avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Ar | mm10_v2_chrX_+_98149666_98149721 | -0.40 | 1.5e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_-_28563362 Show fit | 13.99 |
ENSMUST00000028161.5
|
carboxyl ester lipase |
|
chr9_+_110419750 Show fit | 6.63 |
ENSMUST00000035061.6
|
neutrophilic granule protein |
|
chr10_+_75566257 Show fit | 6.61 |
ENSMUST00000129232.1
ENSMUST00000143792.1 |
gamma-glutamyltransferase 1 |
|
chr5_-_134915512 Show fit | 5.76 |
ENSMUST00000008987.4
|
claudin 13 |
|
chr8_-_107065632 Show fit | 4.99 |
ENSMUST00000034393.5
|
transmembrane emp24 protein transport domain containing 6 |
|
chr8_+_94179089 Show fit | 4.80 |
ENSMUST00000034215.6
|
metallothionein 1 |
|
chr6_-_116461024 Show fit | 4.16 |
ENSMUST00000164547.1
ENSMUST00000170186.1 |
arachidonate 5-lipoxygenase |
|
chr17_+_29114142 Show fit | 4.15 |
ENSMUST00000141797.1
ENSMUST00000132262.1 ENSMUST00000141239.1 ENSMUST00000138816.1 |
predicted gene 16194 |
|
chr14_+_51853699 Show fit | 4.00 |
ENSMUST00000169070.1
ENSMUST00000074477.6 |
eosinophil-associated, ribonuclease A family, member 6 |
|
chr4_-_137409777 Show fit | 3.69 |
ENSMUST00000024200.6
|
predicted gene 13011 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 14.0 | GO:0006707 | cholesterol catabolic process(GO:0006707) sterol catabolic process(GO:0016127) |
1.9 | 7.8 | GO:0002540 | leukotriene production involved in inflammatory response(GO:0002540) |
1.7 | 6.6 | GO:1901491 | negative regulation of lymphangiogenesis(GO:1901491) |
0.8 | 6.6 | GO:1901750 | leukotriene D4 metabolic process(GO:1901748) leukotriene D4 biosynthetic process(GO:1901750) |
0.2 | 6.2 | GO:0002026 | regulation of the force of heart contraction(GO:0002026) |
0.7 | 4.8 | GO:1990169 | detoxification of copper ion(GO:0010273) stress response to copper ion(GO:1990169) |
0.2 | 4.4 | GO:0038063 | collagen-activated tyrosine kinase receptor signaling pathway(GO:0038063) |
0.2 | 4.0 | GO:0030213 | hyaluronan biosynthetic process(GO:0030213) |
0.0 | 4.0 | GO:0002377 | immunoglobulin production(GO:0002377) |
0.4 | 3.6 | GO:0002432 | granuloma formation(GO:0002432) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 21.4 | GO:0005615 | extracellular space(GO:0005615) |
0.5 | 14.9 | GO:0042588 | zymogen granule(GO:0042588) |
0.5 | 8.1 | GO:0005641 | nuclear envelope lumen(GO:0005641) |
0.1 | 7.0 | GO:0016328 | lateral plasma membrane(GO:0016328) |
0.1 | 6.4 | GO:0031672 | A band(GO:0031672) |
0.0 | 5.4 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.0 | 5.0 | GO:0005789 | endoplasmic reticulum membrane(GO:0005789) |
0.3 | 3.6 | GO:0033093 | Weibel-Palade body(GO:0033093) |
0.3 | 3.4 | GO:0097197 | tetraspanin-enriched microdomain(GO:0097197) |
0.1 | 3.1 | GO:0000307 | cyclin-dependent protein kinase holoenzyme complex(GO:0000307) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
4.7 | 14.0 | GO:0004771 | sterol esterase activity(GO:0004771) retinyl-palmitate esterase activity(GO:0050253) |
2.6 | 7.8 | GO:0004051 | arachidonate 5-lipoxygenase activity(GO:0004051) |
0.9 | 6.9 | GO:0050649 | testosterone 6-beta-hydroxylase activity(GO:0050649) |
0.6 | 6.6 | GO:0036374 | glutathione hydrolase activity(GO:0036374) |
0.1 | 6.4 | GO:0004869 | cysteine-type endopeptidase inhibitor activity(GO:0004869) |
0.1 | 6.2 | GO:0003785 | actin monomer binding(GO:0003785) |
1.1 | 5.6 | GO:0055056 | D-glucose transmembrane transporter activity(GO:0055056) |
0.0 | 5.4 | GO:0002020 | protease binding(GO:0002020) |
0.0 | 4.9 | GO:0004519 | endonuclease activity(GO:0004519) |
0.1 | 4.7 | GO:0005507 | copper ion binding(GO:0005507) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.9 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 3.8 | PID IL2 STAT5 PATHWAY | IL2 signaling events mediated by STAT5 |
0.1 | 3.6 | PID IL4 2PATHWAY | IL4-mediated signaling events |
0.1 | 3.5 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.0 | 3.2 | PID CMYB PATHWAY | C-MYB transcription factor network |
0.2 | 3.1 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
0.0 | 2.1 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.1 | 1.9 | SA CASPASE CASCADE | Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade. |
0.1 | 1.9 | PID INSULIN GLUCOSE PATHWAY | Insulin-mediated glucose transport |
0.0 | 1.7 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 9.0 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.4 | 5.6 | REACTOME FACILITATIVE NA INDEPENDENT GLUCOSE TRANSPORTERS | Genes involved in Facilitative Na+-independent glucose transporters |
0.0 | 4.3 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.1 | 3.7 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.2 | 3.6 | REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS | Genes involved in Termination of O-glycan biosynthesis |
0.1 | 3.5 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |
0.1 | 3.1 | REACTOME G1 PHASE | Genes involved in G1 Phase |
0.0 | 2.8 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.1 | 2.7 | REACTOME SYNTHESIS SECRETION AND DEACYLATION OF GHRELIN | Genes involved in Synthesis, Secretion, and Deacylation of Ghrelin |
0.0 | 2.5 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |