avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Bsx | mm10_v2_chr9_+_40873981_40874127 | 0.23 | 1.8e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_-_119459266 Show fit | 3.74 |
ENSMUST00000033255.5
|
glycoprotein 2 (zymogen granule membrane) |
|
chr11_+_58640394 Show fit | 2.44 |
ENSMUST00000075084.4
|
tripartite motif-containing 58 |
|
chr5_-_137072254 Show fit | 2.17 |
ENSMUST00000077523.3
ENSMUST00000041388.4 |
serine (or cysteine) peptidase inhibitor, clade E, member 1 |
|
chr1_+_40439767 Show fit | 1.91 |
ENSMUST00000173514.1
|
interleukin 1 receptor-like 1 |
|
chr2_-_113829069 Show fit | 1.84 |
ENSMUST00000024005.7
|
secretogranin V |
|
chr3_-_116253467 Show fit | 1.47 |
ENSMUST00000090473.5
|
G-protein coupled receptor 88 |
|
chr17_-_47833169 Show fit | 1.08 |
ENSMUST00000131971.1
ENSMUST00000129360.1 ENSMUST00000113280.1 ENSMUST00000132125.1 |
MyoD family inhibitor |
|
chr2_-_32387760 Show fit | 1.06 |
ENSMUST00000050785.8
|
lipocalin 2 |
|
chr1_+_40439627 Show fit | 1.02 |
ENSMUST00000097772.3
|
interleukin 1 receptor-like 1 |
|
chr17_-_47833256 Show fit | 1.02 |
ENSMUST00000152455.1
ENSMUST00000035375.7 |
MyoD family inhibitor |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 3.7 | GO:0002386 | immune response in mucosal-associated lymphoid tissue(GO:0002386) |
0.3 | 2.9 | GO:0002826 | negative regulation of T-helper 1 type immune response(GO:0002826) |
0.7 | 2.2 | GO:2000097 | regulation of smooth muscle cell-matrix adhesion(GO:2000097) |
0.1 | 2.1 | GO:0060707 | trophoblast giant cell differentiation(GO:0060707) |
0.1 | 1.8 | GO:0016486 | peptide hormone processing(GO:0016486) |
0.4 | 1.5 | GO:0061743 | motor learning(GO:0061743) |
0.2 | 1.1 | GO:1901678 | iron coordination entity transport(GO:1901678) |
0.2 | 0.8 | GO:0002669 | positive regulation of T cell anergy(GO:0002669) positive regulation of lymphocyte anergy(GO:0002913) |
0.0 | 0.7 | GO:0051156 | glucose 6-phosphate metabolic process(GO:0051156) |
0.2 | 0.6 | GO:1903896 | positive regulation of IRE1-mediated unfolded protein response(GO:1903896) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.4 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.4 | 2.2 | GO:0042583 | chromaffin granule(GO:0042583) |
0.0 | 1.1 | GO:0005811 | lipid particle(GO:0005811) |
0.1 | 1.0 | GO:0005927 | muscle tendon junction(GO:0005927) |
0.1 | 0.9 | GO:0097197 | tetraspanin-enriched microdomain(GO:0097197) |
0.0 | 0.8 | GO:0000786 | nucleosome(GO:0000786) |
0.0 | 0.7 | GO:0043034 | costamere(GO:0043034) |
0.1 | 0.6 | GO:0072687 | meiotic spindle(GO:0072687) |
0.0 | 0.5 | GO:0097038 | perinuclear endoplasmic reticulum(GO:0097038) |
0.1 | 0.4 | GO:0030015 | CCR4-NOT core complex(GO:0030015) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.7 | GO:0003823 | antigen binding(GO:0003823) |
0.0 | 3.2 | GO:0002020 | protease binding(GO:0002020) |
1.0 | 2.9 | GO:0002113 | interleukin-33 binding(GO:0002113) |
0.0 | 1.6 | GO:0051082 | unfolded protein binding(GO:0051082) |
0.1 | 1.0 | GO:0017166 | vinculin binding(GO:0017166) |
0.0 | 0.9 | GO:0070330 | aromatase activity(GO:0070330) |
0.0 | 0.8 | GO:0031492 | nucleosomal DNA binding(GO:0031492) |
0.0 | 0.8 | GO:0001784 | phosphotyrosine binding(GO:0001784) |
0.2 | 0.7 | GO:0050309 | glucose-6-phosphatase activity(GO:0004346) sugar-terminal-phosphatase activity(GO:0050309) |
0.1 | 0.6 | GO:0050786 | RAGE receptor binding(GO:0050786) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.2 | PID HIF2PATHWAY | HIF-2-alpha transcription factor network |
0.0 | 0.8 | PID CD40 PATHWAY | CD40/CD40L signaling |
0.0 | 0.6 | NABA COLLAGENS | Genes encoding collagen proteins |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.2 | REACTOME SMAD2 SMAD3 SMAD4 HETEROTRIMER REGULATES TRANSCRIPTION | Genes involved in SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription |
0.0 | 1.0 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.0 | 0.8 | REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS | Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers |
0.0 | 0.8 | REACTOME RNA POL I PROMOTER OPENING | Genes involved in RNA Polymerase I Promoter Opening |
0.0 | 0.7 | REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS | Genes involved in Termination of O-glycan biosynthesis |
0.0 | 0.7 | REACTOME GLUCOSE TRANSPORT | Genes involved in Glucose transport |
0.0 | 0.6 | REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION | Genes involved in Apoptosis induced DNA fragmentation |
0.0 | 0.4 | REACTOME DEADENYLATION OF MRNA | Genes involved in Deadenylation of mRNA |