GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Pou1f1 | mm10_v2_chr16_+_65520503_65520548 | -0.36 | 2.9e-02 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
7.3 | 242.0 | GO:0019373 | epoxygenase P450 pathway(GO:0019373) |
4.1 | 57.6 | GO:0052695 | cellular glucuronidation(GO:0052695) |
5.7 | 56.6 | GO:0071394 | cellular response to testosterone stimulus(GO:0071394) |
15.5 | 46.4 | GO:0018879 | biphenyl metabolic process(GO:0018879) |
3.3 | 45.9 | GO:0015747 | urate transport(GO:0015747) |
7.4 | 44.1 | GO:0008355 | olfactory learning(GO:0008355) |
1.8 | 42.6 | GO:0035634 | response to stilbenoid(GO:0035634) |
8.4 | 41.8 | GO:0001970 | positive regulation of activation of membrane attack complex(GO:0001970) |
13.6 | 40.8 | GO:0019626 | short-chain fatty acid catabolic process(GO:0019626) |
0.2 | 36.0 | GO:0007608 | sensory perception of smell(GO:0007608) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 262.2 | GO:0005783 | endoplasmic reticulum(GO:0005783) |
0.3 | 122.2 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
4.6 | 50.9 | GO:0005579 | membrane attack complex(GO:0005579) |
0.5 | 46.3 | GO:0005811 | lipid particle(GO:0005811) |
0.2 | 30.9 | GO:0031227 | intrinsic component of endoplasmic reticulum membrane(GO:0031227) |
0.1 | 28.5 | GO:0000139 | Golgi membrane(GO:0000139) |
0.8 | 27.2 | GO:0034364 | high-density lipoprotein particle(GO:0034364) |
0.4 | 26.3 | GO:0000800 | lateral element(GO:0000800) |
0.1 | 20.8 | GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane(GO:0031234) |
0.1 | 18.6 | GO:0005802 | trans-Golgi network(GO:0005802) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
6.0 | 227.8 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
4.3 | 107.8 | GO:0016712 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) |
16.2 | 97.4 | GO:0034875 | oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor(GO:0033695) caffeine oxidase activity(GO:0034875) |
24.5 | 73.4 | GO:0005186 | pheromone activity(GO:0005186) |
0.5 | 66.9 | GO:0052689 | carboxylic ester hydrolase activity(GO:0052689) |
15.9 | 63.4 | GO:0071614 | linoleic acid epoxygenase activity(GO:0071614) |
1.1 | 57.4 | GO:0004364 | glutathione transferase activity(GO:0004364) |
3.1 | 45.9 | GO:1901702 | urate transmembrane transporter activity(GO:0015143) salt transmembrane transporter activity(GO:1901702) |
10.3 | 30.9 | GO:0047006 | 17-alpha,20-alpha-dihydroxypregn-4-en-3-one dehydrogenase activity(GO:0047006) |
0.8 | 24.1 | GO:0008137 | NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 20.0 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.3 | 17.5 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
0.2 | 13.9 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.3 | 12.1 | SA PTEN PATHWAY | PTEN is a tumor suppressor that dephosphorylates the lipid messenger phosphatidylinositol triphosphate. |
0.4 | 10.0 | PID HIF1A PATHWAY | Hypoxic and oxygen homeostasis regulation of HIF-1-alpha |
0.1 | 9.7 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.2 | 8.6 | ST MYOCYTE AD PATHWAY | Myocyte Adrenergic Pathway is a specific case of the generalized Adrenergic Pathway. |
0.1 | 6.9 | PID P75 NTR PATHWAY | p75(NTR)-mediated signaling |
0.1 | 6.4 | ST T CELL SIGNAL TRANSDUCTION | T Cell Signal Transduction |
0.1 | 5.9 | SIG CD40PATHWAYMAP | Genes related to CD40 signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.6 | 85.9 | REACTOME COMPLEMENT CASCADE | Genes involved in Complement cascade |
0.3 | 68.5 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
1.0 | 41.1 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
1.1 | 23.8 | REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 7ALPHA HYDROXYCHOLESTEROL | Genes involved in Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol |
1.3 | 23.1 | REACTOME TRYPTOPHAN CATABOLISM | Genes involved in Tryptophan catabolism |
3.3 | 19.6 | REACTOME ETHANOL OXIDATION | Genes involved in Ethanol oxidation |
6.3 | 19.0 | REACTOME XENOBIOTICS | Genes involved in Xenobiotics |
1.2 | 15.4 | REACTOME GLUCURONIDATION | Genes involved in Glucuronidation |
0.7 | 14.7 | REACTOME AMINE DERIVED HORMONES | Genes involved in Amine-derived hormones |
0.4 | 14.7 | REACTOME METAL ION SLC TRANSPORTERS | Genes involved in Metal ion SLC transporters |