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avrg: GSE58827: Dynamics of the Mouse Liver

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Results for CCAGCAU

Z-value: 0.16

Motif logo

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miRNA associated with seed CCAGCAU

NamemiRBASE accession
mmu-miR-338-3p
MIMAT0000582

Activity profile of CCAGCAU motif

Sorted Z-values of CCAGCAU motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr13_+_89540636 0.15 ENSMUST00000022108.7
Hapln1
hyaluronan and proteoglycan link protein 1
chr8_+_76899772 0.13 ENSMUST00000109913.2
Nr3c2
nuclear receptor subfamily 3, group C, member 2
chr8_-_41133697 0.12 ENSMUST00000155055.1
ENSMUST00000059115.6
ENSMUST00000145860.1
Mtus1
mitochondrial tumor suppressor 1
chr18_-_16809233 0.11 ENSMUST00000025166.7
Cdh2
cadherin 2
chr10_+_53337686 0.11 ENSMUST00000046221.6
ENSMUST00000163319.1
Pln
phospholamban
chr7_-_119895697 0.11 ENSMUST00000059851.6
Dcun1d3
DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
chr2_-_52676571 0.10 ENSMUST00000178799.1
Cacnb4
calcium channel, voltage-dependent, beta 4 subunit
chr4_+_97777606 0.10 ENSMUST00000075448.6
ENSMUST00000092532.6
Nfia
nuclear factor I/A
chr6_-_134792596 0.09 ENSMUST00000100857.3
Dusp16
dual specificity phosphatase 16
chr3_-_89387132 0.09 ENSMUST00000107433.1
Zbtb7b
zinc finger and BTB domain containing 7B
chr9_-_120023558 0.08 ENSMUST00000111635.2
Xirp1
xin actin-binding repeat containing 1
chr4_-_140665891 0.08 ENSMUST00000069623.5
Arhgef10l
Rho guanine nucleotide exchange factor (GEF) 10-like
chr19_-_37330613 0.08 ENSMUST00000131070.1
Ide
insulin degrading enzyme
chr11_-_20112876 0.08 ENSMUST00000000137.7
Actr2
ARP2 actin-related protein 2
chr7_-_90457167 0.06 ENSMUST00000032844.5
Tmem126a
transmembrane protein 126A
chr17_+_8165501 0.06 ENSMUST00000097419.3
ENSMUST00000024636.8
Fgfr1op
Fgfr1 oncogene partner
chr19_-_58860975 0.06 ENSMUST00000066285.4
Hspa12a
heat shock protein 12A
chr10_+_18407658 0.06 ENSMUST00000037341.7
Nhsl1
NHS-like 1
chr11_+_5520652 0.05 ENSMUST00000063084.9
Xbp1
X-box binding protein 1
chr11_-_96075655 0.05 ENSMUST00000090541.5
Atp5g1
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)
chr7_-_133123312 0.05 ENSMUST00000171022.1
ENSMUST00000163601.1
ENSMUST00000165534.1
ENSMUST00000033269.8
ENSMUST00000124096.1
Ctbp2
Fgfr2
C-terminal binding protein 2
fibroblast growth factor receptor 2
chr8_-_89044162 0.05 ENSMUST00000034090.6
Sall1
sal-like 1 (Drosophila)
chr6_+_72414301 0.05 ENSMUST00000065906.7
Ggcx
gamma-glutamyl carboxylase
chr3_+_41555723 0.05 ENSMUST00000026865.8
Phf17
PHD finger protein 17
chr11_+_72607221 0.05 ENSMUST00000021148.6
ENSMUST00000138247.1
Ube2g1
ubiquitin-conjugating enzyme E2G 1
chr19_-_47464406 0.05 ENSMUST00000111800.2
ENSMUST00000081619.2
Sh3pxd2a
SH3 and PX domains 2A
chr16_+_35022394 0.05 ENSMUST00000061156.8
Ptplb
protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b
chr6_+_8948608 0.05 ENSMUST00000160300.1
Nxph1
neurexophilin 1
chr11_-_96824008 0.05 ENSMUST00000142065.1
ENSMUST00000167110.1
ENSMUST00000169828.1
ENSMUST00000126949.1
Nfe2l1
nuclear factor, erythroid derived 2,-like 1
chr19_-_34747289 0.05 ENSMUST00000009522.3
Slc16a12
solute carrier family 16 (monocarboxylic acid transporters), member 12
chr10_-_31609184 0.05 ENSMUST00000081989.6
Rnf217
ring finger protein 217
chr4_-_151861762 0.05 ENSMUST00000097774.2
Camta1
calmodulin binding transcription activator 1
chr2_-_52424826 0.04 ENSMUST00000036541.7
Arl5a
ADP-ribosylation factor-like 5A
chr15_+_34082664 0.04 ENSMUST00000022865.9
Mtdh
metadherin
chr7_-_144939823 0.04 ENSMUST00000093962.4
Ccnd1
cyclin D1
chr12_-_56535047 0.04 ENSMUST00000178477.2
Nkx2-1
NK2 homeobox 1
chr18_+_32163073 0.04 ENSMUST00000096575.3
Map3k2
mitogen-activated protein kinase kinase kinase 2
chr16_-_10993100 0.04 ENSMUST00000023143.7
Litaf
LPS-induced TN factor
chr1_+_177444653 0.04 ENSMUST00000094276.3
Zbtb18
zinc finger and BTB domain containing 18
chr6_-_113195380 0.04 ENSMUST00000162280.1
Lhfpl4
lipoma HMGIC fusion partner-like protein 4
chr4_-_149099802 0.04 ENSMUST00000103217.4
Pex14
peroxisomal biogenesis factor 14
chr18_+_11052487 0.04 ENSMUST00000047762.7
Gata6
GATA binding protein 6
chr1_+_120602405 0.04 ENSMUST00000079721.7
En1
engrailed 1
chr3_-_116007399 0.04 ENSMUST00000067485.3
Slc30a7
solute carrier family 30 (zinc transporter), member 7
chrX_-_141725181 0.03 ENSMUST00000067841.7
Irs4
insulin receptor substrate 4
chr5_-_30960236 0.03 ENSMUST00000088063.2
Preb
prolactin regulatory element binding
chr3_+_103279293 0.03 ENSMUST00000029444.6
ENSMUST00000106860.1
Trim33
tripartite motif-containing 33
chr4_-_56990332 0.03 ENSMUST00000053681.5
Frrs1l
ferric-chelate reductase 1 like
chr15_+_4375462 0.03 ENSMUST00000061925.4
Plcxd3
phosphatidylinositol-specific phospholipase C, X domain containing 3
chr17_+_30005029 0.03 ENSMUST00000057897.7
Zfand3
zinc finger, AN1-type domain 3
chr7_-_99858872 0.03 ENSMUST00000036274.6
Spcs2
signal peptidase complex subunit 2 homolog (S. cerevisiae)
chr9_+_32116040 0.03 ENSMUST00000174641.1
Arhgap32
Rho GTPase activating protein 32
chr2_-_160367057 0.03 ENSMUST00000099126.3
Mafb
v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
chrX_-_109013389 0.03 ENSMUST00000033597.8
Hmgn5
high-mobility group nucleosome binding domain 5
chr17_-_70990751 0.03 ENSMUST00000038446.8
Myl12b
myosin, light chain 12B, regulatory
chr4_-_82859571 0.03 ENSMUST00000156055.1
ENSMUST00000030110.8
Zdhhc21
zinc finger, DHHC domain containing 21
chr10_+_127739516 0.03 ENSMUST00000054287.7
Zbtb39
zinc finger and BTB domain containing 39
chr2_+_59612034 0.03 ENSMUST00000112568.1
ENSMUST00000037526.4
Tanc1
tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
chr7_+_134670667 0.03 ENSMUST00000084488.4
Dock1
dedicator of cytokinesis 1
chr2_-_35200923 0.02 ENSMUST00000028238.8
ENSMUST00000113025.1
Rab14
RAB14, member RAS oncogene family
chr14_-_78536762 0.02 ENSMUST00000123853.1
Akap11
A kinase (PRKA) anchor protein 11
chr6_+_66896397 0.02 ENSMUST00000043148.6
ENSMUST00000114228.1
ENSMUST00000114227.1
ENSMUST00000114226.1
ENSMUST00000114225.1
ENSMUST00000114224.1
Gng12
guanine nucleotide binding protein (G protein), gamma 12
chr4_-_133633419 0.02 ENSMUST00000084238.4
Zdhhc18
zinc finger, DHHC domain containing 18
chr2_-_162661075 0.02 ENSMUST00000109442.1
ENSMUST00000109445.2
ENSMUST00000109443.1
ENSMUST00000109441.1
Ptprt
protein tyrosine phosphatase, receptor type, T
chr5_+_65537209 0.02 ENSMUST00000142407.1
Ube2k
ubiquitin-conjugating enzyme E2K
chr16_-_67620880 0.02 ENSMUST00000114292.1
ENSMUST00000120898.1
Cadm2
cell adhesion molecule 2
chr5_+_118169712 0.02 ENSMUST00000054836.6
Hrk
harakiri, BCL2 interacting protein (contains only BH3 domain)
chr14_+_45351473 0.02 ENSMUST00000111835.2
Styx
serine/threonine/tyrosine interaction protein
chr7_+_122067164 0.02 ENSMUST00000033158.4
Ubfd1
ubiquitin family domain containing 1
chr19_-_43388292 0.02 ENSMUST00000099428.3
Hpse2
heparanase 2
chr10_+_57486354 0.01 ENSMUST00000079833.4
Hsf2
heat shock factor 2
chr3_+_89773562 0.01 ENSMUST00000038356.8
Ube2q1
ubiquitin-conjugating enzyme E2Q (putative) 1
chr13_-_105054895 0.01 ENSMUST00000063551.5
Rgs7bp
regulator of G-protein signalling 7 binding protein
chr8_-_115707778 0.01 ENSMUST00000109104.1
Maf
avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
chr16_+_4726357 0.01 ENSMUST00000154117.1
ENSMUST00000004172.8
Hmox2
heme oxygenase (decycling) 2
chr3_-_158562199 0.01 ENSMUST00000106044.1
Lrrc7
leucine rich repeat containing 7
chr3_+_152395991 0.01 ENSMUST00000106100.2
Zzz3
zinc finger, ZZ domain containing 3
chrX_-_72918411 0.01 ENSMUST00000114551.3
Cetn2
centrin 2
chr2_+_151542483 0.01 ENSMUST00000044011.5
Fkbp1a
FK506 binding protein 1a
chr18_-_23041641 0.01 ENSMUST00000097651.3
Nol4
nucleolar protein 4
chr10_-_112928974 0.01 ENSMUST00000099276.2
Atxn7l3b
ataxin 7-like 3B
chr5_-_121009510 0.00 ENSMUST00000079204.5
Rph3a
rabphilin 3A
chr7_+_19094594 0.00 ENSMUST00000049454.5
Six5
sine oculis-related homeobox 5
chr2_+_30061754 0.00 ENSMUST00000149578.1
ENSMUST00000102866.3
Set
SET nuclear oncogene
chr2_+_156196642 0.00 ENSMUST00000037401.8
Phf20
PHD finger protein 20
chr6_-_51469869 0.00 ENSMUST00000114459.1
ENSMUST00000069949.6
Hnrnpa2b1
heterogeneous nuclear ribonucleoprotein A2/B1
chr12_+_111166349 0.00 ENSMUST00000117269.1
Traf3
TNF receptor-associated factor 3
chr16_+_17797282 0.00 ENSMUST00000012161.3
Scarf2
scavenger receptor class F, member 2
chr12_-_101819048 0.00 ENSMUST00000021603.8
Fbln5
fibulin 5
chr13_+_34162953 0.00 ENSMUST00000124996.1
ENSMUST00000147632.1
Psmg4
proteasome (prosome, macropain) assembly chaperone 4
chr2_-_33468493 0.00 ENSMUST00000113156.1
ENSMUST00000028125.5
ENSMUST00000126442.1
Zbtb43
zinc finger and BTB domain containing 43

Network of associatons between targets according to the STRING database.

First level regulatory network of CCAGCAU

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0031959 mineralocorticoid receptor signaling pathway(GO:0031959)
0.0 0.1 GO:0016344 meiotic chromosome movement towards spindle pole(GO:0016344)
0.0 0.1 GO:0043376 regulation of CD8-positive, alpha-beta T cell differentiation(GO:0043376)
0.0 0.1 GO:1902897 regulation of postsynaptic density protein 95 clustering(GO:1902897)
0.0 0.1 GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) cellular response to fructose stimulus(GO:0071332)
0.0 0.1 GO:0035602 fibroblast growth factor receptor signaling pathway involved in negative regulation of apoptotic process in bone marrow(GO:0035602) fibroblast growth factor receptor signaling pathway involved in hemopoiesis(GO:0035603) fibroblast growth factor receptor signaling pathway involved in positive regulation of cell proliferation in bone marrow(GO:0035604) coronal suture morphogenesis(GO:0060365)
0.0 0.1 GO:0018214 peptidyl-glutamic acid carboxylation(GO:0017187) protein carboxylation(GO:0018214)
0.0 0.0 GO:0015881 creatine transport(GO:0015881)
0.0 0.0 GO:0021759 globus pallidus development(GO:0021759)
0.0 0.0 GO:0016561 protein import into peroxisome matrix, translocation(GO:0016561)
0.0 0.0 GO:0007493 endodermal cell fate determination(GO:0007493)
0.0 0.1 GO:2000384 regulation of ectoderm development(GO:2000383) negative regulation of ectoderm development(GO:2000384)
0.0 0.0 GO:0048209 regulation of vesicle targeting, to, from or within Golgi(GO:0048209)
0.0 0.1 GO:0086023 adrenergic receptor signaling pathway involved in heart process(GO:0086023)
0.0 0.1 GO:0010992 ubiquitin homeostasis(GO:0010992)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0005916 fascia adherens(GO:0005916)
0.0 0.0 GO:0098559 cytoplasmic side of early endosome membrane(GO:0098559)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0017082 mineralocorticoid receptor activity(GO:0017082)
0.0 0.1 GO:0042030 ATPase inhibitor activity(GO:0042030)
0.0 0.0 GO:0005308 creatine transmembrane transporter activity(GO:0005308)
0.0 0.1 GO:0030292 protein tyrosine kinase inhibitor activity(GO:0030292)
0.0 0.1 GO:0043559 insulin binding(GO:0043559)