ISMARA results: Klf3

Project

GSE58827: Dynamics of the Mouse Liver

Navigation

Downloads

Results for Klf3

Z-value: 0.23

Motif logo

Transcription factors associated with Klf3

Gene Symbol	Gene ID	Gene Info
Klf3 Ensembl NCBI MGI UniProt	ENSMUSG00000029178.8	Kruppel-like factor 3 (basic)

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Klf3	mm10_v2_chr5_+_64803513_64803530	-0.03	8.5e-01	Click!

Activity profile of Klf3 motif

Sorted Z-values of Klf3 motif

Top targets:

Search:

Show entries

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chrX_-_102251852 Show fit	0.56	ENSMUST00000101336.3 ENSMUST00000136277.1	Cited1 Ensembl NCBI MGI UniProt Show fit	Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
chrX_-_102252154 Show fit	0.43	ENSMUST00000050551.3	Cited1 Ensembl NCBI MGI UniProt Show fit	Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
chr14_+_63046988 Show fit	0.28	ENSMUST00000067990.1 ENSMUST00000111203.1	Defb42 Ensembl NCBI MGI UniProt Show fit	defensin beta 42
chr10_-_12964252 Show fit	0.17	ENSMUST00000163425.1 ENSMUST00000042861.5	Stx11 Ensembl NCBI MGI UniProt Show fit	syntaxin 11
chr15_+_76457438 Show fit	0.17	ENSMUST00000043089.7	Scx Ensembl NCBI MGI UniProt Show fit	scleraxis
chr1_+_107511416 Show fit	0.17	ENSMUST00000009356.4	Serpinb2 Ensembl NCBI MGI UniProt Show fit	serine (or cysteine) peptidase inhibitor, clade B, member 2
chr1_+_107511489 Show fit	0.17	ENSMUST00000064916.2	Serpinb2 Ensembl NCBI MGI UniProt Show fit	serine (or cysteine) peptidase inhibitor, clade B, member 2
chrX_-_50942710 Show fit	0.15	ENSMUST00000060650.5	Frmd7 Ensembl NCBI MGI UniProt Show fit	FERM domain containing 7
chr7_-_103827922 Show fit	0.13	ENSMUST00000023934.6 ENSMUST00000153218.1	Hbb-bs Ensembl NCBI MGI UniProt Show fit	hemoglobin, beta adult s chain
chr15_-_102722120 Show fit	0.12	ENSMUST00000171838.1	Calcoco1 Ensembl NCBI MGI UniProt Show fit	calcium binding and coiled coil domain 1

Showing 1 to 10 of 38 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of Klf3

View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	1.0	GO:0071104	response to interleukin-9(GO:0071104) response to interleukin-11(GO:0071105)
0.0	0.2	GO:0035992	tendon cell differentiation(GO:0035990) tendon formation(GO:0035992)
0.0	0.2	GO:0043312	neutrophil degranulation(GO:0043312)
0.0	0.1	GO:1905000	regulation of membrane repolarization during atrial cardiac muscle cell action potential(GO:1905000)

Showing 1 to 4 of 4 entries

Gene overrepresentation in cellular component category:

Search:

Show entries

Total log-likelihood	Term	Description
0.1	GO:0031523	Myb complex(GO:0031523)
0.1	GO:0031838	haptoglobin-hemoglobin complex(GO:0031838)
0.0	GO:0033185	dolichol-phosphate-mannose synthase complex(GO:0033185)

Showing 1 to 3 of 3 entries

Gene overrepresentation in molecular function category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.0	GO:0050693	LBD domain binding(GO:0050693)
0.0	0.2	GO:0070016	armadillo repeat domain binding(GO:0070016)
0.0	0.1	GO:0031720	haptoglobin binding(GO:0031720) hemoglobin alpha binding(GO:0031721)
0.0	0.1	GO:0034988	Fc-gamma receptor I complex binding(GO:0034988)
0.0	0.0	GO:0004582	dolichyl-phosphate beta-D-mannosyltransferase activity(GO:0004582)

Showing 1 to 5 of 5 entries

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	REACTOME PROTEOLYTIC CLEAVAGE OF SNARE COMPLEX PROTEINS	Genes involved in Proteolytic cleavage of SNARE complex proteins

Showing 1 to 1 of 1 entries

Results for Klf3

Z-value: 0.23

Motif logo

Transcription factors associated with Klf3

Activity-expression correlation:

Activity profile of Klf3 motif

Sorted Z-values of Klf3 motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of Klf3

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: