avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Ascl2 | mm10_v2_chr7_-_142969238_142969264 | -0.41 | 1.2e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr10_-_128960965 Show fit | 3.51 |
ENSMUST00000026398.3
|
methyltransferase like 7B |
|
chr8_-_111691002 Show fit | 2.98 |
ENSMUST00000034435.5
|
chymotrypsinogen B1 |
|
chr4_-_137430517 Show fit | 2.90 |
ENSMUST00000102522.4
|
chymotrypsin-like elastase family, member 3B |
|
chr12_-_103457195 Show fit | 2.69 |
ENSMUST00000044687.6
|
interferon, alpha-inducible protein 27 like 2B |
|
chr10_+_127866457 Show fit | 2.38 |
ENSMUST00000092058.3
|
cDNA sequence BC089597 |
|
chr7_+_44207307 Show fit | 2.27 |
ENSMUST00000077354.4
|
kallikrein 1-related pepidase b4 |
|
chr4_-_141846359 Show fit | 2.13 |
ENSMUST00000037059.10
|
chymotrypsin C (caldecrin) |
|
chr4_-_141846277 Show fit | 2.08 |
ENSMUST00000105781.1
|
chymotrypsin C (caldecrin) |
|
chr7_+_44225430 Show fit | 2.06 |
ENSMUST00000075162.3
|
kallikrein 1 |
|
chr7_-_131322292 Show fit | 1.98 |
ENSMUST00000046611.7
|
CUB and zona pellucida-like domains 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 3.3 | GO:0046449 | creatinine metabolic process(GO:0046449) |
0.3 | 2.8 | GO:0051596 | methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727) |
0.2 | 2.8 | GO:0006707 | cholesterol catabolic process(GO:0006707) sterol catabolic process(GO:0016127) |
0.1 | 2.8 | GO:0043567 | regulation of insulin-like growth factor receptor signaling pathway(GO:0043567) |
0.1 | 2.4 | GO:0015813 | L-glutamate transport(GO:0015813) |
0.1 | 2.3 | GO:0043552 | positive regulation of phosphatidylinositol 3-kinase activity(GO:0043552) |
0.0 | 2.0 | GO:0048663 | neuron fate commitment(GO:0048663) |
0.5 | 1.9 | GO:0015744 | succinate transport(GO:0015744) |
0.1 | 1.8 | GO:0032897 | negative regulation of viral transcription(GO:0032897) |
0.0 | 1.8 | GO:0006730 | one-carbon metabolic process(GO:0006730) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.4 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
0.0 | 3.6 | GO:0005759 | mitochondrial matrix(GO:0005759) |
1.0 | 3.1 | GO:0070195 | growth hormone receptor complex(GO:0070195) |
0.0 | 3.1 | GO:0005758 | mitochondrial intermembrane space(GO:0005758) |
0.1 | 2.0 | GO:0042589 | zymogen granule membrane(GO:0042589) |
0.0 | 1.8 | GO:0005581 | collagen trimer(GO:0005581) |
0.0 | 1.6 | GO:0030672 | synaptic vesicle membrane(GO:0030672) exocytic vesicle membrane(GO:0099501) |
0.0 | 1.5 | GO:0000932 | cytoplasmic mRNA processing body(GO:0000932) |
0.1 | 1.2 | GO:0045252 | oxoglutarate dehydrogenase complex(GO:0045252) |
0.1 | 1.1 | GO:1990635 | proximal dendrite(GO:1990635) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 13.0 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.1 | 3.3 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
1.0 | 3.1 | GO:0004903 | growth hormone receptor activity(GO:0004903) |
0.3 | 2.8 | GO:0004416 | hydroxyacylglutathione hydrolase activity(GO:0004416) |
0.0 | 2.8 | GO:0008168 | methyltransferase activity(GO:0008168) |
0.3 | 2.7 | GO:0031995 | insulin-like growth factor II binding(GO:0031995) |
0.2 | 2.2 | GO:0005314 | high-affinity glutamate transmembrane transporter activity(GO:0005314) |
0.0 | 2.1 | GO:0001540 | beta-amyloid binding(GO:0001540) |
0.6 | 1.9 | GO:0017153 | sodium:dicarboxylate symporter activity(GO:0017153) |
0.1 | 1.9 | GO:0003854 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity(GO:0003854) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.7 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.0 | 3.5 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
0.2 | 2.9 | PID ERB GENOMIC PATHWAY | Validated nuclear estrogen receptor beta network |
0.0 | 2.9 | PID P73PATHWAY | p73 transcription factor network |
0.0 | 2.7 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.0 | 2.0 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
0.0 | 2.0 | PID FOXO PATHWAY | FoxO family signaling |
0.0 | 1.5 | PID A6B1 A6B4 INTEGRIN PATHWAY | a6b1 and a6b4 Integrin signaling |
0.0 | 1.5 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 1.5 | PID NOTCH PATHWAY | Notch signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.3 | REACTOME PROLACTIN RECEPTOR SIGNALING | Genes involved in Prolactin receptor signaling |
0.0 | 3.2 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.2 | 2.8 | REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 24 HYDROXYCHOLESTEROL | Genes involved in Synthesis of bile acids and bile salts via 24-hydroxycholesterol |
0.1 | 2.3 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
0.1 | 1.7 | REACTOME PURINE CATABOLISM | Genes involved in Purine catabolism |
0.0 | 1.7 | REACTOME TRANSPORT OF VITAMINS NUCLEOSIDES AND RELATED MOLECULES | Genes involved in Transport of vitamins, nucleosides, and related molecules |
0.1 | 1.5 | REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS | Genes involved in Bile salt and organic anion SLC transporters |
0.0 | 1.4 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.1 | 1.3 | REACTOME NFKB IS ACTIVATED AND SIGNALS SURVIVAL | Genes involved in NF-kB is activated and signals survival |
0.0 | 1.3 | REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE | Genes involved in Sema4D induced cell migration and growth-cone collapse |