avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Arnt | mm10_v2_chr3_+_95434386_95434428 | -0.62 | 6.3e-05 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr8_+_105269837 Show fit | 6.27 |
ENSMUST00000172525.1
ENSMUST00000174837.1 ENSMUST00000173859.1 |
heat shock transcription factor 4 |
|
chr8_+_105269788 Show fit | 6.07 |
ENSMUST00000036127.2
ENSMUST00000163734.2 |
heat shock transcription factor 4 |
|
chr17_+_36942910 Show fit | 5.55 |
ENSMUST00000040498.5
|
ring finger protein 39 |
|
chr14_+_69171576 Show fit | 5.18 |
ENSMUST00000062437.8
|
NK2 homeobox 6 |
|
chr1_-_121327672 Show fit | 4.64 |
ENSMUST00000159085.1
ENSMUST00000159125.1 ENSMUST00000161818.1 |
insulin induced gene 2 |
|
chr17_+_36943025 Show fit | 4.58 |
ENSMUST00000173072.1
|
ring finger protein 39 |
|
chr1_-_121327734 Show fit | 4.38 |
ENSMUST00000160968.1
ENSMUST00000162582.1 |
insulin induced gene 2 |
|
chr1_-_121328024 Show fit | 4.33 |
ENSMUST00000003818.7
|
insulin induced gene 2 |
|
chr1_-_121327776 Show fit | 4.05 |
ENSMUST00000160688.1
|
insulin induced gene 2 |
|
chr19_+_7056731 Show fit | 3.35 |
ENSMUST00000040261.5
|
MACRO domain containing 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.1 | 18.0 | GO:0060363 | cranial suture morphogenesis(GO:0060363) |
0.6 | 13.1 | GO:0033169 | histone H3-K9 demethylation(GO:0033169) |
1.7 | 5.2 | GO:0055014 | atrial cardiac muscle cell differentiation(GO:0055011) atrial cardiac muscle cell development(GO:0055014) |
0.1 | 4.8 | GO:0001702 | gastrulation with mouth forming second(GO:0001702) |
0.0 | 4.8 | GO:0008643 | carbohydrate transport(GO:0008643) |
0.1 | 4.5 | GO:0060351 | cartilage development involved in endochondral bone morphogenesis(GO:0060351) |
1.3 | 4.0 | GO:0042668 | auditory receptor cell fate determination(GO:0042668) |
0.2 | 3.7 | GO:0072189 | ureter development(GO:0072189) |
0.0 | 3.7 | GO:0000187 | activation of MAPK activity(GO:0000187) |
1.1 | 3.3 | GO:0043323 | positive regulation of natural killer cell degranulation(GO:0043323) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.2 | 17.4 | GO:0032937 | SREBP-SCAP-Insig complex(GO:0032937) |
0.0 | 11.7 | GO:0016607 | nuclear speck(GO:0016607) |
0.0 | 7.3 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
0.0 | 4.7 | GO:0000139 | Golgi membrane(GO:0000139) |
0.1 | 4.2 | GO:0005776 | autophagosome(GO:0005776) |
0.0 | 3.5 | GO:0030176 | integral component of endoplasmic reticulum membrane(GO:0030176) |
1.1 | 3.3 | GO:0032010 | phagolysosome(GO:0032010) |
0.1 | 3.0 | GO:0009295 | nucleoid(GO:0009295) mitochondrial nucleoid(GO:0042645) |
0.0 | 3.0 | GO:0005778 | peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903) |
0.0 | 2.4 | GO:0008076 | voltage-gated potassium channel complex(GO:0008076) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 16.1 | GO:0001227 | transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227) |
0.2 | 4.9 | GO:0005351 | sugar:proton symporter activity(GO:0005351) |
1.6 | 4.8 | GO:0003979 | UDP-glucose 6-dehydrogenase activity(GO:0003979) |
0.0 | 3.9 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
0.1 | 3.7 | GO:0030332 | cyclin binding(GO:0030332) |
0.3 | 3.2 | GO:0102337 | fatty acid elongase activity(GO:0009922) 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338) |
0.1 | 3.2 | GO:0019213 | deacetylase activity(GO:0019213) |
0.5 | 3.0 | GO:0016401 | palmitoyl-CoA oxidase activity(GO:0016401) |
0.5 | 2.7 | GO:0008269 | JAK pathway signal transduction adaptor activity(GO:0008269) |
0.0 | 2.7 | GO:0043130 | ubiquitin binding(GO:0043130) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.9 | PID LKB1 PATHWAY | LKB1 signaling events |
0.1 | 3.7 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.0 | 3.3 | PID IL2 1PATHWAY | IL2-mediated signaling events |
0.0 | 3.0 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.1 | 1.9 | PID HIF1A PATHWAY | Hypoxic and oxygen homeostasis regulation of HIF-1-alpha |
0.0 | 1.9 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
0.0 | 1.8 | PID RETINOIC ACID PATHWAY | Retinoic acid receptors-mediated signaling |
0.0 | 1.7 | PID VEGFR1 2 PATHWAY | Signaling events mediated by VEGFR1 and VEGFR2 |
0.1 | 1.6 | ST G ALPHA S PATHWAY | G alpha s Pathway |
0.0 | 1.5 | PID HIF2PATHWAY | HIF-2-alpha transcription factor network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 5.2 | REACTOME ALPHA LINOLENIC ACID ALA METABOLISM | Genes involved in alpha-linolenic acid (ALA) metabolism |
0.1 | 4.9 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.4 | 4.8 | REACTOME GLUCURONIDATION | Genes involved in Glucuronidation |
0.1 | 4.1 | REACTOME GLUCONEOGENESIS | Genes involved in Gluconeogenesis |
0.1 | 3.3 | REACTOME GROWTH HORMONE RECEPTOR SIGNALING | Genes involved in Growth hormone receptor signaling |
0.1 | 2.9 | REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA | Genes involved in Circadian Repression of Expression by REV-ERBA |
0.1 | 2.4 | REACTOME INSULIN RECEPTOR RECYCLING | Genes involved in Insulin receptor recycling |
0.1 | 2.3 | REACTOME IONOTROPIC ACTIVITY OF KAINATE RECEPTORS | Genes involved in Ionotropic activity of Kainate Receptors |
0.1 | 2.1 | REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS | Genes involved in Purine ribonucleoside monophosphate biosynthesis |
0.1 | 2.1 | REACTOME HS GAG BIOSYNTHESIS | Genes involved in HS-GAG biosynthesis |