avrg: GSE58827: Dynamics of the Mouse Liver
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr8_+_68880491 Show fit | 3.44 |
ENSMUST00000015712.8
|
lipoprotein lipase |
|
chr5_-_134747241 Show fit | 3.28 |
ENSMUST00000015138.9
|
elastin |
|
chr15_+_11064764 Show fit | 3.04 |
ENSMUST00000061318.7
|
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12 |
|
chr7_-_134225088 Show fit | 2.80 |
ENSMUST00000067680.4
|
a disintegrin and metallopeptidase domain 12 (meltrin alpha) |
|
chr4_+_141010644 Show fit | 2.67 |
ENSMUST00000071977.8
|
microfibrillar-associated protein 2 |
|
chr2_+_163054682 Show fit | 2.58 |
ENSMUST00000018005.3
|
myeloblastosis oncogene-like 2 |
|
chr5_+_141241490 Show fit | 2.32 |
ENSMUST00000085774.4
|
sidekick homolog 1 (chicken) |
|
chr18_-_58209926 Show fit | 2.25 |
ENSMUST00000025497.6
|
fibrillin 2 |
|
chr6_-_92943485 Show fit | 2.22 |
ENSMUST00000113438.1
|
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9 |
|
chr1_-_45503282 Show fit | 2.07 |
ENSMUST00000086430.4
|
collagen, type V, alpha 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 5.5 | GO:0038063 | collagen-activated tyrosine kinase receptor signaling pathway(GO:0038063) |
0.8 | 4.2 | GO:0071694 | protein localization to extracellular region(GO:0071692) maintenance of protein location in extracellular region(GO:0071694) |
1.0 | 4.0 | GO:1903225 | negative regulation of endodermal cell differentiation(GO:1903225) |
0.0 | 4.0 | GO:0043149 | contractile actin filament bundle assembly(GO:0030038) stress fiber assembly(GO:0043149) |
0.7 | 3.4 | GO:0055096 | lipoprotein particle mediated signaling(GO:0055095) low-density lipoprotein particle mediated signaling(GO:0055096) |
0.1 | 3.3 | GO:0070208 | protein heterotrimerization(GO:0070208) |
0.5 | 3.2 | GO:0001957 | intramembranous ossification(GO:0001957) direct ossification(GO:0036072) |
0.8 | 3.0 | GO:1902202 | proteoglycan catabolic process(GO:0030167) regulation of hepatocyte growth factor receptor signaling pathway(GO:1902202) |
0.1 | 2.7 | GO:0030220 | platelet formation(GO:0030220) |
0.0 | 2.7 | GO:1990823 | response to leukemia inhibitory factor(GO:1990823) cellular response to leukemia inhibitory factor(GO:1990830) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.8 | GO:0005578 | proteinaceous extracellular matrix(GO:0005578) |
0.5 | 7.9 | GO:0001527 | microfibril(GO:0001527) fibril(GO:0043205) |
0.1 | 7.5 | GO:0005581 | collagen trimer(GO:0005581) |
1.2 | 7.1 | GO:0098645 | collagen type IV trimer(GO:0005587) network-forming collagen trimer(GO:0098642) collagen network(GO:0098645) basement membrane collagen trimer(GO:0098651) |
0.0 | 3.8 | GO:0005604 | basement membrane(GO:0005604) |
1.2 | 3.5 | GO:0005584 | collagen type I trimer(GO:0005584) |
0.2 | 3.4 | GO:0042627 | chylomicron(GO:0042627) |
0.8 | 3.3 | GO:0071953 | elastic fiber(GO:0071953) |
0.9 | 2.6 | GO:0005588 | collagen type V trimer(GO:0005588) |
0.5 | 2.6 | GO:0031523 | Myb complex(GO:0031523) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 14.7 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
0.1 | 14.2 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.5 | 7.0 | GO:0048407 | platelet-derived growth factor binding(GO:0048407) |
0.2 | 3.4 | GO:0004806 | triglyceride lipase activity(GO:0004806) |
0.3 | 3.1 | GO:0001135 | transcription factor activity, RNA polymerase II transcription factor recruiting(GO:0001135) |
0.5 | 2.7 | GO:0070051 | fibrinogen binding(GO:0070051) |
0.0 | 2.0 | GO:0070888 | E-box binding(GO:0070888) |
0.1 | 1.9 | GO:0004143 | diacylglycerol kinase activity(GO:0004143) |
0.2 | 1.7 | GO:0005005 | transmembrane-ephrin receptor activity(GO:0005005) |
0.3 | 1.6 | GO:0008273 | calcium, potassium:sodium antiporter activity(GO:0008273) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 17.8 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.3 | 16.3 | NABA COLLAGENS | Genes encoding collagen proteins |
0.1 | 9.9 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.0 | 3.8 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 2.9 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.1 | 2.8 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
0.0 | 2.7 | PID E2F PATHWAY | E2F transcription factor network |
0.0 | 2.2 | ST WNT BETA CATENIN PATHWAY | Wnt/beta-catenin Pathway |
0.1 | 2.0 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
0.1 | 1.9 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 15.7 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.2 | 4.5 | REACTOME CHYLOMICRON MEDIATED LIPID TRANSPORT | Genes involved in Chylomicron-mediated lipid transport |
0.1 | 2.6 | REACTOME G0 AND EARLY G1 | Genes involved in G0 and Early G1 |
0.1 | 2.3 | REACTOME SIGNALING BY BMP | Genes involved in Signaling by BMP |
0.1 | 2.3 | REACTOME SIGNALING BY FGFR1 FUSION MUTANTS | Genes involved in Signaling by FGFR1 fusion mutants |
0.0 | 2.2 | REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION | Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression |
0.0 | 1.9 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |
0.0 | 1.9 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |
0.1 | 1.8 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
0.1 | 1.6 | REACTOME GENERATION OF SECOND MESSENGER MOLECULES | Genes involved in Generation of second messenger molecules |