avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Ahr | mm10_v2_chr12_-_35534973_35535058 | -0.08 | 6.5e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.5 | 9.2 | GO:0042699 | follicle-stimulating hormone signaling pathway(GO:0042699) |
0.7 | 7.6 | GO:0045719 | negative regulation of glycogen biosynthetic process(GO:0045719) |
0.1 | 4.9 | GO:0006334 | nucleosome assembly(GO:0006334) |
0.1 | 3.9 | GO:0006284 | base-excision repair(GO:0006284) |
0.6 | 3.7 | GO:0019371 | cyclooxygenase pathway(GO:0019371) |
0.2 | 3.7 | GO:0010216 | maintenance of DNA methylation(GO:0010216) |
0.2 | 3.7 | GO:2000381 | negative regulation of mesoderm development(GO:2000381) |
0.0 | 3.4 | GO:0006352 | DNA-templated transcription, initiation(GO:0006352) |
0.6 | 3.2 | GO:0042908 | xenobiotic transport(GO:0042908) |
0.1 | 3.2 | GO:1901099 | negative regulation of signal transduction in absence of ligand(GO:1901099) negative regulation of extrinsic apoptotic signaling pathway in absence of ligand(GO:2001240) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 14.0 | GO:0005730 | nucleolus(GO:0005730) |
0.5 | 9.2 | GO:0031143 | pseudopodium(GO:0031143) |
0.0 | 6.5 | GO:0000775 | chromosome, centromeric region(GO:0000775) |
0.1 | 5.7 | GO:0005657 | replication fork(GO:0005657) |
0.1 | 5.4 | GO:0000786 | nucleosome(GO:0000786) |
0.0 | 5.4 | GO:0001650 | fibrillar center(GO:0001650) |
0.4 | 4.6 | GO:0001939 | female pronucleus(GO:0001939) |
0.0 | 3.7 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.1 | 2.9 | GO:0031430 | M band(GO:0031430) |
0.0 | 2.9 | GO:0000790 | nuclear chromatin(GO:0000790) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 15.0 | GO:0003723 | RNA binding(GO:0003723) |
3.1 | 9.2 | GO:0031896 | V2 vasopressin receptor binding(GO:0031896) |
0.1 | 8.5 | GO:0005158 | insulin receptor binding(GO:0005158) |
0.1 | 4.2 | GO:0070412 | R-SMAD binding(GO:0070412) |
0.5 | 3.5 | GO:0017050 | sphinganine kinase activity(GO:0008481) D-erythro-sphingosine kinase activity(GO:0017050) |
0.4 | 3.5 | GO:0051575 | 5'-deoxyribose-5-phosphate lyase activity(GO:0051575) |
0.7 | 3.4 | GO:0055056 | D-glucose transmembrane transporter activity(GO:0055056) |
0.1 | 3.4 | GO:0008143 | poly(A) binding(GO:0008143) |
0.0 | 3.3 | GO:0008237 | metallopeptidase activity(GO:0008237) |
0.5 | 3.1 | GO:0031493 | nucleosomal histone binding(GO:0031493) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 16.4 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.2 | 10.6 | PID IL8 CXCR1 PATHWAY | IL8- and CXCR1-mediated signaling events |
0.1 | 7.3 | PID IGF1 PATHWAY | IGF1 pathway |
0.1 | 5.7 | PID PLK1 PATHWAY | PLK1 signaling events |
0.0 | 4.0 | PID RHOA REG PATHWAY | Regulation of RhoA activity |
0.1 | 3.1 | PID S1P META PATHWAY | Sphingosine 1-phosphate (S1P) pathway |
0.1 | 2.9 | PID ATM PATHWAY | ATM pathway |
0.0 | 2.6 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.0 | 2.5 | PID HDAC CLASSII PATHWAY | Signaling events mediated by HDAC Class II |
0.1 | 2.3 | PID IL2 STAT5 PATHWAY | IL2 signaling events mediated by STAT5 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 10.1 | REACTOME ACTIVATED NOTCH1 TRANSMITS SIGNAL TO THE NUCLEUS | Genes involved in Activated NOTCH1 Transmits Signal to the Nucleus |
0.4 | 7.8 | REACTOME SIGNAL ATTENUATION | Genes involved in Signal attenuation |
0.1 | 5.8 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.1 | 5.5 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.1 | 5.0 | REACTOME DEPOSITION OF NEW CENPA CONTAINING NUCLEOSOMES AT THE CENTROMERE | Genes involved in Deposition of New CENPA-containing Nucleosomes at the Centromere |
0.5 | 4.2 | REACTOME APOBEC3G MEDIATED RESISTANCE TO HIV1 INFECTION | Genes involved in APOBEC3G mediated resistance to HIV-1 infection |
0.1 | 3.8 | REACTOME GLUCOSE TRANSPORT | Genes involved in Glucose transport |
0.0 | 3.7 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.1 | 3.5 | REACTOME RECYCLING PATHWAY OF L1 | Genes involved in Recycling pathway of L1 |
0.2 | 3.1 | REACTOME FACILITATIVE NA INDEPENDENT GLUCOSE TRANSPORTERS | Genes involved in Facilitative Na+-independent glucose transporters |