avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Cpeb1 | mm10_v2_chr7_-_81454751_81454764 | 0.14 | 4.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_-_44407703 Show fit | 5.00 |
ENSMUST00000041331.2
|
stearoyl-Coenzyme A desaturase 1 |
|
chr19_+_39287074 Show fit | 3.91 |
ENSMUST00000003137.8
|
cytochrome P450, family 2, subfamily c, polypeptide 29 |
|
chr19_-_20727533 Show fit | 3.53 |
ENSMUST00000025656.3
|
aldehyde dehydrogenase family 1, subfamily A7 |
|
chr7_-_30924169 Show fit | 3.28 |
ENSMUST00000074671.6
|
hepcidin antimicrobial peptide 2 |
|
chr4_+_60838256 Show fit | 3.09 |
ENSMUST00000098035.4
|
predicted gene, 21286 |
|
chr19_-_39463067 Show fit | 2.96 |
ENSMUST00000035488.2
|
cytochrome P450, family 2, subfamily c, polypeptide 38 |
|
chr19_+_44203265 Show fit | 2.88 |
ENSMUST00000026220.5
|
stearoyl-coenzyme A desaturase 3 |
|
chr9_-_48605147 Show fit | 2.67 |
ENSMUST00000034808.5
ENSMUST00000119426.1 |
nicotinamide N-methyltransferase |
|
chr3_+_14863495 Show fit | 2.60 |
ENSMUST00000029076.4
|
carbonic anhydrase 3 |
|
chr17_+_79626669 Show fit | 2.53 |
ENSMUST00000086570.1
|
RIKEN cDNA 4921513D11 gene |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 14.1 | GO:0019373 | epoxygenase P450 pathway(GO:0019373) |
2.0 | 7.9 | GO:1903966 | monounsaturated fatty acid metabolic process(GO:1903964) monounsaturated fatty acid biosynthetic process(GO:1903966) |
0.2 | 3.8 | GO:0042573 | retinoic acid metabolic process(GO:0042573) |
0.1 | 3.7 | GO:0018149 | peptide cross-linking(GO:0018149) |
0.8 | 3.3 | GO:0034760 | negative regulation of iron ion transport(GO:0034757) negative regulation of iron ion transmembrane transport(GO:0034760) |
0.0 | 3.1 | GO:0007608 | sensory perception of smell(GO:0007608) |
0.0 | 2.4 | GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156) |
0.6 | 2.3 | GO:0010986 | regulation of high-density lipoprotein particle clearance(GO:0010982) positive regulation of lipoprotein particle clearance(GO:0010986) |
0.4 | 2.2 | GO:2000325 | regulation of ligand-dependent nuclear receptor transcription coactivator activity(GO:2000325) positive regulation of ligand-dependent nuclear receptor transcription coactivator activity(GO:2000327) |
0.4 | 2.2 | GO:0006068 | ethanol catabolic process(GO:0006068) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.3 | GO:0030176 | integral component of endoplasmic reticulum membrane(GO:0030176) |
0.0 | 4.8 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
0.1 | 3.8 | GO:0001533 | cornified envelope(GO:0001533) |
0.1 | 2.8 | GO:0030057 | desmosome(GO:0030057) |
0.2 | 2.1 | GO:0070369 | beta-catenin-TCF7L2 complex(GO:0070369) |
0.0 | 2.1 | GO:0043034 | costamere(GO:0043034) |
0.0 | 2.0 | GO:0000502 | proteasome complex(GO:0000502) |
0.0 | 1.8 | GO:0000788 | nuclear nucleosome(GO:0000788) |
0.0 | 1.8 | GO:0043195 | terminal bouton(GO:0043195) |
0.1 | 1.7 | GO:0005847 | mRNA cleavage and polyadenylation specificity factor complex(GO:0005847) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.7 | 10.1 | GO:0034875 | oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor(GO:0033695) caffeine oxidase activity(GO:0034875) |
2.0 | 7.9 | GO:0032896 | palmitoyl-CoA 9-desaturase activity(GO:0032896) |
1.2 | 4.6 | GO:0071614 | linoleic acid epoxygenase activity(GO:0071614) |
0.2 | 4.5 | GO:0045295 | gamma-catenin binding(GO:0045295) |
1.2 | 3.5 | GO:0018479 | benzaldehyde dehydrogenase (NAD+) activity(GO:0018479) |
0.0 | 3.2 | GO:0002039 | p53 binding(GO:0002039) |
0.0 | 3.1 | GO:0004984 | olfactory receptor activity(GO:0004984) |
0.2 | 2.6 | GO:0016151 | nickel cation binding(GO:0016151) |
0.0 | 2.6 | GO:0008170 | N-methyltransferase activity(GO:0008170) |
0.1 | 2.5 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.0 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.0 | 3.3 | PID P75 NTR PATHWAY | p75(NTR)-mediated signaling |
0.0 | 1.8 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.0 | 1.7 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 1.4 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
0.0 | 1.3 | PID CDC42 PATHWAY | CDC42 signaling events |
0.0 | 1.2 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.0 | 0.9 | PID PS1 PATHWAY | Presenilin action in Notch and Wnt signaling |
0.0 | 0.9 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.0 | 0.7 | ST G ALPHA S PATHWAY | G alpha s Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.0 | REACTOME PHASE II CONJUGATION | Genes involved in Phase II conjugation |
0.1 | 2.9 | REACTOME PACKAGING OF TELOMERE ENDS | Genes involved in Packaging Of Telomere Ends |
0.0 | 2.8 | REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT | Genes involved in Lipid digestion, mobilization, and transport |
0.2 | 2.2 | REACTOME RECYCLING OF BILE ACIDS AND SALTS | Genes involved in Recycling of bile acids and salts |
0.1 | 1.9 | REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES | Genes involved in Cytosolic sulfonation of small molecules |
0.2 | 1.7 | REACTOME KERATAN SULFATE DEGRADATION | Genes involved in Keratan sulfate degradation |
0.1 | 1.7 | REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS | Genes involved in Bile salt and organic anion SLC transporters |
0.0 | 1.6 | REACTOME MEIOTIC SYNAPSIS | Genes involved in Meiotic Synapsis |
0.0 | 1.4 | REACTOME TRANSPORT OF VITAMINS NUCLEOSIDES AND RELATED MOLECULES | Genes involved in Transport of vitamins, nucleosides, and related molecules |
0.0 | 1.4 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |