avrg: GSE58827: Dynamics of the Mouse Liver
Name | miRBASE accession |
---|---|
mmu-miR-124-3p.1
|
MIMAT0000134 |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr10_+_84838143 Show fit | 7.89 |
ENSMUST00000095388.4
|
regulatory factor X, 4 (influences HLA class II expression) |
|
chr19_-_44407703 Show fit | 6.87 |
ENSMUST00000041331.2
|
stearoyl-Coenzyme A desaturase 1 |
|
chr1_+_166254095 Show fit | 6.86 |
ENSMUST00000111416.1
|
immunoglobulin-like domain containing receptor 2 |
|
chr4_-_105109829 Show fit | 6.67 |
ENSMUST00000030243.7
|
protein kinase, AMP-activated, alpha 2 catalytic subunit |
|
chr9_-_70141484 Show fit | 4.37 |
ENSMUST00000034749.8
|
family with sequence similarity 81, member A |
|
chr10_+_128933782 Show fit | 4.24 |
ENSMUST00000099112.2
|
integrin alpha 7 |
|
chr18_-_61536522 Show fit | 4.16 |
ENSMUST00000171629.1
|
Rho guanine nucleotide exchange factor (GEF) 37 |
|
chr8_+_76899772 Show fit | 4.16 |
ENSMUST00000109913.2
|
nuclear receptor subfamily 3, group C, member 2 |
|
chr8_+_85492568 Show fit | 4.15 |
ENSMUST00000034136.5
|
glutamic pyruvate transaminase (alanine aminotransferase) 2 |
|
chr7_+_51879041 Show fit | 4.01 |
ENSMUST00000107591.2
|
growth arrest specific 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 9.6 | GO:0055089 | fatty acid homeostasis(GO:0055089) |
1.7 | 8.5 | GO:0021914 | negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning(GO:0021914) |
0.0 | 8.4 | GO:0008360 | regulation of cell shape(GO:0008360) |
0.1 | 6.9 | GO:0048873 | homeostasis of number of cells within a tissue(GO:0048873) |
1.4 | 5.5 | GO:0048294 | negative regulation of isotype switching to IgE isotypes(GO:0048294) |
0.4 | 5.5 | GO:0030322 | stabilization of membrane potential(GO:0030322) |
0.3 | 4.8 | GO:0030497 | fatty acid elongation(GO:0030497) |
0.1 | 4.6 | GO:1902653 | cholesterol biosynthetic process(GO:0006695) secondary alcohol biosynthetic process(GO:1902653) |
0.9 | 4.4 | GO:0035166 | post-embryonic hemopoiesis(GO:0035166) |
1.4 | 4.2 | GO:0031959 | mineralocorticoid receptor signaling pathway(GO:0031959) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 17.2 | GO:0030176 | integral component of endoplasmic reticulum membrane(GO:0030176) |
0.0 | 11.9 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
0.3 | 9.2 | GO:0031588 | nucleotide-activated protein kinase complex(GO:0031588) |
0.0 | 5.8 | GO:0000151 | ubiquitin ligase complex(GO:0000151) |
0.1 | 5.1 | GO:0043034 | costamere(GO:0043034) |
0.0 | 4.3 | GO:0000790 | nuclear chromatin(GO:0000790) |
0.6 | 4.2 | GO:0005927 | muscle tendon junction(GO:0005927) |
0.9 | 3.8 | GO:0097447 | dendritic tree(GO:0097447) |
0.1 | 3.7 | GO:0046658 | anchored component of plasma membrane(GO:0046658) |
0.1 | 3.6 | GO:0005657 | replication fork(GO:0005657) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 9.2 | GO:0004679 | AMP-activated protein kinase activity(GO:0004679) |
0.1 | 8.3 | GO:0051117 | ATPase binding(GO:0051117) |
0.5 | 7.4 | GO:0022841 | potassium ion leak channel activity(GO:0022841) |
0.3 | 6.7 | GO:0042813 | Wnt-activated receptor activity(GO:0042813) |
0.1 | 6.0 | GO:0019888 | protein phosphatase regulator activity(GO:0019888) |
0.0 | 5.1 | GO:0000978 | RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978) |
0.4 | 4.6 | GO:0015924 | mannosyl-oligosaccharide mannosidase activity(GO:0015924) |
0.3 | 4.5 | GO:0001161 | intronic transcription regulatory region sequence-specific DNA binding(GO:0001161) |
0.1 | 4.4 | GO:0070566 | adenylyltransferase activity(GO:0070566) |
0.0 | 4.3 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.8 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.1 | 6.6 | PID FOXO PATHWAY | FoxO family signaling |
0.1 | 6.2 | PID LKB1 PATHWAY | LKB1 signaling events |
0.2 | 5.8 | PID INTEGRIN CS PATHWAY | Integrin family cell surface interactions |
0.1 | 5.8 | PID KIT PATHWAY | Signaling events mediated by Stem cell factor receptor (c-Kit) |
0.1 | 5.4 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.2 | 4.9 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.1 | 4.7 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.1 | 3.9 | PID S1P META PATHWAY | Sphingosine 1-phosphate (S1P) pathway |
0.1 | 3.7 | PID FOXM1 PATHWAY | FOXM1 transcription factor network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 15.1 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.6 | 9.2 | REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK | Genes involved in Regulation of Rheb GTPase activity by AMPK |
0.6 | 7.4 | REACTOME TANDEM PORE DOMAIN POTASSIUM CHANNELS | Genes involved in Tandem pore domain potassium channels |
0.1 | 7.1 | REACTOME TRIGLYCERIDE BIOSYNTHESIS | Genes involved in Triglyceride Biosynthesis |
0.3 | 5.6 | REACTOME ALPHA LINOLENIC ACID ALA METABOLISM | Genes involved in alpha-linolenic acid (ALA) metabolism |
0.1 | 5.4 | REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES | Genes involved in Antiviral mechanism by IFN-stimulated genes |
0.1 | 5.2 | REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS | Genes involved in Sphingolipid de novo biosynthesis |
0.1 | 4.8 | REACTOME METAL ION SLC TRANSPORTERS | Genes involved in Metal ion SLC transporters |
0.2 | 4.3 | REACTOME SIGNALING BY NODAL | Genes involved in Signaling by NODAL |
0.2 | 4.2 | REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION | Genes involved in Amino acid synthesis and interconversion (transamination) |