avrg: GSE58827: Dynamics of the Mouse Liver
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_+_75193783 Show fit | 1.48 |
ENSMUST00000102514.3
|
reticulon 4 receptor-like 1 |
|
chr14_+_17660956 Show fit | 1.44 |
ENSMUST00000022303.7
ENSMUST00000091471.4 |
thyroid hormone receptor beta |
|
chr11_-_119547744 Show fit | 1.36 |
ENSMUST00000026670.4
|
neuronal pentraxin 1 |
|
chr8_+_128359065 Show fit | 1.30 |
ENSMUST00000026917.8
|
neuropilin 1 |
|
chr6_-_84593810 Show fit | 1.24 |
ENSMUST00000077705.3
ENSMUST00000168003.2 |
cytochrome P450, family 26, subfamily b, polypeptide 1 |
|
chr1_+_187997821 Show fit | 1.05 |
ENSMUST00000027906.6
|
estrogen-related receptor gamma |
|
chr12_+_40446050 Show fit | 1.04 |
ENSMUST00000037488.6
|
dedicator of cytokinesis 4 |
|
chr12_+_78226627 Show fit | 1.00 |
ENSMUST00000110388.2
ENSMUST00000052472.4 |
gephyrin |
|
chr3_-_121263159 Show fit | 0.96 |
ENSMUST00000128909.1
|
transmembrane protein 56 |
|
chr3_+_57736056 Show fit | 0.95 |
ENSMUST00000041826.9
|
ring finger protein 13 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.5 | GO:0048681 | negative regulation of axon regeneration(GO:0048681) |
0.4 | 1.4 | GO:0007621 | negative regulation of female receptivity(GO:0007621) |
0.3 | 1.4 | GO:0060385 | axonogenesis involved in innervation(GO:0060385) |
0.4 | 1.3 | GO:0061552 | vestibulocochlear nerve structural organization(GO:0021649) cell migration involved in vasculogenesis(GO:0035441) neuropilin signaling pathway(GO:0038189) VEGF-activated neuropilin signaling pathway(GO:0038190) ganglion morphogenesis(GO:0061552) dorsal root ganglion morphogenesis(GO:1904835) |
0.4 | 1.2 | GO:1902809 | regulation of skeletal muscle fiber differentiation(GO:1902809) |
0.1 | 1.2 | GO:0051256 | mitotic spindle midzone assembly(GO:0051256) |
0.3 | 1.0 | GO:0007529 | establishment of synaptic specificity at neuromuscular junction(GO:0007529) |
0.3 | 1.0 | GO:1904694 | negative regulation of vascular smooth muscle contraction(GO:1904694) |
0.0 | 1.0 | GO:0006607 | NLS-bearing protein import into nucleus(GO:0006607) |
0.2 | 0.9 | GO:0090126 | protein complex assembly involved in synapse maturation(GO:0090126) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.9 | GO:0060077 | inhibitory synapse(GO:0060077) |
0.2 | 1.3 | GO:0097443 | sorting endosome(GO:0097443) |
0.0 | 1.2 | GO:0072686 | mitotic spindle(GO:0072686) |
0.0 | 1.1 | GO:0031902 | late endosome membrane(GO:0031902) |
0.0 | 1.1 | GO:0005643 | nuclear pore(GO:0005643) |
0.0 | 1.0 | GO:0032420 | stereocilium(GO:0032420) |
0.1 | 0.9 | GO:0034045 | pre-autophagosomal structure membrane(GO:0034045) |
0.1 | 0.9 | GO:0031462 | Cul2-RING ubiquitin ligase complex(GO:0031462) |
0.0 | 0.8 | GO:0000145 | exocyst(GO:0000145) |
0.0 | 0.8 | GO:0005902 | microvillus(GO:0005902) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.0 | GO:0030165 | PDZ domain binding(GO:0030165) |
0.0 | 1.6 | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity(GO:0008138) |
0.2 | 1.5 | GO:0035374 | chondroitin sulfate binding(GO:0035374) |
0.2 | 1.5 | GO:0070324 | thyroid hormone binding(GO:0070324) |
0.3 | 1.3 | GO:0038085 | vascular endothelial growth factor binding(GO:0038085) |
0.4 | 1.2 | GO:0008401 | retinoic acid 4-hydroxylase activity(GO:0008401) |
0.0 | 1.1 | GO:0003727 | single-stranded RNA binding(GO:0003727) |
0.3 | 1.0 | GO:0008940 | nitrate reductase activity(GO:0008940) |
0.0 | 1.0 | GO:0003708 | retinoic acid receptor activity(GO:0003708) |
0.0 | 1.0 | GO:0034185 | apolipoprotein binding(GO:0034185) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.7 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.0 | 1.5 | PID ECADHERIN STABILIZATION PATHWAY | Stabilization and expansion of the E-cadherin adherens junction |
0.0 | 1.4 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.1 | 1.3 | PID VEGF VEGFR PATHWAY | VEGF and VEGFR signaling network |
0.0 | 1.3 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.0 | 0.8 | PID LPA4 PATHWAY | LPA4-mediated signaling events |
0.0 | 0.8 | PID IL3 PATHWAY | IL3-mediated signaling events |
0.0 | 0.7 | PID RHOA PATHWAY | RhoA signaling pathway |
0.0 | 0.7 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
0.0 | 0.4 | PID PRL SIGNALING EVENTS PATHWAY | Signaling events mediated by PRL |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.5 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.0 | 1.8 | REACTOME TRANSCRIPTIONAL ACTIVITY OF SMAD2 SMAD3 SMAD4 HETEROTRIMER | Genes involved in Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer |
0.0 | 1.5 | REACTOME DAG AND IP3 SIGNALING | Genes involved in DAG and IP3 signaling |
0.1 | 1.3 | REACTOME VEGF LIGAND RECEPTOR INTERACTIONS | Genes involved in VEGF ligand-receptor interactions |
0.0 | 1.2 | REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE | Genes involved in Cytochrome P450 - arranged by substrate type |
0.0 | 1.1 | REACTOME METABOLISM OF VITAMINS AND COFACTORS | Genes involved in Metabolism of vitamins and cofactors |
0.0 | 1.1 | REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES | Genes involved in Antiviral mechanism by IFN-stimulated genes |
0.0 | 1.0 | REACTOME ZINC TRANSPORTERS | Genes involved in Zinc transporters |
0.1 | 0.8 | REACTOME IRAK1 RECRUITS IKK COMPLEX | Genes involved in IRAK1 recruits IKK complex |
0.0 | 0.8 | REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA | Genes involved in Circadian Repression of Expression by REV-ERBA |