avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Gsc | mm10_v2_chr12_-_104473236_104473324 | 0.34 | 4.0e-02 | Click! |
Crx | mm10_v2_chr7_-_15879844_15879968 | 0.04 | 8.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_-_87141114 Show fit | 4.82 |
ENSMUST00000168889.1
|
diaphanous homolog 3 (Drosophila) |
|
chr7_-_103843154 Show fit | 4.45 |
ENSMUST00000063957.4
|
hemoglobin Z, beta-like embryonic chain |
|
chr14_-_87141206 Show fit | 4.17 |
ENSMUST00000022599.7
|
diaphanous homolog 3 (Drosophila) |
|
chr14_-_20269162 Show fit | 4.08 |
ENSMUST00000024155.7
|
potassium channel, subfamily K, member 16 |
|
chr4_-_137430517 Show fit | 3.82 |
ENSMUST00000102522.4
|
chymotrypsin-like elastase family, member 3B |
|
chr5_+_90768511 Show fit | 3.40 |
ENSMUST00000031319.6
|
pro-platelet basic protein |
|
chr6_+_113531675 Show fit | 3.33 |
ENSMUST00000036340.5
ENSMUST00000101051.2 |
Fanconi anemia, complementation group D2 |
|
chr3_-_113291449 Show fit | 3.29 |
ENSMUST00000179568.1
|
amylase 2a4 |
|
chr3_-_113324052 Show fit | 3.15 |
ENSMUST00000179314.1
|
amylase 2a3 |
|
chr13_-_4150628 Show fit | 3.10 |
ENSMUST00000110704.2
ENSMUST00000021635.7 |
aldo-keto reductase family 1, member C18 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 5.0 | GO:0030277 | maintenance of gastrointestinal epithelium(GO:0030277) |
0.6 | 4.5 | GO:0015671 | oxygen transport(GO:0015671) |
0.3 | 3.6 | GO:0016998 | cell wall macromolecule catabolic process(GO:0016998) |
0.4 | 3.5 | GO:0002553 | histamine production involved in inflammatory response(GO:0002349) histamine secretion involved in inflammatory response(GO:0002441) histamine secretion by mast cell(GO:0002553) |
0.2 | 3.4 | GO:0002523 | leukocyte migration involved in inflammatory response(GO:0002523) |
0.3 | 3.3 | GO:2000348 | regulation of CD40 signaling pathway(GO:2000348) |
0.2 | 3.2 | GO:0030322 | stabilization of membrane potential(GO:0030322) |
1.0 | 3.1 | GO:0009753 | sesquiterpenoid metabolic process(GO:0006714) response to jasmonic acid(GO:0009753) cellular response to jasmonic acid stimulus(GO:0071395) |
0.2 | 2.9 | GO:0032096 | negative regulation of response to food(GO:0032096) |
0.4 | 2.6 | GO:0042699 | follicle-stimulating hormone signaling pathway(GO:0042699) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.0 | GO:0016324 | apical plasma membrane(GO:0016324) |
0.1 | 6.9 | GO:0005834 | heterotrimeric G-protein complex(GO:0005834) |
0.6 | 4.5 | GO:0005833 | hemoglobin complex(GO:0005833) |
0.0 | 4.5 | GO:0000793 | condensed chromosome(GO:0000793) |
0.1 | 4.0 | GO:0002080 | acrosomal membrane(GO:0002080) |
0.2 | 3.2 | GO:0000940 | condensed chromosome outer kinetochore(GO:0000940) |
0.1 | 2.6 | GO:0031143 | pseudopodium(GO:0031143) |
0.0 | 2.4 | GO:0032587 | ruffle membrane(GO:0032587) |
0.0 | 2.0 | GO:0005871 | kinesin complex(GO:0005871) |
0.0 | 1.9 | GO:0005891 | voltage-gated calcium channel complex(GO:0005891) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.3 | 9.0 | GO:0004556 | alpha-amylase activity(GO:0004556) |
0.3 | 6.4 | GO:0031681 | G-protein beta-subunit binding(GO:0031681) |
0.0 | 5.0 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
1.1 | 4.5 | GO:0031721 | hemoglobin alpha binding(GO:0031721) |
0.3 | 3.6 | GO:0003796 | lysozyme activity(GO:0003796) |
0.3 | 3.5 | GO:0001609 | G-protein coupled adenosine receptor activity(GO:0001609) |
0.3 | 3.4 | GO:0045236 | CXCR chemokine receptor binding(GO:0045236) |
0.1 | 3.3 | GO:0070182 | DNA polymerase binding(GO:0070182) |
0.2 | 3.2 | GO:0022841 | potassium ion leak channel activity(GO:0022841) |
1.0 | 3.1 | GO:0047787 | 17-alpha,20-alpha-dihydroxypregn-4-en-3-one dehydrogenase activity(GO:0047006) delta4-3-oxosteroid 5beta-reductase activity(GO:0047787) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 9.2 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
0.0 | 6.3 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 3.8 | NABA MATRISOME ASSOCIATED | Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors |
0.0 | 3.5 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 3.4 | PID IL8 CXCR1 PATHWAY | IL8- and CXCR1-mediated signaling events |
0.1 | 3.3 | PID BARD1 PATHWAY | BARD1 signaling events |
0.0 | 3.3 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 2.0 | PID AR NONGENOMIC PATHWAY | Nongenotropic Androgen signaling |
0.1 | 1.7 | PID P38 MKK3 6PATHWAY | p38 MAPK signaling pathway |
0.0 | 1.5 | PID FOXM1 PATHWAY | FOXM1 transcription factor network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 11.7 | REACTOME THROMBIN SIGNALLING THROUGH PROTEINASE ACTIVATED RECEPTORS PARS | Genes involved in Thrombin signalling through proteinase activated receptors (PARs) |
0.3 | 5.9 | REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS | Genes involved in Termination of O-glycan biosynthesis |
0.1 | 4.0 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.3 | 3.8 | REACTOME TANDEM PORE DOMAIN POTASSIUM CHANNELS | Genes involved in Tandem pore domain potassium channels |
0.2 | 3.5 | REACTOME NUCLEOTIDE LIKE PURINERGIC RECEPTORS | Genes involved in Nucleotide-like (purinergic) receptors |
0.3 | 3.3 | REACTOME REGULATION OF THE FANCONI ANEMIA PATHWAY | Genes involved in Regulation of the Fanconi anemia pathway |
0.0 | 2.9 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.0 | 2.1 | REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS | Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers |
0.0 | 1.9 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.1 | 1.8 | REACTOME TRANSMISSION ACROSS CHEMICAL SYNAPSES | Genes involved in Transmission across Chemical Synapses |