ISMARA results: AACCUGG

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GSE58827: Dynamics of the Mouse Liver

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Results for AACCUGG

Z-value: 0.09

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miRNA associated with seed AACCUGG

Name	miRBASE accession
mmu-miR-490-3p miRBase	MIMAT0003780

Activity profile of AACCUGG motif

Sorted Z-values of AACCUGG motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chrX_+_42149288 Show fit	0.10	ENSMUST00000115073.2 ENSMUST00000115072.1	Stag2 Ensembl NCBI MGI UniProt Show fit	stromal antigen 2
chr2_+_79255500 Show fit	0.09	ENSMUST00000099972.4	Itga4 Ensembl NCBI MGI UniProt Show fit	integrin alpha 4
chr15_+_103240405 Show fit	0.08	ENSMUST00000036004.9 ENSMUST00000087351.7	Hnrnpa1 Ensembl NCBI MGI UniProt Show fit	heterogeneous nuclear ribonucleoprotein A1
chr2_+_75659253 Show fit	0.07	ENSMUST00000111964.1 ENSMUST00000111962.1 ENSMUST00000111961.1 ENSMUST00000164947.2 ENSMUST00000090792.4	Hnrnpa3 Ensembl NCBI MGI UniProt Show fit	heterogeneous nuclear ribonucleoprotein A3
chr1_-_143702832 Show fit	0.06	ENSMUST00000018337.7	Cdc73 Ensembl NCBI MGI UniProt Show fit	cell division cycle 73, Paf1/RNA polymerase II complex component
chr6_-_39206782 Show fit	0.06	ENSMUST00000002305.8	Jhdm1d Ensembl NCBI MGI UniProt Show fit	jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
chr2_-_37647199 Show fit	0.03	ENSMUST00000028279.3	Strbp Ensembl NCBI MGI UniProt Show fit	spermatid perinuclear RNA binding protein
chr5_-_20951769 Show fit	0.03	ENSMUST00000036489.5	Rsbn1l Ensembl NCBI MGI UniProt Show fit	round spermatid basic protein 1-like
chr13_+_41606216 Show fit	0.03	ENSMUST00000129449.1	Tmem170b Ensembl NCBI MGI UniProt Show fit	transmembrane protein 170B
chr5_+_108268897 Show fit	0.02	ENSMUST00000031190.4	Dr1 Ensembl NCBI MGI UniProt Show fit	down-regulator of transcription 1

Showing 1 to 10 of 29 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of AACCUGG

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0050904	diapedesis(GO:0050904)
0.0	0.1	GO:0032876	negative regulation of DNA endoreduplication(GO:0032876)

Showing 1 to 2 of 2 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0019960	C-X3-C chemokine binding(GO:0019960)
0.0	0.1	GO:0051032	nucleic acid transmembrane transporter activity(GO:0051032) RNA transmembrane transporter activity(GO:0051033)

Showing 1 to 2 of 2 entries