avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Aire | mm10_v2_chr10_-_78043580_78043611 | -0.04 | 8.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_+_39287074 Show fit | 2.57 |
ENSMUST00000003137.8
|
cytochrome P450, family 2, subfamily c, polypeptide 29 |
|
chr4_+_44943727 Show fit | 2.20 |
ENSMUST00000154177.1
|
predicted gene 12678 |
|
chr5_+_130369420 Show fit | 2.07 |
ENSMUST00000086029.3
|
calneuron 1 |
|
chr5_-_87091150 Show fit | 1.74 |
ENSMUST00000154455.1
|
UDP glucuronosyltransferase 2 family, polypeptide B36 |
|
chr12_+_84052114 Show fit | 1.53 |
ENSMUST00000120927.1
|
acyl-CoA thioesterase 3 |
|
chr1_+_88200601 Show fit | 1.46 |
ENSMUST00000049289.8
|
UDP glucuronosyltransferase 1 family, polypeptide A2 |
|
chr6_+_42245907 Show fit | 1.42 |
ENSMUST00000031897.5
|
glutathione S-transferase kappa 1 |
|
chr8_-_25038875 Show fit | 1.28 |
ENSMUST00000084031.4
|
HtrA serine peptidase 4 |
|
chr19_+_3323301 Show fit | 1.18 |
ENSMUST00000025835.4
|
carnitine palmitoyltransferase 1a, liver |
|
chr12_-_104865076 Show fit | 1.16 |
ENSMUST00000109937.1
ENSMUST00000109936.1 |
calmin |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.6 | GO:0019373 | epoxygenase P450 pathway(GO:0019373) |
0.0 | 1.9 | GO:1900047 | negative regulation of blood coagulation(GO:0030195) negative regulation of hemostasis(GO:1900047) |
0.0 | 1.6 | GO:2001238 | positive regulation of extrinsic apoptotic signaling pathway(GO:2001238) |
0.4 | 1.5 | GO:0032789 | saturated monocarboxylic acid metabolic process(GO:0032788) unsaturated monocarboxylic acid metabolic process(GO:0032789) |
0.1 | 1.5 | GO:0052697 | flavonoid glucuronidation(GO:0052696) xenobiotic glucuronidation(GO:0052697) |
0.1 | 1.5 | GO:0009437 | carnitine metabolic process(GO:0009437) |
0.0 | 1.4 | GO:0042773 | ATP synthesis coupled electron transport(GO:0042773) |
0.0 | 1.4 | GO:0006749 | glutathione metabolic process(GO:0006749) |
0.4 | 1.3 | GO:0042853 | glycine biosynthetic process, by transamination of glyoxylate(GO:0019265) L-alanine catabolic process(GO:0042853) |
0.3 | 1.3 | GO:0061625 | fructose catabolic process(GO:0006001) response to sucrose(GO:0009744) response to disaccharide(GO:0034285) fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate(GO:0061624) glycolytic process through fructose-1-phosphate(GO:0061625) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.4 | GO:0005777 | peroxisome(GO:0005777) microbody(GO:0042579) |
0.1 | 2.1 | GO:0032588 | trans-Golgi network membrane(GO:0032588) |
0.0 | 1.9 | GO:0072562 | blood microparticle(GO:0072562) |
0.0 | 1.2 | GO:0031307 | integral component of mitochondrial outer membrane(GO:0031307) |
0.0 | 1.0 | GO:0070469 | respiratory chain(GO:0070469) |
0.1 | 0.9 | GO:0036128 | CatSper complex(GO:0036128) |
0.0 | 0.9 | GO:0005751 | mitochondrial respiratory chain complex IV(GO:0005751) |
0.1 | 0.7 | GO:0016011 | dystroglycan complex(GO:0016011) |
0.0 | 0.6 | GO:0097225 | sperm midpiece(GO:0097225) |
0.0 | 0.5 | GO:0045275 | respiratory chain complex III(GO:0045275) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.2 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
0.4 | 2.6 | GO:0034875 | oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor(GO:0033695) caffeine oxidase activity(GO:0034875) |
0.1 | 1.5 | GO:0016290 | palmitoyl-CoA hydrolase activity(GO:0016290) |
0.1 | 1.4 | GO:0015035 | protein disulfide oxidoreductase activity(GO:0015035) |
0.4 | 1.3 | GO:0004454 | ketohexokinase activity(GO:0004454) |
0.2 | 1.3 | GO:0008453 | alanine-glyoxylate transaminase activity(GO:0008453) |
0.0 | 1.3 | GO:0005520 | insulin-like growth factor binding(GO:0005520) |
0.0 | 1.3 | GO:0005164 | tumor necrosis factor receptor binding(GO:0005164) |
0.2 | 1.2 | GO:0016416 | carnitine O-palmitoyltransferase activity(GO:0004095) O-palmitoyltransferase activity(GO:0016416) |
0.0 | 1.2 | GO:0016676 | cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.2 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.1 | 0.7 | ST PAC1 RECEPTOR PATHWAY | PAC1 Receptor Pathway |
0.0 | 0.7 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.0 | 0.6 | SA MMP CYTOKINE CONNECTION | Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix. |
0.0 | 0.4 | ST MYOCYTE AD PATHWAY | Myocyte Adrenergic Pathway is a specific case of the generalized Adrenergic Pathway. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.3 | REACTOME PYRIMIDINE CATABOLISM | Genes involved in Pyrimidine catabolism |
0.0 | 1.2 | REACTOME ACTIVATED AMPK STIMULATES FATTY ACID OXIDATION IN MUSCLE | Genes involved in Activated AMPK stimulates fatty-acid oxidation in muscle |
0.1 | 0.8 | REACTOME GAMMA CARBOXYLATION TRANSPORT AND AMINO TERMINAL CLEAVAGE OF PROTEINS | Genes involved in Gamma-carboxylation, transport, and amino-terminal cleavage of proteins |
0.1 | 0.7 | REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 24 HYDROXYCHOLESTEROL | Genes involved in Synthesis of bile acids and bile salts via 24-hydroxycholesterol |
0.0 | 0.7 | REACTOME INTRINSIC PATHWAY | Genes involved in Intrinsic Pathway |
0.0 | 0.5 | REACTOME BRANCHED CHAIN AMINO ACID CATABOLISM | Genes involved in Branched-chain amino acid catabolism |
0.0 | 0.4 | REACTOME PURINE CATABOLISM | Genes involved in Purine catabolism |
0.0 | 0.4 | REACTOME UNWINDING OF DNA | Genes involved in Unwinding of DNA |
0.1 | 0.3 | REACTOME DIGESTION OF DIETARY CARBOHYDRATE | Genes involved in Digestion of dietary carbohydrate |
0.0 | 0.3 | REACTOME MITOCHONDRIAL FATTY ACID BETA OXIDATION | Genes involved in Mitochondrial Fatty Acid Beta-Oxidation |