avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Creb3l2 | mm10_v2_chr6_-_37442095_37442154 | 0.57 | 3.0e-04 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 18.5 | GO:0015816 | glycine transport(GO:0015816) |
0.3 | 9.8 | GO:1902175 | regulation of oxidative stress-induced intrinsic apoptotic signaling pathway(GO:1902175) |
1.7 | 8.6 | GO:0000738 | DNA catabolic process, exonucleolytic(GO:0000738) |
0.1 | 8.5 | GO:0007050 | cell cycle arrest(GO:0007050) |
0.1 | 6.0 | GO:0035914 | skeletal muscle cell differentiation(GO:0035914) |
2.0 | 5.9 | GO:0006592 | ornithine biosynthetic process(GO:0006592) |
0.1 | 4.3 | GO:0000413 | protein peptidyl-prolyl isomerization(GO:0000413) |
0.0 | 4.1 | GO:0042787 | protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) |
0.7 | 3.7 | GO:2000680 | regulation of rubidium ion transport(GO:2000680) |
0.4 | 3.2 | GO:0051013 | microtubule severing(GO:0051013) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 8.6 | GO:0015030 | Cajal body(GO:0015030) |
0.9 | 3.7 | GO:0097487 | multivesicular body, internal vesicle(GO:0097487) |
0.6 | 2.9 | GO:0044194 | cytolytic granule(GO:0044194) |
0.2 | 2.9 | GO:1990023 | mitotic spindle midzone(GO:1990023) |
0.6 | 2.8 | GO:0048476 | Holliday junction resolvase complex(GO:0048476) |
0.4 | 2.6 | GO:0031428 | box C/D snoRNP complex(GO:0031428) |
0.0 | 2.6 | GO:0030672 | synaptic vesicle membrane(GO:0030672) exocytic vesicle membrane(GO:0099501) |
0.0 | 2.1 | GO:0016592 | mediator complex(GO:0016592) |
0.4 | 1.9 | GO:1990131 | Gtr1-Gtr2 GTPase complex(GO:1990131) |
0.1 | 1.9 | GO:0005666 | DNA-directed RNA polymerase III complex(GO:0005666) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.3 | 18.5 | GO:0015187 | glycine transmembrane transporter activity(GO:0015187) |
0.0 | 9.7 | GO:0005509 | calcium ion binding(GO:0005509) |
0.8 | 9.0 | GO:0031545 | peptidyl-proline 4-dioxygenase activity(GO:0031545) |
2.1 | 8.6 | GO:0008859 | exoribonuclease II activity(GO:0008859) |
2.0 | 5.9 | GO:0004349 | glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350) delta1-pyrroline-5-carboxylate synthetase activity(GO:0017084) amino acid kinase activity(GO:0019202) |
0.1 | 5.5 | GO:0005544 | calcium-dependent phospholipid binding(GO:0005544) |
0.2 | 4.2 | GO:0005528 | macrolide binding(GO:0005527) FK506 binding(GO:0005528) |
0.0 | 3.9 | GO:0001104 | RNA polymerase II transcription cofactor activity(GO:0001104) |
0.1 | 2.9 | GO:0008574 | ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574) |
0.4 | 2.8 | GO:0008821 | crossover junction endodeoxyribonuclease activity(GO:0008821) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.3 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.1 | 6.8 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
0.1 | 2.9 | SA CASPASE CASCADE | Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade. |
0.0 | 2.0 | PID FANCONI PATHWAY | Fanconi anemia pathway |
0.1 | 1.7 | ST TUMOR NECROSIS FACTOR PATHWAY | Tumor Necrosis Factor Pathway. |
0.0 | 1.3 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.0 | 1.3 | NABA COLLAGENS | Genes encoding collagen proteins |
0.1 | 1.0 | ST JAK STAT PATHWAY | Jak-STAT Pathway |
0.1 | 1.0 | PID BARD1 PATHWAY | BARD1 signaling events |
0.0 | 1.0 | PID BETA CATENIN DEG PATHWAY | Degradation of beta catenin |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 21.0 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
0.1 | 8.6 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.3 | 7.3 | REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION | Genes involved in Amino acid synthesis and interconversion (transamination) |
0.0 | 3.7 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.1 | 3.5 | REACTOME RNA POL III TRANSCRIPTION TERMINATION | Genes involved in RNA Polymerase III Transcription Termination |
0.1 | 2.9 | REACTOME INTRINSIC PATHWAY FOR APOPTOSIS | Genes involved in Intrinsic Pathway for Apoptosis |
0.0 | 2.7 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.1 | 2.5 | REACTOME GLYCOGEN BREAKDOWN GLYCOGENOLYSIS | Genes involved in Glycogen breakdown (glycogenolysis) |
0.1 | 2.5 | REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS | Genes involved in Association of TriC/CCT with target proteins during biosynthesis |
0.1 | 2.4 | REACTOME AMINE COMPOUND SLC TRANSPORTERS | Genes involved in Amine compound SLC transporters |