avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Creb3 | mm10_v2_chr4_+_43562672_43562947 | 0.17 | 3.4e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.2 | 17.2 | GO:0090110 | cargo loading into COPII-coated vesicle(GO:0090110) |
3.3 | 9.8 | GO:0036483 | neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress(GO:0036483) regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway(GO:1903381) negative regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway(GO:1903382) |
0.2 | 8.8 | GO:0006890 | retrograde vesicle-mediated transport, Golgi to ER(GO:0006890) |
0.2 | 7.2 | GO:0002474 | antigen processing and presentation of peptide antigen via MHC class I(GO:0002474) |
1.4 | 6.8 | GO:0009115 | xanthine catabolic process(GO:0009115) |
0.2 | 6.5 | GO:0060445 | branching involved in salivary gland morphogenesis(GO:0060445) |
0.5 | 6.3 | GO:0070131 | positive regulation of mitochondrial translation(GO:0070131) |
1.5 | 6.0 | GO:0019287 | isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287) |
0.9 | 5.4 | GO:0010730 | negative regulation of hydrogen peroxide biosynthetic process(GO:0010730) |
0.4 | 5.2 | GO:0014850 | response to muscle activity(GO:0014850) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 14.5 | GO:0005777 | peroxisome(GO:0005777) microbody(GO:0042579) |
0.8 | 11.5 | GO:0030127 | COPII vesicle coat(GO:0030127) |
0.8 | 11.3 | GO:0034663 | endoplasmic reticulum chaperone complex(GO:0034663) |
0.0 | 8.1 | GO:0000139 | Golgi membrane(GO:0000139) |
1.5 | 7.5 | GO:0071256 | Sec61 translocon complex(GO:0005784) translocon complex(GO:0071256) |
0.1 | 7.5 | GO:0055037 | recycling endosome(GO:0055037) |
0.6 | 7.2 | GO:0042612 | MHC class I protein complex(GO:0042612) |
0.0 | 7.0 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
0.0 | 6.3 | GO:0005764 | lytic vacuole(GO:0000323) lysosome(GO:0005764) |
0.4 | 5.4 | GO:0044754 | autolysosome(GO:0044754) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 10.8 | GO:0020037 | heme binding(GO:0020037) |
0.2 | 9.1 | GO:0016776 | phosphotransferase activity, phosphate group as acceptor(GO:0016776) |
0.6 | 7.2 | GO:0030881 | beta-2-microglobulin binding(GO:0030881) |
1.4 | 6.8 | GO:0016623 | aldehyde oxidase activity(GO:0004031) xanthine dehydrogenase activity(GO:0004854) oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor(GO:0016623) oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726) |
0.1 | 6.2 | GO:0000149 | SNARE binding(GO:0000149) |
0.0 | 6.2 | GO:0017124 | SH3 domain binding(GO:0017124) |
0.6 | 5.7 | GO:0001594 | trace-amine receptor activity(GO:0001594) |
0.3 | 5.2 | GO:0035174 | histone serine kinase activity(GO:0035174) |
0.0 | 5.2 | GO:0030165 | PDZ domain binding(GO:0030165) |
0.1 | 5.1 | GO:0005484 | SNAP receptor activity(GO:0005484) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.0 | PID IL1 PATHWAY | IL1-mediated signaling events |
0.1 | 5.5 | PID LKB1 PATHWAY | LKB1 signaling events |
0.1 | 4.7 | PID IL12 STAT4 PATHWAY | IL12 signaling mediated by STAT4 |
0.1 | 4.2 | PID ARF 3PATHWAY | Arf1 pathway |
0.1 | 4.1 | PID P38 ALPHA BETA PATHWAY | Regulation of p38-alpha and p38-beta |
0.2 | 3.7 | PID ERB GENOMIC PATHWAY | Validated nuclear estrogen receptor beta network |
0.1 | 3.1 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 2.7 | PID ECADHERIN STABILIZATION PATHWAY | Stabilization and expansion of the E-cadherin adherens junction |
0.0 | 2.5 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.0 | 2.1 | PID AP1 PATHWAY | AP-1 transcription factor network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 11.4 | REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S | Genes involved in Activation of Chaperone Genes by XBP1(S) |
0.1 | 9.9 | REACTOME SRP DEPENDENT COTRANSLATIONAL PROTEIN TARGETING TO MEMBRANE | Genes involved in SRP-dependent cotranslational protein targeting to membrane |
0.5 | 9.1 | REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC | Genes involved in Antigen Presentation: Folding, assembly and peptide loading of class I MHC |
0.2 | 6.0 | REACTOME CHOLESTEROL BIOSYNTHESIS | Genes involved in Cholesterol biosynthesis |
0.3 | 5.2 | REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK | Genes involved in Regulation of Rheb GTPase activity by AMPK |
0.5 | 4.7 | REACTOME TRANSLOCATION OF ZAP 70 TO IMMUNOLOGICAL SYNAPSE | Genes involved in Translocation of ZAP-70 to Immunological synapse |
0.1 | 4.2 | REACTOME LYSOSOME VESICLE BIOGENESIS | Genes involved in Lysosome Vesicle Biogenesis |
0.1 | 4.0 | REACTOME RAP1 SIGNALLING | Genes involved in Rap1 signalling |
0.0 | 3.9 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.3 | 3.7 | REACTOME REGULATION OF COMPLEMENT CASCADE | Genes involved in Regulation of Complement cascade |