avrg: GSE58827: Dynamics of the Mouse Liver
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_-_53480178 Show fit | 3.98 |
ENSMUST00000104955.2
|
sosondowah ankyrin repeat domain family member A |
|
chr12_+_109452833 Show fit | 3.94 |
ENSMUST00000056110.8
|
delta-like 1 homolog (Drosophila) |
|
chr11_-_102088471 Show fit | 3.39 |
ENSMUST00000017458.4
|
membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) |
|
chr9_-_42124276 Show fit | 2.67 |
ENSMUST00000060989.8
|
sortilin-related receptor, LDLR class A repeats-containing |
|
chrX_+_136270253 Show fit | 2.66 |
ENSMUST00000178632.1
ENSMUST00000053540.4 |
nerve growth factor receptor (TNFRSF16) associated protein 1 |
|
chr12_+_102129019 Show fit | 2.59 |
ENSMUST00000079020.4
|
solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 |
|
chr4_+_49059256 Show fit | 2.53 |
ENSMUST00000076670.2
|
RIKEN cDNA E130309F12 gene |
|
chr2_-_32083783 Show fit | 2.52 |
ENSMUST00000056406.6
|
family with sequence similarity 78, member A |
|
chr12_+_24831583 Show fit | 2.47 |
ENSMUST00000110942.3
ENSMUST00000078902.6 |
membrane bound O-acyltransferase domain containing 2 |
|
chr2_-_168767029 Show fit | 2.30 |
ENSMUST00000075044.3
|
sal-like 4 (Drosophila) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.0 | GO:0045780 | positive regulation of bone resorption(GO:0045780) positive regulation of bone remodeling(GO:0046852) |
0.2 | 2.9 | GO:0035970 | peptidyl-threonine dephosphorylation(GO:0035970) |
0.7 | 2.7 | GO:2001137 | positive regulation of ER to Golgi vesicle-mediated transport(GO:1902953) positive regulation of endocytic recycling(GO:2001137) |
0.1 | 2.5 | GO:0051984 | positive regulation of chromosome segregation(GO:0051984) |
0.1 | 2.3 | GO:0001833 | inner cell mass cell proliferation(GO:0001833) |
0.1 | 2.2 | GO:0097186 | amelogenesis(GO:0097186) |
0.3 | 2.1 | GO:0010694 | positive regulation of alkaline phosphatase activity(GO:0010694) |
0.0 | 2.1 | GO:0007257 | activation of JUN kinase activity(GO:0007257) |
0.2 | 2.0 | GO:0010587 | miRNA catabolic process(GO:0010587) |
0.1 | 2.0 | GO:0032967 | positive regulation of collagen metabolic process(GO:0010714) positive regulation of collagen biosynthetic process(GO:0032967) positive regulation of multicellular organismal metabolic process(GO:0044253) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.3 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.0 | 3.1 | GO:0031594 | neuromuscular junction(GO:0031594) |
0.1 | 2.9 | GO:0032590 | dendrite membrane(GO:0032590) |
0.0 | 2.7 | GO:0014704 | intercalated disc(GO:0014704) |
0.2 | 2.6 | GO:0005641 | nuclear envelope lumen(GO:0005641) |
0.1 | 2.3 | GO:0000788 | nuclear nucleosome(GO:0000788) |
0.7 | 2.1 | GO:0034666 | integrin alpha2-beta1 complex(GO:0034666) |
0.0 | 2.0 | GO:0005581 | collagen trimer(GO:0005581) |
0.0 | 1.9 | GO:0010494 | cytoplasmic stress granule(GO:0010494) |
0.2 | 1.7 | GO:0070578 | RISC-loading complex(GO:0070578) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.0 | GO:0016279 | lysine N-methyltransferase activity(GO:0016278) protein-lysine N-methyltransferase activity(GO:0016279) |
0.2 | 3.6 | GO:0035198 | miRNA binding(GO:0035198) |
0.0 | 3.5 | GO:0030165 | PDZ domain binding(GO:0030165) |
0.0 | 3.2 | GO:0004722 | protein serine/threonine phosphatase activity(GO:0004722) |
0.0 | 2.7 | GO:0030507 | spectrin binding(GO:0030507) |
0.4 | 2.6 | GO:0008273 | calcium, potassium:sodium antiporter activity(GO:0008273) |
0.4 | 2.5 | GO:0047184 | 1-acylglycerophosphocholine O-acyltransferase activity(GO:0047184) |
0.1 | 2.4 | GO:0042813 | Wnt-activated receptor activity(GO:0042813) |
0.2 | 2.2 | GO:0030306 | ADP-ribosylation factor binding(GO:0030306) |
0.4 | 2.1 | GO:0098639 | collagen binding involved in cell-matrix adhesion(GO:0098639) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.6 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 3.5 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.1 | 3.2 | PID SYNDECAN 2 PATHWAY | Syndecan-2-mediated signaling events |
0.1 | 2.4 | PID LPA4 PATHWAY | LPA4-mediated signaling events |
0.0 | 2.4 | PID ECADHERIN NASCENT AJ PATHWAY | E-cadherin signaling in the nascent adherens junction |
0.0 | 2.0 | ST WNT BETA CATENIN PATHWAY | Wnt/beta-catenin Pathway |
0.0 | 1.7 | PID ATR PATHWAY | ATR signaling pathway |
0.0 | 1.7 | PID P75 NTR PATHWAY | p75(NTR)-mediated signaling |
0.0 | 1.7 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
0.1 | 1.4 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.3 | REACTOME O LINKED GLYCOSYLATION OF MUCINS | Genes involved in O-linked glycosylation of mucins |
0.1 | 3.4 | REACTOME ACTIVATED NOTCH1 TRANSMITS SIGNAL TO THE NUCLEUS | Genes involved in Activated NOTCH1 Transmits Signal to the Nucleus |
0.1 | 2.5 | REACTOME ACYL CHAIN REMODELLING OF PC | Genes involved in Acyl chain remodelling of PC |
0.2 | 2.4 | REACTOME CDC6 ASSOCIATION WITH THE ORC ORIGIN COMPLEX | Genes involved in CDC6 association with the ORC:origin complex |
0.1 | 2.4 | REACTOME CGMP EFFECTS | Genes involved in cGMP effects |
0.0 | 2.2 | REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES | Genes involved in Loss of Nlp from mitotic centrosomes |
0.1 | 2.1 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |
0.1 | 2.1 | REACTOME GENERATION OF SECOND MESSENGER MOLECULES | Genes involved in Generation of second messenger molecules |
0.1 | 1.9 | REACTOME PKA MEDIATED PHOSPHORYLATION OF CREB | Genes involved in PKA-mediated phosphorylation of CREB |
0.0 | 1.7 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |