GSE58827: Dynamics of the Mouse Liver
Gene Symbol | Gene ID | Gene Info |
---|---|---|
Evx2
|
ENSMUSG00000001815.9 | even-skipped homeobox 2 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Evx2 | mm10_v2_chr2_-_74659861_74659861 | 0.07 | 6.9e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_+_172555932 | 1.82 |
ENSMUST00000061835.3
|
Vsig8
|
V-set and immunoglobulin domain containing 8 |
chr1_+_91801453 | 0.98 |
ENSMUST00000007949.3
|
Twist2
|
twist basic helix-loop-helix transcription factor 2 |
chr3_-_15575065 | 0.84 |
ENSMUST00000091319.4
|
Sirpb1b
|
signal-regulatory protein beta 1B |
chr6_-_69400097 | 0.84 |
ENSMUST00000177795.1
|
Igkv4-62
|
immunoglobulin kappa variable 4-62 |
chr16_-_38800193 | 0.81 |
ENSMUST00000057767.4
|
Upk1b
|
uroplakin 1B |
chr6_+_116650674 | 0.79 |
ENSMUST00000067354.5
ENSMUST00000178241.1 |
8430408G22Rik
|
RIKEN cDNA 8430408G22 gene |
chr2_-_168767029 | 0.76 |
ENSMUST00000075044.3
|
Sall4
|
sal-like 4 (Drosophila) |
chr6_-_69284319 | 0.75 |
ENSMUST00000103349.1
|
Igkv4-69
|
immunoglobulin kappa variable 4-69 |
chr2_-_168767136 | 0.74 |
ENSMUST00000029061.5
ENSMUST00000103074.1 |
Sall4
|
sal-like 4 (Drosophila) |
chr2_+_154548888 | 0.71 |
ENSMUST00000045116.4
ENSMUST00000109709.3 |
1700003F12Rik
|
RIKEN cDNA 1700003F12 gene |
chr7_-_48843663 | 0.55 |
ENSMUST00000167786.2
|
Csrp3
|
cysteine and glycine-rich protein 3 |
chr17_-_47834682 | 0.44 |
ENSMUST00000066368.6
|
Mdfi
|
MyoD family inhibitor |
chr6_-_124779686 | 0.44 |
ENSMUST00000147669.1
ENSMUST00000128697.1 ENSMUST00000032218.3 ENSMUST00000112475.2 |
Lrrc23
|
leucine rich repeat containing 23 |
chr14_-_59365410 | 0.37 |
ENSMUST00000161031.1
ENSMUST00000160425.1 |
Phf11d
|
PHD finger protein 11D |
chr19_+_5088534 | 0.36 |
ENSMUST00000025811.4
|
Yif1a
|
Yip1 interacting factor homolog A (S. cerevisiae) |
chr1_+_36761847 | 0.35 |
ENSMUST00000027291.4
|
Zap70
|
zeta-chain (TCR) associated protein kinase |
chr2_+_164613519 | 0.35 |
ENSMUST00000094346.2
|
Wfdc6b
|
WAP four-disulfide core domain 6B |
chr14_-_59365465 | 0.35 |
ENSMUST00000095157.4
|
Phf11d
|
PHD finger protein 11D |
chr10_-_80701811 | 0.31 |
ENSMUST00000003438.9
|
Mob3a
|
MOB kinase activator 3A |
chr11_+_116843278 | 0.31 |
ENSMUST00000106370.3
|
Mettl23
|
methyltransferase like 23 |
chr4_+_109978004 | 0.28 |
ENSMUST00000061187.3
|
Dmrta2
|
doublesex and mab-3 related transcription factor like family A2 |
chr9_-_107679592 | 0.28 |
ENSMUST00000010205.7
|
Gnat1
|
guanine nucleotide binding protein, alpha transducing 1 |
chrX_-_60893430 | 0.26 |
ENSMUST00000135107.2
|
Sox3
|
SRY-box containing gene 3 |
chr4_-_132345715 | 0.25 |
ENSMUST00000084250.4
|
Rcc1
|
regulator of chromosome condensation 1 |
chr1_-_184999549 | 0.24 |
ENSMUST00000027929.4
|
Mark1
|
MAP/microtubule affinity-regulating kinase 1 |
chr19_-_5560570 | 0.24 |
ENSMUST00000025861.1
|
Ovol1
|
OVO homolog-like 1 (Drosophila) |
chr10_-_128525859 | 0.24 |
ENSMUST00000026427.6
|
Esyt1
|
extended synaptotagmin-like protein 1 |
chr11_-_113709520 | 0.23 |
ENSMUST00000173655.1
ENSMUST00000100248.4 |
Cpsf4l
|
cleavage and polyadenylation specific factor 4-like |
chr4_-_132345686 | 0.23 |
ENSMUST00000030726.6
|
Rcc1
|
regulator of chromosome condensation 1 |
chr2_-_155074447 | 0.23 |
ENSMUST00000137242.1
ENSMUST00000054607.9 |
Ahcy
|
S-adenosylhomocysteine hydrolase |
chr8_+_92855319 | 0.22 |
ENSMUST00000046290.1
|
Lpcat2
|
lysophosphatidylcholine acyltransferase 2 |
chr17_-_36032682 | 0.21 |
ENSMUST00000102678.4
|
H2-T23
|
histocompatibility 2, T region locus 23 |
chr15_+_34453285 | 0.21 |
ENSMUST00000060894.7
|
BC030476
|
cDNA sequence BC030476 |
chr7_-_126800354 | 0.21 |
ENSMUST00000106348.1
|
Aldoa
|
aldolase A, fructose-bisphosphate |
chr18_+_77332394 | 0.20 |
ENSMUST00000148341.1
|
Loxhd1
|
lipoxygenase homology domains 1 |
chr3_-_151835967 | 0.20 |
ENSMUST00000106126.1
|
Ptgfr
|
prostaglandin F receptor |
chr18_-_24603791 | 0.19 |
ENSMUST00000070726.3
|
Slc39a6
|
solute carrier family 39 (metal ion transporter), member 6 |
chr6_+_122626410 | 0.19 |
ENSMUST00000049644.2
|
Dppa3
|
developmental pluripotency-associated 3 |
chr4_+_100478806 | 0.17 |
ENSMUST00000133493.2
ENSMUST00000092730.3 ENSMUST00000106979.3 |
Ube2u
|
ubiquitin-conjugating enzyme E2U (putative) |
chr3_-_130709419 | 0.17 |
ENSMUST00000043937.7
|
Ostc
|
oligosaccharyltransferase complex subunit |
chrX_+_58030622 | 0.17 |
ENSMUST00000088627.4
|
Zic3
|
zinc finger protein of the cerebellum 3 |
chr19_-_55241236 | 0.16 |
ENSMUST00000069183.6
|
Gucy2g
|
guanylate cyclase 2g |
chr18_-_24603464 | 0.16 |
ENSMUST00000154205.1
|
Slc39a6
|
solute carrier family 39 (metal ion transporter), member 6 |
chr19_+_41933464 | 0.16 |
ENSMUST00000026154.7
|
Zdhhc16
|
zinc finger, DHHC domain containing 16 |
chr11_+_35121126 | 0.15 |
ENSMUST00000069837.3
|
Slit3
|
slit homolog 3 (Drosophila) |
chr11_-_113710017 | 0.15 |
ENSMUST00000018871.1
|
Cpsf4l
|
cleavage and polyadenylation specific factor 4-like |
chr10_+_80264942 | 0.15 |
ENSMUST00000105362.1
ENSMUST00000105361.3 |
Dazap1
|
DAZ associated protein 1 |
chr18_+_24603952 | 0.15 |
ENSMUST00000025120.6
|
Elp2
|
elongator acetyltransferase complex subunit 2 |
chr16_-_42340595 | 0.15 |
ENSMUST00000102817.4
|
Gap43
|
growth associated protein 43 |
chr2_+_91256813 | 0.15 |
ENSMUST00000144394.1
ENSMUST00000028694.5 ENSMUST00000168916.1 ENSMUST00000156919.1 |
Pacsin3
|
protein kinase C and casein kinase substrate in neurons 3 |
chrX_-_20950597 | 0.15 |
ENSMUST00000009550.7
|
Elk1
|
ELK1, member of ETS oncogene family |
chr2_+_91257323 | 0.14 |
ENSMUST00000111349.2
ENSMUST00000131711.1 |
Pacsin3
|
protein kinase C and casein kinase substrate in neurons 3 |
chr3_-_15426427 | 0.14 |
ENSMUST00000099201.3
|
Sirpb1a
|
signal-regulatory protein beta 1A |
chr13_+_51645232 | 0.13 |
ENSMUST00000075853.5
|
Cks2
|
CDC28 protein kinase regulatory subunit 2 |
chr2_-_150255591 | 0.13 |
ENSMUST00000063463.5
|
Gm21994
|
predicted gene 21994 |
chrX_+_58030999 | 0.13 |
ENSMUST00000088631.4
ENSMUST00000088629.3 |
Zic3
|
zinc finger protein of the cerebellum 3 |
chr11_-_120378692 | 0.13 |
ENSMUST00000026448.9
|
2310003H01Rik
|
RIKEN cDNA 2310003H01 gene |
chr17_-_49564262 | 0.12 |
ENSMUST00000057610.6
|
Daam2
|
dishevelled associated activator of morphogenesis 2 |
chr12_-_98577940 | 0.12 |
ENSMUST00000110113.1
|
Kcnk10
|
potassium channel, subfamily K, member 10 |
chr15_-_58034289 | 0.12 |
ENSMUST00000100655.3
|
9130401M01Rik
|
RIKEN cDNA 9130401M01 gene |
chr9_-_66514567 | 0.12 |
ENSMUST00000056890.8
|
Fbxl22
|
F-box and leucine-rich repeat protein 22 |
chr10_+_39612934 | 0.11 |
ENSMUST00000019987.6
|
Traf3ip2
|
TRAF3 interacting protein 2 |
chr12_+_52699297 | 0.11 |
ENSMUST00000095737.3
|
Akap6
|
A kinase (PRKA) anchor protein 6 |
chrM_+_10167 | 0.11 |
ENSMUST00000082414.1
|
mt-Nd4
|
mitochondrially encoded NADH dehydrogenase 4 |
chr4_+_140701466 | 0.11 |
ENSMUST00000038893.5
ENSMUST00000138808.1 |
Rcc2
|
regulator of chromosome condensation 2 |
chr10_-_8886033 | 0.10 |
ENSMUST00000015449.5
|
Sash1
|
SAM and SH3 domain containing 1 |
chr15_-_9529868 | 0.10 |
ENSMUST00000003981.4
|
Il7r
|
interleukin 7 receptor |
chr17_-_36462329 | 0.09 |
ENSMUST00000169950.1
ENSMUST00000057502.7 |
H2-M10.4
|
histocompatibility 2, M region locus 10.4 |
chrM_+_7759 | 0.09 |
ENSMUST00000082407.1
ENSMUST00000082408.1 |
mt-Atp8
mt-Atp6
|
mitochondrially encoded ATP synthase 8 mitochondrially encoded ATP synthase 6 |
chr5_-_106926245 | 0.08 |
ENSMUST00000117588.1
|
Hfm1
|
HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) |
chr2_-_132247747 | 0.08 |
ENSMUST00000110163.1
ENSMUST00000180286.1 ENSMUST00000028816.2 |
Tmem230
|
transmembrane protein 230 |
chr4_-_129227883 | 0.08 |
ENSMUST00000106051.1
|
C77080
|
expressed sequence C77080 |
chr7_-_143460989 | 0.07 |
ENSMUST00000167912.1
ENSMUST00000037287.6 |
Cdkn1c
|
cyclin-dependent kinase inhibitor 1C (P57) |
chr16_-_45724600 | 0.07 |
ENSMUST00000096057.4
|
Tagln3
|
transgelin 3 |
chr9_-_120068263 | 0.07 |
ENSMUST00000064165.3
ENSMUST00000177637.1 |
Cx3cr1
|
chemokine (C-X3-C) receptor 1 |
chr7_+_6222278 | 0.06 |
ENSMUST00000072662.5
ENSMUST00000155314.1 |
Zscan5b
|
zinc finger and SCAN domain containing 5B |
chr6_+_72097561 | 0.06 |
ENSMUST00000069994.4
ENSMUST00000114112.1 |
St3gal5
|
ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
chr1_-_134955908 | 0.05 |
ENSMUST00000045665.6
ENSMUST00000086444.4 ENSMUST00000112163.1 |
Ppp1r12b
|
protein phosphatase 1, regulatory (inhibitor) subunit 12B |
chr12_+_109545390 | 0.02 |
ENSMUST00000146701.1
|
Meg3
|
maternally expressed 3 |
chr17_+_36837123 | 0.02 |
ENSMUST00000179968.1
ENSMUST00000130367.1 ENSMUST00000130801.1 ENSMUST00000144182.1 ENSMUST00000123715.1 ENSMUST00000053434.8 |
Trim26
|
tripartite motif-containing 26 |
chr11_+_116657106 | 0.02 |
ENSMUST00000116318.2
|
Gm11744
|
predicted gene 11744 |
chr8_+_14888022 | 0.02 |
ENSMUST00000123990.1
ENSMUST00000027554.7 |
Cln8
|
ceroid-lipofuscinosis, neuronal 8 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 0.5 | GO:1903919 | regulation of actin filament severing(GO:1903918) negative regulation of actin filament severing(GO:1903919) |
0.1 | 1.0 | GO:0061303 | cornea development in camera-type eye(GO:0061303) |
0.1 | 0.2 | GO:1901994 | negative regulation of meiotic cell cycle phase transition(GO:1901994) |
0.1 | 1.5 | GO:0001833 | inner cell mass cell proliferation(GO:0001833) |
0.1 | 0.3 | GO:0043366 | beta selection(GO:0043366) |
0.1 | 0.3 | GO:0051342 | regulation of cyclic-nucleotide phosphodiesterase activity(GO:0051342) |
0.1 | 0.2 | GO:0002439 | chronic inflammatory response to antigenic stimulus(GO:0002439) |
0.1 | 0.2 | GO:2000566 | antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway(GO:0002488) antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent(GO:0002489) positive regulation of CD8-positive, alpha-beta T cell proliferation(GO:2000566) |
0.0 | 0.2 | GO:0071799 | response to prostaglandin D(GO:0071798) cellular response to prostaglandin D stimulus(GO:0071799) |
0.0 | 0.3 | GO:0035469 | determination of pancreatic left/right asymmetry(GO:0035469) |
0.0 | 0.2 | GO:1901536 | regulation of DNA demethylation(GO:1901535) negative regulation of DNA demethylation(GO:1901536) |
0.0 | 0.2 | GO:0036151 | phosphatidylcholine acyl-chain remodeling(GO:0036151) |
0.0 | 0.1 | GO:1902498 | regulation of protein autoubiquitination(GO:1902498) |
0.0 | 0.4 | GO:0098789 | pre-mRNA cleavage required for polyadenylation(GO:0098789) |
0.0 | 0.3 | GO:0021796 | cerebral cortex regionalization(GO:0021796) |
0.0 | 0.2 | GO:0070100 | negative regulation of chemokine-mediated signaling pathway(GO:0070100) |
0.0 | 0.4 | GO:0071578 | zinc II ion transmembrane import(GO:0071578) |
0.0 | 0.2 | GO:0016198 | axon choice point recognition(GO:0016198) |
0.0 | 0.1 | GO:2000481 | positive regulation of ryanodine-sensitive calcium-release channel activity(GO:0060316) positive regulation of delayed rectifier potassium channel activity(GO:1902261) positive regulation of cAMP-dependent protein kinase activity(GO:2000481) |
0.0 | 0.1 | GO:0051987 | positive regulation of attachment of spindle microtubules to kinetochore(GO:0051987) |
0.0 | 0.4 | GO:0060707 | trophoblast giant cell differentiation(GO:0060707) |
0.0 | 0.2 | GO:0030388 | fructose 1,6-bisphosphate metabolic process(GO:0030388) |
0.0 | 0.1 | GO:0002282 | microglial cell activation involved in immune response(GO:0002282) |
0.0 | 0.3 | GO:0051044 | positive regulation of membrane protein ectodomain proteolysis(GO:0051044) |
0.0 | 0.1 | GO:0001915 | negative regulation of T cell mediated cytotoxicity(GO:0001915) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.1 | GO:0014701 | junctional sarcoplasmic reticulum membrane(GO:0014701) |
0.0 | 0.4 | GO:0031258 | lamellipodium membrane(GO:0031258) |
0.0 | 0.2 | GO:0033503 | HULC complex(GO:0033503) |
0.0 | 0.2 | GO:0001940 | male pronucleus(GO:0001940) |
0.0 | 0.2 | GO:0033588 | Elongator holoenzyme complex(GO:0033588) |
0.0 | 0.2 | GO:0042612 | MHC class I protein complex(GO:0042612) |
0.0 | 0.4 | GO:0005847 | mRNA cleavage and polyadenylation specificity factor complex(GO:0005847) |
0.0 | 0.2 | GO:0044232 | organelle membrane contact site(GO:0044232) |
0.0 | 1.7 | GO:0000792 | heterochromatin(GO:0000792) |
0.0 | 0.2 | GO:0008250 | oligosaccharyltransferase complex(GO:0008250) |
0.0 | 0.3 | GO:0042101 | T cell receptor complex(GO:0042101) |
0.0 | 0.2 | GO:0031527 | filopodium membrane(GO:0031527) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.5 | GO:0061629 | RNA polymerase II sequence-specific DNA binding transcription factor binding(GO:0061629) |
0.1 | 0.5 | GO:0005087 | Ran guanyl-nucleotide exchange factor activity(GO:0005087) |
0.1 | 0.2 | GO:0047192 | 1-alkylglycerophosphocholine O-acetyltransferase activity(GO:0047192) |
0.0 | 0.1 | GO:0061575 | cyclin-dependent protein serine/threonine kinase activator activity(GO:0061575) |
0.0 | 0.2 | GO:0016802 | adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802) |
0.0 | 0.2 | GO:0004332 | fructose-bisphosphate aldolase activity(GO:0004332) |
0.0 | 0.3 | GO:0019855 | calcium channel inhibitor activity(GO:0019855) |
0.0 | 0.2 | GO:0048495 | Roundabout binding(GO:0048495) |
0.0 | 0.2 | GO:0035727 | lysophosphatidic acid binding(GO:0035727) |
0.0 | 0.2 | GO:0030881 | beta-2-microglobulin binding(GO:0030881) |
0.0 | 0.2 | GO:0004955 | prostaglandin receptor activity(GO:0004955) |
0.0 | 0.1 | GO:0019960 | C-X3-C chemokine binding(GO:0019960) |
0.0 | 0.2 | GO:0050321 | tau-protein kinase activity(GO:0050321) |
0.0 | 0.4 | GO:0005385 | zinc ion transmembrane transporter activity(GO:0005385) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.2 | ST INTERFERON GAMMA PATHWAY | Interferon gamma pathway. |
0.0 | 1.5 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | REACTOME TRANSLOCATION OF ZAP 70 TO IMMUNOLOGICAL SYNAPSE | Genes involved in Translocation of ZAP-70 to Immunological synapse |
0.0 | 0.2 | REACTOME PROSTANOID LIGAND RECEPTORS | Genes involved in Prostanoid ligand receptors |
0.0 | 0.4 | REACTOME ZINC TRANSPORTERS | Genes involved in Zinc transporters |
0.0 | 0.1 | REACTOME TANDEM PORE DOMAIN POTASSIUM CHANNELS | Genes involved in Tandem pore domain potassium channels |