hg38_v1_chr9_+_96928310_96928310	0.906744	LHX3	ENST00000354649.7|NUTM2G|ENSG00000188152.13|NUT family member 2G
hg38_v1_chr12_-_10130241_10130264	0.704376	LHX3	ENST00000353231.9|CLEC7A|ENSG00000172243.18|C-type lectin domain containing 7A	ENST00000525605.1|CLEC7A|ENSG00000172243.18|C-type lectin domain containing 7A
hg38_v1_chr12_-_10130143_10130218	0.658015	LHX3	ENST00000298523.9|CLEC7A|ENSG00000172243.18|C-type lectin domain containing 7A	ENST00000396484.6|CLEC7A|ENSG00000172243.18|C-type lectin domain containing 7A	ENST00000310002.4|CLEC7A|ENSG00000172243.18|C-type lectin domain containing 7A	ENST00000304084.13|CLEC7A|ENSG00000172243.18|C-type lectin domain containing 7A
hg38_v1_chr12_-_10130082_10130142	0.596742	LHX3	ENST00000533022.5|CLEC7A|ENSG00000172243.18|C-type lectin domain containing 7A
hg38_v1_chr17_-_40937445_40937486	0.549535	LHX3	ENST00000436344.7|KRT23|ENSG00000108244.17|keratin 23	ENST00000485751.1|KRT23|ENSG00000108244.17|keratin 23
hg38_v1_chr17_-_40937641_40937649	0.541525	LHX3	ENST00000209718.8|KRT23|ENSG00000108244.17|keratin 23
hg38_v1_chr19_+_11346556_11346581	0.525511	LHX3	ENST00000587531.5|CCDC159|ENSG00000183401.12|coiled-coil domain containing 159
hg38_v1_chr9_-_72953047_72953061	0.519429	LHX3	ENST00000297785.8|ALDH1A1|ENSG00000165092.13|aldehyde dehydrogenase 1 family member A1	ENST00000376939.5|ALDH1A1|ENSG00000165092.13|aldehyde dehydrogenase 1 family member A1
hg38_v1_chr3_+_41194741_41194994	0.495966	LHX3	ENST00000643541.1|CTNNB1|ENSG00000168036.18|catenin beta 1	ENST00000426215.5|CTNNB1|ENSG00000168036.18|catenin beta 1	ENST00000645210.1|CTNNB1|ENSG00000168036.18|catenin beta 1	ENST00000646381.1|CTNNB1|ENSG00000168036.18|catenin beta 1	ENST00000405570.6|CTNNB1|ENSG00000168036.18|catenin beta 1	ENST00000642248.1|CTNNB1|ENSG00000168036.18|catenin beta 1	ENST00000433400.6|CTNNB1|ENSG00000168036.18|catenin beta 1
hg38_v1_chr1_-_111488795_111488837	0.493623	LHX3	ENST00000472933.2|TMIGD3|ENSG00000121933.19|transmembrane and immunoglobulin domain containing 3
hg38_v1_chr5_+_148312416_148312434	0.447065	LHX3	ENST00000274565.5|SPINK7|ENSG00000145879.11|serine peptidase inhibitor Kazal type 7
hg38_v1_chr9_+_122370523_122370556	0.434218	LHX3	ENST00000643810.1|PTGS1|ENSG00000095303.17|prostaglandin-endoperoxide synthase 1	ENST00000540753.6|PTGS1|ENSG00000095303.17|prostaglandin-endoperoxide synthase 1
hg38_v1_chr11_-_63608542_63608581	0.430282	LHX3	ENST00000540943.1|PLAAT3|ENSG00000176485.13|phospholipase A and acyltransferase 3
hg38_v1_chr8_-_109680812_109681005	0.418209	LHX3	ENST00000528716.5|SYBU|ENSG00000147642.17|syntabulin	ENST00000527600.5|SYBU|ENSG00000147642.17|syntabulin	ENST00000531230.5|SYBU|ENSG00000147642.17|syntabulin	ENST00000532189.5|SYBU|ENSG00000147642.17|syntabulin	ENST00000534184.5|SYBU|ENSG00000147642.17|syntabulin	ENST00000408889.7|SYBU|ENSG00000147642.17|syntabulin	ENST00000533171.5|SYBU|ENSG00000147642.17|syntabulin
hg38_v1_chr19_+_48695952_48696039	0.378753	LHX3	ENST00000522966.2|FUT2|ENSG00000176920.13|fucosyltransferase 2	ENST00000425340.3|FUT2|ENSG00000176920.13|fucosyltransferase 2	ENST00000391876.5|FUT2|ENSG00000176920.13|fucosyltransferase 2
hg38_v1_chr11_+_26994102_26994134	0.321177	LHX3	ENST00000318627.4|FIBIN|ENSG00000176971.4|fin bud initiation factor homolog
hg38_v1_chr19_+_49513154_49513274	0.30335	LHX3	ENST00000426395.7|FCGRT|ENSG00000104870.13|Fc fragment of IgG receptor and transporter	ENST00000600273.5|FCGRT|ENSG00000104870.13|Fc fragment of IgG receptor and transporter	ENST00000599988.5|FCGRT|ENSG00000104870.13|Fc fragment of IgG receptor and transporter
hg38_v1_chrX_-_13817027_13817105	0.280285	LHX3	ENST00000493677.5|GPM6B|ENSG00000046653.15|glycoprotein M6B	ENST00000355135.6|GPM6B|ENSG00000046653.15|glycoprotein M6B	ENST00000316715.9|GPM6B|ENSG00000046653.15|glycoprotein M6B
hg38_v1_chr16_-_28623560_28623586	0.279333	LHX3	ENST00000350842.8|SULT1A1|ENSG00000196502.12|sulfotransferase family 1A member 1
hg38_v1_chr19_+_49513353_49513400	0.275762	LHX3	ENST00000596975.5|FCGRT|ENSG00000104870.13|Fc fragment of IgG receptor and transporter
hg38_v1_chr9_+_72577369_72577369	0.272652	LHX3	ENST00000651183.1|TMC1|ENSG00000165091.18|transmembrane channel like 1
hg38_v1_chr1_+_81306096_81306191	0.270326	LHX3	ENST00000370721.5|ADGRL2|ENSG00000117114.20|adhesion G protein-coupled receptor L2	ENST00000370727.5|ADGRL2|ENSG00000117114.20|adhesion G protein-coupled receptor L2	ENST00000370725.5|ADGRL2|ENSG00000117114.20|adhesion G protein-coupled receptor L2	ENST00000370723.5|ADGRL2|ENSG00000117114.20|adhesion G protein-coupled receptor L2	ENST00000370728.5|ADGRL2|ENSG00000117114.20|adhesion G protein-coupled receptor L2	ENST00000370730.5|ADGRL2|ENSG00000117114.20|adhesion G protein-coupled receptor L2
hg38_v1_chr19_-_48646155_48646202	0.270021	LHX3	ENST00000084798.9|CA11|ENSG00000063180.9|carbonic anhydrase 11
hg38_v1_chr18_-_55423757_55423841	0.261884	LHX3	ENST00000675707.1|TCF4|ENSG00000196628.20|transcription factor 4
hg38_v1_chr9_+_72577788_72577788	0.260085	LHX3	ENST00000645208.2|TMC1|ENSG00000165091.18|transmembrane channel like 1
hg38_v1_chr15_-_55408245_55408394	0.258959	LHX3	ENST00000563171.5|CCPG1|ENSG00000260916.8|cell cycle progression 1	ENST00000425574.7|CCPG1|ENSG00000260916.8|cell cycle progression 1	ENST00000442196.8|CCPG1|ENSG00000260916.8|cell cycle progression 1	ENST00000564092.1|CCPG1|ENSG00000260916.8|cell cycle progression 1
hg38_v1_chr10_+_87357720_87357744	0.254608	LHX3	ENST00000412718.3|NUTM2D|ENSG00000214562.15|NUT family member 2D	ENST00000381697.7|NUTM2D|ENSG00000214562.15|NUT family member 2D
hg38_v1_chr8_-_109974688_109974730	0.24573	LHX3	ENST00000297404.1|KCNV1|ENSG00000164794.9|potassium voltage-gated channel modifier subfamily V member 1
hg38_v1_chr5_+_68290637_68290702	0.245516	LHX3	ENST00000336483.9|PIK3R1|ENSG00000145675.15|phosphoinositide-3-kinase regulatory subunit 1
hg38_v1_chr1_-_158426237_158426237	0.243605	LHX3	ENST00000641042.1|OR10K2|ENSG00000180708.6|olfactory receptor family 10 subfamily K member 2
hg38_v1_chr4_-_23890035_23890063	0.243379	LHX3	ENST00000507380.1|PPARGC1A|ENSG00000109819.9|PPARG coactivator 1 alpha	ENST00000264867.7|PPARGC1A|ENSG00000109819.9|PPARG coactivator 1 alpha
hg38_v1_chr1_+_244051275_244051291	0.239745	LHX3	ENST00000358704.4|ZBTB18|ENSG00000179456.10|zinc finger and BTB domain containing 18
hg38_v1_chr16_-_28623330_28623380	0.239271	LHX3	ENST00000677940.1|ENSG00000288656.1|ENSG00000288656.1|novel protein
hg38_v1_chr17_+_1771688_1771751	0.237903	LHX3	ENST00000572048.1|SERPINF1|ENSG00000132386.11|serpin family F member 1	ENST00000573763.1|SERPINF1|ENSG00000132386.11|serpin family F member 1
hg38_v1_chr19_+_14583076_14583126	0.237383	LHX3	ENST00000547437.5|CLEC17A|ENSG00000187912.12|C-type lectin domain containing 17A	ENST00000417570.6|CLEC17A|ENSG00000187912.12|C-type lectin domain containing 17A
hg38_v1_chr18_-_55635948_55636027	0.226208	LHX3	ENST00000565124.4|TCF4|ENSG00000196628.20|transcription factor 4	ENST00000398339.5|TCF4|ENSG00000196628.20|transcription factor 4
hg38_v1_chr1_+_115029823_115029829	0.221287	LHX3	ENST00000256592.3|TSHB|ENSG00000134200.4|thyroid stimulating hormone subunit beta
hg38_v1_chrX_+_109535775_109535786	0.218839	LHX3	ENST00000218004.5|NXT2|ENSG00000101888.12|nuclear transport factor 2 like export factor 2
hg38_v1_chr2_+_26401909_26401942	0.216048	LHX3	ENST00000288710.7|DRC1|ENSG00000157856.12|dynein regulatory complex subunit 1
hg38_v1_chr9_+_122371014_122371030	0.214231	LHX3	ENST00000362012.7|PTGS1|ENSG00000095303.17|prostaglandin-endoperoxide synthase 1
hg38_v1_chr4_+_186069144_186069188	0.211257	LHX3	ENST00000513189.1|TLR3|ENSG00000164342.13|toll like receptor 3	ENST00000296795.8|TLR3|ENSG00000164342.13|toll like receptor 3
hg38_v1_chr9_+_79573162_79573262	0.206634	LHX3	ENST00000425506.5|TLE4|ENSG00000106829.20|TLE family member 4, transcriptional corepressor
hg38_v1_chr15_+_64387828_64387865	0.203752	LHX3	ENST00000261884.8|TRIP4|ENSG00000103671.10|thyroid hormone receptor interactor 4
hg38_v1_chr18_+_74534594_74534610	0.200106	LHX3	ENST00000582365.1|CNDP1|ENSG00000150656.15|carnosine dipeptidase 1
hg38_v1_chr1_-_182671902_182671933	0.199934	LHX3	ENST00000483095.6|RGS8|ENSG00000135824.12|regulator of G protein signaling 8
hg38_v1_chr18_+_74534493_74534506	0.196496	LHX3	ENST00000358821.8|CNDP1|ENSG00000150656.15|carnosine dipeptidase 1
hg38_v1_chr2_+_233917371_233917398	0.194457	LHX3	ENST00000324695.9|TRPM8|ENSG00000144481.17|transient receptor potential cation channel subfamily M member 8	ENST00000433712.6|TRPM8|ENSG00000144481.17|transient receptor potential cation channel subfamily M member 8
hg38_v1_chr1_-_182671853_182671898	0.194162	LHX3	ENST00000367556.5|RGS8|ENSG00000135824.12|regulator of G protein signaling 8
hg38_v1_chr15_-_75455767_75455785	0.192216	LHX3	ENST00000360439.8|SIN3A|ENSG00000169375.16|SIN3 transcription regulator family member A
hg38_v1_chr2_-_96505345_96505363	0.186507	LHX3	ENST00000310865.7|NEURL3|ENSG00000163121.10|neuralized E3 ubiquitin protein ligase 3	ENST00000451794.6|NEURL3|ENSG00000163121.10|neuralized E3 ubiquitin protein ligase 3
hg38_v1_chr20_+_6007245_6007264	0.185958	LHX3	ENST00000378868.4|CRLS1|ENSG00000088766.12|cardiolipin synthase 1
hg38_v1_chr9_-_113303271_113303376	0.176155	LHX3	ENST00000297894.5|RNF183|ENSG00000165188.14|ring finger protein 183	ENST00000489339.2|RNF183|ENSG00000165188.14|ring finger protein 183
hg38_v1_chr1_-_56819365_56819420	0.174302	LHX3	ENST00000343433.7|FYB2|ENSG00000187889.13|FYN binding protein 2
hg38_v1_chr1_-_48400826_48400863	0.173704	LHX3	ENST00000371841.1|SPATA6|ENSG00000132122.12|spermatogenesis associated 6
hg38_v1_chr8_+_106726115_106726185	0.172728	LHX3	ENST00000521592.5|OXR1|ENSG00000164830.19|oxidation resistance 1
hg38_v1_chr7_+_90383672_90383721	0.171724	LHX3	ENST00000416322.5|CLDN12|ENSG00000157224.16|claudin 12
hg38_v1_chr13_-_49401497_49401599	0.169744	LHX3	ENST00000457041.5|CAB39L|ENSG00000102547.19|calcium binding protein 39 like	ENST00000355854.8|CAB39L|ENSG00000102547.19|calcium binding protein 39 like
hg38_v1_chr10_-_27240505_27240631	0.168967	LHX3	ENST00000375888.5|ACBD5|ENSG00000107897.20|acyl-CoA binding domain containing 5	ENST00000676732.1|ACBD5|ENSG00000107897.20|acyl-CoA binding domain containing 5
hg38_v1_chr12_-_118190510_118190566	0.168618	LHX3	ENST00000540561.5|TAOK3|ENSG00000135090.14|TAO kinase 3	ENST00000537952.1|TAOK3|ENSG00000135090.14|TAO kinase 3	ENST00000537822.1|TAOK3|ENSG00000135090.14|TAO kinase 3
hg38_v1_chr5_+_141177790_141177849	0.168203	LHX3	ENST00000239444.4|PCDHB8|ENSG00000120322.4|protocadherin beta 8	ENST00000623995.1|ENSG00000279472.1|ENSG00000279472.1|novel transcript
hg38_v1_chr19_-_43465596_43465616	0.165356	LHX3	ENST00000244333.4|LYPD3|ENSG00000124466.9|LY6/PLAUR domain containing 3
hg38_v1_chr7_-_36724543_36724552	0.163361	LHX3	ENST00000612871.4|AOAH|ENSG00000136250.12|acyloxyacyl hydrolase
hg38_v1_chr7_-_36724457_36724520	0.162179	LHX3	ENST00000617537.5|AOAH|ENSG00000136250.12|acyloxyacyl hydrolase	ENST00000435386.1|AOAH|ENSG00000136250.12|acyloxyacyl hydrolase
hg38_v1_chr10_+_47918659_47918739	0.162173	LHX3	ENST00000576178.6|NPY4R2|ENSG00000264717.5|neuropeptide Y receptor Y4-2	ENST00000613306.1|NPY4R2|ENSG00000264717.5|neuropeptide Y receptor Y4-2
hg38_v1_chr19_-_11346486_11346518	0.159017	LHX3	ENST00000590482.5|TMEM205|ENSG00000105518.14|transmembrane protein 205
hg38_v1_chr3_-_191282383_191282420	0.152826	LHX3	ENST00000427544.6|UTS2B|ENSG00000188958.9|urotensin 2B
hg38_v1_chr12_-_52367478_52367483	0.151704	LHX3	ENST00000257901.7|KRT85|ENSG00000135443.8|keratin 85
hg38_v1_chr2_-_98663464_98663478	0.148523	LHX3	ENST00000414521.6|MGAT4A|ENSG00000071073.13|alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A
hg38_v1_chrM_-_14669_14675	0.141246	LHX3	ENST00000361681.2|MT-ND6|ENSG00000198695.2|mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6
hg38_v1_chr9_+_69145463_69145590	0.140586	LHX3	ENST00000636438.1|TJP2|ENSG00000119139.21|tight junction protein 2
hg38_v1_chr3_-_132684685_132684770	0.140181	LHX3	ENST00000512094.5|NPHP3|ENSG00000113971.21|nephrocystin 3	ENST00000632629.1|NPHP3-ACAD11|ENSG00000274810.4|NPHP3-ACAD11 readthrough (NMD candidate)
hg38_v1_chr17_-_10469558_10469559	0.136139	LHX3	ENST00000255381.2|MYH4|ENSG00000264424.1|myosin heavy chain 4
hg38_v1_chrX_+_106168297_106168350	0.13307	LHX3	ENST00000337685.6|PWWP3B|ENSG00000157502.13|PWWP domain containing 3B	ENST00000357175.6|PWWP3B|ENSG00000157502.13|PWWP domain containing 3B
hg38_v1_chr6_-_49744378_49744394	0.127778	LHX3	ENST00000371159.8|CRISP3|ENSG00000096006.12|cysteine rich secretory protein 3	ENST00000263045.9|CRISP3|ENSG00000096006.12|cysteine rich secretory protein 3
hg38_v1_chr20_+_31475278_31475314	0.127501	LHX3	ENST00000201979.3|REM1|ENSG00000088320.4|RRAD and GEM like GTPase 1
hg38_v1_chr6_-_49744434_49744445	0.121529	LHX3	ENST00000433368.6|CRISP3|ENSG00000096006.12|cysteine rich secretory protein 3	ENST00000354620.4|CRISP3|ENSG00000096006.12|cysteine rich secretory protein 3
hg38_v1_chr8_-_18083278_18083408	0.121107	LHX3	ENST00000636691.1|ASAH1|ENSG00000104763.20|N-acylsphingosine amidohydrolase 1
hg38_v1_chr9_+_72577939_72577939	0.117418	LHX3	ENST00000645773.1|TMC1|ENSG00000165091.18|transmembrane channel like 1
hg38_v1_chr11_-_129024157_129024226	0.116847	LHX3	ENST00000392657.7|ARHGAP32|ENSG00000134909.19|Rho GTPase activating protein 32
hg38_v1_chr8_+_104339796_104339833	0.114838	LHX3	ENST00000622554.1|DCSTAMP|ENSG00000164935.6|dendrocyte expressed seven transmembrane protein	ENST00000297581.2|DCSTAMP|ENSG00000164935.6|dendrocyte expressed seven transmembrane protein
hg38_v1_chr14_+_61697622_61697717	0.113133	LHX3	ENST00000539097.2|HIF1A|ENSG00000100644.17|hypoxia inducible factor 1 subunit alpha
hg38_v1_chr20_+_45416551_45416636	0.11279	LHX3	ENST00000639292.1|PIGT|ENSG00000124155.18|phosphatidylinositol glycan anchor biosynthesis class T
hg38_v1_chr20_-_31475125_31475163	0.112424	LHX3	ENST00000317676.3|DEFB124|ENSG00000180383.4|defensin beta 124
hg38_v1_chr17_+_70075317_70075340	0.106689	LHX3	ENST00000589377.1|KCNJ16|ENSG00000153822.15|potassium inwardly rectifying channel subfamily J member 16
hg38_v1_chr19_+_11346499_11346548	0.106084	LHX3	ENST00000458408.6|CCDC159|ENSG00000183401.12|coiled-coil domain containing 159	ENST00000586451.5|CCDC159|ENSG00000183401.12|coiled-coil domain containing 159	ENST00000588592.5|CCDC159|ENSG00000183401.12|coiled-coil domain containing 159
hg38_v1_chr8_-_79767462_79767776	0.104915	LHX3	ENST00000674295.1|HEY1|ENSG00000164683.18|hes related family bHLH transcription factor with YRPW motif 1	ENST00000518733.1|HEY1|ENSG00000164683.18|hes related family bHLH transcription factor with YRPW motif 1	ENST00000674418.1|HEY1|ENSG00000164683.18|hes related family bHLH transcription factor with YRPW motif 1	ENST00000674358.1|HEY1|ENSG00000164683.18|hes related family bHLH transcription factor with YRPW motif 1	ENST00000354724.8|HEY1|ENSG00000164683.18|hes related family bHLH transcription factor with YRPW motif 1
hg38_v1_chr10_-_114144599_114144619	0.103991	LHX3	ENST00000428953.1|CCDC186|ENSG00000165813.20|coiled-coil domain containing 186
hg38_v1_chr8_-_131040890_131040921	0.102766	LHX3	ENST00000286355.10|ADCY8|ENSG00000155897.10|adenylate cyclase 8
hg38_v1_chr2_-_99255107_99255282	0.102066	LHX3	ENST00000333017.6|LYG2|ENSG00000185674.9|lysozyme g2	ENST00000626374.2|LYG2|ENSG00000185674.9|lysozyme g2	ENST00000409679.5|LYG2|ENSG00000185674.9|lysozyme g2	ENST00000423306.1|LYG2|ENSG00000185674.9|lysozyme g2
hg38_v1_chr7_+_92057602_92057638	0.0994926	LHX3	ENST00000491695.2|AKAP9|ENSG00000127914.19|A-kinase anchoring protein 9
hg38_v1_chr3_-_142000353_142000373	0.0987524	LHX3	ENST00000499676.5|TFDP2|ENSG00000114126.18|transcription factor Dp-2
hg38_v1_chr3_+_46877705_46877740	0.0967111	LHX3	ENST00000449590.6|PTH1R|ENSG00000160801.14|parathyroid hormone 1 receptor
hg38_v1_chr4_-_86357722_86357895	0.0947316	LHX3	ENST00000641341.1|MAPK10|ENSG00000109339.24|mitogen-activated protein kinase 10	ENST00000642038.1|MAPK10|ENSG00000109339.24|mitogen-activated protein kinase 10	ENST00000641116.1|MAPK10|ENSG00000109339.24|mitogen-activated protein kinase 10	ENST00000641767.1|MAPK10|ENSG00000109339.24|mitogen-activated protein kinase 10	ENST00000639242.1|MAPK10|ENSG00000109339.24|mitogen-activated protein kinase 10	ENST00000638313.1|MAPK10|ENSG00000109339.24|mitogen-activated protein kinase 10
hg38_v1_chr16_+_67570741_67570774	0.0863421	LHX3	ENST00000644753.1|CTCF|ENSG00000102974.16|CCCTC-binding factor	ENST00000642819.1|CTCF|ENSG00000102974.16|CCCTC-binding factor	ENST00000645306.1|CTCF|ENSG00000102974.16|CCCTC-binding factor
hg38_v1_chr17_-_66229380_66229422	0.0827609	LHX3	ENST00000205948.11|APOH|ENSG00000091583.11|apolipoprotein H
hg38_v1_chr7_+_107583919_107583946	0.0792452	LHX3	ENST00000491150.5|BCAP29|ENSG00000075790.12|B cell receptor associated protein 29
hg38_v1_chr1_-_23799561_23799572	0.0753031	LHX3	ENST00000445705.1|GALE|ENSG00000117308.15|UDP-galactose-4-epimerase
hg38_v1_chr4_+_53377630_53377707	0.0718906	LHX3	ENST00000337488.11|FIP1L1|ENSG00000145216.16|factor interacting with PAPOLA and CPSF1	ENST00000358575.9|FIP1L1|ENSG00000145216.16|factor interacting with PAPOLA and CPSF1	ENST00000507922.5|FIP1L1|ENSG00000145216.16|factor interacting with PAPOLA and CPSF1	ENST00000306932.10|FIP1L1|ENSG00000145216.16|factor interacting with PAPOLA and CPSF1
hg38_v1_chr10_-_88851809_88851851	0.0711551	LHX3	ENST00000371930.5|ANKRD22|ENSG00000152766.6|ankyrin repeat domain 22
hg38_v1_chr15_+_48191648_48191765	0.0703079	LHX3	ENST00000646012.1|SLC12A1|ENSG00000074803.20|solute carrier family 12 member 1	ENST00000561127.5|SLC12A1|ENSG00000074803.20|solute carrier family 12 member 1	ENST00000417307.3|CTXN2|ENSG00000233932.6|cortexin 2	ENST00000647546.1|SLC12A1|ENSG00000074803.20|solute carrier family 12 member 1	ENST00000559641.5|SLC12A1|ENSG00000074803.20|solute carrier family 12 member 1
hg38_v1_chr6_+_72216442_72216542	0.0688869	LHX3	ENST00000425662.6|RIMS1|ENSG00000079841.18|regulating synaptic membrane exocytosis 1	ENST00000453976.6|RIMS1|ENSG00000079841.18|regulating synaptic membrane exocytosis 1
hg38_v1_chr18_-_3845321_3845371	0.0678155	LHX3	ENST00000539435.5|DLGAP1|ENSG00000170579.17|DLG associated protein 1	ENST00000400147.6|DLGAP1|ENSG00000170579.17|DLG associated protein 1
hg38_v1_chr10_+_18260715_18260769	0.0673839	LHX3	ENST00000615785.4|CACNB2|ENSG00000165995.22|calcium voltage-gated channel auxiliary subunit beta 2	ENST00000617363.4|CACNB2|ENSG00000165995.22|calcium voltage-gated channel auxiliary subunit beta 2	ENST00000396576.6|CACNB2|ENSG00000165995.22|calcium voltage-gated channel auxiliary subunit beta 2
hg38_v1_chr12_-_86256299_86256316	0.0664257	LHX3	ENST00000552808.6|MGAT4C|ENSG00000182050.13|MGAT4 family member C	ENST00000547225.5|MGAT4C|ENSG00000182050.13|MGAT4 family member C
hg38_v1_chr8_-_25424260_25424264	0.0644024	LHX3	ENST00000421054.7|GNRH1|ENSG00000147437.10|gonadotropin releasing hormone 1
hg38_v1_chr22_+_23145366_23145520	0.0623337	LHX3	ENST00000341989.9|RAB36|ENSG00000100228.14|RAB36, member RAS oncogene family	ENST00000263116.8|RAB36|ENSG00000100228.14|RAB36, member RAS oncogene family
hg38_v1_chr17_+_46511511_46511511	0.0605941	LHX3	ENST00000576629.5|LRRC37A2|ENSG00000238083.8|leucine rich repeat containing 37 member A2
hg38_v1_chrX_+_85003863_85003910	0.0586183	LHX3	ENST00000373173.7|APOOL|ENSG00000155008.15|apolipoprotein O like
hg38_v1_chr12_+_49346911_49347038	0.0576567	LHX3	ENST00000395069.3|DNAJC22|ENSG00000178401.16|DnaJ heat shock protein family (Hsp40) member C22
hg38_v1_chr14_+_19743571_19743571	0.0576041	LHX3	ENST00000642117.2|OR4Q3|ENSG00000182652.4|olfactory receptor family 4 subfamily Q member 3
hg38_v1_chr5_+_55853314_55853372	0.0574071	LHX3	ENST00000354961.8|IL31RA|ENSG00000164509.16|interleukin 31 receptor A	ENST00000297015.7|IL31RA|ENSG00000164509.16|interleukin 31 receptor A
hg38_v1_chr3_-_47475811_47475961	0.0558058	LHX3	ENST00000265565.10|SCAP|ENSG00000114650.20|SREBF chaperone	ENST00000428413.5|SCAP|ENSG00000114650.20|SREBF chaperone
hg38_v1_chr18_+_58341038_58341054	0.0538439	LHX3	ENST00000679791.1|NEDD4L|ENSG00000049759.20|NEDD4 like E3 ubiquitin protein ligase
hg38_v1_chr19_-_6279921_6279989	0.0520202	LHX3	ENST00000252674.9|MLLT1|ENSG00000130382.9|MLLT1 super elongation complex subunit
hg38_v1_chr7_+_138460238_138460271	0.0492112	LHX3	ENST00000343526.9|TRIM24|ENSG00000122779.18|tripartite motif containing 24
hg38_v1_chr6_-_159045104_159045152	0.0489324	LHX3	ENST00000326965.7|TAGAP|ENSG00000164691.18|T cell activation RhoGTPase activating protein
hg38_v1_chr4_+_112647059_112647211	0.0461103	LHX3	ENST00000511529.1|LARP7|ENSG00000174720.16|La ribonucleoprotein 7, transcriptional regulator
hg38_v1_chr4_+_41935114_41935195	0.0454646	LHX3	ENST00000508448.5|TMEM33|ENSG00000109133.13|transmembrane protein 33	ENST00000513702.5|TMEM33|ENSG00000109133.13|transmembrane protein 33	ENST00000325094.9|TMEM33|ENSG00000109133.13|transmembrane protein 33
hg38_v1_chr3_-_12545499_12545499	0.0443793	LHX3	ENST00000564146.4|MKRN2OS|ENSG00000225526.6|MKRN2 opposite strand
hg38_v1_chr3_+_69763726_69763811	0.0438891	LHX3	ENST00000448226.9|MITF|ENSG00000187098.17|melanocyte inducing transcription factor
hg38_v1_chr5_+_141150012_141150102	0.0436585	LHX3	ENST00000231136.4|PCDHB6|ENSG00000113211.6|protocadherin beta 6	ENST00000622991.1|PCDHB6|ENSG00000113211.6|protocadherin beta 6
hg38_v1_chr8_-_56211257_56211309	0.0419192	LHX3	ENST00000316981.8|PLAG1|ENSG00000181690.8|PLAG1 zinc finger	ENST00000423799.6|PLAG1|ENSG00000181690.8|PLAG1 zinc finger	ENST00000429357.2|PLAG1|ENSG00000181690.8|PLAG1 zinc finger
hg38_v1_chr3_+_158110052_158110127	0.0370713	LHX3	ENST00000295930.7|RSRC1|ENSG00000174891.14|arginine and serine rich coiled-coil 1	ENST00000471994.5|RSRC1|ENSG00000174891.14|arginine and serine rich coiled-coil 1	ENST00000482822.3|RSRC1|ENSG00000174891.14|arginine and serine rich coiled-coil 1	ENST00000476899.6|RSRC1|ENSG00000174891.14|arginine and serine rich coiled-coil 1	ENST00000683899.1|RSRC1|ENSG00000174891.14|arginine and serine rich coiled-coil 1	ENST00000684604.1|RSRC1|ENSG00000174891.14|arginine and serine rich coiled-coil 1	ENST00000682164.1|RSRC1|ENSG00000174891.14|arginine and serine rich coiled-coil 1	ENST00000464171.5|RSRC1|ENSG00000174891.14|arginine and serine rich coiled-coil 1	ENST00000611884.5|RSRC1|ENSG00000174891.14|arginine and serine rich coiled-coil 1	ENST00000312179.10|RSRC1|ENSG00000174891.14|arginine and serine rich coiled-coil 1	ENST00000475278.6|RSRC1|ENSG00000174891.14|arginine and serine rich coiled-coil 1
hg38_v1_chr18_-_24272179_24272241	0.0352753	LHX3	ENST00000399443.7|OSBPL1A|ENSG00000141447.18|oxysterol binding protein like 1A
hg38_v1_chr1_-_23799533_23799559	0.0347961	LHX3	ENST00000429356.5|GALE|ENSG00000117308.15|UDP-galactose-4-epimerase
hg38_v1_chr2_+_134838610_134838623	0.0346947	LHX3	ENST00000356140.10|ACMSD|ENSG00000153086.14|aminocarboxymuconate semialdehyde decarboxylase	ENST00000392928.5|ACMSD|ENSG00000153086.14|aminocarboxymuconate semialdehyde decarboxylase
hg38_v1_chr4_+_70592253_70592258	0.032014	LHX3	ENST00000322937.10|AMBN|ENSG00000178522.14|ameloblastin	ENST00000613447.4|AMBN|ENSG00000178522.14|ameloblastin
hg38_v1_chr4_+_41613476_41613522	0.0312833	LHX3	ENST00000508466.1|LIMCH1|ENSG00000064042.18|LIM and calponin homology domains 1
hg38_v1_chrM_+_10055_10067	0.0308711	LHX3	ENST00000361227.2|MT-ND3|ENSG00000198840.2|mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 3
hg38_v1_chr16_+_28553908_28553936	0.0292678	LHX3	ENST00000317058.8|SGF29|ENSG00000176476.9|SAGA complex associated factor 29
hg38_v1_chr9_+_122371036_122371080	0.0287653	LHX3	ENST00000619306.5|PTGS1|ENSG00000095303.17|prostaglandin-endoperoxide synthase 1	ENST00000426608.6|PTGS1|ENSG00000095303.17|prostaglandin-endoperoxide synthase 1	ENST00000223423.8|PTGS1|ENSG00000095303.17|prostaglandin-endoperoxide synthase 1
hg38_v1_chr7_-_25228485_25228487	0.0276294	LHX3	ENST00000222674.2|NPVF|ENSG00000105954.2|neuropeptide VF precursor
hg38_v1_chr2_-_187448244_187448259	0.0234217	LHX3	ENST00000392370.8|CALCRL|ENSG00000064989.13|calcitonin receptor like receptor	ENST00000410068.5|CALCRL|ENSG00000064989.13|calcitonin receptor like receptor	ENST00000447403.5|CALCRL|ENSG00000064989.13|calcitonin receptor like receptor	ENST00000410102.5|CALCRL|ENSG00000064989.13|calcitonin receptor like receptor
hg38_v1_chr5_-_79514127_79514143	0.0222219	LHX3	ENST00000334082.11|HOMER1|ENSG00000152413.15|homer scaffold protein 1
hg38_v1_chr16_+_15395745_15395769	0.021017	LHX3	ENST00000287594.7|MPV17L|ENSG00000156968.9|MPV17 mitochondrial inner membrane protein like	ENST00000396385.4|MPV17L|ENSG00000156968.9|MPV17 mitochondrial inner membrane protein like	ENST00000568766.1|ENSG00000261130.5|ENSG00000261130.5|novel protein
hg38_v1_chr11_-_790062_790128	0.0200293	LHX3	ENST00000330106.5|CEND1|ENSG00000184524.6|cell cycle exit and neuronal differentiation 1
hg38_v1_chr1_-_92486916_92486932	0.01944	LHX3	ENST00000294702.6|GFI1|ENSG00000162676.12|growth factor independent 1 transcriptional repressor
hg38_v1_chr19_+_9185594_9185594	0.0193953	LHX3	ENST00000344248.4|OR7D2|ENSG00000188000.6|olfactory receptor family 7 subfamily D member 2
hg38_v1_chr6_+_82363199_82363229	0.0186894	LHX3	ENST00000535040.4|TPBG|ENSG00000146242.9|trophoblast glycoprotein
hg38_v1_chr7_-_123199960_123199975	0.0139345	LHX3	ENST00000194130.7|SLC13A1|ENSG00000081800.9|solute carrier family 13 member 1
hg38_v1_chr3_-_20012250_20012267	0.0118786	LHX3	ENST00000389050.5|PP2D1|ENSG00000183977.14|protein phosphatase 2C like domain containing 1
hg38_v1_chr5_-_16916400_16916527	0.0111528	LHX3	ENST00000513882.5|MYO10|ENSG00000145555.15|myosin X
hg38_v1_chr6_+_130018565_130018600	0.0109535	LHX3	ENST00000361794.7|L3MBTL3|ENSG00000198945.8|L3MBTL histone methyl-lysine binding protein 3	ENST00000526087.5|L3MBTL3|ENSG00000198945.8|L3MBTL histone methyl-lysine binding protein 3	ENST00000533560.5|L3MBTL3|ENSG00000198945.8|L3MBTL histone methyl-lysine binding protein 3
hg38_v1_chr3_-_165078480_165078502	0.00925695	LHX3	ENST00000264382.8|SI|ENSG00000090402.8|sucrase-isomaltase
hg38_v1_chr7_+_30145789_30145802	0.00824092	LHX3	ENST00000324489.5|MTURN|ENSG00000180354.16|maturin, neural progenitor differentiation regulator homolog
hg38_v1_chr1_-_230869564_230869601	0.00681712	LHX3	ENST00000470540.5|C1orf198|ENSG00000119280.17|chromosome 1 open reading frame 198
hg38_v1_chr17_-_44066595_44066688	0.00645543	LHX3	ENST00000585388.2|LSM12|ENSG00000161654.10|LSM12 homolog	ENST00000293406.8|LSM12|ENSG00000161654.10|LSM12 homolog
hg38_v1_chr8_+_91249307_91249327	0.0044915	LHX3	ENST00000309536.6|SLC26A7|ENSG00000147606.9|solute carrier family 26 member 7	ENST00000276609.8|SLC26A7|ENSG00000147606.9|solute carrier family 26 member 7
hg38_v1_chr4_+_157220691_157220743	0.00441842	LHX3	ENST00000509417.5|GRIA2|ENSG00000120251.21|glutamate ionotropic receptor AMPA type subunit 2	ENST00000645636.1|GRIA2|ENSG00000120251.21|glutamate ionotropic receptor AMPA type subunit 2	ENST00000296526.12|GRIA2|ENSG00000120251.21|glutamate ionotropic receptor AMPA type subunit 2	ENST00000264426.14|GRIA2|ENSG00000120251.21|glutamate ionotropic receptor AMPA type subunit 2
hg38_v1_chr1_+_15341744_15341774	0.00428563	LHX3	ENST00000444385.5|FHAD1|ENSG00000142621.20|forkhead associated phosphopeptide binding domain 1
