ENST00000443071.6|BEGAIN|ENSG00000183092.17|brain enriched guanylate kinase associated	ENST00000637646.1|BEGAIN|ENSG00000183092.17|brain enriched guanylate kinase associated
hg38_v1_chr12_-_95996302_95996365	0.106899	GLI3	ENST00000261208.8|HAL|ENSG00000084110.11|histidine ammonia-lyase	ENST00000538703.5|HAL|ENSG00000084110.11|histidine ammonia-lyase	ENST00000541929.5|HAL|ENSG00000084110.11|histidine ammonia-lyase
hg38_v1_chr8_-_141000937_141001028	0.10687	GLI3	ENST00000520892.5|PTK2|ENSG00000169398.19|protein tyrosine kinase 2
hg38_v1_chrX_+_7843088_7843172	0.106652	GLI3	ENST00000341408.5|VCX|ENSG00000182583.12|variable charge X-linked
hg38_v1_chr10_-_73433550_73433567	0.106546	GLI3	ENST00000299432.7|MSS51|ENSG00000166343.10|MSS51 mitochondrial translational activator
hg38_v1_chr5_-_132777229_132777268	0.106021	GLI3	ENST00000378721.8|SEPTIN8|ENSG00000164402.14|septin 8	ENST00000378719.7|SEPTIN8|ENSG00000164402.14|septin 8	ENST00000378701.5|SEPTIN8|ENSG00000164402.14|septin 8
hg38_v1_chr5_+_6633421_6633465	0.105819	GLI3	ENST00000274192.7|SRD5A1|ENSG00000145545.12|steroid 5 alpha-reductase 1
hg38_v1_chr16_-_67806513_67806652	0.105304	GLI3	ENST00000317506.8|RANBP10|ENSG00000141084.11|RAN binding protein 10	ENST00000448631.6|RANBP10|ENSG00000141084.11|RAN binding protein 10	ENST00000602677.5|RANBP10|ENSG00000141084.11|RAN binding protein 10	ENST00000630626.2|RANBP10|ENSG00000141084.11|RAN binding protein 10
hg38_v1_chr11_-_65047861_65047937	0.105238	GLI3	ENST00000533842.5|NAALADL1|ENSG00000168060.16|N-acetylated alpha-linked acidic dipeptidase like 1	ENST00000532802.5|NAALADL1|ENSG00000168060.16|N-acetylated alpha-linked acidic dipeptidase like 1	ENST00000530139.2|NAALADL1|ENSG00000168060.16|N-acetylated alpha-linked acidic dipeptidase like 1	ENST00000526516.5|NAALADL1|ENSG00000168060.16|N-acetylated alpha-linked acidic dipeptidase like 1
hg38_v1_chr20_+_45791930_45791977	0.104493	GLI3	ENST00000372622.8|DNTTIP1|ENSG00000101457.13|deoxynucleotidyltransferase terminal interacting protein 1
hg38_v1_chr1_+_86704564_86704632	0.104456	GLI3	ENST00000616170.4|SH3GLB1|ENSG00000097033.14|SH3 domain containing GRB2 like, endophilin B1	ENST00000535010.5|SH3GLB1|ENSG00000097033.14|SH3 domain containing GRB2 like, endophilin B1	ENST00000370558.8|SH3GLB1|ENSG00000097033.14|SH3 domain containing GRB2 like, endophilin B1
hg38_v1_chr1_+_231241195_231241230	0.10407	GLI3	ENST00000436239.5|GNPAT|ENSG00000116906.13|glyceronephosphate O-acyltransferase	ENST00000366647.9|GNPAT|ENSG00000116906.13|glyceronephosphate O-acyltransferase	ENST00000416000.1|GNPAT|ENSG00000116906.13|glyceronephosphate O-acyltransferase
hg38_v1_chr20_+_62796432_62796511	0.103177	GLI3	ENST00000370487.5|MRGBP|ENSG00000101189.7|MRG domain binding protein
hg38_v1_chr20_+_45306834_45306851	0.102953	GLI3	ENST00000343694.8|RBPJL|ENSG00000124232.11|recombination signal binding protein for immunoglobulin kappa J region like	ENST00000372741.7|RBPJL|ENSG00000124232.11|recombination signal binding protein for immunoglobulin kappa J region like	ENST00000372743.5|RBPJL|ENSG00000124232.11|recombination signal binding protein for immunoglobulin kappa J region like
hg38_v1_chr5_-_112419251_112419297	0.102798	GLI3	ENST00000261486.6|EPB41L4A|ENSG00000129595.14|erythrocyte membrane protein band 4.1 like 4A
hg38_v1_chr1_-_85048437_85048519	0.102693	GLI3	ENST00000341115.8|MCOLN3|ENSG00000055732.13|mucolipin TRP cation channel 3	ENST00000370587.5|MCOLN3|ENSG00000055732.13|mucolipin TRP cation channel 3	ENST00000370589.7|MCOLN3|ENSG00000055732.13|mucolipin TRP cation channel 3
hg38_v1_chr15_-_42920798_42920815	0.102546	GLI3	ENST00000622375.4|TTBK2|ENSG00000128881.17|tau tubulin kinase 2	ENST00000567840.5|TTBK2|ENSG00000128881.17|tau tubulin kinase 2
hg38_v1_chr11_-_69013356_69013382	0.102168	GLI3	ENST00000441623.1|MRGPRF|ENSG00000172935.9|MAS related GPR family member F
hg38_v1_chr11_+_60756953_60757003	0.102059	GLI3	ENST00000528170.5|MS4A15|ENSG00000166961.15|membrane spanning 4-domains A15	ENST00000337911.8|MS4A15|ENSG00000166961.15|membrane spanning 4-domains A15
hg38_v1_chr12_-_56636318_56636389	0.101409	GLI3	ENST00000549506.5|BAZ2A|ENSG00000076108.12|bromodomain adjacent to zinc finger domain 2A	ENST00000379441.7|BAZ2A|ENSG00000076108.12|bromodomain adjacent to zinc finger domain 2A	ENST00000551812.5|BAZ2A|ENSG00000076108.12|bromodomain adjacent to zinc finger domain 2A
hg38_v1_chr3_-_38649668_38649713	0.101399	GLI3	ENST00000333535.9|SCN5A|ENSG00000183873.18|sodium voltage-gated channel alpha subunit 5	ENST00000413689.6|SCN5A|ENSG00000183873.18|sodium voltage-gated channel alpha subunit 5	ENST00000423572.7|SCN5A|ENSG00000183873.18|sodium voltage-gated channel alpha subunit 5
hg38_v1_chr11_-_625168_625198	0.101288	GLI3	ENST00000349570.11|CDHR5|ENSG00000099834.19|cadherin related family member 5
hg38_v1_chr12_-_92929236_92929336	0.101139	GLI3	ENST00000322349.13|EEA1|ENSG00000102189.17|early endosome antigen 1
hg38_v1_chr1_-_39575686_39575913	0.100959	GLI3	ENST00000677006.1|PABPC4|ENSG00000090621.15|poly(A) binding protein cytoplasmic 4	ENST00000678625.1|PABPC4|ENSG00000090621.15|poly(A) binding protein cytoplasmic 4	ENST00000677609.1|PABPC4|ENSG00000090621.15|poly(A) binding protein cytoplasmic 4
hg38_v1_chr15_+_73994694_73994776	0.100936	GLI3	ENST00000268058.8|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000395132.6|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000268059.10|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000354026.10|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000565898.5|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000569477.5|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000569965.5|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000567543.5|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000436891.7|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000435786.6|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000564428.5|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000359928.8|PML|ENSG00000140464.20|PML nuclear body scaffold
hg38_v1_chr2_+_96325294_96325355	0.100606	GLI3	ENST00000439118.3|ITPRIPL1|ENSG00000198885.10|ITPRIP like 1	ENST00000420176.5|ITPRIPL1|ENSG00000198885.10|ITPRIP like 1	ENST00000536814.1|ITPRIPL1|ENSG00000198885.10|ITPRIP like 1
hg38_v1_chr15_-_45129857_45129938	0.100534	GLI3	ENST00000267803.8|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000613425.4|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000559014.5|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000558851.1|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000559988.5|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000558996.5|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000558422.5|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000559226.5|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000560572.6|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000558326.5|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000558377.5|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000559644.5|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1
hg38_v1_chr20_+_63735463_63735463	0.100406	GLI3	ENST00000496820.2|ENSG00000273154.3|ENSG00000273154.3|novel protein, ZGPAT-LIME1 readthrough
hg38_v1_chr3_-_138132381_138132394	0.100276	GLI3	ENST00000236709.4|A4GNT|ENSG00000118017.4|alpha-1,4-N-acetylglucosaminyltransferase
hg38_v1_chr2_+_237858874_237858896	0.100262	GLI3	ENST00000404910.6|RAMP1|ENSG00000132329.11|receptor activity modifying protein 1
hg38_v1_chr9_+_129110948_129110964	0.100171	GLI3	ENST00000358994.9|PTPA|ENSG00000119383.21|protein phosphatase 2 phosphatase activator	ENST00000455292.6|PTPA|ENSG00000119383.21|protein phosphatase 2 phosphatase activator
hg38_v1_chr12_-_4445810_4445816	0.0999724	GLI3	ENST00000228837.3|FGF6|ENSG00000111241.3|fibroblast growth factor 6
hg38_v1_chr1_+_155308748_155308923	0.0995236	GLI3	ENST00000611010.4|FDPS|ENSG00000160752.15|farnesyl diphosphate synthase	ENST00000447866.5|FDPS|ENSG00000160752.15|farnesyl diphosphate synthase	ENST00000368356.9|FDPS|ENSG00000160752.15|farnesyl diphosphate synthase	ENST00000467076.5|FDPS|ENSG00000160752.15|farnesyl diphosphate synthase	ENST00000491013.5|FDPS|ENSG00000160752.15|farnesyl diphosphate synthase	ENST00000356657.10|FDPS|ENSG00000160752.15|farnesyl diphosphate synthase
hg38_v1_chr21_+_46635595_46635696	0.0993454	GLI3	ENST00000451211.6|PRMT2|ENSG00000160310.18|protein arginine methyltransferase 2	ENST00000458387.6|PRMT2|ENSG00000160310.18|protein arginine methyltransferase 2	ENST00000397638.6|PRMT2|ENSG00000160310.18|protein arginine methyltransferase 2	ENST00000291705.11|PRMT2|ENSG00000160310.18|protein arginine methyltransferase 2	ENST00000397637.5|PRMT2|ENSG00000160310.18|protein arginine methyltransferase 2	ENST00000334494.8|PRMT2|ENSG00000160310.18|protein arginine methyltransferase 2	ENST00000397628.5|PRMT2|ENSG00000160310.18|protein arginine methyltransferase 2	ENST00000355680.8|PRMT2|ENSG00000160310.18|protein arginine methyltransferase 2	ENST00000440086.5|PRMT2|ENSG00000160310.18|protein arginine methyltransferase 2
hg38_v1_chr2_+_233692881_233692905	0.0988453	GLI3	ENST00000305139.11|UGT1A6|ENSG00000167165.19|UDP glucuronosyltransferase family 1 member A6
hg38_v1_chr14_+_103629177_103629297	0.0987348	GLI3	ENST00000348520.10|KLC1|ENSG00000126214.21|kinesin light chain 1	ENST00000380038.7|KLC1|ENSG00000126214.21|kinesin light chain 1	ENST00000389744.8|KLC1|ENSG00000126214.21|kinesin light chain 1	ENST00000557575.5|KLC1|ENSG00000126214.21|kinesin light chain 1	ENST00000553286.5|KLC1|ENSG00000126214.21|kinesin light chain 1	ENST00000347839.10|KLC1|ENSG00000126214.21|kinesin light chain 1	ENST00000555836.5|KLC1|ENSG00000126214.21|kinesin light chain 1	ENST00000334553.10|KLC1|ENSG00000126214.21|kinesin light chain 1	ENST00000246489.11|KLC1|ENSG00000126214.21|kinesin light chain 1	ENST00000634686.1|KLC1|ENSG00000126214.21|kinesin light chain 1	ENST00000557450.5|KLC1|ENSG00000126214.21|kinesin light chain 1	ENST00000452929.6|KLC1|ENSG00000126214.21|kinesin light chain 1	ENST00000554280.5|KLC1|ENSG00000126214.21|kinesin light chain 1	ENST00000445352.8|KLC1|ENSG00000126214.21|kinesin light chain 1
hg38_v1_chr10_+_134703_134824	0.0987073	GLI3	ENST00000509513.6|ZMYND11|ENSG00000015171.20|zinc finger MYND-type containing 11
hg38_v1_chrX_+_149881141_149881192	0.0985983	GLI3	ENST00000535454.5|MAGEA8|ENSG00000156009.10|MAGE family member A8	ENST00000542674.5|MAGEA8|ENSG00000156009.10|MAGE family member A8	ENST00000286482.6|MAGEA8|ENSG00000156009.10|MAGE family member A8
hg38_v1_chr19_+_58451607_58451653	0.0975219	GLI3	ENST00000545523.5|ZNF324B|ENSG00000249471.8|zinc finger protein 324B	ENST00000599194.5|ZNF324B|ENSG00000249471.8|zinc finger protein 324B	ENST00000336614.9|ZNF324B|ENSG00000249471.8|zinc finger protein 324B	ENST00000598244.5|ZNF324B|ENSG00000249471.8|zinc finger protein 324B	ENST00000599193.5|ZNF324B|ENSG00000249471.8|zinc finger protein 324B	ENST00000594214.1|ZNF324B|ENSG00000249471.8|zinc finger protein 324B
hg38_v1_chr19_-_47886308_47886349	0.0970763	GLI3	ENST00000222002.4|SULT2A1|ENSG00000105398.4|sulfotransferase family 2A member 1
hg38_v1_chr4_-_95548956_95548979	0.0970749	GLI3	ENST00000513796.5|UNC5C|ENSG00000182168.15|unc-5 netrin receptor C	ENST00000453304.6|UNC5C|ENSG00000182168.15|unc-5 netrin receptor C
hg38_v1_chr10_+_70672457_70672543	0.0969109	GLI3	ENST00000373207.2|ADAMTS14|ENSG00000138316.11|ADAM metallopeptidase with thrombospondin type 1 motif 14
hg38_v1_chr10_+_103396607_103396691	0.0966124	GLI3	ENST00000649849.1|PDCD11|ENSG00000148843.15|programmed cell death 11	ENST00000369797.8|PDCD11|ENSG00000148843.15|programmed cell death 11
hg38_v1_chr19_+_49363730_49363882	0.0964366	GLI3	ENST00000596402.1|DKKL1|ENSG00000104901.7|dickkopf like acrosomal protein 1	ENST00000221498.7|DKKL1|ENSG00000104901.7|dickkopf like acrosomal protein 1
hg38_v1_chr17_+_82830496_82830551	0.0962965	GLI3	ENST00000683821.1|TBCD|ENSG00000141556.22|tubulin folding cofactor D
hg38_v1_chr19_-_16572304_16572432	0.0959475	GLI3	ENST00000436553.6|SLC35E1|ENSG00000127526.15|solute carrier family 35 member E1	ENST00000595753.6|SLC35E1|ENSG00000127526.15|solute carrier family 35 member E1
hg38_v1_chr1_-_1375490_1375542	0.0955089	GLI3	ENST00000338338.9|AURKAIP1|ENSG00000175756.13|aurora kinase A interacting protein 1
hg38_v1_chr16_+_55656294_55656440	0.0952319	GLI3	ENST00000379906.6|SLC6A2|ENSG00000103546.19|solute carrier family 6 member 2
hg38_v1_chr7_+_45888479_45888497	0.0948969	GLI3	ENST00000275525.8|IGFBP1|ENSG00000146678.10|insulin like growth factor binding protein 1	ENST00000468955.1|IGFBP1|ENSG00000146678.10|insulin like growth factor binding protein 1
hg38_v1_chr13_-_113410938_113410981	0.0945794	GLI3	ENST00000682618.1|ADPRHL1|ENSG00000153531.14|ADP-ribosylhydrolase like 1
hg38_v1_chr11_+_46380746_46380756	0.0944077	GLI3	ENST00000405308.6|MDK|ENSG00000110492.16|midkine
hg38_v1_chr17_+_77405070_77405090	0.0941054	GLI3	ENST00000585930.5|SEPTIN9|ENSG00000184640.20|septin 9
hg38_v1_chr19_+_7507082_7507082	0.0940662	GLI3	ENST00000599312.1|ENSG00000267952.1|ENSG00000267952.1|novel transcript
hg38_v1_chr11_-_64744102_64744159	0.093679	GLI3	ENST00000431822.5|RASGRP2|ENSG00000068831.19|RAS guanyl releasing protein 2	ENST00000394432.8|RASGRP2|ENSG00000068831.19|RAS guanyl releasing protein 2	ENST00000377486.7|RASGRP2|ENSG00000068831.19|RAS guanyl releasing protein 2
hg38_v1_chr17_-_15619512_15619512	0.0935709	GLI3	ENST00000395667.7|CDRT1|ENSG00000241322.11|CMT1A duplicated region transcript 1
hg38_v1_chr17_+_45999250_45999250	0.0933111	GLI3	ENST00000537309.1|STH|ENSG00000256762.1|saitohin
hg38_v1_chr17_-_81937221_81937274	0.0931794	GLI3	ENST00000402252.6|PYCR1|ENSG00000183010.17|pyrroline-5-carboxylate reductase 1	ENST00000583564.5|PYCR1|ENSG00000183010.17|pyrroline-5-carboxylate reductase 1	ENST00000585244.1|PYCR1|ENSG00000183010.17|pyrroline-5-carboxylate reductase 1	ENST00000337943.9|PYCR1|ENSG00000183010.17|pyrroline-5-carboxylate reductase 1	ENST00000579698.5|PYCR1|ENSG00000183010.17|pyrroline-5-carboxylate reductase 1
hg38_v1_chr9_+_137665916_137665956	0.0931741	GLI3	ENST00000636027.1|EHMT1|ENSG00000181090.21|euchromatic histone lysine methyltransferase 1
hg38_v1_chr11_-_17077647_17077683	0.0930834	GLI3	ENST00000533969.1|RPS13|ENSG00000110700.7|ribosomal protein S13	ENST00000228140.6|RPS13|ENSG00000110700.7|ribosomal protein S13	ENST00000525634.6|RPS13|ENSG00000110700.7|ribosomal protein S13
hg38_v1_chr9_-_34620443_34620523	0.0929432	GLI3	ENST00000421919.5|DCTN3|ENSG00000137100.16|dynactin subunit 3	ENST00000378911.3|DCTN3|ENSG00000137100.16|dynactin subunit 3	ENST00000477738.6|DCTN3|ENSG00000137100.16|dynactin subunit 3	ENST00000341694.6|DCTN3|ENSG00000137100.16|dynactin subunit 3	ENST00000378913.6|DCTN3|ENSG00000137100.16|dynactin subunit 3	ENST00000259632.12|DCTN3|ENSG00000137100.16|dynactin subunit 3	ENST00000378916.8|DCTN3|ENSG00000137100.16|dynactin subunit 3
hg38_v1_chr15_-_100544677_100544720	0.0925738	GLI3	ENST00000284382.8|CERS3|ENSG00000154227.14|ceramide synthase 3
hg38_v1_chr22_+_45163910_45164000	0.0925737	GLI3	ENST00000347635.9|NUP50|ENSG00000093000.19|nucleoporin 50	ENST00000407019.6|NUP50|ENSG00000093000.19|nucleoporin 50	ENST00000424634.5|NUP50|ENSG00000093000.19|nucleoporin 50	ENST00000417702.5|NUP50|ENSG00000093000.19|nucleoporin 50	ENST00000430547.5|NUP50|ENSG00000093000.19|nucleoporin 50
hg38_v1_chr1_-_37692205_37692281	0.0923523	GLI3	ENST00000477060.1|C1orf109|ENSG00000116922.15|chromosome 1 open reading frame 109	ENST00000491981.5|C1orf109|ENSG00000116922.15|chromosome 1 open reading frame 109	ENST00000488137.5|C1orf109|ENSG00000116922.15|chromosome 1 open reading frame 109	ENST00000619962.1|C1orf109|ENSG00000116922.15|chromosome 1 open reading frame 109
hg38_v1_chr9_-_128127711_128127759	0.0922629	GLI3	ENST00000449878.1|PTGES2|ENSG00000148334.16|prostaglandin E synthase 2	ENST00000338961.11|PTGES2|ENSG00000148334.16|prostaglandin E synthase 2	ENST00000678174.1|PTGES2|ENSG00000148334.16|prostaglandin E synthase 2
hg38_v1_chr17_-_13601901_13601982	0.0918223	GLI3	ENST00000284110.2|HS3ST3A1|ENSG00000153976.3|heparan sulfate-glucosamine 3-sulfotransferase 3A1
hg38_v1_chr1_+_13171848_13171848	0.0910767	GLI3	ENST00000415919.3|PRAMEF9|ENSG00000204505.5|PRAME family member 9
hg38_v1_chr11_-_1763894_1763957	0.0909312	GLI3	ENST00000637915.1|CTSD|ENSG00000117984.15|cathepsin D	ENST00000637815.2|CTSD|ENSG00000117984.15|cathepsin D	ENST00000236671.7|CTSD|ENSG00000117984.15|cathepsin D	ENST00000636571.1|CTSD|ENSG00000117984.15|cathepsin D	ENST00000438213.6|CTSD|ENSG00000117984.15|cathepsin D	ENST00000636397.1|ENSG00000250644.3|ENSG00000250644.3|novel protein	ENST00000637387.1|CTSD|ENSG00000117984.15|cathepsin D	ENST00000636843.1|CTSD|ENSG00000117984.15|cathepsin D	ENST00000636615.1|ENSG00000250644.3|ENSG00000250644.3|novel protein
hg38_v1_chr4_-_46389351_46389399	0.0907159	GLI3	ENST00000503806.5|GABRA2|ENSG00000151834.16|gamma-aminobutyric acid type A receptor subunit alpha2	ENST00000356504.5|GABRA2|ENSG00000151834.16|gamma-aminobutyric acid type A receptor subunit alpha2	ENST00000514090.5|GABRA2|ENSG00000151834.16|gamma-aminobutyric acid type A receptor subunit alpha2	ENST00000506961.5|GABRA2|ENSG00000151834.16|gamma-aminobutyric acid type A receptor subunit alpha2
hg38_v1_chr11_+_66070256_66070395	0.0902693	GLI3	ENST00000320580.9|PACS1|ENSG00000175115.13|phosphofurin acidic cluster sorting protein 1
hg38_v1_chr13_-_36297838_36297886	0.0901839	GLI3	ENST00000511166.1|CCDC169-SOHLH2|ENSG00000250709.1|CCDC169-SOHLH2 readthrough
hg38_v1_chr20_+_56468585_56468695	0.0901647	GLI3	ENST00000023939.8|RTF2|ENSG00000022277.13|replication termination factor 2	ENST00000395881.7|RTF2|ENSG00000022277.13|replication termination factor 2	ENST00000357348.10|RTF2|ENSG00000022277.13|replication termination factor 2	ENST00000449062.1|RTF2|ENSG00000022277.13|replication termination factor 2
hg38_v1_chr6_+_35468393_35468417	0.0901247	GLI3	ENST00000322203.7|RPL10A|ENSG00000198755.11|ribosomal protein L10a
hg38_v1_chr1_-_46941425_46941459	0.0901089	GLI3	ENST00000371904.8|CYP4A11|ENSG00000187048.13|cytochrome P450 family 4 subfamily A member 11
hg38_v1_chr11_-_65606959_65607026	0.0895877	GLI3	ENST00000532507.5|MAP3K11|ENSG00000173327.8|mitogen-activated protein kinase kinase kinase 11
hg38_v1_chr3_-_12841527_12841587	0.0895724	GLI3	ENST00000396953.6|RPL32|ENSG00000144713.13|ribosomal protein L32	ENST00000457131.1|RPL32|ENSG00000144713.13|ribosomal protein L32	ENST00000435983.5|RPL32|ENSG00000144713.13|ribosomal protein L32	ENST00000273223.10|RPL32|ENSG00000144713.13|ribosomal protein L32	ENST00000429711.7|RPL32|ENSG00000144713.13|ribosomal protein L32	ENST00000396957.5|RPL32|ENSG00000144713.13|ribosomal protein L32
hg38_v1_chr7_-_122144231_122144296	0.0893155	GLI3	ENST00000679511.1|AASS|ENSG00000008311.16|aminoadipate-semialdehyde synthase	ENST00000417368.7|AASS|ENSG00000008311.16|aminoadipate-semialdehyde synthase	ENST00000473553.5|AASS|ENSG00000008311.16|aminoadipate-semialdehyde synthase
hg38_v1_chr19_+_36973211_36973224	0.0890087	GLI3	ENST00000586353.5|ZNF568|ENSG00000198453.13|zinc finger protein 568	ENST00000433993.5|ZNF568|ENSG00000198453.13|zinc finger protein 568	ENST00000592567.1|ZNF568|ENSG00000198453.13|zinc finger protein 568
hg38_v1_chr1_-_161021096_161021159	0.088979	GLI3	ENST00000537746.1|F11R|ENSG00000158769.18|F11 receptor	ENST00000368026.11|F11R|ENSG00000158769.18|F11 receptor
hg38_v1_chr1_-_25906931_25906991	0.0886696	GLI3	ENST00000357865.6|STMN1|ENSG00000117632.23|stathmin 1
hg38_v1_chr19_-_23758837_23758870	0.0885976	GLI3	ENST00000531570.1|ZNF681|ENSG00000196172.9|zinc finger protein 681	ENST00000528059.1|ZNF681|ENSG00000196172.9|zinc finger protein 681
hg38_v1_chr1_-_207911384_207911402	0.0884617	GLI3	ENST00000356522.4|CD34|ENSG00000174059.17|CD34 molecule
hg38_v1_chr11_+_18172837_18172837	0.0884031	GLI3	ENST00000314254.3|MRGPRX4|ENSG00000179817.5|MAS related GPR family member X4
hg38_v1_chr8_+_143684499_143684518	0.0879326	GLI3	ENST00000526315.5|ZNF707|ENSG00000181135.16|zinc finger protein 707	ENST00000532205.5|ZNF707|ENSG00000181135.16|zinc finger protein 707
hg38_v1_chr1_+_6450374_6450392	0.087863	GLI3	ENST00000475479.2|ESPN|ENSG00000187017.17|espin
hg38_v1_chr16_+_165966_165985	0.0877707	GLI3	ENST00000356815.4|HBM|ENSG00000206177.7|hemoglobin subunit mu
hg38_v1_chr12_+_49972837_49972952	0.0877135	GLI3	ENST00000618286.1|AQP6|ENSG00000086159.13|aquaporin 6	ENST00000315520.10|AQP6|ENSG00000086159.13|aquaporin 6
hg38_v1_chr22_-_30574572_30574593	0.0876987	GLI3	ENST00000402369.5|GAL3ST1|ENSG00000128242.13|galactose-3-O-sulfotransferase 1
hg38_v1_chr19_-_53824288_53824394	0.0876804	GLI3	ENST00000324134.11|NLRP12|ENSG00000142405.22|NLR family pyrin domain containing 12	ENST00000391773.6|NLRP12|ENSG00000142405.22|NLR family pyrin domain containing 12	ENST00000391775.7|NLRP12|ENSG00000142405.22|NLR family pyrin domain containing 12	ENST00000345770.9|NLRP12|ENSG00000142405.22|NLR family pyrin domain containing 12	ENST00000391772.1|NLRP12|ENSG00000142405.22|NLR family pyrin domain containing 12
hg38_v1_chr19_-_19170248_19170289	0.0870215	GLI3	ENST00000410050.5|MEF2B|ENSG00000213999.17|myocyte enhancer factor 2B	ENST00000424583.7|MEF2B|ENSG00000213999.17|myocyte enhancer factor 2B	ENST00000409224.5|MEF2B|ENSG00000213999.17|myocyte enhancer factor 2B	ENST00000409447.2|MEF2B|ENSG00000213999.17|myocyte enhancer factor 2B
hg38_v1_chr6_-_35512863_35512876	0.0868587	GLI3	ENST00000428978.1|TULP1|ENSG00000112041.13|TUB like protein 1	ENST00000614066.4|TULP1|ENSG00000112041.13|TUB like protein 1	ENST00000322263.8|TULP1|ENSG00000112041.13|TUB like protein 1
hg38_v1_chr3_-_15427497_15427551	0.0867441	GLI3	ENST00000443029.5|METTL6|ENSG00000206562.12|methyltransferase like 6	ENST00000383789.9|METTL6|ENSG00000206562.12|methyltransferase like 6	ENST00000450816.6|METTL6|ENSG00000206562.12|methyltransferase like 6	ENST00000383790.8|METTL6|ENSG00000206562.12|methyltransferase like 6
hg38_v1_chr2_+_96326204_96326223	0.0866834	GLI3	ENST00000420728.1|ITPRIPL1|ENSG00000198885.10|ITPRIP like 1	ENST00000361124.5|ITPRIPL1|ENSG00000198885.10|ITPRIP like 1
hg38_v1_chr2_+_97113600_97113665	0.0865555	GLI3	ENST00000620383.1|ANKRD36|ENSG00000135976.20|ankyrin repeat domain 36
hg38_v1_chr16_+_67199104_67199158	0.0864826	GLI3	ENST00000360833.6|ELMO3|ENSG00000102890.16|engulfment and cell motility 3	ENST00000652269.1|ELMO3|ENSG00000102890.16|engulfment and cell motility 3	ENST00000393997.8|ELMO3|ENSG00000102890.16|engulfment and cell motility 3
hg38_v1_chr17_+_78214186_78214285	0.0864744	GLI3	ENST00000301633.8|BIRC5|ENSG00000089685.15|baculoviral IAP repeat containing 5	ENST00000350051.8|BIRC5|ENSG00000089685.15|baculoviral IAP repeat containing 5	ENST00000374948.6|BIRC5|ENSG00000089685.15|baculoviral IAP repeat containing 5	ENST00000590449.1|BIRC5|ENSG00000089685.15|baculoviral IAP repeat containing 5
hg38_v1_chr16_-_11587162_11587289	0.0864041	GLI3	ENST00000570904.5|LITAF|ENSG00000189067.14|lipopolysaccharide induced TNF factor	ENST00000574701.5|LITAF|ENSG00000189067.14|lipopolysaccharide induced TNF factor
hg38_v1_chr22_+_50486835_50486876	0.0856767	GLI3	ENST00000216075.11|MIOX|ENSG00000100253.13|myo-inositol oxygenase	ENST00000395732.7|MIOX|ENSG00000100253.13|myo-inositol oxygenase
hg38_v1_chr1_-_243255320_243255346	0.085619	GLI3	ENST00000366544.5|CEP170|ENSG00000143702.16|centrosomal protein 170	ENST00000366543.5|CEP170|ENSG00000143702.16|centrosomal protein 170
hg38_v1_chr12_+_51238854_51238886	0.0853376	GLI3	ENST00000549732.6|DAZAP2|ENSG00000183283.16|DAZ associated protein 2	ENST00000604900.5|DAZAP2|ENSG00000183283.16|DAZ associated protein 2
hg38_v1_chr12_-_124989053_124989139	0.0852168	GLI3	ENST00000308736.7|DHX37|ENSG00000150990.9|DEAH-box helicase 37
hg38_v1_chr19_-_54281082_54281116	0.0849455	GLI3	ENST00000314446.10|LILRB2|ENSG00000131042.15|leukocyte immunoglobulin like receptor B2
hg38_v1_chr6_+_11537738_11537797	0.0848996	GLI3	ENST00000379426.2|TMEM170B|ENSG00000205269.6|transmembrane protein 170B
hg38_v1_chr14_-_106389858_106389858	0.084384	GLI3	ENST00000390617.2|IGHV3-35|ENSG00000211957.2|immunoglobulin heavy variable 3-35 (non-functional)
hg38_v1_chr7_+_120273129_120273183	0.0843578	GLI3	ENST00000331113.9|KCND2|ENSG00000184408.10|potassium voltage-gated channel subfamily D member 2
hg38_v1_chrX_+_55000329_55000398	0.0842756	GLI3	ENST00000374987.4|APEX2|ENSG00000169188.5|apurinic/apyrimidinic endodeoxyribonuclease 2
hg38_v1_chrX_+_49053554_49053584	0.0838115	GLI3	ENST00000597275.5|CCDC120|ENSG00000147144.13|coiled-coil domain containing 120
hg38_v1_chr22_-_40856565_40856665	0.0837985	GLI3	ENST00000620312.4|ST13|ENSG00000100380.14|ST13 Hsp70 interacting protein	ENST00000216218.8|ST13|ENSG00000100380.14|ST13 Hsp70 interacting protein
hg38_v1_chr3_-_177197210_177197233	0.0837566	GLI3	ENST00000431421.5|TBL1XR1|ENSG00000177565.18|TBL1X receptor 1	ENST00000422066.5|TBL1XR1|ENSG00000177565.18|TBL1X receptor 1	ENST00000413084.5|TBL1XR1|ENSG00000177565.18|TBL1X receptor 1	ENST00000673974.1|TBL1XR1|ENSG00000177565.18|TBL1X receptor 1	ENST00000422442.6|TBL1XR1|ENSG00000177565.18|TBL1X receptor 1
hg38_v1_chr19_-_3868993_3869044	0.0836249	GLI3	ENST00000674260.1|ZFR2|ENSG00000105278.12|zinc finger RNA binding protein 2	ENST00000592398.1|ZFR2|ENSG00000105278.12|zinc finger RNA binding protein 2	ENST00000439086.2|ZFR2|ENSG00000105278.12|zinc finger RNA binding protein 2	ENST00000262961.9|ZFR2|ENSG00000105278.12|zinc finger RNA binding protein 2
hg38_v1_chr3_-_48635426_48635493	0.0833833	GLI3	ENST00000455886.6|SLC26A6|ENSG00000225697.13|solute carrier family 26 member 6	ENST00000431739.5|SLC26A6|ENSG00000225697.13|solute carrier family 26 member 6	ENST00000426599.1|SLC26A6|ENSG00000225697.13|solute carrier family 26 member 6	ENST00000383733.7|SLC26A6|ENSG00000225697.13|solute carrier family 26 member 6	ENST00000395550.7|SLC26A6|ENSG00000225697.13|solute carrier family 26 member 6	ENST00000420764.6|SLC26A6|ENSG00000225697.13|solute carrier family 26 member 6	ENST00000337000.12|SLC26A6|ENSG00000225697.13|solute carrier family 26 member 6
hg38_v1_chr7_+_142424942_142424971	0.0833039	GLI3	ENST00000426318.2|TRBV10-2|ENSG00000229769.2|T cell receptor beta variable 10-2
hg38_v1_chr6_-_73523757_73523866	0.0832025	GLI3	ENST00000455918.2|EEF1A1|ENSG00000156508.19|eukaryotic translation elongation factor 1 alpha 1	ENST00000677236.1|EEF1A1|ENSG00000156508.19|eukaryotic translation elongation factor 1 alpha 1
hg38_v1_chr7_+_107168961_107169010	0.0831231	GLI3	ENST00000468410.5|HBP1|ENSG00000105856.14|HMG-box transcription factor 1	ENST00000478930.5|HBP1|ENSG00000105856.14|HMG-box transcription factor 1	ENST00000464009.1|HBP1|ENSG00000105856.14|HMG-box transcription factor 1	ENST00000222574.9|HBP1|ENSG00000105856.14|HMG-box transcription factor 1
hg38_v1_chr19_-_40285395_40285536	0.0830337	GLI3	ENST00000424901.5|AKT2|ENSG00000105221.18|AKT serine/threonine kinase 2	ENST00000578123.5|AKT2|ENSG00000105221.18|AKT serine/threonine kinase 2
hg38_v1_chr3_-_72446623_72446623	0.0830213	GLI3	ENST00000477973.4|RYBP|ENSG00000163602.11|RING1 and YY1 binding protein
hg38_v1_chr11_+_66258467_66258545	0.0829264	GLI3	ENST00000394066.6|KLC2|ENSG00000174996.12|kinesin light chain 2
hg38_v1_chr7_-_100436425_100436521	0.0828603	GLI3	ENST00000292330.3|PPP1R35|ENSG00000160813.7|protein phosphatase 1 regulatory subunit 35
hg38_v1_chr7_+_23106267_23106298	0.0826544	GLI3	ENST00000409689.5|KLHL7|ENSG00000122550.18|kelch like family member 7	ENST00000410047.1|KLHL7|ENSG00000122550.18|kelch like family member 7
hg38_v1_chr2_+_112721486_112721486	0.0823669	GLI3	ENST00000327581.4|NT5DC4|ENSG00000144130.11|5'-nucleotidase domain containing 4
hg38_v1_chr19_+_18831951_18832001	0.0823556	GLI3	ENST00000262803.10|UPF1|ENSG00000005007.13|UPF1 RNA helicase and ATPase	ENST00000599848.5|UPF1|ENSG00000005007.13|UPF1 RNA helicase and ATPase
hg38_v1_chr2_+_27628996_27629063	0.082083	GLI3	ENST00000616939.4|GPN1|ENSG00000198522.14|GPN-loop GTPase 1	ENST00000264718.7|GPN1|ENSG00000198522.14|GPN-loop GTPase 1	ENST00000610189.2|GPN1|ENSG00000198522.14|GPN-loop GTPase 1
hg38_v1_chr7_+_116672357_116672448	0.0820583	GLI3	ENST00000456159.1|MET|ENSG00000105976.16|MET proto-oncogene, receptor tyrosine kinase
hg38_v1_chrX_-_72808210_72808210	0.0820524	GLI3	ENST00000419795.6|FAM236D|ENSG00000225396.6|family with sequence similarity 236 member D	ENST00000458170.1|FAM236D|ENSG00000225396.6|family with sequence similarity 236 member D
hg38_v1_chr9_+_32552305_32552346	0.0820134	GLI3	ENST00000451672.2|SMIM27|ENSG00000235453.11|small integral membrane protein 27	ENST00000644531.1|SMIM27|ENSG00000235453.11|small integral membrane protein 27
hg38_v1_chrX_-_9033310_9033310	0.081682	GLI3	ENST00000362066.7|FAM9B|ENSG00000177138.17|family with sequence similarity 9 member B
hg38_v1_chr12_-_10882602_10882657	0.0816616	GLI3	ENST00000538332.2|PRH1|ENSG00000231887.7|proline rich protein HaeIII subfamily 1
hg38_v1_chr21_-_32612577_32612593	0.0815826	GLI3	ENST00000673985.1|CFAP298-TCP10L|ENSG00000265590.10|CFAP298-TCP10L readthrough	ENST00000382549.8|CFAP298|ENSG00000159079.19|cilia and flagella associated protein 298
hg38_v1_chr10_-_103452384_103452426	0.0814754	GLI3	ENST00000369788.7|CALHM2|ENSG00000138172.11|calcium homeostasis modulator family member 2
hg38_v1_chr2_+_231056845_231056925	0.0814331	GLI3	ENST00000677230.1|PSMD1|ENSG00000173692.14|proteasome 26S subunit, non-ATPase 1	ENST00000677259.1|PSMD1|ENSG00000173692.14|proteasome 26S subunit, non-ATPase 1	ENST00000677180.1|PSMD1|ENSG00000173692.14|proteasome 26S subunit, non-ATPase 1	ENST00000409643.6|PSMD1|ENSG00000173692.14|proteasome 26S subunit, non-ATPase 1	ENST00000619128.5|PSMD1|ENSG00000173692.14|proteasome 26S subunit, non-ATPase 1	ENST00000678679.1|PSMD1|ENSG00000173692.14|proteasome 26S subunit, non-ATPase 1	ENST00000676740.1|PSMD1|ENSG00000173692.14|proteasome 26S subunit, non-ATPase 1	ENST00000308696.11|PSMD1|ENSG00000173692.14|proteasome 26S subunit, non-ATPase 1	ENST00000440838.5|PSMD1|ENSG00000173692.14|proteasome 26S subunit, non-ATPase 1	ENST00000373635.9|PSMD1|ENSG00000173692.14|proteasome 26S subunit, non-ATPase 1
hg38_v1_chr1_-_31065671_31065785	0.0813732	GLI3	ENST00000440538.6|PUM1|ENSG00000134644.16|pumilio RNA binding family member 1	ENST00000424085.6|PUM1|ENSG00000134644.16|pumilio RNA binding family member 1	ENST00000257075.9|PUM1|ENSG00000134644.16|pumilio RNA binding family member 1	ENST00000373747.7|PUM1|ENSG00000134644.16|pumilio RNA binding family member 1	ENST00000426105.7|PUM1|ENSG00000134644.16|pumilio RNA binding family member 1	ENST00000525843.5|PUM1|ENSG00000134644.16|pumilio RNA binding family member 1	ENST00000373742.6|PUM1|ENSG00000134644.16|pumilio RNA binding family member 1
hg38_v1_chr7_+_44044663_44044733	0.0813088	GLI3	ENST00000456905.5|DBNL|ENSG00000136279.21|drebrin like	ENST00000440166.5|DBNL|ENSG00000136279.21|drebrin like	ENST00000452943.5|DBNL|ENSG00000136279.21|drebrin like	ENST00000448521.6|DBNL|ENSG00000136279.21|drebrin like	ENST00000468694.5|DBNL|ENSG00000136279.21|drebrin like	ENST00000494774.5|DBNL|ENSG00000136279.21|drebrin like
hg38_v1_chr15_+_45402324_45402368	0.0811558	GLI3	ENST00000305560.11|SPATA5L1|ENSG00000171763.20|spermatogenesis associated 5 like 1
hg38_v1_chr16_-_18433412_18433412	0.0810925	GLI3	ENST00000620440.4|NOMO2|ENSG00000185164.15|NODAL modulator 2
hg38_v1_chr1_-_25905989_25906153	0.0803898	GLI3	ENST00000399728.5|STMN1|ENSG00000117632.23|stathmin 1
hg38_v1_chr1_-_36464262_36464430	0.0803281	GLI3	ENST00000373116.6|MRPS15|ENSG00000116898.12|mitochondrial ribosomal protein S15
hg38_v1_chr11_+_134276344_134276394	0.0799793	GLI3	ENST00000431683.7|GLB1L3|ENSG00000166105.16|galactosidase beta 1 like 3
hg38_v1_chr22_-_32255344_32255349	0.0798249	GLI3	ENST00000266086.6|SLC5A4|ENSG00000100191.6|solute carrier family 5 member 4
hg38_v1_chr6_+_116370938_116371050	0.07974	GLI3	ENST00000644252.3|DSE|ENSG00000111817.19|dermatan sulfate epimerase	ENST00000646710.1|DSE|ENSG00000111817.19|dermatan sulfate epimerase	ENST00000359564.3|DSE|ENSG00000111817.19|dermatan sulfate epimerase
hg38_v1_chr16_+_27427242_27427261	0.0796651	GLI3	ENST00000395754.4|IL21R|ENSG00000103522.16|interleukin 21 receptor
hg38_v1_chr7_+_150405668_150405737	0.0795821	GLI3	ENST00000642087.1|ENSG00000284691.1|ENSG00000284691.1|novel zinc finger protein
hg38_v1_chr10_+_100735390_100735402	0.0795515	GLI3	ENST00000679374.1|PAX2|ENSG00000075891.23|paired box 2
hg38_v1_chr22_+_22322452_22322472	0.0793844	GLI3	ENST00000390290.3|IGLV1-51|ENSG00000211644.3|immunoglobulin lambda variable 1-51
hg38_v1_chr19_+_4153616_4153668	0.0792582	GLI3	ENST00000078445.7|CREB3L3|ENSG00000060566.14|cAMP responsive element binding protein 3 like 3	ENST00000595923.5|CREB3L3|ENSG00000060566.14|cAMP responsive element binding protein 3 like 3	ENST00000602257.5|CREB3L3|ENSG00000060566.14|cAMP responsive element binding protein 3 like 3	ENST00000602147.1|CREB3L3|ENSG00000060566.14|cAMP responsive element binding protein 3 like 3
hg38_v1_chr5_+_81301634_81301657	0.0791814	GLI3	ENST00000438268.2|ZCCHC9|ENSG00000131732.12|zinc finger CCHC-type containing 9
hg38_v1_chrX_+_116436599_116436616	0.0789491	GLI3	ENST00000598581.3|SLC6A14|ENSG00000268104.3|solute carrier family 6 member 14
hg38_v1_chr18_+_3451585_3451608	0.0786153	GLI3	ENST00000551541.5|TGIF1|ENSG00000177426.22|TGFB induced factor homeobox 1
hg38_v1_chr19_-_2456924_2456983	0.0783672	GLI3	ENST00000325327.4|LMNB2|ENSG00000176619.13|lamin B2
hg38_v1_chr8_-_41797589_41797641	0.0783607	GLI3	ENST00000347528.8|ANK1|ENSG00000029534.21|ankyrin 1	ENST00000289734.13|ANK1|ENSG00000029534.21|ankyrin 1
hg38_v1_chr11_+_66257696_66257719	0.0783209	GLI3	ENST00000421552.5|KLC2|ENSG00000174996.12|kinesin light chain 2	ENST00000394067.7|KLC2|ENSG00000174996.12|kinesin light chain 2	ENST00000316924.9|KLC2|ENSG00000174996.12|kinesin light chain 2	ENST00000394078.5|KLC2|ENSG00000174996.12|kinesin light chain 2
hg38_v1_chr11_+_121102666_121102666	0.0781382	GLI3	ENST00000264037.2|TECTA|ENSG00000109927.11|tectorin alpha
hg38_v1_chr9_-_95317671_95317727	0.0780836	GLI3	ENST00000490972.7|FANCC|ENSG00000158169.13|FA complementation group C	ENST00000647778.1|FANCC|ENSG00000158169.13|FA complementation group C	ENST00000649611.1|FANCC|ENSG00000158169.13|FA complementation group C	ENST00000289081.8|FANCC|ENSG00000158169.13|FA complementation group C
hg38_v1_chr19_-_54281145_54281184	0.0779476	GLI3	ENST00000434421.5|LILRB2|ENSG00000131042.15|leukocyte immunoglobulin like receptor B2	ENST00000391749.4|LILRB2|ENSG00000131042.15|leukocyte immunoglobulin like receptor B2
hg38_v1_chrX_+_73447042_73447072	0.0778495	GLI3	ENST00000373514.3|CDX4|ENSG00000131264.4|caudal type homeobox 4
hg38_v1_chr7_-_151814819_151815024	0.0778444	GLI3	ENST00000392801.6|PRKAG2|ENSG00000106617.15|protein kinase AMP-activated non-catalytic subunit gamma 2	ENST00000652707.1|PRKAG2|ENSG00000106617.15|protein kinase AMP-activated non-catalytic subunit gamma 2	ENST00000651378.1|PRKAG2|ENSG00000106617.15|protein kinase AMP-activated non-catalytic subunit gamma 2
hg38_v1_chr12_+_53295506_53295565	0.0775753	GLI3	ENST00000549759.2|PFDN5|ENSG00000123349.15|prefoldin subunit 5	ENST00000628881.2|PFDN5|ENSG00000123349.15|prefoldin subunit 5	ENST00000351500.7|PFDN5|ENSG00000123349.15|prefoldin subunit 5	ENST00000550846.5|PFDN5|ENSG00000123349.15|prefoldin subunit 5	ENST00000334478.9|PFDN5|ENSG00000123349.15|prefoldin subunit 5	ENST00000547130.6|PFDN5|ENSG00000123349.15|prefoldin subunit 5	ENST00000552742.6|PFDN5|ENSG00000123349.15|prefoldin subunit 5
hg38_v1_chr3_-_51875597_51875602	0.0774809	GLI3	ENST00000446461.2|IQCF5|ENSG00000214681.4|IQ motif containing F5
hg38_v1_chr2_-_240820945_240821050	0.0774753	GLI3	ENST00000428768.2|KIF1A|ENSG00000130294.18|kinesin family member 1A	ENST00000650053.1|KIF1A|ENSG00000130294.18|kinesin family member 1A	ENST00000650130.1|KIF1A|ENSG00000130294.18|kinesin family member 1A
hg38_v1_chr11_-_119057218_119057229	0.0771908	GLI3	ENST00000652093.1|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1
hg38_v1_chr19_-_18255385_18255419	0.0771506	GLI3	ENST00000355502.7|ENSG00000285188.1|ENSG00000285188.1|novel protein	ENST00000643046.1|ENSG00000284797.1|ENSG00000284797.1|novel protein
hg38_v1_chr10_-_96358989_96359015	0.0770319	GLI3	ENST00000371172.8|OPALIN|ENSG00000197430.11|oligodendrocytic myelin paranodal and inner loop protein
hg38_v1_chr15_+_85380672_85380756	0.0766545	GLI3	ENST00000361243.6|AKAP13|ENSG00000170776.22|A-kinase anchoring protein 13	ENST00000560256.1|AKAP13|ENSG00000170776.22|A-kinase anchoring protein 13
hg38_v1_chr14_+_71586261_71586286	0.0765361	GLI3	ENST00000358550.6|SIPA1L1|ENSG00000197555.10|signal induced proliferation associated 1 like 1
hg38_v1_chr6_+_30717433_30717441	0.0762833	GLI3	ENST00000681435.1|TUBB|ENSG00000196230.14|tubulin beta class I
hg38_v1_chr7_+_101218146_101218191	0.0761289	GLI3	ENST00000305105.3|ZNHIT1|ENSG00000106400.12|zinc finger HIT-type containing 1
hg38_v1_chr1_-_207911027_207911162	0.076107	GLI3	ENST00000310833.12|CD34|ENSG00000174059.17|CD34 molecule
hg38_v1_chr2_+_11612253_11612273	0.0756914	GLI3	ENST00000396123.2|GREB1|ENSG00000196208.14|growth regulating estrogen receptor binding 1
hg38_v1_chr19_-_3480512_3480532	0.0756041	GLI3	ENST00000215531.6|SMIM24|ENSG00000095932.7|small integral membrane protein 24
hg38_v1_chr17_+_732560_732616	0.075424	GLI3	ENST00000301324.8|TLCD3A|ENSG00000167695.15|TLC domain containing 3A	ENST00000308278.13|TLCD3A|ENSG00000167695.15|TLC domain containing 3A
hg38_v1_chr3_+_184561768_184561795	0.0753831	GLI3	ENST00000330394.3|EPHB3|ENSG00000182580.3|EPH receptor B3
hg38_v1_chr17_-_81869934_81870006	0.0752473	GLI3	ENST00000580685.5|ARHGDIA|ENSG00000141522.12|Rho GDP dissociation inhibitor alpha
hg38_v1_chr15_+_75336018_75336041	0.0748511	GLI3	ENST00000567195.5|COMMD4|ENSG00000140365.16|COMM domain containing 4
hg38_v1_chr16_+_2682515_2682540	0.0746995	GLI3	ENST00000301738.9|KCTD5|ENSG00000167977.9|potassium channel tetramerization domain containing 5	ENST00000564195.1|KCTD5|ENSG00000167977.9|potassium channel tetramerization domain containing 5
hg38_v1_chr1_+_17539676_17539767	0.0745075	GLI3	ENST00000361221.8|ARHGEF10L|ENSG00000074964.17|Rho guanine nucleotide exchange factor 10 like
hg38_v1_chr20_+_45791978_45792055	0.0736671	GLI3	ENST00000449078.5|DNTTIP1|ENSG00000101457.13|deoxynucleotidyltransferase terminal interacting protein 1	ENST00000456939.5|DNTTIP1|ENSG00000101457.13|deoxynucleotidyltransferase terminal interacting protein 1
hg38_v1_chr19_-_54222978_54223087	0.0736332	GLI3	ENST00000245620.13|LILRB3|ENSG00000204577.11|leukocyte immunoglobulin like receptor B3	ENST00000346401.10|LILRB3|ENSG00000204577.11|leukocyte immunoglobulin like receptor B3	ENST00000445347.1|LILRB3|ENSG00000204577.11|leukocyte immunoglobulin like receptor B3
hg38_v1_chr17_-_75153826_75153876	0.0729067	GLI3	ENST00000481647.5|JPT1|ENSG00000189159.16|Jupiter microtubule associated homolog 1	ENST00000470924.5|JPT1|ENSG00000189159.16|Jupiter microtubule associated homolog 1
hg38_v1_chr22_-_24005409_24005457	0.0728938	GLI3	ENST00000621179.5|GSTT4|ENSG00000276950.5|glutathione S-transferase theta 4
hg38_v1_chrX_-_108736556_108736569	0.0724906	GLI3	ENST00000372129.4|IRS4|ENSG00000133124.12|insulin receptor substrate 4
hg38_v1_chr17_-_7857938_7858079	0.0723082	GLI3	ENST00000575208.2|NAA38|ENSG00000183011.14|N-alpha-acetyltransferase 38, NatC auxiliary subunit
hg38_v1_chr8_+_22245125_22245235	0.072133	GLI3	ENST00000306433.9|POLR3D|ENSG00000168495.13|RNA polymerase III subunit D	ENST00000519237.5|POLR3D|ENSG00000168495.13|RNA polymerase III subunit D	ENST00000397802.8|POLR3D|ENSG00000168495.13|RNA polymerase III subunit D
hg38_v1_chr17_-_18258556_18258770	0.0718614	GLI3	ENST00000579294.5|FLII|ENSG00000177731.16|FLII actin remodeling protein	ENST00000628188.1|FLII|ENSG00000177731.16|FLII actin remodeling protein	ENST00000545457.6|FLII|ENSG00000177731.16|FLII actin remodeling protein	ENST00000578558.5|FLII|ENSG00000177731.16|FLII actin remodeling protein	ENST00000327031.9|FLII|ENSG00000177731.16|FLII actin remodeling protein
hg38_v1_chr22_+_39014249_39014268	0.071827	GLI3	ENST00000361441.5|APOBEC3C|ENSG00000244509.4|apolipoprotein B mRNA editing enzyme catalytic subunit 3C
hg38_v1_chr17_-_6651427_6651482	0.0718243	GLI3	ENST00000574128.1|MED31|ENSG00000108590.11|mediator complex subunit 31
hg38_v1_chr14_-_20587962_20588047	0.0718081	GLI3	ENST00000557105.5|RNASE11|ENSG00000173464.14|ribonuclease A family member 11 (inactive)	ENST00000398008.6|RNASE11|ENSG00000173464.14|ribonuclease A family member 11 (inactive)	ENST00000620912.4|RNASE11|ENSG00000173464.14|ribonuclease A family member 11 (inactive)	ENST00000555841.5|RNASE11|ENSG00000173464.14|ribonuclease A family member 11 (inactive)	ENST00000443456.6|RNASE11|ENSG00000173464.14|ribonuclease A family member 11 (inactive)	ENST00000432835.6|RNASE11|ENSG00000173464.14|ribonuclease A family member 11 (inactive)	ENST00000557503.5|RNASE11|ENSG00000173464.14|ribonuclease A family member 11 (inactive)	ENST00000398009.6|RNASE11|ENSG00000173464.14|ribonuclease A family member 11 (inactive)	ENST00000554842.1|RNASE11|ENSG00000173464.14|ribonuclease A family member 11 (inactive)
hg38_v1_chr10_-_24723185_24723278	0.0717419	GLI3	ENST00000376410.7|ARHGAP21|ENSG00000107863.19|Rho GTPase activating protein 21	ENST00000446003.5|ARHGAP21|ENSG00000107863.19|Rho GTPase activating protein 21
hg38_v1_chr9_+_4839761_4839780	0.0714646	GLI3	ENST00000448872.6|RCL1|ENSG00000120158.12|RNA terminal phosphate cyclase like 1	ENST00000441844.2|RCL1|ENSG00000120158.12|RNA terminal phosphate cyclase like 1
hg38_v1_chr17_-_1516699_1516742	0.0713918	GLI3	ENST00000320345.10|INPP5K|ENSG00000132376.20|inositol polyphosphate-5-phosphatase K	ENST00000406424.8|INPP5K|ENSG00000132376.20|inositol polyphosphate-5-phosphatase K
hg38_v1_chr11_-_65862026_65862056	0.0713912	GLI3	ENST00000532134.5|CFL1|ENSG00000172757.13|cofilin 1
hg38_v1_chr19_-_43596123_43596150	0.0713864	GLI3	ENST00000422989.6|IRGQ|ENSG00000167378.9|immunity related GTPase Q	ENST00000598324.1|IRGQ|ENSG00000167378.9|immunity related GTPase Q
hg38_v1_chrX_+_1615049_1615072	0.0712674	GLI3	ENST00000381241.9|ASMT|ENSG00000196433.13|acetylserotonin O-methyltransferase
hg38_v1_chr11_+_33258304_33258384	0.0710622	GLI3	ENST00000531504.5|HIPK3|ENSG00000110422.12|homeodomain interacting protein kinase 3	ENST00000456517.2|HIPK3|ENSG00000110422.12|homeodomain interacting protein kinase 3
hg38_v1_chr22_-_45977154_45977169	0.0710323	GLI3	ENST00000339464.9|WNT7B|ENSG00000188064.10|Wnt family member 7B
hg38_v1_chr1_-_235161215_235161298	0.0707599	GLI3	ENST00000447801.5|RBM34|ENSG00000188739.15|RNA binding motif protein 34	ENST00000408888.8|RBM34|ENSG00000188739.15|RNA binding motif protein 34	ENST00000429912.1|RBM34|ENSG00000188739.15|RNA binding motif protein 34
hg38_v1_chr1_+_154974672_154974700	0.0705552	GLI3	ENST00000308987.6|CKS1B|ENSG00000173207.13|CDC28 protein kinase regulatory subunit 1B	ENST00000368436.1|CKS1B|ENSG00000173207.13|CDC28 protein kinase regulatory subunit 1B
hg38_v1_chr3_-_129183874_129183928	0.0705353	GLI3	ENST00000422453.7|CNBP|ENSG00000169714.17|CCHC-type zinc finger nucleic acid binding protein	ENST00000451728.6|CNBP|ENSG00000169714.17|CCHC-type zinc finger nucleic acid binding protein	ENST00000446936.6|CNBP|ENSG00000169714.17|CCHC-type zinc finger nucleic acid binding protein	ENST00000502976.5|CNBP|ENSG00000169714.17|CCHC-type zinc finger nucleic acid binding protein	ENST00000500450.6|CNBP|ENSG00000169714.17|CCHC-type zinc finger nucleic acid binding protein	ENST00000441626.6|CNBP|ENSG00000169714.17|CCHC-type zinc finger nucleic acid binding protein	ENST00000504813.5|CNBP|ENSG00000169714.17|CCHC-type zinc finger nucleic acid binding protein	ENST00000512338.1|CNBP|ENSG00000169714.17|CCHC-type zinc finger nucleic acid binding protein
hg38_v1_chr8_+_22024731_22024851	0.0699116	GLI3	ENST00000289820.10|NPM2|ENSG00000158806.14|nucleophosmin/nucleoplasmin 2	ENST00000381530.9|NPM2|ENSG00000158806.14|nucleophosmin/nucleoplasmin 2
hg38_v1_chr8_+_89902529_89902628	0.069839	GLI3	ENST00000451899.7|OSGIN2|ENSG00000164823.11|oxidative stress induced growth inhibitor family member 2
hg38_v1_chr6_-_73354255_73354283	0.069635	GLI3	ENST00000370370.4|DPPA5|ENSG00000203909.4|developmental pluripotency associated 5
hg38_v1_chr22_+_31127749_31127802	0.0696255	GLI3	ENST00000402238.5|INPP5J|ENSG00000185133.14|inositol polyphosphate-5-phosphatase J	ENST00000404453.5|INPP5J|ENSG00000185133.14|inositol polyphosphate-5-phosphatase J	ENST00000401755.1|INPP5J|ENSG00000185133.14|inositol polyphosphate-5-phosphatase J
hg38_v1_chr12_-_103957122_103957273	0.0696189	GLI3	ENST00000552940.1|C12orf73|ENSG00000204954.10|chromosome 12 open reading frame 73	ENST00000547975.5|C12orf73|ENSG00000204954.10|chromosome 12 open reading frame 73	ENST00000549478.1|C12orf73|ENSG00000204954.10|chromosome 12 open reading frame 73	ENST00000546540.1|C12orf73|ENSG00000204954.10|chromosome 12 open reading frame 73	ENST00000378090.9|C12orf73|ENSG00000204954.10|chromosome 12 open reading frame 73	ENST00000546819.1|C12orf73|ENSG00000204954.10|chromosome 12 open reading frame 73	ENST00000547945.5|C12orf73|ENSG00000204954.10|chromosome 12 open reading frame 73
hg38_v1_chr12_-_57016517_57016566	0.0693465	GLI3	ENST00000441881.5|TAC3|ENSG00000166863.13|tachykinin precursor 3	ENST00000458521.7|TAC3|ENSG00000166863.13|tachykinin precursor 3
hg38_v1_chr17_+_82235769_82235778	0.0693386	GLI3	ENST00000619321.2|SLC16A3|ENSG00000141526.18|solute carrier family 16 member 3
hg38_v1_chr3_-_119559599_119559632	0.0690909	GLI3	ENST00000264246.8|CD80|ENSG00000121594.12|CD80 molecule
hg38_v1_chr1_+_8945858_8945887	0.0689726	GLI3	ENST00000549778.5|CA6|ENSG00000131686.15|carbonic anhydrase 6	ENST00000377443.7|CA6|ENSG00000131686.15|carbonic anhydrase 6	ENST00000480186.7|CA6|ENSG00000131686.15|carbonic anhydrase 6	ENST00000377436.6|CA6|ENSG00000131686.15|carbonic anhydrase 6	ENST00000377442.3|CA6|ENSG00000131686.15|carbonic anhydrase 6
hg38_v1_chr17_-_76053639_76053666	0.068837	GLI3	ENST00000602720.5|SRP68|ENSG00000167881.15|signal recognition particle 68
hg38_v1_chr8_+_22024125_22024141	0.0687943	GLI3	ENST00000520125.5|NPM2|ENSG00000158806.14|nucleophosmin/nucleoplasmin 2	ENST00000521157.5|NPM2|ENSG00000158806.14|nucleophosmin/nucleoplasmin 2	ENST00000397940.5|NPM2|ENSG00000158806.14|nucleophosmin/nucleoplasmin 2	ENST00000518119.6|NPM2|ENSG00000158806.14|nucleophosmin/nucleoplasmin 2	ENST00000522813.5|NPM2|ENSG00000158806.14|nucleophosmin/nucleoplasmin 2
hg38_v1_chr9_+_129803175_129803268	0.0680083	GLI3	ENST00000259339.7|TOR1B|ENSG00000136816.16|torsin family 1 member B	ENST00000427860.1|TOR1B|ENSG00000136816.16|torsin family 1 member B
hg38_v1_chr1_-_43367956_43368032	0.0675906	GLI3	ENST00000372458.8|ELOVL1|ENSG00000066322.15|ELOVL fatty acid elongase 1
hg38_v1_chr5_-_180815528_180815561	0.0672801	GLI3	ENST00000333055.8|MGAT1|ENSG00000131446.17|alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
hg38_v1_chr1_+_1632152_1632210	0.0672392	GLI3	ENST00000472264.1|MMP23B|ENSG00000189409.14|matrix metallopeptidase 23B	ENST00000356026.10|MMP23B|ENSG00000189409.14|matrix metallopeptidase 23B	ENST00000378675.7|MMP23B|ENSG00000189409.14|matrix metallopeptidase 23B
hg38_v1_chr16_+_28985095_28985123	0.0670029	GLI3	ENST00000454369.6|LAT|ENSG00000213658.12|linker for activation of T cells
hg38_v1_chr22_-_40862070_40862119	0.0668847	GLI3	ENST00000307221.5|DNAJB7|ENSG00000172404.5|DnaJ heat shock protein family (Hsp40) member B7
hg38_v1_chr22_+_50090028_50090065	0.0668376	GLI3	ENST00000395858.7|MOV10L1|ENSG00000073146.16|Mov10 like RISC complex RNA helicase 1
hg38_v1_chrX_+_23667461_23667564	0.066762	GLI3	ENST00000379341.9|PRDX4|ENSG00000123131.13|peroxiredoxin 4	ENST00000379331.3|PRDX4|ENSG00000123131.13|peroxiredoxin 4
hg38_v1_chr17_-_1516601_1516619	0.0660889	GLI3	ENST00000421807.7|INPP5K|ENSG00000132376.20|inositol polyphosphate-5-phosphatase K	ENST00000477910.5|INPP5K|ENSG00000132376.20|inositol polyphosphate-5-phosphatase K	ENST00000575172.5|INPP5K|ENSG00000132376.20|inositol polyphosphate-5-phosphatase K
hg38_v1_chr20_+_3209469_3209528	0.0660704	GLI3	ENST00000380113.8|ITPA|ENSG00000125877.13|inosine triphosphatase	ENST00000455664.6|ITPA|ENSG00000125877.13|inosine triphosphatase	ENST00000399838.3|ITPA|ENSG00000125877.13|inosine triphosphatase
hg38_v1_chr3_-_183428580_183428778	0.0659145	GLI3	ENST00000328913.8|MCF2L2|ENSG00000053524.13|MCF.2 cell line derived transforming sequence-like 2	ENST00000482017.1|MCF2L2|ENSG00000053524.13|MCF.2 cell line derived transforming sequence-like 2
hg38_v1_chr1_+_234373667_234373701	0.065665	GLI3	ENST00000366613.1|COA6|ENSG00000168275.16|cytochrome c oxidase assembly factor 6	ENST00000366612.1|COA6|ENSG00000168275.16|cytochrome c oxidase assembly factor 6
hg38_v1_chr6_-_26027274_26027295	0.065646	GLI3	ENST00000377745.4|H4C2|ENSG00000278705.2|H4 clustered histone 2
hg38_v1_chr5_-_181241605_181241641	0.0655138	GLI3	ENST00000504128.5|RACK1|ENSG00000204628.12|receptor for activated C kinase 1
hg38_v1_chr8_+_93916882_93917007	0.0652796	GLI3	ENST00000297598.5|PDP1|ENSG00000164951.16|pyruvate dehyrogenase phosphatase catalytic subunit 1	ENST00000520728.5|PDP1|ENSG00000164951.16|pyruvate dehyrogenase phosphatase catalytic subunit 1	ENST00000518107.5|PDP1|ENSG00000164951.16|pyruvate dehyrogenase phosphatase catalytic subunit 1	ENST00000396200.3|PDP1|ENSG00000164951.16|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg38_v1_chrX_-_3713593_3713660	0.0651065	GLI3	ENST00000262848.6|PRKX|ENSG00000183943.6|protein kinase X-linked
hg38_v1_chr9_-_129110649_129110814	0.0649478	GLI3	ENST00000455830.2|CRAT|ENSG00000095321.18|carnitine O-acetyltransferase	ENST00000455396.2|CRAT|ENSG00000095321.18|carnitine O-acetyltransferase	ENST00000393384.3|CRAT|ENSG00000095321.18|carnitine O-acetyltransferase	ENST00000681627.1|CRAT|ENSG00000095321.18|carnitine O-acetyltransferase	ENST00000681325.1|CRAT|ENSG00000095321.18|carnitine O-acetyltransferase	ENST00000680117.1|CRAT|ENSG00000095321.18|carnitine O-acetyltransferase	ENST00000681725.1|CRAT|ENSG00000095321.18|carnitine O-acetyltransferase	ENST00000318080.7|CRAT|ENSG00000095321.18|carnitine O-acetyltransferase
hg38_v1_chr1_+_228165794_228165815	0.0643204	GLI3	ENST00000366711.4|IBA57|ENSG00000181873.13|iron-sulfur cluster assembly factor IBA57
hg38_v1_chr19_+_7534004_7534204	0.0643107	GLI3	ENST00000221249.10|PNPLA6|ENSG00000032444.17|patatin like phospholipase domain containing 6	ENST00000601668.5|PNPLA6|ENSG00000032444.17|patatin like phospholipase domain containing 6	ENST00000601001.5|PNPLA6|ENSG00000032444.17|patatin like phospholipase domain containing 6
hg38_v1_chr2_-_95121788_95121828	0.0640385	GLI3	ENST00000272418.7|MRPS5|ENSG00000144029.12|mitochondrial ribosomal protein S5
hg38_v1_chr21_-_32612339_32612416	0.0640123	GLI3	ENST00000440966.5|CFAP298|ENSG00000159079.19|cilia and flagella associated protein 298	ENST00000290155.8|CFAP298|ENSG00000159079.19|cilia and flagella associated protein 298
hg38_v1_chr16_+_55656089_55656111	0.0637876	GLI3	ENST00000414754.7|SLC6A2|ENSG00000103546.19|solute carrier family 6 member 2
hg38_v1_chr7_-_108456378_108456445	0.0635901	GLI3	ENST00000613830.4|NRCAM|ENSG00000091129.21|neuronal cell adhesion molecule	ENST00000413765.6|NRCAM|ENSG00000091129.21|neuronal cell adhesion molecule	ENST00000379028.8|NRCAM|ENSG00000091129.21|neuronal cell adhesion molecule
hg38_v1_chr7_-_74254362_74254458	0.0635819	GLI3	ENST00000352131.7|RFC2|ENSG00000049541.11|replication factor C subunit 2	ENST00000055077.8|RFC2|ENSG00000049541.11|replication factor C subunit 2	ENST00000621097.4|RFC2|ENSG00000049541.11|replication factor C subunit 2
hg38_v1_chr1_+_91949343_91949385	0.0635614	GLI3	ENST00000448194.6|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000470955.6|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000362005.7|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000370389.6|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000394530.7|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000423434.5|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000440509.5|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000426141.6|BRDT|ENSG00000137948.19|bromodomain testis associated
hg38_v1_chr17_-_17591658_17591723	0.0634864	GLI3	ENST00000435340.6|PEMT|ENSG00000133027.18|phosphatidylethanolamine N-methyltransferase	ENST00000255389.10|PEMT|ENSG00000133027.18|phosphatidylethanolamine N-methyltransferase	ENST00000395781.6|PEMT|ENSG00000133027.18|phosphatidylethanolamine N-methyltransferase
hg38_v1_chr15_+_43185382_43185458	0.0630624	GLI3	ENST00000300213.9|CCNDBP1|ENSG00000166946.14|cyclin D1 binding protein 1
hg38_v1_chr6_-_35512882_35512902	0.0630357	GLI3	ENST00000229771.11|TULP1|ENSG00000112041.13|TUB like protein 1
hg38_v1_chr20_-_37158904_37158904	0.0629141	GLI3	ENST00000417458.5|MROH8|ENSG00000101353.15|maestro heat like repeat family member 8
hg38_v1_chr7_+_87934143_87934175	0.0626073	GLI3	ENST00000398204.8|ADAM22|ENSG00000008277.15|ADAM metallopeptidase domain 22
hg38_v1_chrX_+_71283577_71283761	0.0623842	GLI3	ENST00000420903.6|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000373856.8|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000678437.1|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000678830.1|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000677879.1|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000373841.5|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000276079.13|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000676797.1|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000678660.1|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000678231.1|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000677612.1|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000413858.5|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000450092.6|NONO|ENSG00000147140.17|non-POU domain containing octamer binding
hg38_v1_chr5_-_163460048_163460060	0.0623386	GLI3	ENST00000517501.1|NUDCD2|ENSG00000170584.11|NudC domain containing 2
hg38_v1_chr14_+_20955484_20955506	0.0621355	GLI3	ENST00000304625.3|RNASE2|ENSG00000169385.3|ribonuclease A family member 2
hg38_v1_chr12_-_6493295_6493306	0.0620886	GLI3	ENST00000540949.1|MRPL51|ENSG00000111639.8|mitochondrial ribosomal protein L51
hg38_v1_chr20_+_2816302_2816336	0.0620712	GLI3	ENST00000361033.1|TMEM239|ENSG00000198326.10|transmembrane protein 239
hg38_v1_chr9_+_121286115_121286141	0.061783	GLI3	ENST00000477104.2|GSN|ENSG00000148180.21|gelsolin	ENST00000394353.7|GSN|ENSG00000148180.21|gelsolin
hg38_v1_chr6_+_159761991_159762072	0.0616217	GLI3	ENST00000367048.5|ACAT2|ENSG00000120437.9|acetyl-CoA acetyltransferase 2
hg38_v1_chr11_+_122838492_122838507	0.0615725	GLI3	ENST00000227348.9|CRTAM|ENSG00000109943.9|cytotoxic and regulatory T cell molecule
hg38_v1_chr8_-_6999198_6999198	0.061263	GLI3	ENST00000382689.8|DEFA1B|ENSG00000240247.8|defensin alpha 1B
hg38_v1_chr19_-_40285277_40285362	0.0612284	GLI3	ENST00000579047.5|AKT2|ENSG00000105221.18|AKT serine/threonine kinase 2	ENST00000392038.7|AKT2|ENSG00000105221.18|AKT serine/threonine kinase 2
hg38_v1_chr1_+_154974653_154974671	0.0610069	GLI3	ENST00000368439.5|CKS1B|ENSG00000173207.13|CDC28 protein kinase regulatory subunit 1B
hg38_v1_chr19_-_12775513_12775620	0.0609402	GLI3	ENST00000397668.8|HOOK2|ENSG00000095066.12|hook microtubule tethering protein 2	ENST00000587178.1|HOOK2|ENSG00000095066.12|hook microtubule tethering protein 2	ENST00000264827.9|HOOK2|ENSG00000095066.12|hook microtubule tethering protein 2
hg38_v1_chr17_+_63477052_63477070	0.0609171	GLI3	ENST00000290866.10|ACE|ENSG00000159640.17|angiotensin I converting enzyme	ENST00000428043.5|ACE|ENSG00000159640.17|angiotensin I converting enzyme
hg38_v1_chr1_-_10964201_10964201	0.06091	GLI3	ENST00000418570.6|C1orf127|ENSG00000175262.14|chromosome 1 open reading frame 127
hg38_v1_chr3_-_177197429_177197492	0.0607953	GLI3	ENST00000457928.7|TBL1XR1|ENSG00000177565.18|TBL1X receptor 1
hg38_v1_chr15_+_85380565_85380614	0.0606853	GLI3	ENST00000559362.5|AKAP13|ENSG00000170776.22|A-kinase anchoring protein 13	ENST00000394518.7|AKAP13|ENSG00000170776.22|A-kinase anchoring protein 13
hg38_v1_chrX_+_1615158_1615175	0.0604946	GLI3	ENST00000381229.9|ASMT|ENSG00000196433.13|acetylserotonin O-methyltransferase	ENST00000381233.8|ASMT|ENSG00000196433.13|acetylserotonin O-methyltransferase
hg38_v1_chr1_-_202159977_202160038	0.059917	GLI3	ENST00000367279.8|PTPN7|ENSG00000143851.15|protein tyrosine phosphatase non-receptor type 7
hg38_v1_chr16_-_2268111_2268146	0.0597102	GLI3	ENST00000301730.12|RNPS1|ENSG00000205937.12|RNA binding protein with serine rich domain 1	ENST00000564822.1|RNPS1|ENSG00000205937.12|RNA binding protein with serine rich domain 1	ENST00000320225.10|RNPS1|ENSG00000205937.12|RNA binding protein with serine rich domain 1
hg38_v1_chr3_-_42581936_42582028	0.059446	GLI3	ENST00000423701.6|SEC22C|ENSG00000093183.14|SEC22 homolog C, vesicle trafficking protein	ENST00000420163.1|SEC22C|ENSG00000093183.14|SEC22 homolog C, vesicle trafficking protein	ENST00000416880.5|SEC22C|ENSG00000093183.14|SEC22 homolog C, vesicle trafficking protein	ENST00000264454.8|SEC22C|ENSG00000093183.14|SEC22 homolog C, vesicle trafficking protein	ENST00000273156.11|SEC22C|ENSG00000093183.14|SEC22 homolog C, vesicle trafficking protein
hg38_v1_chr19_-_57578872_57578920	0.0593057	GLI3	ENST00000196489.4|ZNF416|ENSG00000083817.9|zinc finger protein 416
hg38_v1_chr12_-_2835018_2835044	0.0592952	GLI3	ENST00000337508.9|NRIP2|ENSG00000053702.15|nuclear receptor interacting protein 2
hg38_v1_chr5_-_157575741_157575758	0.0592165	GLI3	ENST00000517905.1|ADAM19|ENSG00000135074.16|ADAM metallopeptidase domain 19
hg38_v1_chr22_-_42144549_42144577	0.0590502	GLI3	ENST00000614967.4|CYP2D7|ENSG00000205702.11|cytochrome P450 family 2 subfamily D member 7 (gene/pseudogene)	ENST00000612115.1|CYP2D7|ENSG00000205702.11|cytochrome P450 family 2 subfamily D member 7 (gene/pseudogene)
hg38_v1_chr11_+_60056653_60056688	0.057739	GLI3	ENST00000278865.8|MS4A3|ENSG00000149516.14|membrane spanning 4-domains A3
hg38_v1_chr22_-_22559229_22559340	0.0574789	GLI3	ENST00000405655.8|PRAME|ENSG00000185686.18|PRAME nuclear receptor transcriptional regulator	ENST00000406503.1|PRAME|ENSG00000185686.18|PRAME nuclear receptor transcriptional regulator	ENST00000439106.5|PRAME|ENSG00000185686.18|PRAME nuclear receptor transcriptional regulator	ENST00000402697.5|PRAME|ENSG00000185686.18|PRAME nuclear receptor transcriptional regulator	ENST00000543184.5|PRAME|ENSG00000185686.18|PRAME nuclear receptor transcriptional regulator	ENST00000398743.6|PRAME|ENSG00000185686.18|PRAME nuclear receptor transcriptional regulator
hg38_v1_chr17_-_3557798_3557832	0.0574431	GLI3	ENST00000301365.8|TRPV3|ENSG00000167723.15|transient receptor potential cation channel subfamily V member 3	ENST00000572519.1|TRPV3|ENSG00000167723.15|transient receptor potential cation channel subfamily V member 3	ENST00000576742.6|TRPV3|ENSG00000167723.15|transient receptor potential cation channel subfamily V member 3
hg38_v1_chr13_+_27251545_27251566	0.0573296	GLI3	ENST00000311549.11|RPL21|ENSG00000122026.11|ribosomal protein L21
hg38_v1_chr22_-_30557586_30557730	0.0572438	GLI3	ENST00000338911.6|GAL3ST1|ENSG00000128242.13|galactose-3-O-sulfotransferase 1	ENST00000453479.1|GAL3ST1|ENSG00000128242.13|galactose-3-O-sulfotransferase 1
hg38_v1_chr1_+_91949395_91949434	0.0572209	GLI3	ENST00000449584.5|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000427104.5|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000355011.7|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000399546.7|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000450792.5|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000548992.5|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000552654.1|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000457265.1|BRDT|ENSG00000137948.19|bromodomain testis associated
hg38_v1_chr8_+_10525529_10525546	0.0570515	GLI3	ENST00000328655.8|PRSS55|ENSG00000184647.11|serine protease 55	ENST00000522210.1|PRSS55|ENSG00000184647.11|serine protease 55
hg38_v1_chrX_+_104166436_104166459	0.0568965	GLI3	ENST00000493442.2|FAM199X|ENSG00000123575.9|family with sequence similarity 199, X-linked
hg38_v1_chr17_-_82450716_82450829	0.056855	GLI3	ENST00000583617.5|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000578913.5|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000580560.5|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000584503.5|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000577834.5|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000584891.5|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000306645.10|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000342572.12|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000585064.5|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000585080.5|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000578919.5|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000434650.6|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000581196.5|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1
hg38_v1_chr15_-_65029576_65029646	0.0566684	GLI3	ENST00000220058.9|MTFMT|ENSG00000103707.10|mitochondrial methionyl-tRNA formyltransferase
hg38_v1_chr22_+_22409755_22409771	0.056456	GLI3	ENST00000390299.2|IGLV1-40|ENSG00000211653.2|immunoglobulin lambda variable 1-40
hg38_v1_chr2_+_233636445_233636454	0.0562862	GLI3	ENST00000344644.9|UGT1A10|ENSG00000242515.5|UDP glucuronosyltransferase family 1 member A10
hg38_v1_chr19_-_50837213_50837213	0.0562691	GLI3	ENST00000326856.8|KLK15|ENSG00000174562.13|kallikrein related peptidase 15
hg38_v1_chr5_-_178232537_178232630	0.0562578	GLI3	ENST00000476170.2|PHYKPL|ENSG00000175309.15|5-phosphohydroxy-L-lysine phospho-lyase	ENST00000323594.8|PHYKPL|ENSG00000175309.15|5-phosphohydroxy-L-lysine phospho-lyase
hg38_v1_chr11_+_2386057_2386095	0.0560343	GLI3	ENST00000381036.7|CD81|ENSG00000110651.12|CD81 molecule	ENST00000492252.5|CD81|ENSG00000110651.12|CD81 molecule
hg38_v1_chr1_+_35930712_35930755	0.0560054	GLI3	ENST00000324350.9|AGO3|ENSG00000126070.20|argonaute RISC catalytic component 3
hg38_v1_chr15_+_41621492_41621554	0.0557293	GLI3	ENST00000570161.6|MGA|ENSG00000174197.17|MAX dimerization protein MGA
hg38_v1_chr7_-_108456321_108456340	0.0554643	GLI3	ENST00000379024.8|NRCAM|ENSG00000091129.21|neuronal cell adhesion molecule	ENST00000351718.8|NRCAM|ENSG00000091129.21|neuronal cell adhesion molecule
hg38_v1_chr12_+_68809002_68809031	0.0552195	GLI3	ENST00000539479.6|MDM2|ENSG00000135679.26|MDM2 proto-oncogene	ENST00000393415.7|MDM2|ENSG00000135679.26|MDM2 proto-oncogene	ENST00000523991.5|MDM2|ENSG00000135679.26|MDM2 proto-oncogene	ENST00000543323.5|MDM2|ENSG00000135679.26|MDM2 proto-oncogene	ENST00000393416.7|MDM2|ENSG00000135679.26|MDM2 proto-oncogene
hg38_v1_chr6_-_53348902_53348974	0.0552015	GLI3	ENST00000370913.5|ELOVL5|ENSG00000012660.14|ELOVL fatty acid elongase 5	ENST00000304434.11|ELOVL5|ENSG00000012660.14|ELOVL fatty acid elongase 5
hg38_v1_chr6_-_166956537_166956558	0.0551309	GLI3	ENST00000508775.6|RNASET2|ENSG00000026297.17|ribonuclease T2
hg38_v1_chr2_-_3558280_3558368	0.0550527	GLI3	ENST00000315212.4|RNASEH1|ENSG00000171865.10|ribonuclease H1
hg38_v1_chr15_-_89912882_89912967	0.0541628	GLI3	ENST00000398333.7|ARPIN-AP3S2|ENSG00000250021.7|ARPIN-AP3S2 readthrough	ENST00000357484.10|ARPIN|ENSG00000242498.8|actin related protein 2/3 complex inhibitor
hg38_v1_chr22_+_39077264_39077293	0.0539075	GLI3	ENST00000407997.4|APOBEC3G|ENSG00000239713.9|apolipoprotein B mRNA editing enzyme catalytic subunit 3G
hg38_v1_chr9_+_133534807_133534853	0.0536209	GLI3	ENST00000393060.1|ADAMTSL2|ENSG00000197859.11|ADAMTS like 2
hg38_v1_chr10_-_35642286_35642303	0.0533539	GLI3	ENST00000374694.3|FZD8|ENSG00000177283.8|frizzled class receptor 8
hg38_v1_chr22_-_50526130_50526185	0.0532042	GLI3	ENST00000535425.5|SCO2|ENSG00000284194.3|synthesis of cytochrome C oxidase 2	ENST00000638598.2|SCO2|ENSG00000284194.3|synthesis of cytochrome C oxidase 2
hg38_v1_chr16_-_18790260_18790308	0.0530771	GLI3	ENST00000565420.5|RPS15A|ENSG00000134419.15|ribosomal protein S15a
hg38_v1_chr11_-_119057185_119057211	0.0528138	GLI3	ENST00000614668.4|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1	ENST00000617285.5|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1
hg38_v1_chr6_+_30721573_30721589	0.0523071	GLI3	ENST00000330914.7|TUBB|ENSG00000196230.14|tubulin beta class I
hg38_v1_chr2_-_135876382_135876452	0.0521968	GLI3	ENST00000264156.3|MCM6|ENSG00000076003.5|minichromosome maintenance complex component 6
hg38_v1_chr1_+_167721954_167722152	0.0521077	GLI3	ENST00000359523.7|MPZL1|ENSG00000197965.12|myelin protein zero like 1	ENST00000392121.7|MPZL1|ENSG00000197965.12|myelin protein zero like 1	ENST00000474859.5|MPZL1|ENSG00000197965.12|myelin protein zero like 1
hg38_v1_chr15_-_49155574_49155661	0.0519362	GLI3	ENST00000558843.5|COPS2|ENSG00000166200.15|COP9 signalosome subunit 2	ENST00000388901.10|COPS2|ENSG00000166200.15|COP9 signalosome subunit 2	ENST00000542928.5|COPS2|ENSG00000166200.15|COP9 signalosome subunit 2	ENST00000561248.1|COPS2|ENSG00000166200.15|COP9 signalosome subunit 2	ENST00000299259.10|COPS2|ENSG00000166200.15|COP9 signalosome subunit 2
hg38_v1_chr17_-_10697501_10697555	0.0519261	GLI3	ENST00000577427.1|SCO1|ENSG00000133028.12|synthesis of cytochrome C oxidase 1	ENST00000255390.10|SCO1|ENSG00000133028.12|synthesis of cytochrome C oxidase 1
hg38_v1_chr4_-_95549199_95549222	0.0517541	GLI3	ENST00000504962.1|UNC5C|ENSG00000182168.15|unc-5 netrin receptor C	ENST00000506749.5|UNC5C|ENSG00000182168.15|unc-5 netrin receptor C
hg38_v1_chr7_+_99828010_99828116	0.0517473	GLI3	ENST00000631161.2|CYP3A43|ENSG00000021461.17|cytochrome P450 family 3 subfamily A member 43	ENST00000354829.7|CYP3A43|ENSG00000021461.17|cytochrome P450 family 3 subfamily A member 43	ENST00000342499.8|CYP3A43|ENSG00000021461.17|cytochrome P450 family 3 subfamily A member 43	ENST00000417625.5|CYP3A43|ENSG00000021461.17|cytochrome P450 family 3 subfamily A member 43	ENST00000415413.5|CYP3A43|ENSG00000021461.17|cytochrome P450 family 3 subfamily A member 43	ENST00000444905.5|CYP3A43|ENSG00000021461.17|cytochrome P450 family 3 subfamily A member 43	ENST00000222382.5|CYP3A43|ENSG00000021461.17|cytochrome P450 family 3 subfamily A member 43	ENST00000312017.9|CYP3A43|ENSG00000021461.17|cytochrome P450 family 3 subfamily A member 43
hg38_v1_chr19_+_18588789_18588813	0.0516097	GLI3	ENST00000450195.6|REX1BD|ENSG00000006015.18|required for excision 1-B domain containing	ENST00000358607.11|REX1BD|ENSG00000006015.18|required for excision 1-B domain containing
hg38_v1_chr14_+_95876385_95876397	0.0515069	GLI3	ENST00000504119.1|TUNAR|ENSG00000250366.3|TCL1 upstream neural differentiation-associated RNA
hg38_v1_chr11_-_119057105_119057157	0.0513232	GLI3	ENST00000534233.5|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1	ENST00000614711.4|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1	ENST00000530467.5|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1	ENST00000621959.4|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1	ENST00000532519.6|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1	ENST00000532421.5|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1	ENST00000610597.1|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1	ENST00000612687.4|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1
hg38_v1_chr17_+_82051865_82051958	0.0510334	GLI3	ENST00000578552.5|GPS1|ENSG00000169727.12|G protein pathway suppressor 1	ENST00000320548.8|GPS1|ENSG00000169727.12|G protein pathway suppressor 1	ENST00000624957.3|GPS1|ENSG00000169727.12|G protein pathway suppressor 1	ENST00000581578.5|GPS1|ENSG00000169727.12|G protein pathway suppressor 1	ENST00000583885.5|GPS1|ENSG00000169727.12|G protein pathway suppressor 1	ENST00000583641.5|GPS1|ENSG00000169727.12|G protein pathway suppressor 1	ENST00000623691.3|GPS1|ENSG00000169727.12|G protein pathway suppressor 1	ENST00000581418.5|GPS1|ENSG00000169727.12|G protein pathway suppressor 1	ENST00000306823.10|GPS1|ENSG00000169727.12|G protein pathway suppressor 1	ENST00000392358.6|GPS1|ENSG00000169727.12|G protein pathway suppressor 1
hg38_v1_chr20_-_41366805_41366825	0.0510168	GLI3	ENST00000332312.4|EMILIN3|ENSG00000183798.5|elastin microfibril interfacer 3
hg38_v1_chr9_+_136982993_136982993	0.0509667	GLI3	ENST00000408973.3|LCNL1|ENSG00000214402.7|lipocalin like 1
hg38_v1_chr22_+_37805218_37805236	0.0508061	GLI3	ENST00000340857.4|H1-0|ENSG00000189060.6|H1.0 linker histone
hg38_v1_chr20_-_22585451_22585459	0.0505942	GLI3	ENST00000377115.4|FOXA2|ENSG00000125798.15|forkhead box A2
hg38_v1_chrX_-_149587444_149587459	0.0505464	GLI3	ENST00000593349.5|MAGEA9B|ENSG00000267978.6|MAGE family member A9B	ENST00000602102.5|MAGEA9B|ENSG00000267978.6|MAGE family member A9B	ENST00000595065.6|MAGEA9B|ENSG00000267978.6|MAGE family member A9B
hg38_v1_chr16_-_89720861_89720948	0.0504442	GLI3	ENST00000389386.8|VPS9D1|ENSG00000075399.14|VPS9 domain containing 1
hg38_v1_chr19_+_37469337_37469396	0.0503035	GLI3	ENST00000330173.6|ZNF570|ENSG00000171827.11|zinc finger protein 570
hg38_v1_chr2_-_70820547_70820601	0.0502544	GLI3	ENST00000426626.1|CLEC4F|ENSG00000152672.8|C-type lectin domain family 4 member F	ENST00000272367.7|CLEC4F|ENSG00000152672.8|C-type lectin domain family 4 member F
hg38_v1_chr1_+_181088692_181088710	0.0502522	GLI3	ENST00000367577.7|IER5|ENSG00000162783.11|immediate early response 5
hg38_v1_chr19_-_58519554_58519626	0.0499596	GLI3	ENST00000354590.7|ZBTB45|ENSG00000119574.13|zinc finger and BTB domain containing 45	ENST00000596739.1|ZBTB45|ENSG00000119574.13|zinc finger and BTB domain containing 45
hg38_v1_chr17_-_7857854_7857882	0.0495616	GLI3	ENST00000333775.9|NAA38|ENSG00000183011.14|N-alpha-acetyltransferase 38, NatC auxiliary subunit
hg38_v1_chr11_+_1697195_1697195	0.0493635	GLI3	ENST00000382160.1|KRTAP5-6|ENSG00000205864.1|keratin associated protein 5-6
hg38_v1_chr5_+_126631680_126631726	0.0492597	GLI3	ENST00000357147.4|TEX43|ENSG00000196900.5|testis expressed 43
hg38_v1_chr16_-_75207152_75207189	0.0491097	GLI3	ENST00000303037.13|CTRB2|ENSG00000168928.13|chymotrypsinogen B2
hg38_v1_chr7_+_87934242_87934466	0.0489034	GLI3	ENST00000413139.2|ADAM22|ENSG00000008277.15|ADAM metallopeptidase domain 22	ENST00000412441.5|ADAM22|ENSG00000008277.15|ADAM metallopeptidase domain 22	ENST00000683525.1|ADAM22|ENSG00000008277.15|ADAM metallopeptidase domain 22	ENST00000398201.8|ADAM22|ENSG00000008277.15|ADAM metallopeptidase domain 22	ENST00000265727.11|ADAM22|ENSG00000008277.15|ADAM metallopeptidase domain 22	ENST00000398209.7|ADAM22|ENSG00000008277.15|ADAM metallopeptidase domain 22	ENST00000684002.1|ADAM22|ENSG00000008277.15|ADAM metallopeptidase domain 22
hg38_v1_chr22_+_20859483_20859500	0.0487347	GLI3	ENST00000439214.1|SNAP29|ENSG00000099940.12|synaptosome associated protein 29
hg38_v1_chr3_-_49719668_49719691	0.0487128	GLI3	ENST00000320431.8|AMIGO3|ENSG00000176020.9|adhesion molecule with Ig like domain 3
hg38_v1_chr9_+_40223317_40223402	0.0483948	GLI3	ENST00000611747.1|ANKRD20A2P|ENSG00000183148.7|ankyrin repeat domain 20 family member A2, pseudogene	ENST00000377601.3|ANKRD20A2P|ENSG00000183148.7|ankyrin repeat domain 20 family member A2, pseudogene	ENST00000654136.1|ENSG00000240240.9|ENSG00000240240.9|novel transcript	ENST00000659103.1|ENSG00000240240.9|ENSG00000240240.9|novel transcript
hg38_v1_chr5_-_59276109_59276124	0.0481627	GLI3	ENST00000503258.5|PDE4D|ENSG00000113448.19|phosphodiesterase 4D
hg38_v1_chr15_-_40755223_40755336	0.048021	GLI3	ENST00000560460.5|RMDN3|ENSG00000137824.16|regulator of microtubule dynamics 3	ENST00000338376.8|RMDN3|ENSG00000137824.16|regulator of microtubule dynamics 3	ENST00000560905.1|RMDN3|ENSG00000137824.16|regulator of microtubule dynamics 3
hg38_v1_chr16_-_20806431_20806493	0.0477895	GLI3	ENST00000357967.9|ERI2|ENSG00000196678.14|ERI1 exoribonuclease family member 2	ENST00000300005.7|ERI2|ENSG00000196678.14|ERI1 exoribonuclease family member 2	ENST00000569729.5|ERI2|ENSG00000196678.14|ERI1 exoribonuclease family member 2
hg38_v1_chr19_-_48617797_48617888	0.0477808	GLI3	ENST00000546623.5|RPL18|ENSG00000063177.13|ribosomal protein L18	ENST00000084795.9|RPL18|ENSG00000063177.13|ribosomal protein L18
hg38_v1_chr2_+_106487349_106487413	0.0477447	GLI3	ENST00000643224.2|CD8B2|ENSG00000254126.8|CD8b2 molecule	ENST00000416057.2|CD8B2|ENSG00000254126.8|CD8b2 molecule
hg38_v1_chr17_-_50372903_50372960	0.0477195	GLI3	ENST00000507088.5|MRPL27|ENSG00000108826.16|mitochondrial ribosomal protein L27
hg38_v1_chr7_-_108526061_108526318	0.0467553	GLI3	ENST00000426128.6|PNPLA8|ENSG00000135241.17|patatin like phospholipase domain containing 8	ENST00000427008.1|PNPLA8|ENSG00000135241.17|patatin like phospholipase domain containing 8	ENST00000257694.13|PNPLA8|ENSG00000135241.17|patatin like phospholipase domain containing 8	ENST00000422087.5|PNPLA8|ENSG00000135241.17|patatin like phospholipase domain containing 8	ENST00000453144.5|PNPLA8|ENSG00000135241.17|patatin like phospholipase domain containing 8	ENST00000436062.5|PNPLA8|ENSG00000135241.17|patatin like phospholipase domain containing 8
hg38_v1_chr18_+_24014390_24014452	0.0467489	GLI3	ENST00000584250.1|TTC39C|ENSG00000168234.13|tetratricopeptide repeat domain 39C
hg38_v1_chrX_+_141896235_141896235	0.0466649	GLI3	ENST00000409007.1|MAGEC3|ENSG00000165509.13|MAGE family member C3
hg38_v1_chr17_-_7857139_7857268	0.0466537	GLI3	ENST00000576384.1|NAA38|ENSG00000183011.14|N-alpha-acetyltransferase 38, NatC auxiliary subunit
hg38_v1_chr8_-_58659534_58659590	0.0466126	GLI3	ENST00000427130.6|NSMAF|ENSG00000035681.9|neutral sphingomyelinase activation associated factor
hg38_v1_chr2_+_233729042_233729042	0.0465074	GLI3	ENST00000482026.6|UGT1A3|ENSG00000288702.1|UDP glucuronosyltransferase family 1 member A3
hg38_v1_chr16_+_88382950_88382965	0.0461686	GLI3	ENST00000565624.3|ZNF469|ENSG00000225614.4|zinc finger protein 469
hg38_v1_chr16_-_2268054_2268103	0.0459094	GLI3	ENST00000561518.5|RNPS1|ENSG00000205937.12|RNA binding protein with serine rich domain 1	ENST00000561718.5|RNPS1|ENSG00000205937.12|RNA binding protein with serine rich domain 1	ENST00000567147.5|RNPS1|ENSG00000205937.12|RNA binding protein with serine rich domain 1	ENST00000562690.5|RNPS1|ENSG00000205937.12|RNA binding protein with serine rich domain 1	ENST00000569598.6|RNPS1|ENSG00000205937.12|RNA binding protein with serine rich domain 1
hg38_v1_chr22_+_22887780_22887844	0.0454346	GLI3	ENST00000532223.2|IGLL5|ENSG00000254709.8|immunoglobulin lambda like polypeptide 5	ENST00000526893.6|IGLL5|ENSG00000254709.8|immunoglobulin lambda like polypeptide 5	ENST00000531372.1|IGLL5|ENSG00000254709.8|immunoglobulin lambda like polypeptide 5
hg38_v1_chr1_+_22052627_22052722	0.0454235	GLI3	ENST00000400259.5|CDC42|ENSG00000070831.17|cell division cycle 42	ENST00000344548.7|CDC42|ENSG00000070831.17|cell division cycle 42	ENST00000315554.13|CDC42|ENSG00000070831.17|cell division cycle 42	ENST00000656825.1|CDC42|ENSG00000070831.17|cell division cycle 42	ENST00000651171.1|CDC42|ENSG00000070831.17|cell division cycle 42	ENST00000652582.1|CDC42|ENSG00000070831.17|cell division cycle 42	ENST00000667384.1|CDC42|ENSG00000070831.17|cell division cycle 42
hg38_v1_chr3_-_52239082_52239165	0.0453823	GLI3	ENST00000499914.2|TWF2|ENSG00000247596.10|twinfilin actin binding protein 2	ENST00000678838.1|TWF2|ENSG00000247596.10|twinfilin actin binding protein 2	ENST00000305533.10|TWF2|ENSG00000247596.10|twinfilin actin binding protein 2	ENST00000678330.1|TWF2|ENSG00000247596.10|twinfilin actin binding protein 2
hg38_v1_chr22_+_42553862_42553966	0.0450582	GLI3	ENST00000340239.8|SERHL2|ENSG00000183569.18|serine hydrolase like 2	ENST00000327678.10|SERHL2|ENSG00000183569.18|serine hydrolase like 2
hg38_v1_chr2_+_237859615_237859632	0.0449791	GLI3	ENST00000409726.5|RAMP1|ENSG00000132329.11|receptor activity modifying protein 1	ENST00000254661.5|RAMP1|ENSG00000132329.11|receptor activity modifying protein 1
hg38_v1_chr16_+_84648502_84648612	0.0447646	GLI3	ENST00000564996.6|KLHL36|ENSG00000135686.13|kelch like family member 36	ENST00000258157.9|KLHL36|ENSG00000135686.13|kelch like family member 36	ENST00000567410.5|KLHL36|ENSG00000135686.13|kelch like family member 36
hg38_v1_chr2_+_24793098_24793171	0.0444629	GLI3	ENST00000473706.5|CENPO|ENSG00000138092.11|centromere protein O
hg38_v1_chr8_-_22133356_22133395	0.044298	GLI3	ENST00000680789.1|HR|ENSG00000168453.16|HR lysine demethylase and nuclear receptor corepressor
hg38_v1_chr16_+_86578543_86578555	0.04389	GLI3	ENST00000320241.5|FOXL1|ENSG00000176678.6|forkhead box L1
hg38_v1_chrX_-_64976500_64976533	0.0438589	GLI3	ENST00000447788.6|ZC4H2|ENSG00000126970.16|zinc finger C4H2-type containing
hg38_v1_chr11_+_46332905_46332937	0.0438075	GLI3	ENST00000343674.10|DGKZ|ENSG00000149091.15|diacylglycerol kinase zeta
hg38_v1_chr1_+_161226045_161226075	0.0437537	GLI3	ENST00000367988.8|TOMM40L|ENSG00000158882.15|translocase of outer mitochondrial membrane 40 like
hg38_v1_chr19_+_5455409_5455435	0.0436913	GLI3	ENST00000222033.6|ZNRF4|ENSG00000105428.6|zinc and ring finger 4
hg38_v1_chr12_-_81758665_81758694	0.0436571	GLI3	ENST00000549325.5|PPFIA2|ENSG00000139220.17|PTPRF interacting protein alpha 2	ENST00000550584.6|PPFIA2|ENSG00000139220.17|PTPRF interacting protein alpha 2
hg38_v1_chr6_+_110958680_110958718	0.0435702	GLI3	ENST00000329970.8|GTF3C6|ENSG00000155115.7|general transcription factor IIIC subunit 6
hg38_v1_chr11_-_36289408_36289449	0.0435429	GLI3	ENST00000263401.10|COMMD9|ENSG00000110442.12|COMM domain containing 9	ENST00000532705.1|COMMD9|ENSG00000110442.12|COMM domain containing 9	ENST00000452374.6|COMMD9|ENSG00000110442.12|COMM domain containing 9
hg38_v1_chr13_-_113449128_113449277	0.0433972	GLI3	ENST00000356501.8|ADPRHL1|ENSG00000153531.14|ADP-ribosylhydrolase like 1	ENST00000413169.2|ADPRHL1|ENSG00000153531.14|ADP-ribosylhydrolase like 1
hg38_v1_chr1_+_1280436_1280436	0.0433184	GLI3	ENST00000379116.10|SCNN1D|ENSG00000162572.21|sodium channel epithelial 1 subunit delta
hg38_v1_chr2_+_238138661_238138694	0.0428037	GLI3	ENST00000409223.2|KLHL30|ENSG00000168427.9|kelch like family member 30
hg38_v1_chrX_-_152753840_152753884	0.0425257	GLI3	ENST00000617505.1|MAGEA2|ENSG00000268606.6|MAGE family member A2	ENST00000684311.1|MAGEA2|ENSG00000268606.6|MAGE family member A2	ENST00000617846.4|MAGEA2|ENSG00000268606.6|MAGE family member A2	ENST00000595583.5|MAGEA2|ENSG00000268606.6|MAGE family member A2	ENST00000620710.4|MAGEA2|ENSG00000268606.6|MAGE family member A2	ENST00000611557.4|MAGEA2|ENSG00000268606.6|MAGE family member A2	ENST00000623806.3|MAGEA2|ENSG00000268606.6|MAGE family member A2	ENST00000623438.3|MAGEA2|ENSG00000268606.6|MAGE family member A2	ENST00000598543.5|MAGEA2|ENSG00000268606.6|MAGE family member A2	ENST00000611674.4|MAGEA2|ENSG00000268606.6|MAGE family member A2
hg38_v1_chr7_+_29194757_29194848	0.0418907	GLI3	ENST00000222792.11|CHN2|ENSG00000106069.23|chimerin 2
hg38_v1_chr5_+_80960694_80960739	0.0418075	GLI3	ENST00000638442.1|RASGRF2|ENSG00000113319.13|Ras protein specific guanine nucleotide releasing factor 2
hg38_v1_chr19_-_4182527_4182576	0.041699	GLI3	ENST00000601571.1|SIRT6|ENSG00000077463.15|sirtuin 6	ENST00000601488.5|SIRT6|ENSG00000077463.15|sirtuin 6	ENST00000305232.10|SIRT6|ENSG00000077463.15|sirtuin 6	ENST00000337491.7|SIRT6|ENSG00000077463.15|sirtuin 6
hg38_v1_chr11_+_60429567_60429576	0.041566	GLI3	ENST00000300190.7|MS4A5|ENSG00000166930.7|membrane spanning 4-domains A5
hg38_v1_chr7_+_130381092_130381107	0.0414167	GLI3	ENST00000484324.1|CPA1|ENSG00000091704.10|carboxypeptidase A1
hg38_v1_chr22_+_31496139_31496168	0.0413408	GLI3	ENST00000540643.5|SFI1|ENSG00000198089.16|SFI1 centrin binding protein
hg38_v1_chr19_+_54874275_54874290	0.0411775	GLI3	ENST00000469767.5|FCAR|ENSG00000186431.19|Fc fragment of IgA receptor	ENST00000391725.7|FCAR|ENSG00000186431.19|Fc fragment of IgA receptor	ENST00000345937.8|FCAR|ENSG00000186431.19|Fc fragment of IgA receptor	ENST00000353758.8|FCAR|ENSG00000186431.19|Fc fragment of IgA receptor	ENST00000359272.8|FCAR|ENSG00000186431.19|Fc fragment of IgA receptor	ENST00000391723.7|FCAR|ENSG00000186431.19|Fc fragment of IgA receptor	ENST00000391724.3|FCAR|ENSG00000186431.19|Fc fragment of IgA receptor
hg38_v1_chr13_+_27251569_27251604	0.0410227	GLI3	ENST00000272274.8|RPL21|ENSG00000122026.11|ribosomal protein L21	ENST00000319826.8|RPL21|ENSG00000122026.11|ribosomal protein L21	ENST00000326092.8|RPL21|ENSG00000122026.11|ribosomal protein L21
hg38_v1_chr17_+_7420315_7420339	0.0408267	GLI3	ENST00000323675.4|SPEM1|ENSG00000181323.8|spermatid maturation 1
hg38_v1_chr8_+_96645221_96645272	0.0404002	GLI3	ENST00000220763.10|CPQ|ENSG00000104324.16|carboxypeptidase Q
hg38_v1_chr1_+_149477960_149477960	0.0400937	GLI3	ENST00000369227.7|NBPF19|ENSG00000271383.8|NBPF member 19
hg38_v1_chr11_+_30231000_30231018	0.0398089	GLI3	ENST00000254122.8|FSHB|ENSG00000131808.11|follicle stimulating hormone subunit beta	ENST00000533718.2|FSHB|ENSG00000131808.11|follicle stimulating hormone subunit beta	ENST00000417547.1|FSHB|ENSG00000131808.11|follicle stimulating hormone subunit beta
hg38_v1_chr6_+_29657120_29657210	0.0397177	GLI3	ENST00000396704.7|MOG|ENSG00000204655.12|myelin oligodendrocyte glycoprotein	ENST00000416766.6|MOG|ENSG00000204655.12|myelin oligodendrocyte glycoprotein	ENST00000483013.5|MOG|ENSG00000204655.12|myelin oligodendrocyte glycoprotein	ENST00000490427.5|MOG|ENSG00000204655.12|myelin oligodendrocyte glycoprotein	ENST00000376891.8|MOG|ENSG00000204655.12|myelin oligodendrocyte glycoprotein	ENST00000376898.7|MOG|ENSG00000204655.12|myelin oligodendrocyte glycoprotein	ENST00000396701.6|MOG|ENSG00000204655.12|myelin oligodendrocyte glycoprotein	ENST00000494692.5|MOG|ENSG00000204655.12|myelin oligodendrocyte glycoprotein	ENST00000431798.6|MOG|ENSG00000204655.12|myelin oligodendrocyte glycoprotein
hg38_v1_chr14_-_20587716_20587731	0.0396998	GLI3	ENST00000553849.1|RNASE11|ENSG00000173464.14|ribonuclease A family member 11 (inactive)
hg38_v1_chr7_-_96709780_96709854	0.0396197	GLI3	ENST00000623693.3|SEM1|ENSG00000127922.9|SEM1 26S proteasome complex subunit	ENST00000623498.3|SEM1|ENSG00000127922.9|SEM1 26S proteasome complex subunit	ENST00000488005.5|SEM1|ENSG00000127922.9|SEM1 26S proteasome complex subunit	ENST00000413065.5|SEM1|ENSG00000127922.9|SEM1 26S proteasome complex subunit
hg38_v1_chr6_-_116279837_116279964	0.0394067	GLI3	ENST00000368608.4|TSPYL1|ENSG00000189241.8|TSPY like 1
hg38_v1_chr2_+_216499068_216499140	0.0393007	GLI3	ENST00000456586.5|RPL37A|ENSG00000197756.10|ribosomal protein L37a	ENST00000427280.6|RPL37A|ENSG00000197756.10|ribosomal protein L37a	ENST00000598925.5|RPL37A|ENSG00000197756.10|ribosomal protein L37a	ENST00000441179.2|RPL37A|ENSG00000197756.10|ribosomal protein L37a
hg38_v1_chr16_-_75265925_75266022	0.0392025	GLI3	ENST00000535626.6|BCAR1|ENSG00000050820.17|BCAR1 scaffold protein, Cas family member	ENST00000538440.6|BCAR1|ENSG00000050820.17|BCAR1 scaffold protein, Cas family member	ENST00000418647.7|BCAR1|ENSG00000050820.17|BCAR1 scaffold protein, Cas family member
hg38_v1_chr18_-_77132771_77132844	0.0390653	GLI3	ENST00000355994.7|MBP|ENSG00000197971.16|myelin basic protein	ENST00000579129.5|MBP|ENSG00000197971.16|myelin basic protein
hg38_v1_chr19_+_44955365_44955400	0.0388166	GLI3	ENST00000337392.10|CLPTM1|ENSG00000104853.16|CLPTM1 regulator of GABA type A receptor forward trafficking	ENST00000591304.1|CLPTM1|ENSG00000104853.16|CLPTM1 regulator of GABA type A receptor forward trafficking
hg38_v1_chr10_+_102644990_102645154	0.0387301	GLI3	ENST00000645961.1|TRIM8|ENSG00000171206.15|tripartite motif containing 8
hg38_v1_chr19_+_35143237_35143301	0.0386468	GLI3	ENST00000586063.5|FXYD7|ENSG00000221946.8|FXYD domain containing ion transport regulator 7	ENST00000270310.7|FXYD7|ENSG00000221946.8|FXYD domain containing ion transport regulator 7	ENST00000588265.1|FXYD7|ENSG00000221946.8|FXYD domain containing ion transport regulator 7
hg38_v1_chr16_+_31713231_31713310	0.0380284	GLI3	ENST00000539915.5|ZNF720|ENSG00000197302.10|zinc finger protein 720	ENST00000316491.13|ZNF720|ENSG00000197302.10|zinc finger protein 720	ENST00000398696.3|ZNF720|ENSG00000197302.10|zinc finger protein 720	ENST00000534369.1|ZNF720|ENSG00000197302.10|zinc finger protein 720	ENST00000530881.5|ZNF720|ENSG00000197302.10|zinc finger protein 720	ENST00000529515.1|ZNF720|ENSG00000197302.10|zinc finger protein 720
hg38_v1_chr12_-_6753134_6753147	0.0379618	GLI3	ENST00000203630.10|MLF2|ENSG00000089693.11|myeloid leukemia factor 2
hg38_v1_chr2_+_69742125_69742141	0.0378543	GLI3	ENST00000394295.6|ANXA4|ENSG00000196975.16|annexin A4
hg38_v1_chr9_-_127762416_127762457	0.0375993	GLI3	ENST00000440630.5|SH2D3C|ENSG00000095370.20|SH2 domain containing 3C	ENST00000429553.5|SH2D3C|ENSG00000095370.20|SH2 domain containing 3C
hg38_v1_chr12_-_112409550_112409653	0.0375131	GLI3	ENST00000550566.6|RPL6|ENSG00000089009.16|ribosomal protein L6	ENST00000553213.2|RPL6|ENSG00000089009.16|ribosomal protein L6	ENST00000424576.6|RPL6|ENSG00000089009.16|ribosomal protein L6	ENST00000202773.14|RPL6|ENSG00000089009.16|ribosomal protein L6
hg38_v1_chr16_+_19555694_19555731	0.0374567	GLI3	ENST00000417362.7|VPS35L|ENSG00000103544.15|VPS35 endosomal protein sorting factor like	ENST00000567245.5|VPS35L|ENSG00000103544.15|VPS35 endosomal protein sorting factor like	ENST00000513947.8|VPS35L|ENSG00000103544.15|VPS35 endosomal protein sorting factor like
hg38_v1_chr19_-_50833187_50833187	0.037445	GLI3	ENST00000598673.1|KLK15|ENSG00000174562.13|kallikrein related peptidase 15
hg38_v1_chr3_+_35639515_35639531	0.0369407	GLI3	ENST00000684406.1|ARPP21|ENSG00000172995.17|cAMP regulated phosphoprotein 21
hg38_v1_chr3_+_100260983_100261028	0.0368964	GLI3	ENST00000394144.9|TBC1D23|ENSG00000036054.13|TBC1 domain family member 23	ENST00000485687.5|TBC1D23|ENSG00000036054.13|TBC1 domain family member 23	ENST00000344949.9|TBC1D23|ENSG00000036054.13|TBC1 domain family member 23
hg38_v1_chr1_-_43367689_43367738	0.0367674	GLI3	ENST00000621943.4|ELOVL1|ENSG00000066322.15|ELOVL fatty acid elongase 1
hg38_v1_chr11_-_30586272_30586320	0.0367152	GLI3	ENST00000448418.6|MPPED2|ENSG00000066382.17|metallophosphoesterase domain containing 2
hg38_v1_chr11_+_90134634_90134738	0.036691	GLI3	ENST00000534061.6|NAALAD2|ENSG00000077616.11|N-acetylated alpha-linked acidic dipeptidase 2	ENST00000321955.8|NAALAD2|ENSG00000077616.11|N-acetylated alpha-linked acidic dipeptidase 2	ENST00000525171.5|NAALAD2|ENSG00000077616.11|N-acetylated alpha-linked acidic dipeptidase 2	ENST00000375944.7|NAALAD2|ENSG00000077616.11|N-acetylated alpha-linked acidic dipeptidase 2
hg38_v1_chr17_-_7857461_7857578	0.0364987	GLI3	ENST00000575771.6|NAA38|ENSG00000183011.14|N-alpha-acetyltransferase 38, NatC auxiliary subunit	ENST00000575071.5|NAA38|ENSG00000183011.14|N-alpha-acetyltransferase 38, NatC auxiliary subunit
hg38_v1_chr3_+_47380995_47381072	0.0361725	GLI3	ENST00000456221.5|PTPN23|ENSG00000076201.16|protein tyrosine phosphatase non-receptor type 23	ENST00000265562.5|PTPN23|ENSG00000076201.16|protein tyrosine phosphatase non-receptor type 23
hg38_v1_chr16_-_2787550_2787567	0.0361515	GLI3	ENST00000682474.1|PRSS33|ENSG00000103355.14|serine protease 33
hg38_v1_chr20_+_64036175_64036189	0.0358705	GLI3	ENST00000636176.2|C20orf204|ENSG00000196421.9|chromosome 20 open reading frame 204
hg38_v1_chr9_-_113299196_113299196	0.0358268	GLI3	ENST00000441031.3|RNF183|ENSG00000165188.14|ring finger protein 183
hg38_v1_chr1_+_180912876_180912920	0.0356899	GLI3	ENST00000367588.9|KIAA1614|ENSG00000135835.12|KIAA1614
hg38_v1_chr22_+_24555981_24556012	0.0356522	GLI3	ENST00000215829.8|SNRPD3|ENSG00000100028.12|small nuclear ribonucleoprotein D3 polypeptide	ENST00000402849.5|SNRPD3|ENSG00000100028.12|small nuclear ribonucleoprotein D3 polypeptide
hg38_v1_chr13_+_114281577_114281645	0.0354918	GLI3	ENST00000375299.8|UPF3A|ENSG00000169062.15|UPF3A regulator of nonsense mediated mRNA decay	ENST00000492270.1|UPF3A|ENSG00000169062.15|UPF3A regulator of nonsense mediated mRNA decay	ENST00000351487.5|UPF3A|ENSG00000169062.15|UPF3A regulator of nonsense mediated mRNA decay
hg38_v1_chr16_+_50693568_50693635	0.0353975	GLI3	ENST00000647318.2|NOD2|ENSG00000167207.14|nucleotide binding oligomerization domain containing 2	ENST00000531674.1|NOD2|ENSG00000167207.14|nucleotide binding oligomerization domain containing 2
hg38_v1_chr9_-_129642094_129642171	0.0353875	GLI3	ENST00000277459.8|ASB6|ENSG00000148331.12|ankyrin repeat and SOCS box containing 6	ENST00000277458.5|ASB6|ENSG00000148331.12|ankyrin repeat and SOCS box containing 6	ENST00000450050.6|ASB6|ENSG00000148331.12|ankyrin repeat and SOCS box containing 6
hg38_v1_chr2_+_230878139_230878218	0.0352829	GLI3	ENST00000620962.1|ITM2C|ENSG00000135916.16|integral membrane protein 2C
hg38_v1_chr4_+_70195719_70195737	0.0352518	GLI3	ENST00000683306.1|ODAM|ENSG00000109205.17|odontogenic, ameloblast associated
hg38_v1_chr2_-_39121000_39121072	0.0350396	GLI3	ENST00000402219.8|SOS1|ENSG00000115904.14|SOS Ras/Rac guanine nucleotide exchange factor 1
hg38_v1_chr19_+_9835292_9835346	0.0346773	GLI3	ENST00000247970.9|PIN1|ENSG00000127445.14|peptidylprolyl cis/trans isomerase, NIMA-interacting 1	ENST00000587625.5|PIN1|ENSG00000127445.14|peptidylprolyl cis/trans isomerase, NIMA-interacting 1	ENST00000588695.5|PIN1|ENSG00000127445.14|peptidylprolyl cis/trans isomerase, NIMA-interacting 1
hg38_v1_chrX_-_64976435_64976458	0.0345974	GLI3	ENST00000374839.8|ZC4H2|ENSG00000126970.16|zinc finger C4H2-type containing
hg38_v1_chr1_-_18859682_18859682	0.0343285	GLI3	ENST00000375371.3|TAS1R2|ENSG00000179002.5|taste 1 receptor member 2
hg38_v1_chr19_-_54339146_54339177	0.0341911	GLI3	ENST00000291759.5|LILRA4|ENSG00000239961.3|leukocyte immunoglobulin like receptor A4
hg38_v1_chr19_+_58476156_58476362	0.0335667	GLI3	ENST00000600013.5|ZNF446|ENSG00000083838.16|zinc finger protein 446	ENST00000594369.6|ZNF446|ENSG00000083838.16|zinc finger protein 446
hg38_v1_chr17_+_6070361_6070412	0.0331648	GLI3	ENST00000317744.10|WSCD1|ENSG00000179314.15|WSC domain containing 1
hg38_v1_chr16_-_28491996_28492088	0.0328815	GLI3	ENST00000568497.6|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin	ENST00000357857.14|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin	ENST00000395653.9|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin	ENST00000635973.1|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin	ENST00000568443.2|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin	ENST00000568558.6|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin	ENST00000565688.5|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin	ENST00000637100.1|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin	ENST00000359984.12|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin	ENST00000636147.2|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin	ENST00000567963.6|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin
hg38_v1_chr8_+_26291758_26291982	0.0325963	GLI3	ENST00000522535.5|PPP2R2A|ENSG00000221914.11|protein phosphatase 2 regulatory subunit Balpha	ENST00000665949.1|PPP2R2A|ENSG00000221914.11|protein phosphatase 2 regulatory subunit Balpha
hg38_v1_chr19_-_54189550_54189640	0.0325465	GLI3	ENST00000338624.10|MBOAT7|ENSG00000125505.17|membrane bound O-acyltransferase domain containing 7	ENST00000245615.6|MBOAT7|ENSG00000125505.17|membrane bound O-acyltransferase domain containing 7
hg38_v1_chrX_+_11758159_11758268	0.0322514	GLI3	ENST00000361672.6|MSL3|ENSG00000005302.19|MSL complex subunit 3	ENST00000337339.7|MSL3|ENSG00000005302.19|MSL complex subunit 3	ENST00000647869.1|MSL3|ENSG00000005302.19|MSL complex subunit 3	ENST00000312196.10|MSL3|ENSG00000005302.19|MSL complex subunit 3	ENST00000647857.1|MSL3|ENSG00000005302.19|MSL complex subunit 3	ENST00000649130.1|MSL3|ENSG00000005302.19|MSL complex subunit 3
hg38_v1_chr14_+_103928432_103928483	0.0321732	GLI3	ENST00000409874.9|TDRD9|ENSG00000156414.19|tudor domain containing 9
hg38_v1_chr17_-_81653693_81653737	0.0321715	GLI3	ENST00000571004.1|PDE6G|ENSG00000185527.12|phosphodiesterase 6G
hg38_v1_chrX_+_2828921_2828965	0.032018	GLI3	ENST00000398806.8|GYG2|ENSG00000056998.20|glycogenin 2
hg38_v1_chr16_+_85027761_85027824	0.0317398	GLI3	ENST00000683363.1|KIAA0513|ENSG00000135709.13|KIAA0513
hg38_v1_chr5_+_7396099_7396254	0.0314231	GLI3	ENST00000338316.9|ADCY2|ENSG00000078295.17|adenylate cyclase 2
hg38_v1_chr1_+_161225939_161226005	0.0314108	GLI3	ENST00000545897.5|TOMM40L|ENSG00000158882.15|translocase of outer mitochondrial membrane 40 like
hg38_v1_chr17_-_48430205_48430246	0.0313349	GLI3	ENST00000336915.11|SKAP1|ENSG00000141293.16|src kinase associated phosphoprotein 1	ENST00000584924.5|SKAP1|ENSG00000141293.16|src kinase associated phosphoprotein 1
hg38_v1_chr5_+_154858594_154858688	0.0312888	GLI3	ENST00000519430.5|CNOT8|ENSG00000155508.14|CCR4-NOT transcription complex subunit 8	ENST00000520671.5|CNOT8|ENSG00000155508.14|CCR4-NOT transcription complex subunit 8	ENST00000521583.5|CNOT8|ENSG00000155508.14|CCR4-NOT transcription complex subunit 8	ENST00000285896.11|CNOT8|ENSG00000155508.14|CCR4-NOT transcription complex subunit 8	ENST00000518028.5|CNOT8|ENSG00000155508.14|CCR4-NOT transcription complex subunit 8	ENST00000519404.5|CNOT8|ENSG00000155508.14|CCR4-NOT transcription complex subunit 8	ENST00000519394.5|CNOT8|ENSG00000155508.14|CCR4-NOT transcription complex subunit 8	ENST00000518775.5|CNOT8|ENSG00000155508.14|CCR4-NOT transcription complex subunit 8
hg38_v1_chrX_-_49233309_49233371	0.0309913	GLI3	ENST00000376251.5|CACNA1F|ENSG00000102001.13|calcium voltage-gated channel subunit alpha1 F	ENST00000323022.10|CACNA1F|ENSG00000102001.13|calcium voltage-gated channel subunit alpha1 F	ENST00000376265.2|CACNA1F|ENSG00000102001.13|calcium voltage-gated channel subunit alpha1 F
hg38_v1_chr12_+_64610458_64610505	0.0306645	GLI3	ENST00000542104.6|RASSF3|ENSG00000153179.13|Ras association domain family member 3
hg38_v1_chr18_-_48950960_48950967	0.0294874	GLI3	ENST00000262158.8|SMAD7|ENSG00000101665.10|SMAD family member 7
hg38_v1_chr8_+_109362453_109362531	0.0290381	GLI3	ENST00000378402.10|PKHD1L1|ENSG00000205038.12|PKHD1 like 1
hg38_v1_chr22_+_31496275_31496293	0.0288	GLI3	ENST00000432498.5|SFI1|ENSG00000198089.16|SFI1 centrin binding protein
hg38_v1_chr19_+_40627033_40627259	0.028689	GLI3	ENST00000599225.1|LTBP4|ENSG00000090006.18|latent transforming growth factor beta binding protein 4	ENST00000598166.2|LTBP4|ENSG00000090006.18|latent transforming growth factor beta binding protein 4
hg38_v1_chr3_+_170418856_170418875	0.0285845	GLI3	ENST00000064724.8|CLDN11|ENSG00000013297.12|claudin 11	ENST00000486975.1|ENSG00000285218.1|ENSG00000285218.1|novel protein
hg38_v1_chr6_-_26032091_26032109	0.028279	GLI3	ENST00000621411.3|H3C2|ENSG00000286522.2|H3 clustered histone 2
hg38_v1_chr22_-_31292445_31292534	0.028184	GLI3	ENST00000402249.7|PIK3IP1|ENSG00000100100.13|phosphoinositide-3-kinase interacting protein 1	ENST00000215912.10|PIK3IP1|ENSG00000100100.13|phosphoinositide-3-kinase interacting protein 1	ENST00000443175.1|PIK3IP1|ENSG00000100100.13|phosphoinositide-3-kinase interacting protein 1	ENST00000441972.5|PIK3IP1|ENSG00000100100.13|phosphoinositide-3-kinase interacting protein 1
hg38_v1_chr14_-_19434341_19434341	0.0277568	GLI3	ENST00000547848.5|POTEG|ENSG00000187537.13|POTE ankyrin domain family member G
hg38_v1_chr22_+_50486784_50486831	0.0276793	GLI3	ENST00000395733.7|MIOX|ENSG00000100253.13|myo-inositol oxygenase
hg38_v1_chr14_-_50830641_50830708	0.027395	GLI3	ENST00000453196.6|NIN|ENSG00000100503.26|ninein	ENST00000496749.1|NIN|ENSG00000100503.26|ninein
hg38_v1_chr6_+_27388748_27388777	0.0271596	GLI3	ENST00000244576.9|ZNF391|ENSG00000124613.9|zinc finger protein 391
hg38_v1_chr3_+_11272413_11272437	0.0269814	GLI3	ENST00000446450.6|ATG7|ENSG00000197548.12|autophagy related 7	ENST00000354956.9|ATG7|ENSG00000197548.12|autophagy related 7	ENST00000354449.7|ATG7|ENSG00000197548.12|autophagy related 7	ENST00000419112.5|ATG7|ENSG00000197548.12|autophagy related 7
hg38_v1_chr15_+_45252228_45252253	0.026843	GLI3	ENST00000560438.5|SLC28A2|ENSG00000137860.12|solute carrier family 28 member 2	ENST00000347644.8|SLC28A2|ENSG00000137860.12|solute carrier family 28 member 2
hg38_v1_chr17_+_77373085_77373190	0.0268165	GLI3	ENST00000423034.6|SEPTIN9|ENSG00000184640.20|septin 9
hg38_v1_chr1_+_28328994_28329118	0.0267993	GLI3	ENST00000373842.9|MED18|ENSG00000130772.14|mediator complex subunit 18	ENST00000398997.2|MED18|ENSG00000130772.14|mediator complex subunit 18
hg38_v1_chr15_-_65286837_65286917	0.0263442	GLI3	ENST00000444347.2|PARP16|ENSG00000138617.16|poly(ADP-ribose) polymerase family member 16	ENST00000261888.10|PARP16|ENSG00000138617.16|poly(ADP-ribose) polymerase family member 16	ENST00000649807.2|PARP16|ENSG00000138617.16|poly(ADP-ribose) polymerase family member 16
hg38_v1_chr11_+_68460712_68460813	0.0262187	GLI3	ENST00000528635.5|PPP6R3|ENSG00000110075.15|protein phosphatase 6 regulatory subunit 3	ENST00000533127.5|PPP6R3|ENSG00000110075.15|protein phosphatase 6 regulatory subunit 3	ENST00000529907.5|PPP6R3|ENSG00000110075.15|protein phosphatase 6 regulatory subunit 3	ENST00000529344.5|PPP6R3|ENSG00000110075.15|protein phosphatase 6 regulatory subunit 3	ENST00000534534.5|PPP6R3|ENSG00000110075.15|protein phosphatase 6 regulatory subunit 3	ENST00000524845.5|PPP6R3|ENSG00000110075.15|protein phosphatase 6 regulatory subunit 3	ENST00000393800.7|PPP6R3|ENSG00000110075.15|protein phosphatase 6 regulatory subunit 3	ENST00000265637.8|PPP6R3|ENSG00000110075.15|protein phosphatase 6 regulatory subunit 3	ENST00000524904.5|PPP6R3|ENSG00000110075.15|protein phosphatase 6 regulatory subunit 3	ENST00000393801.7|PPP6R3|ENSG00000110075.15|protein phosphatase 6 regulatory subunit 3	ENST00000265636.9|PPP6R3|ENSG00000110075.15|protein phosphatase 6 regulatory subunit 3	ENST00000529710.5|PPP6R3|ENSG00000110075.15|protein phosphatase 6 regulatory subunit 3
hg38_v1_chr9_+_21440437_21440439	0.0258388	GLI3	ENST00000276927.3|IFNA1|ENSG00000197919.6|interferon alpha 1
hg38_v1_chr19_+_43716070_43716088	0.0255579	GLI3	ENST00000244314.6|IRGC|ENSG00000124449.7|immunity related GTPase cinema
hg38_v1_chrX_+_152714586_152714685	0.0255297	GLI3	ENST00000331220.6|MAGEA2B|ENSG00000183305.14|MAGE family member A2B	ENST00000370293.6|MAGEA2B|ENSG00000183305.14|MAGE family member A2B	ENST00000423993.5|MAGEA2B|ENSG00000183305.14|MAGE family member A2B	ENST00000447530.5|MAGEA2B|ENSG00000183305.14|MAGE family member A2B	ENST00000682532.1|MAGEA2B|ENSG00000183305.14|MAGE family member A2B	ENST00000458057.5|MAGEA2B|ENSG00000183305.14|MAGE family member A2B	ENST00000422085.5|MAGEA2B|ENSG00000183305.14|MAGE family member A2B	ENST00000453150.5|MAGEA2B|ENSG00000183305.14|MAGE family member A2B	ENST00000409560.1|MAGEA2B|ENSG00000183305.14|MAGE family member A2B
hg38_v1_chr8_+_132919403_132919440	0.0254997	GLI3	ENST00000519178.5|TG|ENSG00000042832.12|thyroglobulin
hg38_v1_chr16_+_50548387_50548405	0.0254423	GLI3	ENST00000268459.6|NKD1|ENSG00000140807.7|NKD inhibitor of WNT signaling pathway 1
hg38_v1_chr18_+_3451647_3451724	0.025395	GLI3	ENST00000345133.9|TGIF1|ENSG00000177426.22|TGFB induced factor homeobox 1	ENST00000330513.10|TGIF1|ENSG00000177426.22|TGFB induced factor homeobox 1	ENST00000549546.5|TGIF1|ENSG00000177426.22|TGFB induced factor homeobox 1
hg38_v1_chr6_+_89080739_89080761	0.0251796	GLI3	ENST00000369472.1|PNRC1|ENSG00000146278.11|proline rich nuclear receptor coactivator 1	ENST00000336032.4|PNRC1|ENSG00000146278.11|proline rich nuclear receptor coactivator 1
hg38_v1_chr5_-_180809811_180809880	0.0250749	GLI3	ENST00000446023.6|MGAT1|ENSG00000131446.17|alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
hg38_v1_chr5_+_181147586_181147638	0.0250121	GLI3	ENST00000641492.1|OR2V2|ENSG00000182613.3|olfactory receptor family 2 subfamily V member 2	ENST00000641791.1|OR2V2|ENSG00000182613.3|olfactory receptor family 2 subfamily V member 2
hg38_v1_chr12_-_7751605_7751622	0.0246784	GLI3	ENST00000354629.9|CLEC4C|ENSG00000198178.11|C-type lectin domain family 4 member C
hg38_v1_chr6_+_10887036_10887095	0.0237773	GLI3	ENST00000283141.11|SYCP2L|ENSG00000153157.13|synaptonemal complex protein 2 like
hg38_v1_chr12_-_213338_213385	0.0237115	GLI3	ENST00000424061.6|SLC6A12|ENSG00000111181.13|solute carrier family 6 member 12
hg38_v1_chr6_-_24489565_24489583	0.0236453	GLI3	ENST00000230036.2|GPLD1|ENSG00000112293.15|glycosylphosphatidylinositol specific phospholipase D1
hg38_v1_chr18_-_21111778_21111824	0.0233848	GLI3	ENST00000399799.3|ROCK1|ENSG00000067900.8|Rho associated coiled-coil containing protein kinase 1
hg38_v1_chr18_-_77132757_77132769	0.0233819	GLI3	ENST00000397860.7|MBP|ENSG00000197971.16|myelin basic protein
hg38_v1_chr3_+_4493471_4493561	0.0231956	GLI3	ENST00000544951.6|ITPR1|ENSG00000150995.21|inositol 1,4,5-trisphosphate receptor type 1	ENST00000650294.1|ITPR1|ENSG00000150995.21|inositol 1,4,5-trisphosphate receptor type 1
hg38_v1_chr9_+_128504655_128504757	0.0229841	GLI3	ENST00000683748.1|GLE1|ENSG00000119392.16|GLE1 RNA export mediator	ENST00000684314.1|GLE1|ENSG00000119392.16|GLE1 RNA export mediator	ENST00000684331.1|GLE1|ENSG00000119392.16|GLE1 RNA export mediator	ENST00000684646.1|GLE1|ENSG00000119392.16|GLE1 RNA export mediator	ENST00000309971.9|GLE1|ENSG00000119392.16|GLE1 RNA export mediator	ENST00000684139.1|GLE1|ENSG00000119392.16|GLE1 RNA export mediator	ENST00000372770.4|GLE1|ENSG00000119392.16|GLE1 RNA export mediator
hg38_v1_chr11_-_101129706_101129735	0.0229708	GLI3	ENST00000534013.5|PGR|ENSG00000082175.15|progesterone receptor
hg38_v1_chr1_+_227735421_227735472	0.0227716	GLI3	ENST00000681149.1|SNAP47|ENSG00000143740.15|synaptosome associated protein 47	ENST00000418653.6|SNAP47|ENSG00000143740.15|synaptosome associated protein 47	ENST00000478768.3|SNAP47|ENSG00000143740.15|synaptosome associated protein 47	ENST00000681929.1|SNAP47|ENSG00000143740.15|synaptosome associated protein 47	ENST00000617596.5|SNAP47|ENSG00000143740.15|synaptosome associated protein 47	ENST00000426344.6|SNAP47|ENSG00000143740.15|synaptosome associated protein 47
hg38_v1_chr5_+_178130996_178131062	0.0227189	GLI3	ENST00000515098.5|RMND5B|ENSG00000145916.19|required for meiotic nuclear division 5 homolog B	ENST00000502814.5|RMND5B|ENSG00000145916.19|required for meiotic nuclear division 5 homolog B	ENST00000313386.9|RMND5B|ENSG00000145916.19|required for meiotic nuclear division 5 homolog B	ENST00000507457.5|RMND5B|ENSG00000145916.19|required for meiotic nuclear division 5 homolog B	ENST00000508647.5|RMND5B|ENSG00000145916.19|required for meiotic nuclear division 5 homolog B
hg38_v1_chrX_-_139642518_139642682	0.0224514	GLI3	ENST00000370573.8|MCF2|ENSG00000101977.21|MCF.2 cell line derived transforming sequence	ENST00000338585.6|MCF2|ENSG00000101977.21|MCF.2 cell line derived transforming sequence
hg38_v1_chr19_+_54874218_54874261	0.0224383	GLI3	ENST00000355524.8|FCAR|ENSG00000186431.19|Fc fragment of IgA receptor	ENST00000391726.7|FCAR|ENSG00000186431.19|Fc fragment of IgA receptor
hg38_v1_chr6_-_167157980_167157980	0.0222466	GLI3	ENST00000366834.2|GPR31|ENSG00000120436.4|G protein-coupled receptor 31
hg38_v1_chr5_-_44389407_44389434	0.0219471	GLI3	ENST00000264664.5|FGF10|ENSG00000070193.5|fibroblast growth factor 10
hg38_v1_chr16_+_70114306_70114372	0.021869	GLI3	ENST00000288050.9|PDPR|ENSG00000090857.14|pyruvate dehydrogenase phosphatase regulatory subunit	ENST00000398122.7|PDPR|ENSG00000090857.14|pyruvate dehydrogenase phosphatase regulatory subunit	ENST00000568530.5|PDPR|ENSG00000090857.14|pyruvate dehydrogenase phosphatase regulatory subunit
hg38_v1_chr1_-_156752223_156752242	0.0217712	GLI3	ENST00000368209.9|HDGF|ENSG00000143321.19|heparin binding growth factor
hg38_v1_chr5_+_172905217_172905368	0.0217395	GLI3	ENST00000518247.5|ERGIC1|ENSG00000113719.16|endoplasmic reticulum-golgi intermediate compartment 1	ENST00000326654.6|ERGIC1|ENSG00000113719.16|endoplasmic reticulum-golgi intermediate compartment 1
hg38_v1_chr11_-_30586866_30586877	0.0216735	GLI3	ENST00000528686.2|MPPED2|ENSG00000066382.17|metallophosphoesterase domain containing 2
hg38_v1_chrX_-_6227180_6227217	0.0216029	GLI3	ENST00000381093.6|NLGN4X|ENSG00000146938.16|neuroligin 4 X-linked
hg38_v1_chr1_+_160796098_160796113	0.0214469	GLI3	ENST00000392203.8|LY9|ENSG00000122224.18|lymphocyte antigen 9
hg38_v1_chr17_-_352784_352842	0.0214045	GLI3	ENST00000577079.5|RPH3AL|ENSG00000181031.16|rabphilin 3A like (without C2 domains)	ENST00000331302.12|RPH3AL|ENSG00000181031.16|rabphilin 3A like (without C2 domains)	ENST00000618002.4|RPH3AL|ENSG00000181031.16|rabphilin 3A like (without C2 domains)	ENST00000536489.6|RPH3AL|ENSG00000181031.16|rabphilin 3A like (without C2 domains)
hg38_v1_chrY_-_23199008_23199010	0.0210685	GLI3	ENST00000405239.6|DAZ1|ENSG00000188120.16|deleted in azoospermia 1	ENST00000426000.6|DAZ1|ENSG00000188120.16|deleted in azoospermia 1	ENST00000540248.5|DAZ1|ENSG00000188120.16|deleted in azoospermia 1
hg38_v1_chr9_-_136748515_136748531	0.0206413	GLI3	ENST00000341206.9|LCN6|ENSG00000267206.6|lipocalin 6
hg38_v1_chr20_-_41317602_41317740	0.0204616	GLI3	ENST00000559234.5|ZHX3|ENSG00000174306.22|zinc fingers and homeoboxes 3	ENST00000683867.1|ZHX3|ENSG00000174306.22|zinc fingers and homeoboxes 3
hg38_v1_chr10_+_23095556_23095596	0.0202135	GLI3	ENST00000376510.8|MSRB2|ENSG00000148450.13|methionine sulfoxide reductase B2
hg38_v1_chr20_-_9839026_9839081	0.0200903	GLI3	ENST00000378429.3|PAK5|ENSG00000101349.17|p21 (RAC1) activated kinase 5	ENST00000353224.10|PAK5|ENSG00000101349.17|p21 (RAC1) activated kinase 5
hg38_v1_chr10_-_103351133_103351156	0.0200485	GLI3	ENST00000369847.4|PCGF6|ENSG00000156374.16|polycomb group ring finger 6
hg38_v1_chr20_-_63969890_63969938	0.0199934	GLI3	ENST00000369888.6|ZNF512B|ENSG00000196700.9|zinc finger protein 512B
hg38_v1_chr12_-_81759307_81759359	0.0199899	GLI3	ENST00000547623.5|PPFIA2|ENSG00000139220.17|PTPRF interacting protein alpha 2	ENST00000549396.6|PPFIA2|ENSG00000139220.17|PTPRF interacting protein alpha 2
hg38_v1_chr5_-_54985579_54985601	0.0198537	GLI3	ENST00000381405.5|ESM1|ENSG00000164283.13|endothelial cell specific molecule 1	ENST00000381403.4|ESM1|ENSG00000164283.13|endothelial cell specific molecule 1
hg38_v1_chr8_-_22669084_22669148	0.0196724	GLI3	ENST00000519513.5|BIN3|ENSG00000147439.13|bridging integrator 3	ENST00000276416.11|BIN3|ENSG00000147439.13|bridging integrator 3	ENST00000520292.1|BIN3|ENSG00000147439.13|bridging integrator 3	ENST00000522268.1|BIN3|ENSG00000147439.13|bridging integrator 3
hg38_v1_chr8_+_22579139_22579150	0.0195082	GLI3	ENST00000397761.6|PDLIM2|ENSG00000120913.23|PDZ and LIM domain 2
hg38_v1_chr9_+_130172343_130172442	0.0194858	GLI3	ENST00000372398.6|NCS1|ENSG00000107130.10|neuronal calcium sensor 1
hg38_v1_chr16_-_800705_800770	0.019337	GLI3	ENST00000248150.5|GNG13|ENSG00000127588.5|G protein subunit gamma 13
hg38_v1_chr17_-_35487739_35487815	0.01933	GLI3	ENST00000628453.3|ENSG00000205045.11|ENSG00000205045.11|schlafen family member 12 like
hg38_v1_chr19_-_49878350_49878459	0.0192657	GLI3	ENST00000391834.6|AKT1S1|ENSG00000204673.11|AKT1 substrate 1	ENST00000391830.1|AKT1S1|ENSG00000204673.11|AKT1 substrate 1
hg38_v1_chr11_+_65181920_65181983	0.0189896	GLI3	ENST00000279247.11|CAPN1|ENSG00000014216.16|calpain 1	ENST00000532285.1|CAPN1|ENSG00000014216.16|calpain 1	ENST00000534373.5|CAPN1|ENSG00000014216.16|calpain 1
hg38_v1_chr11_+_18455822_18455868	0.0188366	GLI3	ENST00000615355.4|LDHAL6A|ENSG00000166800.10|lactate dehydrogenase A like 6A	ENST00000396213.7|LDHAL6A|ENSG00000166800.10|lactate dehydrogenase A like 6A	ENST00000280706.3|LDHAL6A|ENSG00000166800.10|lactate dehydrogenase A like 6A
hg38_v1_chr12_-_11310420_11310438	0.0184743	GLI3	ENST00000621732.4|PRB4|ENSG00000230657.8|proline rich protein BstNI subfamily 4	ENST00000445719.2|PRB4|ENSG00000230657.8|proline rich protein BstNI subfamily 4	ENST00000279575.7|PRB4|ENSG00000230657.8|proline rich protein BstNI subfamily 4
hg38_v1_chr1_+_201982613_201982667	0.0183728	GLI3	ENST00000295640.9|RNPEP|ENSG00000176393.11|arginyl aminopeptidase	ENST00000367286.7|RNPEP|ENSG00000176393.11|arginyl aminopeptidase
hg38_v1_chr19_+_35115787_35115866	0.0182231	GLI3	ENST00000604404.6|FXYD3|ENSG00000089356.19|FXYD domain containing ion transport regulator 3
hg38_v1_chr14_+_92923143_92923176	0.0182162	GLI3	ENST00000216492.10|CHGA|ENSG00000100604.13|chromogranin A	ENST00000334654.4|CHGA|ENSG00000100604.13|chromogranin A
hg38_v1_chr14_+_61529005_61529128	0.0181809	GLI3	ENST00000556347.1|ENSG00000258989.1|ENSG00000258989.1|novel protein
hg38_v1_chrX_+_153764178_153764231	0.0181385	GLI3	ENST00000538966.5|PLXNB3|ENSG00000198753.12|plexin B3
hg38_v1_chr17_+_82735551_82735638	0.0181266	GLI3	ENST00000300784.8|FN3K|ENSG00000167363.14|fructosamine 3 kinase
hg38_v1_chr15_+_75843307_75843378	0.0181021	GLI3	ENST00000569423.5|UBE2Q2|ENSG00000140367.12|ubiquitin conjugating enzyme E2 Q2
hg38_v1_chr17_+_78378633_78378678	0.0179115	GLI3	ENST00000262764.11|PGS1|ENSG00000087157.19|phosphatidylglycerophosphate synthase 1	ENST00000589689.5|PGS1|ENSG00000087157.19|phosphatidylglycerophosphate synthase 1	ENST00000592043.5|PGS1|ENSG00000087157.19|phosphatidylglycerophosphate synthase 1	ENST00000587356.1|PGS1|ENSG00000087157.19|phosphatidylglycerophosphate synthase 1
hg38_v1_chr7_+_38178318_38178401	0.0176413	GLI3	ENST00000396013.5|STARD3NL|ENSG00000010270.14|STARD3 N-terminal like	ENST00000440144.5|STARD3NL|ENSG00000010270.14|STARD3 N-terminal like	ENST00000453225.5|STARD3NL|ENSG00000010270.14|STARD3 N-terminal like	ENST00000429075.1|STARD3NL|ENSG00000010270.14|STARD3 N-terminal like
hg38_v1_chr11_+_64291285_64291325	0.0176204	GLI3	ENST00000422670.7|KCNK4|ENSG00000182450.13|potassium two pore domain channel subfamily K member 4	ENST00000538767.1|KCNK4|ENSG00000182450.13|potassium two pore domain channel subfamily K member 4
hg38_v1_chr4_+_89111521_89111547	0.01758	GLI3	ENST00000603357.3|TIGD2|ENSG00000180346.4|tigger transposable element derived 2
hg38_v1_chr1_-_28232996_28233042	0.017322	GLI3	ENST00000263697.6|DNAJC8|ENSG00000126698.11|DnaJ heat shock protein family (Hsp40) member C8
hg38_v1_chr4_+_61202142_61202182	0.0171134	GLI3	ENST00000514591.5|ADGRL3|ENSG00000150471.17|adhesion G protein-coupled receptor L3
hg38_v1_chr20_+_38304149_38304168	0.0168541	GLI3	ENST00000262865.9|BPI|ENSG00000101425.14|bactericidal permeability increasing protein	ENST00000642449.2|BPI|ENSG00000101425.14|bactericidal permeability increasing protein
hg38_v1_chr3_+_184363427_184363434	0.0161623	GLI3	ENST00000429568.1|POLR2H|ENSG00000163882.9|RNA polymerase II, I and III subunit H
hg38_v1_chr4_+_87422564_87422648	0.0159145	GLI3	ENST00000302174.9|NUDT9|ENSG00000170502.13|nudix hydrolase 9	ENST00000512216.5|NUDT9|ENSG00000170502.13|nudix hydrolase 9	ENST00000473942.5|NUDT9|ENSG00000170502.13|nudix hydrolase 9
hg38_v1_chr2_+_26848424_26848508	0.0154057	GLI3	ENST00000431402.5|DPYSL5|ENSG00000157851.17|dihydropyrimidinase like 5	ENST00000614712.4|DPYSL5|ENSG00000157851.17|dihydropyrimidinase like 5	ENST00000434719.1|DPYSL5|ENSG00000157851.17|dihydropyrimidinase like 5
hg38_v1_chr7_+_100589573_100589629	0.0153581	GLI3	ENST00000468962.5|FBXO24|ENSG00000106336.13|F-box protein 24	ENST00000427939.2|FBXO24|ENSG00000106336.13|F-box protein 24
hg38_v1_chr6_-_136289778_136289815	0.0153265	GLI3	ENST00000530767.5|BCLAF1|ENSG00000029363.17|BCL2 associated transcription factor 1	ENST00000527759.5|BCLAF1|ENSG00000029363.17|BCL2 associated transcription factor 1
hg38_v1_chr15_+_75023576_75023614	0.0151877	GLI3	ENST00000564923.5|PPCDC|ENSG00000138621.12|phosphopantothenoylcysteine decarboxylase	ENST00000569562.5|PPCDC|ENSG00000138621.12|phosphopantothenoylcysteine decarboxylase	ENST00000342932.8|PPCDC|ENSG00000138621.12|phosphopantothenoylcysteine decarboxylase	ENST00000568649.5|PPCDC|ENSG00000138621.12|phosphopantothenoylcysteine decarboxylase
hg38_v1_chr11_+_108008880_108008976	0.0151704	GLI3	ENST00000393094.7|CUL5|ENSG00000166266.14|cullin 5
hg38_v1_chr9_-_83956677_83956767	0.0151099	GLI3	ENST00000376344.8|C9orf64|ENSG00000165118.15|chromosome 9 open reading frame 64
hg38_v1_chr5_-_163460067_163460128	0.0150834	GLI3	ENST00000302764.9|NUDCD2|ENSG00000170584.11|NudC domain containing 2
hg38_v1_chr4_+_2829797_2829953	0.0149203	GLI3	ENST00000513069.1|SH3BP2|ENSG00000087266.17|SH3 domain binding protein 2
hg38_v1_chr9_-_136764515_136764524	0.0144853	GLI3	ENST00000316144.6|LCN15|ENSG00000177984.7|lipocalin 15
hg38_v1_chrX_+_141880562_141880562	0.0143266	GLI3	ENST00000443323.2|MAGEC3|ENSG00000165509.13|MAGE family member C3
hg38_v1_chr1_+_180928133_180928159	0.0142676	GLI3	ENST00000367587.1|KIAA1614|ENSG00000135835.12|KIAA1614
hg38_v1_chr16_-_88686453_88686513	0.0141986	GLI3	ENST00000332281.6|SNAI3|ENSG00000185669.6|snail family transcriptional repressor 3
hg38_v1_chr9_+_35042213_35042252	0.0141151	GLI3	ENST00000378745.3|C9orf131|ENSG00000174038.13|chromosome 9 open reading frame 131	ENST00000312292.6|C9orf131|ENSG00000174038.13|chromosome 9 open reading frame 131
hg38_v1_chr14_+_69611586_69611604	0.0140084	GLI3	ENST00000342745.5|SUSD6|ENSG00000100647.8|sushi domain containing 6
hg38_v1_chr3_-_155293665_155293691	0.0139674	GLI3	ENST00000489090.2|STRIT1|ENSG00000240045.2|small transmembrane regulator of ion transport 1
hg38_v1_chr11_+_64318091_64318264	0.0139043	GLI3	ENST00000265462.9|PRDX5|ENSG00000126432.14|peroxiredoxin 5	ENST00000352435.8|PRDX5|ENSG00000126432.14|peroxiredoxin 5	ENST00000347941.4|PRDX5|ENSG00000126432.14|peroxiredoxin 5
hg38_v1_chr19_-_12830655_12830684	0.0138738	GLI3	ENST00000586969.5|RTBDN|ENSG00000132026.15|retbindin	ENST00000589681.5|RTBDN|ENSG00000132026.15|retbindin	ENST00000585384.5|RTBDN|ENSG00000132026.15|retbindin	ENST00000393233.6|RTBDN|ENSG00000132026.15|retbindin	ENST00000589808.5|RTBDN|ENSG00000132026.15|retbindin
hg38_v1_chr7_-_42932148_42932214	0.0135497	GLI3	ENST00000223321.9|PSMA2|ENSG00000106588.12|proteasome 20S subunit alpha 2	ENST00000445517.1|PSMA2|ENSG00000106588.12|proteasome 20S subunit alpha 2	ENST00000677581.1|ENSG00000256646.8|ENSG00000256646.8|novel PSMA2 and C7orf25 readthrough
hg38_v1_chr5_+_161848536_161848625	0.0133356	GLI3	ENST00000519621.2|GABRA1|ENSG00000022355.18|gamma-aminobutyric acid type A receptor subunit alpha1	ENST00000636573.1|GABRA1|ENSG00000022355.18|gamma-aminobutyric acid type A receptor subunit alpha1
hg38_v1_chr7_+_983175_983188	0.0133268	GLI3	ENST00000308919.12|CYP2W1|ENSG00000073067.14|cytochrome P450 family 2 subfamily W member 1
hg38_v1_chr15_-_25863304_25863371	0.0131735	GLI3	ENST00000555815.6|ATP10A|ENSG00000206190.12|ATPase phospholipid transporting 10A (putative)	ENST00000673716.1|ATP10A|ENSG00000206190.12|ATPase phospholipid transporting 10A (putative)
hg38_v1_chr10_+_104269163_104269200	0.0131281	GLI3	ENST00000338595.7|GSTO2|ENSG00000065621.15|glutathione S-transferase omega 2
hg38_v1_chr5_+_170504243_170504360	0.013084	GLI3	ENST00000520740.5|KCNIP1|ENSG00000182132.14|potassium voltage-gated channel interacting protein 1
hg38_v1_chr11_-_65595791_65595832	0.0128146	GLI3	ENST00000340313.5|KCNK7|ENSG00000173338.13|potassium two pore domain channel subfamily K member 7	ENST00000342202.8|KCNK7|ENSG00000173338.13|potassium two pore domain channel subfamily K member 7
hg38_v1_chr3_+_4493340_4493356	0.0127936	GLI3	ENST00000357086.10|ITPR1|ENSG00000150995.21|inositol 1,4,5-trisphosphate receptor type 1	ENST00000354582.12|ITPR1|ENSG00000150995.21|inositol 1,4,5-trisphosphate receptor type 1	ENST00000649015.2|ITPR1|ENSG00000150995.21|inositol 1,4,5-trisphosphate receptor type 1	ENST00000467056.6|ITPR1|ENSG00000150995.21|inositol 1,4,5-trisphosphate receptor type 1
hg38_v1_chr15_+_40252888_40253184	0.0126745	GLI3	ENST00000559139.5|PAK6|ENSG00000137843.12|p21 (RAC1) activated kinase 6	ENST00000560669.5|PAK6|ENSG00000137843.12|p21 (RAC1) activated kinase 6	ENST00000542403.3|PAK6|ENSG00000137843.12|p21 (RAC1) activated kinase 6
hg38_v1_chr22_-_17773976_17774016	0.0123622	GLI3	ENST00000317361.11|BID|ENSG00000015475.19|BH3 interacting domain death agonist
hg38_v1_chr11_-_88337722_88337791	0.012212	GLI3	ENST00000677976.1|CTSC|ENSG00000109861.17|cathepsin C	ENST00000528020.2|CTSC|ENSG00000109861.17|cathepsin C	ENST00000393301.5|CTSC|ENSG00000109861.17|cathepsin C	ENST00000529974.2|CTSC|ENSG00000109861.17|cathepsin C	ENST00000227266.10|CTSC|ENSG00000109861.17|cathepsin C	ENST00000678464.1|CTSC|ENSG00000109861.17|cathepsin C	ENST00000679199.1|CTSC|ENSG00000109861.17|cathepsin C	ENST00000527018.6|CTSC|ENSG00000109861.17|cathepsin C	ENST00000679224.1|CTSC|ENSG00000109861.17|cathepsin C	ENST00000678506.1|CTSC|ENSG00000109861.17|cathepsin C	ENST00000678915.1|CTSC|ENSG00000109861.17|cathepsin C	ENST00000524463.6|CTSC|ENSG00000109861.17|cathepsin C
hg38_v1_chrX_+_13655295_13655295	0.012126	GLI3	ENST00000380600.1|TCEANC|ENSG00000176896.8|transcription elongation factor A N-terminal and central domain containing
hg38_v1_chr17_-_28897724_28897740	0.012071	GLI3	ENST00000394908.9|FLOT2|ENSG00000132589.16|flotillin 2
hg38_v1_chr2_+_26562539_26562609	0.0118293	GLI3	ENST00000409392.5|FAM166C|ENSG00000173557.15|family with sequence similarity 166 member C	ENST00000329615.4|FAM166C|ENSG00000173557.15|family with sequence similarity 166 member C
hg38_v1_chr21_-_33915762_33915811	0.0115659	GLI3	ENST00000290299.7|ATP5PO|ENSG00000241837.7|ATP synthase peripheral stalk subunit OSCP
hg38_v1_chr10_-_70283998_70284011	0.0115466	GLI3	ENST00000277942.7|NPFFR1|ENSG00000148734.8|neuropeptide FF receptor 1
hg38_v1_chr9_-_131531224_131531286	0.0114671	GLI3	ENST00000372208.7|UCK1|ENSG00000130717.13|uridine-cytidine kinase 1	ENST00000372215.5|UCK1|ENSG00000130717.13|uridine-cytidine kinase 1
hg38_v1_chr16_-_71289609_71289728	0.0114455	GLI3	ENST00000338099.9|CMTR2|ENSG00000180917.18|cap methyltransferase 2	ENST00000563876.1|CMTR2|ENSG00000180917.18|cap methyltransferase 2
hg38_v1_chr3_+_184363387_184363420	0.0114235	GLI3	ENST00000452961.5|POLR2H|ENSG00000163882.9|RNA polymerase II, I and III subunit H
hg38_v1_chr20_+_18137886_18137938	0.0109976	GLI3	ENST00000677266.1|KAT14|ENSG00000149474.14|lysine acetyltransferase 14
hg38_v1_chr7_-_5423543_5423564	0.0108624	GLI3	ENST00000399537.8|TNRC18|ENSG00000182095.15|trinucleotide repeat containing 18
hg38_v1_chr10_+_102644887_102644983	0.0107915	GLI3	ENST00000462202.3|TRIM8|ENSG00000171206.15|tripartite motif containing 8
hg38_v1_chr4_+_678189_678338	0.0103655	GLI3	ENST00000507804.1|MYL5|ENSG00000215375.6|myosin light chain 5
hg38_v1_chr7_-_29195186_29195276	0.00985615	GLI3	ENST00000449801.5|CPVL|ENSG00000106066.15|carboxypeptidase vitellogenic like	ENST00000409850.5|CPVL|ENSG00000106066.15|carboxypeptidase vitellogenic like
hg38_v1_chr11_+_11841953_11842071	0.00947132	GLI3	ENST00000527733.7|USP47|ENSG00000170242.19|ubiquitin specific peptidase 47	ENST00000399455.2|USP47|ENSG00000170242.19|ubiquitin specific peptidase 47
hg38_v1_chr12_+_6868093_6868153	0.00946304	GLI3	ENST00000488464.6|TPI1|ENSG00000111669.15|triosephosphate isomerase 1	ENST00000535434.5|TPI1|ENSG00000111669.15|triosephosphate isomerase 1	ENST00000493987.5|TPI1|ENSG00000111669.15|triosephosphate isomerase 1
hg38_v1_chr1_-_182604379_182604399	0.00932026	GLI3	ENST00000367558.6|RGS16|ENSG00000143333.7|regulator of G protein signaling 16
hg38_v1_chr5_+_161848314_161848444	0.00922189	GLI3	ENST00000437025.6|GABRA1|ENSG00000022355.18|gamma-aminobutyric acid type A receptor subunit alpha1
hg38_v1_chr1_+_10430720_10430804	0.00921448	GLI3	ENST00000602296.6|CENPS-CORT|ENSG00000251503.8|CENPS-CORT readthrough
hg38_v1_chr20_-_5316948_5316959	0.00891553	GLI3	ENST00000678254.1|PROKR2|ENSG00000101292.8|prokineticin receptor 2
hg38_v1_chr10_+_110567666_110567765	0.00885196	GLI3	ENST00000361804.5|SMC3|ENSG00000108055.10|structural maintenance of chromosomes 3
hg38_v1_chr10_-_6062349_6062376	0.00873896	GLI3	ENST00000379959.8|IL2RA|ENSG00000134460.18|interleukin 2 receptor subunit alpha
hg38_v1_chr11_-_62573846_62573930	0.00873636	GLI3	ENST00000329251.5|EEF1G|ENSG00000254772.10|eukaryotic translation elongation factor 1 gamma
hg38_v1_chr6_+_29656993_29657017	0.00872007	GLI3	ENST00000376888.6|MOG|ENSG00000204655.12|myelin oligodendrocyte glycoprotein
hg38_v1_chr11_+_65261950_65261988	0.00871463	GLI3	ENST00000265465.8|POLA2|ENSG00000014138.9|DNA polymerase alpha 2, accessory subunit
hg38_v1_chr17_-_28897602_28897691	0.00827813	GLI3	ENST00000394906.6|FLOT2|ENSG00000132589.16|flotillin 2	ENST00000585169.5|FLOT2|ENSG00000132589.16|flotillin 2
hg38_v1_chr19_+_57614211_57614272	0.00822963	GLI3	ENST00000600344.1|ZNF134|ENSG00000213762.12|zinc finger protein 134	ENST00000396161.10|ZNF134|ENSG00000213762.12|zinc finger protein 134	ENST00000600883.1|ZNF134|ENSG00000213762.12|zinc finger protein 134
hg38_v1_chr8_+_97644164_97644200	0.0081213	GLI3	ENST00000336273.8|MTDH|ENSG00000147649.10|metadherin
hg38_v1_chr5_+_69492767_69492831	0.00795441	GLI3	ENST00000681041.1|OCLN|ENSG00000197822.12|occludin	ENST00000680098.1|OCLN|ENSG00000197822.12|occludin	ENST00000680784.1|OCLN|ENSG00000197822.12|occludin	ENST00000396442.7|OCLN|ENSG00000197822.12|occludin	ENST00000681895.1|OCLN|ENSG00000197822.12|occludin
hg38_v1_chr3_+_4493442_4493462	0.00794056	GLI3	ENST00000456211.8|ITPR1|ENSG00000150995.21|inositol 1,4,5-trisphosphate receptor type 1	ENST00000443694.5|ITPR1|ENSG00000150995.21|inositol 1,4,5-trisphosphate receptor type 1	ENST00000648266.1|ITPR1|ENSG00000150995.21|inositol 1,4,5-trisphosphate receptor type 1
hg38_v1_chr12_-_6689359_6689380	0.00790011	GLI3	ENST00000683879.1|ZNF384|ENSG00000126746.18|zinc finger protein 384
hg38_v1_chr20_-_50636887_50636890	0.00785393	GLI3	ENST00000045083.6|RIPOR3|ENSG00000042062.13|RIPOR family member 3
hg38_v1_chr1_-_26046111_26046126	0.00780221	GLI3	ENST00000374278.7|SLC30A2|ENSG00000158014.15|solute carrier family 30 member 2	ENST00000374276.4|SLC30A2|ENSG00000158014.15|solute carrier family 30 member 2
hg38_v1_chr19_+_34172492_34172568	0.00778081	GLI3	ENST00000544216.8|LSM14A|ENSG00000257103.9|LSM14A mRNA processing body assembly factor	ENST00000540746.6|LSM14A|ENSG00000257103.9|LSM14A mRNA processing body assembly factor	ENST00000433627.9|LSM14A|ENSG00000257103.9|LSM14A mRNA processing body assembly factor
hg38_v1_chr12_-_21774688_21774730	0.00765747	GLI3	ENST00000240662.3|KCNJ8|ENSG00000121361.5|potassium inwardly rectifying channel subfamily J member 8
hg38_v1_chr9_+_109780179_109780256	0.00748571	GLI3	ENST00000314527.9|PALM2AKAP2|ENSG00000157654.19|PALM2 and AKAP2 fusion
hg38_v1_chr9_-_119369416_119369468	0.00735457	GLI3	ENST00000373964.2|BRINP1|ENSG00000078725.13|BMP/retinoic acid inducible neural specific 1	ENST00000265922.8|BRINP1|ENSG00000078725.13|BMP/retinoic acid inducible neural specific 1
hg38_v1_chr18_+_13611910_13612029	0.00725714	GLI3	ENST00000590308.1|LDLRAD4|ENSG00000168675.19|low density lipoprotein receptor class A domain containing 4
hg38_v1_chr10_+_113553039_113553061	0.00725346	GLI3	ENST00000351270.4|HABP2|ENSG00000148702.15|hyaluronan binding protein 2
hg38_v1_chr12_-_10390023_10390048	0.00722351	GLI3	ENST00000240618.11|KLRK1|ENSG00000213809.9|killer cell lectin like receptor K1
hg38_v1_chr17_+_68511981_68512045	0.00712045	GLI3	ENST00000358598.6|PRKAR1A|ENSG00000108946.15|protein kinase cAMP-dependent type I regulatory subunit alpha
hg38_v1_chrX_+_2828808_2828822	0.00696465	GLI3	ENST00000381163.7|GYG2|ENSG00000056998.20|glycogenin 2
hg38_v1_chr1_-_54801290_54801329	0.00693394	GLI3	ENST00000371276.9|TTC22|ENSG00000006555.11|tetratricopeptide repeat domain 22
hg38_v1_chr5_+_140664896_140664914	0.00619438	GLI3	ENST00000358337.10|WDR55|ENSG00000120314.19|WD repeat domain 55
hg38_v1_chr15_+_74788542_74788549	0.00614702	GLI3	ENST00000567571.5|CSK|ENSG00000103653.17|C-terminal Src kinase
hg38_v1_chr14_+_95535008_95535074	0.00602953	GLI3	ENST00000331334.5|GLRX5|ENSG00000182512.5|glutaredoxin 5
hg38_v1_chr14_-_91510450_91510527	0.00599121	GLI3	ENST00000555462.5|PPP4R3A|ENSG00000100796.18|protein phosphatase 4 regulatory subunit 3A
hg38_v1_chr14_-_52069039_52069115	0.00579747	GLI3	ENST00000216286.10|NID2|ENSG00000087303.18|nidogen 2
hg38_v1_chr16_-_2268373_2268407	0.00563254	GLI3	ENST00000566458.5|RNPS1|ENSG00000205937.12|RNA binding protein with serine rich domain 1
hg38_v1_chr19_-_46784733_46784830	0.00542581	GLI3	ENST00000593713.1|SLC1A5|ENSG00000105281.12|solute carrier family 1 member 5	ENST00000598022.1|SLC1A5|ENSG00000105281.12|solute carrier family 1 member 5	ENST00000434726.6|SLC1A5|ENSG00000105281.12|solute carrier family 1 member 5
hg38_v1_chr11_+_60971777_60971866	0.00532234	GLI3	ENST00000542157.5|CD6|ENSG00000013725.14|CD6 molecule	ENST00000433107.6|CD6|ENSG00000013725.14|CD6 molecule	ENST00000352009.9|CD6|ENSG00000013725.14|CD6 molecule	ENST00000452451.6|CD6|ENSG00000013725.14|CD6 molecule
hg38_v1_chr21_+_43659528_43659571	0.00518806	GLI3	ENST00000340648.6|RRP1B|ENSG00000160208.13|ribosomal RNA processing 1B
hg38_v1_chr7_+_150801695_150801801	0.00516366	GLI3	ENST00000475536.5|TMEM176A|ENSG00000002933.9|transmembrane protein 176A	ENST00000468689.2|TMEM176A|ENSG00000002933.9|transmembrane protein 176A
hg38_v1_chr19_-_35135011_35135068	0.00499332	GLI3	ENST00000310123.8|LGI4|ENSG00000153902.14|leucine rich repeat LGI family member 4
hg38_v1_chr1_+_1308587_1308653	0.00482223	GLI3	ENST00000379031.10|PUSL1|ENSG00000169972.12|pseudouridine synthase like 1
hg38_v1_chr8_-_144475808_144475858	0.00480768	GLI3	ENST00000377317.5|FOXH1|ENSG00000160973.8|forkhead box H1
hg38_v1_chr3_+_15427551_15427634	0.00436	GLI3	ENST00000396842.7|EAF1|ENSG00000144597.14|ELL associated factor 1
hg38_v1_chr16_+_1680337_1680368	0.00414528	GLI3	ENST00000566691.5|JPT2|ENSG00000206053.13|Jupiter microtubule associated homolog 2	ENST00000382710.8|JPT2|ENSG00000206053.13|Jupiter microtubule associated homolog 2
hg38_v1_chr4_+_183659267_183659332	0.00413275	GLI3	ENST00000357207.8|TRAPPC11|ENSG00000168538.16|trafficking protein particle complex 11	ENST00000334690.11|TRAPPC11|ENSG00000168538.16|trafficking protein particle complex 11
hg38_v1_chr5_+_179820895_179820921	0.00386005	GLI3	ENST00000504627.1|SQSTM1|ENSG00000161011.20|sequestosome 1	ENST00000389805.9|SQSTM1|ENSG00000161011.20|sequestosome 1	ENST00000510187.5|SQSTM1|ENSG00000161011.20|sequestosome 1
hg38_v1_chr9_-_112718021_112718149	0.00384123	GLI3	ENST00000374234.1|INIP|ENSG00000148153.14|INTS3 and NABP interacting protein	ENST00000374242.9|INIP|ENSG00000148153.14|INTS3 and NABP interacting protein	ENST00000374236.5|INIP|ENSG00000148153.14|INTS3 and NABP interacting protein
hg38_v1_chr5_-_1345084_1345105	0.00380821	GLI3	ENST00000320895.10|CLPTM1L|ENSG00000049656.14|CLPTM1 like
hg38_v1_chr10_+_49679637_49679688	0.00349189	GLI3	ENST00000374113.3|C10orf53|ENSG00000178645.13|chromosome 10 open reading frame 53	ENST00000374111.8|C10orf53|ENSG00000178645.13|chromosome 10 open reading frame 53	ENST00000374112.7|C10orf53|ENSG00000178645.13|chromosome 10 open reading frame 53	ENST00000535836.1|C10orf53|ENSG00000178645.13|chromosome 10 open reading frame 53
hg38_v1_chr17_-_7080275_7080307	0.00323617	GLI3	ENST00000571664.1|CLEC10A|ENSG00000132514.14|C-type lectin domain containing 10A	ENST00000254868.8|CLEC10A|ENSG00000132514.14|C-type lectin domain containing 10A
hg38_v1_chr12_-_6689244_6689337	0.0027585	GLI3	ENST00000361959.7|ZNF384|ENSG00000126746.18|zinc finger protein 384	ENST00000436774.6|ZNF384|ENSG00000126746.18|zinc finger protein 384	ENST00000544482.1|ZNF384|ENSG00000126746.18|zinc finger protein 384
hg38_v1_chr3_+_46163465_46163604	0.00262003	GLI3	ENST00000357422.2|CCR3|ENSG00000183625.16|C-C motif chemokine receptor 3
hg38_v1_chr1_-_19484635_19484664	0.00237031	GLI3	ENST00000433834.5|CAPZB|ENSG00000077549.19|capping actin protein of muscle Z-line subunit beta
hg38_v1_chr19_-_3606849_3606900	0.00228557	GLI3	ENST00000375190.10|TBXA2R|ENSG00000006638.13|thromboxane A2 receptor
hg38_v1_chr8_+_22042790_22042854	0.0018038	GLI3	ENST00000359441.4|FGF17|ENSG00000158815.11|fibroblast growth factor 17
hg38_v1_chr19_-_11384299_11384327	0.00174584	GLI3	ENST00000592375.6|EPOR|ENSG00000187266.14|erythropoietin receptor	ENST00000222139.11|EPOR|ENSG00000187266.14|erythropoietin receptor
hg38_v1_chr1_-_156500763_156500851	0.00173205	GLI3	ENST00000348159.9|MEF2D|ENSG00000116604.18|myocyte enhancer factor 2D	ENST00000489057.1|MEF2D|ENSG00000116604.18|myocyte enhancer factor 2D
hg38_v1_chr20_+_50731571_50731586	0.00148062	GLI3	ENST00000371610.7|PARD6B|ENSG00000124171.9|par-6 family cell polarity regulator beta
hg38_v1_chr20_+_41136944_41137006	0.0014156	GLI3	ENST00000244007.7|PLCG1|ENSG00000124181.14|phospholipase C gamma 1
hg38_v1_chr12_-_81758641_81758661	0.00130229	GLI3	ENST00000552948.5|PPFIA2|ENSG00000139220.17|PTPRF interacting protein alpha 2	ENST00000548586.5|PPFIA2|ENSG00000139220.17|PTPRF interacting protein alpha 2
hg38_v1_chr22_+_31496387_31496570	0.0012468	GLI3	ENST00000443011.5|SFI1|ENSG00000198089.16|SFI1 centrin binding protein	ENST00000400288.7|SFI1|ENSG00000198089.16|SFI1 centrin binding protein	ENST00000400289.5|SFI1|ENSG00000198089.16|SFI1 centrin binding protein	ENST00000444859.5|SFI1|ENSG00000198089.16|SFI1 centrin binding protein
hg38_v1_chr20_+_3046008_3046087	0.00105043	GLI3	ENST00000380325.4|MRPS26|ENSG00000125901.6|mitochondrial ribosomal protein S26
hg38_v1_chr15_+_90884429_90884451	0.000708985	GLI3	ENST00000414248.6|FES|ENSG00000182511.12|FES proto-oncogene, tyrosine kinase
hg38_v1_chr15_-_42920638_42920794	0.000700966	GLI3	ENST00000566931.1|TTBK2|ENSG00000128881.17|tau tubulin kinase 2	ENST00000564431.5|TTBK2|ENSG00000128881.17|tau tubulin kinase 2	ENST00000567274.5|TTBK2|ENSG00000128881.17|tau tubulin kinase 2	ENST00000267890.11|TTBK2|ENSG00000128881.17|tau tubulin kinase 2
hg38_v1_chr16_+_1678304_1678323	0.000599542	GLI3	ENST00000569765.5|JPT2|ENSG00000206053.13|Jupiter microtubule associated homolog 2
hg38_v1_chr12_-_6689450_6689517	0.000173786	GLI3	ENST00000355772.8|ZNF384|ENSG00000126746.18|zinc finger protein 384	ENST00000417772.7|ZNF384|ENSG00000126746.18|zinc finger protein 384	ENST00000319770.7|ZNF384|ENSG00000126746.18|zinc finger protein 384	ENST00000396801.7|ZNF384|ENSG00000126746.18|zinc finger protein 384
hg38_v1_chr14_+_70907450_70907476	0.000107229	GLI3	ENST00000304743.7|PCNX1|ENSG00000100731.16|pecanex 1
hg38_v1_chr19_-_4454084_4454093	1.80231e-05	GLI3	ENST00000591919.5|UBXN6|ENSG00000167671.12|UBX domain protein 6
