avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Cenpb | mm10_v2_chr2_-_131179985_131180092 | -0.30 | 7.4e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr10_+_95417352 Show fit | 1.91 |
ENSMUST00000181781.1
|
RIKEN cDNA 5730420D15 gene |
|
chr3_-_113291449 Show fit | 1.57 |
ENSMUST00000179568.1
|
amylase 2a4 |
|
chr1_+_171214013 Show fit | 1.47 |
ENSMUST00000111328.1
|
nuclear receptor subfamily 1, group I, member 3 |
|
chr4_-_114908892 Show fit | 1.46 |
ENSMUST00000068654.3
|
forkhead box D2 |
|
chr7_-_4789541 Show fit | 1.37 |
ENSMUST00000168578.1
|
transmembrane protein 238 |
|
chr9_+_48495345 Show fit | 1.35 |
ENSMUST00000048824.7
|
predicted gene 5617 |
|
chr1_+_171213969 Show fit | 1.22 |
ENSMUST00000005820.4
ENSMUST00000075469.5 ENSMUST00000155126.1 |
nuclear receptor subfamily 1, group I, member 3 |
|
chr6_+_48554776 Show fit | 1.22 |
ENSMUST00000114545.1
ENSMUST00000153222.1 ENSMUST00000101436.2 |
leucine rich repeat containing 61 |
|
chr10_-_95416850 Show fit | 1.21 |
ENSMUST00000020215.9
|
suppressor of cytokine signaling 2 |
|
chr10_-_95417099 Show fit | 1.18 |
ENSMUST00000135822.1
|
suppressor of cytokine signaling 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.5 | GO:0043401 | steroid hormone mediated signaling pathway(GO:0043401) |
0.1 | 2.4 | GO:0060396 | growth hormone receptor signaling pathway(GO:0060396) cellular response to growth hormone stimulus(GO:0071378) |
0.0 | 1.5 | GO:0016242 | negative regulation of macroautophagy(GO:0016242) |
0.1 | 1.0 | GO:0046415 | urate metabolic process(GO:0046415) |
0.1 | 1.0 | GO:0015937 | coenzyme A biosynthetic process(GO:0015937) |
0.1 | 0.8 | GO:0019348 | dolichol metabolic process(GO:0019348) |
0.2 | 0.7 | GO:2001160 | regulation of histone H3-K79 methylation(GO:2001160) |
0.2 | 0.7 | GO:0014916 | regulation of lung blood pressure(GO:0014916) |
0.0 | 0.7 | GO:0007205 | protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205) |
0.2 | 0.6 | GO:0002143 | tRNA wobble position uridine thiolation(GO:0002143) enzyme active site formation(GO:0018307) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.3 | GO:0030173 | integral component of Golgi membrane(GO:0030173) |
0.2 | 0.8 | GO:0033185 | dolichol-phosphate-mannose synthase complex(GO:0033185) |
0.1 | 0.5 | GO:0033256 | I-kappaB/NF-kappaB complex(GO:0033256) |
0.1 | 0.5 | GO:0016012 | sarcoglycan complex(GO:0016012) |
0.0 | 0.5 | GO:0005839 | proteasome core complex(GO:0005839) |
0.0 | 0.4 | GO:0000164 | protein phosphatase type 1 complex(GO:0000164) |
0.0 | 0.4 | GO:0017146 | NMDA selective glutamate receptor complex(GO:0017146) |
0.0 | 0.4 | GO:0032580 | Golgi cisterna membrane(GO:0032580) |
0.0 | 0.4 | GO:0034706 | sodium channel complex(GO:0034706) |
0.1 | 0.3 | GO:0020016 | ciliary pocket(GO:0020016) ciliary pocket membrane(GO:0020018) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 2.7 | GO:0004887 | thyroid hormone receptor activity(GO:0004887) |
0.5 | 2.4 | GO:0008269 | JAK pathway signal transduction adaptor activity(GO:0008269) |
0.4 | 1.6 | GO:0016971 | flavin-linked sulfhydryl oxidase activity(GO:0016971) |
0.2 | 1.6 | GO:0004556 | alpha-amylase activity(GO:0004556) |
0.3 | 1.0 | GO:0004140 | dephospho-CoA kinase activity(GO:0004140) |
0.1 | 1.0 | GO:0015143 | urate transmembrane transporter activity(GO:0015143) salt transmembrane transporter activity(GO:1901702) |
0.2 | 0.8 | GO:0004582 | dolichyl-phosphate beta-D-mannosyltransferase activity(GO:0004582) |
0.1 | 0.7 | GO:0019238 | cyclohydrolase activity(GO:0019238) |
0.1 | 0.7 | GO:0019841 | retinol binding(GO:0019841) |
0.1 | 0.6 | GO:0004792 | thiosulfate sulfurtransferase activity(GO:0004792) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.7 | PID REG GR PATHWAY | Glucocorticoid receptor regulatory network |
0.0 | 2.4 | PID IL2 1PATHWAY | IL2-mediated signaling events |
0.1 | 0.7 | ST INTERFERON GAMMA PATHWAY | Interferon gamma pathway. |
0.0 | 0.5 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
0.0 | 0.5 | PID ERBB1 INTERNALIZATION PATHWAY | Internalization of ErbB1 |
0.0 | 0.5 | PID IL12 2PATHWAY | IL12-mediated signaling events |
0.0 | 0.4 | PID EPHA FWDPATHWAY | EPHA forward signaling |
0.0 | 0.3 | SA PROGRAMMED CELL DEATH | Programmed cell death, or apoptosis, eliminates damaged or unneeded cells. |
0.0 | 0.3 | PID PRL SIGNALING EVENTS PATHWAY | Signaling events mediated by PRL |
0.0 | 0.3 | PID PDGFRA PATHWAY | PDGFR-alpha signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.1 | REACTOME GROWTH HORMONE RECEPTOR SIGNALING | Genes involved in Growth hormone receptor signaling |
0.0 | 2.7 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.1 | 1.0 | REACTOME FACILITATIVE NA INDEPENDENT GLUCOSE TRANSPORTERS | Genes involved in Facilitative Na+-independent glucose transporters |
0.1 | 1.0 | REACTOME VITAMIN B5 PANTOTHENATE METABOLISM | Genes involved in Vitamin B5 (pantothenate) metabolism |
0.0 | 0.9 | REACTOME DESTABILIZATION OF MRNA BY KSRP | Genes involved in Destabilization of mRNA by KSRP |
0.0 | 0.8 | REACTOME SYNTHESIS OF SUBSTRATES IN N GLYCAN BIOSYTHESIS | Genes involved in Synthesis of substrates in N-glycan biosythesis |
0.0 | 0.8 | REACTOME ER PHAGOSOME PATHWAY | Genes involved in ER-Phagosome pathway |
0.0 | 0.7 | REACTOME SULFUR AMINO ACID METABOLISM | Genes involved in Sulfur amino acid metabolism |
0.0 | 0.7 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.0 | 0.7 | REACTOME METABOLISM OF VITAMINS AND COFACTORS | Genes involved in Metabolism of vitamins and cofactors |